+D #

  Spliceosome - Nannochloropsis gaditana

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ACommon components B Common spliceosomal components C Cap binding complex C hnRNP proteins C SR proteins C General mRNP proteins # AComplex A B U1 snRNP components C Sm proteins D NGA_0346820 SNRPD1; small nuclear ribonucleoprotein D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1 C U1 snRNP specific factors C U1 related factors B U2 snRNP components C Sm proteins D NGA_0346820 SNRPD1; small nuclear ribonucleoprotein D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1 C U2 snRNP specific factors D NGA_0232600 SNRPB2; U2 small nuclear ribonucleoprotein B'' K11094 SNRPB2; U2 small nuclear ribonucleoprotein B'' D NGA_0492700 SF3A1; splicing factor 3A subunit 1 K12825 SF3A1; splicing factor 3A subunit 1 D NGA_0471300 SF3A3; splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3 D NGA_0723920 SF3B2; splicing factor 3B subunit 2 K12829 SF3B2; splicing factor 3B subunit 2 D NGA_0723910 SF3B2; splicing factor 3B subunit 2 K12829 SF3B2; splicing factor 3B subunit 2 D NGA_0331720 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4 D NGA_0331710 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4 C U2 related factors D NGA_0191100 U2AF1; splicing factor U2AF 35 kDa subunit K12836 U2AF1; splicing factor U2AF 35 kDa subunit D NGA_0085300 retinitis pigmentosa 9 (autosomal dominant) K19604 RP9; retinitis pigmentosa 9 protein B Other components C Complex A specific factors D NGA_0334002 BUB3; cell cycle arrest protein BUB3 K02180 BUB3; cell cycle arrest protein BUB3 D NGA_0334001 BUB3; cell cycle arrest protein BUB3 K02180 BUB3; cell cycle arrest protein BUB3 D NGA_0419300 hypothetical protein K13095 SF1; splicing factor 1 # AComplex B B U1 snRNP components C Sm proteins D NGA_0346820 SNRPD1; small nuclear ribonucleoprotein D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1 C U1 snRNP specific factors C U1 related factors B U2 snRNP components C Sm proteins D NGA_0346820 SNRPD1; small nuclear ribonucleoprotein D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1 C U2 snRNP specific factors D NGA_0232600 SNRPB2; U2 small nuclear ribonucleoprotein B'' K11094 SNRPB2; U2 small nuclear ribonucleoprotein B'' D NGA_0492700 SF3A1; splicing factor 3A subunit 1 K12825 SF3A1; splicing factor 3A subunit 1 D NGA_0471300 SF3A3; splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3 D NGA_0723920 SF3B2; splicing factor 3B subunit 2 K12829 SF3B2; splicing factor 3B subunit 2 D NGA_0723910 SF3B2; splicing factor 3B subunit 2 K12829 SF3B2; splicing factor 3B subunit 2 D NGA_0331720 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4 D NGA_0331710 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4 C U2 related factors D NGA_0191100 U2AF1; splicing factor U2AF 35 kDa subunit K12836 U2AF1; splicing factor U2AF 35 kDa subunit D NGA_0085300 retinitis pigmentosa 9 (autosomal dominant) K19604 RP9; retinitis pigmentosa 9 protein B U4/U6.U5 tri-snRNP components C Sm proteins D NGA_0346820 SNRPD1; small nuclear ribonucleoprotein D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1 C LSm proteins D NGA_0181000 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 C U4/U6 snRNP specific factors D NGA_0094600 PPIH; peptidyl-prolyl isomerase H (cyclophilin H) K09567 PPIH; peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8] D NGA_0448500 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C U5 snRNP specific factors D NGA_2061700 SNRNP40; Prp8 binding protein K12857 SNRNP40; Prp8 binding protein D NGA_0168600 DDX23; ATP-dependent RNA helicase DDX23/PRP28 K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7] C U4/U6.U5 tri-snRNP specific factors C U4/U6.U5 tri-snRNP related factors D NGA_2020400 deah (asp-glu-ala-his) box polypeptide 16 K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6] D NGA_0085300 retinitis pigmentosa 9 (autosomal dominant) K19604 RP9; retinitis pigmentosa 9 protein B Other components C Prp19 complex D NGA_0587600 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D NGA_0587900 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D NGA_0167902 PLRG1; pleiotropic regulator 1 K12862 PLRG1; pleiotropic regulator 1 D NGA_0499110 CTNNBL1; beta-catenin-like protein 1 K12864 CTNNBL1; beta-catenin-like protein 1 D NGA_0449600 heat shock protein 70 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 C Prp19-related factors D NGA_0680000 SNW1; SNW domain-containing protein 1 K06063 SNW1; SNW domain-containing protein 1 D NGA_0248201 SYF1; pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1 D NGA_0248202 SYF1; pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1 D NGA_0239720 myosin light chain kinase K12868 SYF2; pre-mRNA-splicing factor SYF2 D NGA_0056602 BUD31; bud site selection protein 31 K12873 BUD31; bud site selection protein 31 D NGA_0333700 coiled-coil domain-containing protein 12 K12871 CCDC12; coiled-coil domain-containing protein 12 D NGA_0377800 RBM22; pre-mRNA-splicing factor RBM22/SLT11 K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11 C RES complex D NGA_0434700 u2 snrnp component ist3 K13107 RBMX2; RNA-binding motif protein, X-linked 2 C Complex B specific factors D NGA_0692800 smu-1 suppressor of mec-8 and unc-52-like protein K13111 SMU1; WD40 repeat-containing protein SMU1 D NGA_0334600 ubiquitin-like protein 5 K13113 UBL5; ubiquitin-like protein 5 # AComplex C B U2 snRNP components C Sm proteins D NGA_0346820 SNRPD1; small nuclear ribonucleoprotein D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1 C LSm proteins C U2 SnRNP specific factors D NGA_0232600 SNRPB2; U2 small nuclear ribonucleoprotein B'' K11094 SNRPB2; U2 small nuclear ribonucleoprotein B'' D NGA_0492700 SF3A1; splicing factor 3A subunit 1 K12825 SF3A1; splicing factor 3A subunit 1 D NGA_0471300 SF3A3; splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3 D NGA_0723920 SF3B2; splicing factor 3B subunit 2 K12829 SF3B2; splicing factor 3B subunit 2 D NGA_0723910 SF3B2; splicing factor 3B subunit 2 K12829 SF3B2; splicing factor 3B subunit 2 D NGA_0331720 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4 D NGA_0331710 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4 B U4/U6.U5 tri-snRNP components C Sm proteins D NGA_0346820 SNRPD1; small nuclear ribonucleoprotein D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1 C U5 SnRNP specific factors D NGA_2061700 SNRNP40; Prp8 binding protein K12857 SNRNP40; Prp8 binding protein D NGA_0168600 DDX23; ATP-dependent RNA helicase DDX23/PRP28 K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7] C U4/U6.U5 tri-SnRNP specific factors C U4/U6.U5 tri-SnRNP related factors D NGA_2020400 deah (asp-glu-ala-his) box polypeptide 16 K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6] D NGA_0085300 retinitis pigmentosa 9 (autosomal dominant) K19604 RP9; retinitis pigmentosa 9 protein B Other components C Prp19-CDC5 complex D NGA_0587600 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D NGA_0587900 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D NGA_0499110 CTNNBL1; beta-catenin-like protein 1 K12864 CTNNBL1; beta-catenin-like protein 1 D NGA_0167902 PLRG1; pleiotropic regulator 1 K12862 PLRG1; pleiotropic regulator 1 D NGA_0449600 heat shock protein 70 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 C Prp19-related factors D NGA_0680000 SNW1; SNW domain-containing protein 1 K06063 SNW1; SNW domain-containing protein 1 D NGA_0248201 SYF1; pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1 D NGA_0248202 SYF1; pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1 D NGA_0239720 myosin light chain kinase K12868 SYF2; pre-mRNA-splicing factor SYF2 D NGA_0056602 BUD31; bud site selection protein 31 K12873 BUD31; bud site selection protein 31 D NGA_0333700 coiled-coil domain-containing protein 12 K12871 CCDC12; coiled-coil domain-containing protein 12 D NGA_0377800 RBM22; pre-mRNA-splicing factor RBM22/SLT11 K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11 C RES complex D NGA_0434700 u2 snrnp component ist3 K13107 RBMX2; RNA-binding motif protein, X-linked 2 C EJC/TREX D NGA_0049302 MAGOH; protein mago nashi K12877 MAGOH; protein mago nashi D NGA_0098800 rna-binding protein 8a K12876 RBM8A; RNA-binding protein 8A C Step II factors D NGA_0640100 CDC40; pre-mRNA-processing factor 17 K12816 CDC40; pre-mRNA-processing factor 17 D NGA_0446101 deah (asp-glu-ala-his) box polypeptide 35 K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6] D NGA_2007900 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 K12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6] C PPlases C hnRNP proteins D NGA_0169420 rna binding protein K12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F/H D NGA_0169410 rna binding protein K12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F/H C Complex C specific factors D NGA_2046600 g patch domain-containing protein 1 K13123 GPATCH1; G patch domain-containing protein 1 D NGA_0474300 mitogen-activated protein kinase K13124 MORG1; mitogen-activated protein kinase organizer 1 D NGA_0402100 nitric oxide synthase interacting protein K13125 NOSIP; nitric oxide synthase-interacting protein # AOther splicing related proteins B Proteins involved in snRNP biogenesis C SMN complex factors C Integrator complex C Other proteins involved in snRNP biogenesis B Minor spliceosome components C Minor spliceosome specific factors C Minor spliceosome associated proteins B Spliceosome associated proteins (SAPs) C hnRNP proteins C SR proteins C SR-related proteins C TREX complex C RNA helicase-like proteins C RNA binding proteins (RBPs) C Other SAPs D NGA_0166900 kh domain protein K13210 FUBP; far upstream element-binding protein D NGA_0401010 hypothetical protein K13210 FUBP; far upstream element-binding protein D NGA_0049402 PPP1C; protein phosphatase 1, catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D NGA_0353600 serine threonine-protein phosphatase pp1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D NGA_2015400 PRMT5; protein arginine N-methyltransferase 5 K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320] D NGA_0462400 hypothetical protein K08827 PRPF4B; serine/threonine-protein kinase PRP4 [EC:2.7.11.1] D NGA_0680100 hypothetical protein K08827 PRPF4B; serine/threonine-protein kinase PRP4 [EC:2.7.11.1] D NGA_2100000 ania-6a type cyclin K23966 CCNL; cyclin L # ASplicing related RNAs ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 15, 2024