+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Nannospalax galili (Upper Galilee mountains blind mole rat)

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs D 103750749 Fbl; fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 103731737 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 103751136 Nop56; NOP56 ribonucleoprotein K14564 NOP56; nucleolar protein 56 D 103736025 Nop58; NOP58 ribonucleoprotein K14565 NOP58; nucleolar protein 58 D 103743470 Snu13; SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D 103741287 Dkc1; dyskerin pseudouridine synthase 1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 103742408 Gar1; GAR1 ribonucleoprotein K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D 103729918 Nhp2; NHP2 ribonucleoprotein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D 103740501 Nop10; NOP10 ribonucleoprotein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D 103745800 Naf1; nuclear assembly factor 1 ribonucleoprotein K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 D 103732877 Shq1; SHQ1, H/ACA ribonucleoprotein assembly factor K14764 SHQ1; protein SHQ1 B 90S particles C U3 small nucleolar RNA-associated proteins D 103743534 Imp3; IMP3, U3 small nucleolar ribonucleoprotein K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D 103744677 Imp4; IMP4 homolog, U3 small nucleolar ribonucleoprotein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D 103748073 Mphosph10; M-phase phosphoprotein 10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 103739452 Ngdn; neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D 103743447 Rrp7a; ribosomal RNA processing 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7 D 103729349 Pwp2; PWP2 periodic tryptophan protein homolog (yeast) K14558 PWP2; periodic tryptophan protein 2 D 103741149 Nop14; NOP14 nucleolar protein K14766 NOP14; nucleolar protein 14 D 103731034 Utp3; UTP3, small subunit processome component homolog (S. cerevisiae) K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D 103734791 Utp4; UTP4, small subunit processome component K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D 103744646 Wdr43; WD repeat domain 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 103724512 Utp6; UTP6, small subunit processome component K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D 103739708 Wdr46; WD repeat domain 46 K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D 103746793 Heatr1; HEAT repeat containing 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D 103747704 Utp11; UTP11, small subunit processome component homolog (S. cerevisiae) K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D 103733997 Wdr3; WD repeat domain 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D 103752442 Tbl3; transducin beta like 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D 103728752 Utp14a; UTP14A small subunit processome component K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 103738452 Utp15; UTP15, small subunit processome component K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D 103736174 Wdr75; WD repeat domain 75 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D 103738407 Utp18; UTP18, small subunit processome component K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D 103750604 Noc4l; nucleolar complex associated 4 homolog K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D 103733736 Utp20; UTP20, small subunit processome component K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 103752282 Wdr36; WD repeat domain 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D 103741585 Nol6; nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D 103738130 Utp23; UTP23, small subunit processome component K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D 103747356 Fcf1; FCF1 rRNA-processing protein K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D 103727032 Diexf; digestive organ expansion factor homolog (zebrafish) K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D 103731569 Rsl1d1; ribosomal L1 domain containing 1 K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D 103731338 Ddx10; DEAD-box helicase 10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D 103740721 Ddx18; DEAD-box helicase 18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 103737645 Ddx47; DEAD-box helicase 47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D 103726851 Ddx49; DEAD-box helicase 49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 103746034 Ddx52; DExD-box helicase 52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D 103737503 Dhx15; DEAH-box helicase 15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 103739009 Dhx37; DEAH-box helicase 37 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D 103730586 Eif4a3; eukaryotic translation initiation factor 4A3 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D 103733807 Bms1; BMS1, ribosome biogenesis factor K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D 103736220 Drosha; drosha ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D 103742810 Rexo4; REX4 homolog, 3'-5' exonuclease K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 103737605 Dbr1; debranching RNA lariats 1 K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D 103735565 Csnk2a2; casein kinase 2 alpha 2 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 103751629 Csnk2a1; casein kinase 2 alpha 1 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 103724441 Csnk2b; casein kinase 2 beta K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D 103732643 Aatf; apoptosis antagonizing transcription factor K14782 AATF; protein AATF/BFR2 D 103727489 Emg1; EMG1, N1-specific pseudouridine methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 103733088 Abt1; activator of basal transcription 1 K14785 ESF2; ESF2/ABP1 family protein D 103747557 Kri1; KRI1 homolog K14786 KRI1; protein KRI1 D 103742324 Krr1; KRR1, small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 103745535 Rbm19; RNA binding motif protein 19 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D 103749492 Nat10; N-acetyltransferase 10 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 103738165 nucleolin-like K11294 NCL; nucleolin D 103738209 Ncl; nucleolin K11294 NCL; nucleolin D 103747613 Nol10; nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2 D 103739414 Nop9; NOP9 nucleolar protein K14790 NOP9; nucleolar protein 9 D 103729981 Pinx1; PIN2/TERF1 interacting, telomerase inhibitor 1 K11135 PINX1; Pin2-interacting protein X1 D 103742116 Pwp1; PWP1 homolog, endonuclein K14791 PWP1; periodic tryptophan protein 1 D 103740980 Rcl1; RNA terminal phosphate cyclase like 1 K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D 103744040 Pdcd11; programmed cell death 11 K14792 RRP5; rRNA biogenesis protein RRP5 D 103747352 Rrp9; ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) K14793 RRP9; ribosomal RNA-processing protein 9 D 103733204 Rrp12; ribosomal RNA processing 12 homolog K14794 RRP12; ribosomal RNA-processing protein 12 D 103747081 Tcof1; treacle ribosome biogenesis factor 1 K14562 TCOF1; Treacher Collins syndrome protein D 103748766 Dcaf13; DDB1 and CUL4 associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D 103732909 Riok1; RIO kinase 1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D 103732020 Riok2; RIO kinase 2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D 103752499 Dimt1; DIM1 dimethyladenosine transferase 1 homolog K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 103746257 Wbscr22; Williams-Beuren syndrome chromosome region 22 K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D 103737978 Mettl5; methyltransferase like 5 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5 D 103725883 Bysl; bystin like K14797 ENP1; essential nuclear protein 1 D 103731472 Ltv1; LTV1 ribosome biogenesis factor K14798 LTV1; protein LTV1 D 103734683 Nob1; NIN1/PSMD8 binding protein 1 homolog K11883 NOB1; RNA-binding protein NOB1 D 103734747 Pno1; partner of NOB1 homolog K11884 PNO1; RNA-binding protein PNO1 D 103750614 Ran; RAN, member RAS oncogene family K07936 RAN; GTP-binding nuclear protein Ran D 103738724 Ak6; adenylate kinase 6 K18532 AK6; adenylate kinase [EC:2.7.4.3] D 103730529 Tsr1; TSR1, ribosome maturation factor K14799 TSR1; pre-rRNA-processing protein TSR1 D 103738659 Tsr2; TSR2, ribosome maturation factor K14800 TSR2; pre-rRNA-processing protein TSR2 D 103752416 Tsr3; TSR3, acp transferase ribosome maturation factor K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 103739169 Pdcd2l; programmed cell death 2 like K14801 TSR4; pre-rRNA-processing protein TSR4 D 103742348 Pdcd2; programmed cell death 2 K14801 TSR4; pre-rRNA-processing protein TSR4 D 103748562 Rps19bp1; ribosomal protein S19 binding protein 1 K26536 RPS19BP1; active regulator of SIRT1 D 103743249 Xpo1; exportin 1 K14290 XPO1; exportin-1 D 103738323 Kpnb1; karyopherin subunit beta 1 K14293 KPNB1; importin subunit beta-1 D 103738459 Tnpo1; transportin 1 K18752 TNPO1; transportin-1 D 103739432 Ipo4; importin 4 K20221 IPO4; importin-4 D 103726153 Ipo5; importin 5 K20222 IPO5; importin-5 D 103750396 Ipo7; importin 7 K20223 IPO7; importin-7 D 103731824 Ipo9; importin 9 K20224 IPO9; importin-9 C Other pre-40S particles D 103729228 Atp8a1; ATPase phospholipid transporting 8A1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 103727177 Atp8a2; ATPase phospholipid transporting 8A2 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 103746850 Eif3j; eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J D 103729408 Abce1; ATP binding cassette subfamily E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D 103740926 Ddx5; DEAD-box helicase 5 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 103740721 Ddx18; DEAD-box helicase 18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 103733754 Ddx21; DExD-box helicase 21 K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 103740137 ATP-dependent RNA helicase DDX24-like K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 103724579 Ddx24; DEAD-box helicase 24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 103735551 Ddx27; DEAD-box helicase 27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D 103742840 Ddx31; DEAD-box helicase 31 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D 103750605 Ddx51; DEAD-box helicase 51 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D 103745551 Ddx54; DEAD-box helicase 54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D 103739025 Ddx55; DEAD-box helicase 55 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 103734987 Ddx56; DEAD-box helicase 56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D 103739917 Skiv2l2; Ski2 like RNA helicase 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D 103738661 Gnl3l; G protein nucleolar 3 like K14538 NUG1; nuclear GTP-binding protein D 103749010 Gnl3; G protein nucleolar 3 K14538 NUG1; nuclear GTP-binding protein D 103747690 Gnl2; G protein nucleolar 2 K14537 NUG2; nuclear GTP-binding protein D 103740666 Gtpbp4; GTP binding protein 4 K06943 NOG1; nucleolar GTP-binding protein D 103738862 Lsg1; large 60S subunit nuclear export GTPase 1 K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 103743217 Efl1; elongation factor like GTPase 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D 103729029 Rexo2; RNA exonuclease 2 K13288 orn; oligoribonuclease [EC:3.1.-.-] D 103737312 Rexo1; RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 103742757 putative RNA exonuclease NEF-sp K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 103745212 putative exonuclease GOR K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 103752522 Xrn1; 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D 103740603 Xrn2; 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D RNase MRP E 103732821 Pop1; POP1 homolog, ribonuclease P/MRP subunit K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E 103740874 Pop4; POP4 homolog, ribonuclease P/MRP subunit K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E 103740075 Pop5; POP5 homolog, ribonuclease P/MRP subunit K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E 103747257 Rpp30; ribonuclease P/MRP subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] E 103733507 Pop7; POP7 homolog, ribonuclease P/MRP subunit K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5] E 103736884 Rpp25; ribonuclease P/MRP subunit p25 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 103741567 Rpp25l; ribonuclease P/MRP subunit p25 like K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 103735181 Rpp38; ribonuclease P/MRP subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5] E 103732921 Rpp40; ribonuclease P/MRP subunit p40 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] C Kinases D 103725151 Nol9; nucleolar protein 9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D 103745315 Abcf2; ATP binding cassette subfamily F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D 103735929 Dnajc21; DnaJ heat shock protein family (Hsp40) member C21 K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 103740183 Eif6; eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D 103745996 heat shock 70 kDa protein 1B-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 103746770 Hspa6; heat shock protein family A (Hsp70) member 6 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 103727922 Hspa8; heat shock protein family A (Hsp70) member 8 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 103724426 Hspa1l; heat shock protein family A (Hsp70) member 1 like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 103749270 Hspa2; heat shock protein family A (Hsp70) member 2 K26598 HSPA2; heat shock 70kDa protein 2 D 103724712 Mrto4; MRT4 homolog, ribosome maturation factor K14815 MRT4; mRNA turnover protein 4 D 103739746 Nmd3; NMD3 ribosome export adaptor K07562 NMD3; 60S ribosomal export protein NMD3 D 103737663 Nxf1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor D 103733667 Nxf3; nuclear RNA export factor 3 K14284 NXF; nuclear RNA export factor D 103746221 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor D 103724746 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor D 103724751 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor D 103737360 Nxt1; nuclear transport factor 2 like export factor 1 K14285 NXT1_2; NTF2-related export protein 1/2 D 103750025 Nxt2; nuclear transport factor 2 like export factor 2 K14285 NXT1_2; NTF2-related export protein 1/2 D 103750614 Ran; RAN, member RAS oncogene family K07936 RAN; GTP-binding nuclear protein Ran D 103724638 Znf622; zinc finger protein 622 K14816 REI1; pre-60S factor REI1 D 103738939 Sbds; SBDS ribosome assembly guanine nucleotide exchange factor K14574 SDO1; ribosome maturation protein SDO1 D 103746945 Spata5; spermatogenesis associated 5 K14575 AFG2; AAA family ATPase D 103746966 Spata5l1; spermatogenesis associated 5 like 1 K26051 SPATA5L1; ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10] D 103727626 Cinp; cyclin dependent kinase 2 interacting protein K26052 CINP; cyclin-dependent kinase 2-interacting protein D 103747692 CUNH1orf109; chromosome unknown C1orf109 homolog K26053 C1ORF109; ribosome biogenesis protein C1orf109 D 103743249 Xpo1; exportin 1 K14290 XPO1; exportin-1 D 103738323 Kpnb1; karyopherin subunit beta 1 K14293 KPNB1; importin subunit beta-1 D 103738459 Tnpo1; transportin 1 K18752 TNPO1; transportin-1 D 103739432 Ipo4; importin 4 K20221 IPO4; importin-4 D 103726153 Ipo5; importin 5 K20222 IPO5; importin-5 D 103750396 Ipo7; importin 7 K20223 IPO7; importin-7 D 103731824 Ipo9; importin 9 K20224 IPO9; importin-9 D 103746776 Dusp12; dual specificity phosphatase 12 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D 103749087 Tex10; testis expressed 10 K14827 IPI1; pre-rRNA-processing protein IPI1 D 103737350 Wdr18; WD repeat domain 18 K14829 IPI3; pre-rRNA-processing protein IPI3 D 103743135 Las1l; LAS1 like, ribosome biogenesis factor K16912 LAS1; ribosomal biogenesis protein LAS1 D 103752181 Pelp1; proline, glutamate and leucine rich protein 1 K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1 D 103752125 Senp3; SUMO1/sentrin/SMT3 specific peptidase 3 K08593 SENP3; sentrin-specific protease 3 [EC:3.4.22.68] C Ribosome quality control proteins D 103736508 Ltn1; listerin E3 ubiquitin protein ligase 1 K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 103741390 Tcf25; transcription factor 25 K24970 TCF25; transcription factor 25 D 103731520 Nemf; nuclear export mediator factor K24971 NEMF; nuclear export mediator factor NEMF D 103741554 Vcp; valosin containing protein K13525 VCP; transitional endoplasmic reticulum ATPase D 103730366 Nploc4; NPL4 homolog, ubiquitin recognition factor K14015 NPLOC4; nuclear protein localization protein 4 D 103742066 Ufd1l; ubiquitin fusion degradation 1 like (yeast) K14016 UFD1; ubiquitin fusion degradation protein 1 D 103746467 Ptrhd1; peptidyl-tRNA hydrolase domain containing 1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29] D 103727747 Ankzf1; ankyrin repeat and zinc finger domain containing 1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D 103735950 Brix1; BRX1, biogenesis of ribosomes K14820 BRX1; ribosome biogenesis protein BRX1 D 103737107 Znf593; zinc finger protein 593 K14821 BUD20; bud site selection protein 20 D 103740165 Ccdc86; coiled-coil domain containing 86 K14822 CGR1; rRNA-processing protein CGR1 D 103743847 Ebna1bp2; EBNA1 binding protein 2 K14823 EBP2; rRNA-processing protein EBP2 D 103735260 Bop1; block of proliferation 1 K14824 ERB1; ribosome biogenesis protein ERB1 D 103728844 Tmed5; transmembrane p24 trafficking protein 5 K14825 TMED5; p24 family protein gamma-2 D 103732896 Pak1ip1; PAK1 interacting protein 1 K14830 MAK11; protein MAK11 D 103743574 Mak16; MAK16 homolog K14831 MAK16; protein MAK16 D 103725271 Cebpz; CCAAT/enhancer binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21 D 103751152 Mdn1; midasin AAA ATPase 1 K14572 MDN1; midasin D 103734753 Nip7; NIP7, nucleolar pre-rRNA processing protein K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 103749720 Noc2l; NOC2 like nucleolar associated transcriptional repressor K14833 NOC2; nucleolar complex protein 2 D 103750130 Noc3l; NOC3 like DNA replication regulator K14834 NOC3; nucleolar complex protein 3 D 103727521 Nop2; NOP2 nucleolar protein K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D 103744566 Rbm28; RNA binding motif protein 28 K14573 NOP4; nucleolar protein 4 D 103749999 Nol8; nucleolar protein 8 K14836 NOP8; nucleolar protein 8 D 103745121 Rbm34; RNA binding motif protein 34 K14837 NOP12; nucleolar protein 12 D 103732308 Nifk; nucleolar protein interacting with the FHA domain of MKI67 K14838 NOP15; nucleolar protein 15 D 103725014 Gltscr2; glioma tumor suppressor candidate region gene 2 K14840 NOP53; nucleolar protein 53 D 103737660 Wdr74; WD repeat domain 74 K14841 NSA1; ribosome biogenesis protein NSA1 D 103731352 Nsa2; NSA2, ribosome biogenesis homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 103740442 Pes1; pescadillo ribosomal biogenesis factor 1 K14843 PES1; pescadillo D 103740990 Pum3; pumilio RNA binding family member 3 K14844 PUF6; pumilio homology domain family member 6 D 103742116 Pwp1; PWP1 homolog, endonuclein K14791 PWP1; periodic tryptophan protein 1 D 103724418 Dxo; decapping exoribonuclease K14845 RAI1; RAT1-interacting protein D 103747411 Riox1; ribosomal oxygenase 1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69] D 103741044 Riox2; ribosomal oxygenase 2 K21760 RIOX2; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine9 demethylase [EC:1.14.11.79 1.14.11.66] D 103726251 Nvl; nuclear VCP-like K14571 RIX7; ribosome biogenesis ATPase D 103728100 Rpf1; ribosome production factor 1 homolog K14846 RPF1; ribosome production factor 1 D 103749541 Rpf2; ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2 D 103743612 Grwd1; glutamate rich WD repeat containing 1 K14848 RRB1; ribosome assembly protein RRB1 D 103729342 Rrp1b; ribosomal RNA processing 1B K14849 RRP1; ribosomal RNA-processing protein 1 D 103729345 Rrp1; ribosomal RNA processing 1 K14849 RRP1; ribosomal RNA-processing protein 1 D 103737568 Rrp8; ribosomal RNA processing 8, methyltransferase, homolog (yeast) K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D 103733204 Rrp12; ribosomal RNA processing 12 homolog K14794 RRP12; ribosomal RNA-processing protein 12 D 103748606 Nol12; nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17 D 103751368 Rrs1; ribosome biogenesis regulator homolog K14852 RRS1; regulator of ribosome biosynthesis D 103746061 Nle1; notchless homolog 1 K14855 RSA4; ribosome assembly protein 4 D 103742444 Sdad1; SDA1 domain containing 1 K14856 SDA1; protein SDA1 D 103744752 Ftsj3; FtsJ homolog 3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 103747575 suppressor of SWI4 1 homolog K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D 103745797 Tma16; translation machinery associated 16 homolog K14860 TMA16; translation machinery-associated protein 16 D 103736467 Urb1; URB1 ribosome biogenesis 1 homolog (S. cerevisiae) K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D 103744118 Urb2; URB2 ribosome biogenesis 2 homolog (S. cerevisiae) K14862 URB2; nucleolar pre-ribosomal-associated protein 2 D 103736029 Wdr12; WD repeat domain 12 K14863 WDR12; ribosome biogenesis protein D 103729597 Nufip1; NUFIP1, FMR1 interacting protein 1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 D 103732568 Znhit3; zinc finger HIT-type containing 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C 103744256 Bccip; BRCA2 and CDKN1A interacting protein K15262 BCP1; protein BCP1 C 103734222 Lyar; Ly1 antibody reactive K15263 LYER; cell growth-regulating nucleolar protein C 103730313 Nsun4; NOP2/Sun RNA methyltransferase family member 4 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] C 103746246 Nsun5; NOP2/Sun RNA methyltransferase family member 5 K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C 103739064 Tfb1m; transcription factor B1, mitochondrial K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-] C 103732614 Mrm1; mitochondrial rRNA methyltransferase 1 K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 103751162 Bmt2; base methyltransferase of 25S rRNA 2 homolog K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] C 103730494 Mrm3; mitochondrial rRNA methyltransferase 3 K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-] C 103737510 Zcchc4; zinc finger CCHC-type containing 4 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-] C 103735598 probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7] C 103738872 Ddx28; DEAD-box helicase 28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7] C 103752214 Dhx33; DEAH-box helicase 33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6] C 103744527 Ighmbp2; immunoglobulin mu binding protein 2 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] C 103749936 Isg20; interferon stimulated exonuclease gene 20 K12579 ISG20; interferon-stimulated gene 20 kDa protein [EC:3.1.13.1] C 103750320 Isg20l2; interferon stimulated exonuclease gene 20 like 2 K18329 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 [EC:3.1.-.-] C 103741037 Kdm8; lysine demethylase 8 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-] C 103728777 Phf6; PHD finger protein 6 K23310 PHF6; PHD finger protein 6 C 103746054 Slfn14; schlafen family member 14 K24445 SLFN14; protein SLFN14 [EC:3.1.-.-] C 103730467 Eral1; Era like 12S mitochondrial rRNA chaperone 1 K03595 era; GTPase C 103742133 CUNH12orf45; chromosome unknown C12orf45 homolog K26142 NOPCHAP1; NOP protein chaperone 1 C 103746502 Pa2g4; proliferation-associated 2G4 K26736 PA2G4; ERBB-3 binding protein C 103725842 Mtg1; mitochondrial ribosome associated GTPase 1 K19828 MTG1; mitochondrial GTPase 1 C 103742232 Mtg2; mitochondrial ribosome associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] C 103734372 Noa1; nitric oxide associated 1 K19832 NOA1; nitric oxide-associated protein 1 # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D 103751136 Nop56; NOP56 ribonucleoprotein K14564 NOP56; nucleolar protein 56 D 103742805 Rpl7a; ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D 103741287 Dkc1; dyskerin pseudouridine synthase 1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 103740501 Nop10; NOP10 ribonucleoprotein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors D 103748679 Mrm2; mitochondrial rRNA methyltransferase 2 K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors B rRNA processing factors C 103736220 Drosha; drosha ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] B rRNA helicases B GTPases C 103730467 Eral1; Era like 12S mitochondrial rRNA chaperone 1 K03595 era; GTPase C 103742232 Mtg2; mitochondrial ribosome associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C 103747715 Yrdc; yrdC N6-threonylcarbamoyltransferase domain containing K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024