+F Repair protein KO #

  DNA Repair and Recombination Proteins - Naegleria gruberi

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D NAEGRDRAFT_63689 hypothetical protein K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33] D NAEGRDRAFT_74647 dead box RNA helicase K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4] C BER (base exicision repair) D DNA glycosylases E NAEGRDRAFT_33170 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E NAEGRDRAFT_52318 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E NAEGRDRAFT_63944 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] E NAEGRDRAFT_70374 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E NAEGRDRAFT_58770 endonuclease K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] D Long Patch-BER factors E DNA polymerase delta complex F NAEGRDRAFT_44642 hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] F NAEGRDRAFT_71662 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2 E DNA polymerase epsilon complex F NAEGRDRAFT_59151 hypothetical protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] F NAEGRDRAFT_63811 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] F NAEGRDRAFT_53490 hypothetical protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] E NAEGRDRAFT_66232 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen E NAEGRDRAFT_35238 PCNA proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen E NAEGRDRAFT_44329 hypothetical protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Short Patch-BER factors E NAEGRDRAFT_47730 BRCT domain-containing protein K10803 XRCC1; DNA-repair protein XRCC1 D Other BER factors E NAEGRDRAFT_62335 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] E NAEGRDRAFT_70759 hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78] E NAEGRDRAFT_72319 hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78] E NAEGRDRAFT_62711 hypothetical protein K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-] E NAEGRDRAFT_58866 poly(ADP-ribose) synthetase K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30] E NAEGRDRAFT_71853 poly(ADP-ribose) polymerase K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30] C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex F NAEGRDRAFT_78097 rad23 protein K10839 RAD23; UV excision repair protein RAD23 E Cul4-DDB2 complex F NAEGRDRAFT_5552 hypothetical protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F NAEGRDRAFT_31512 hypothetical protein K10609 CUL4; cullin 4 F NAEGRDRAFT_82942 damage-specific DNA binding protein 1 K10610 DDB1; DNA damage-binding protein 1 E NER4 complex F NAEGRDRAFT_30559 hypothetical protein K15083 RAD16; DNA repair protein RAD16 D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex F NAEGRDRAFT_51024 RNA polymerase II K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] F NAEGRDRAFT_58671 RNA polymerase II largest subunit K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] F NAEGRDRAFT_59892 DNA-directed RNA polymerase II K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] F NAEGRDRAFT_61034 hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 F NAEGRDRAFT_64024 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 F NAEGRDRAFT_29724 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 F NAEGRDRAFT_33993 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 F NAEGRDRAFT_74650 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 F NAEGRDRAFT_71611 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 F NAEGRDRAFT_72143 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 F NAEGRDRAFT_88233 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 F NAEGRDRAFT_29567 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 F NAEGRDRAFT_61926 hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 E Cul4-CSA complex F NAEGRDRAFT_5552 hypothetical protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F NAEGRDRAFT_31512 hypothetical protein K10609 CUL4; cullin 4 F NAEGRDRAFT_82942 damage-specific DNA binding protein 1 K10610 DDB1; DNA damage-binding protein 1 E Other TCR factor F NAEGRDRAFT_82093 DEAD/DEAH box helicase K10841 ERCC6; DNA excision repair protein ERCC-6 F NAEGRDRAFT_79089 hypothetical protein K25829 ELOF1; transcription elongation factor 1 D TFIIH complex E NAEGRDRAFT_50960 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E NAEGRDRAFT_29347 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E NAEGRDRAFT_80698 DNA repair helicase UVH6 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E NAEGRDRAFT_61113 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 E NAEGRDRAFT_34964 RNA polymerase II transcription factor TFIIH subunit K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 E NAEGRDRAFT_68603 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E NAEGRDRAFT_68362 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E NAEGRDRAFT_2502 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E NAEGRDRAFT_50931 cyclin box fold domain-containing protein K06634 CCNH; cyclin H D RPA (replication factor A) E NAEGRDRAFT_78091 single-stranded DNA-binding replication protein A large subunit K07466 RFA1; replication factor A1 E NAEGRDRAFT_81289 hypothetical protein K10739 RFA2; replication factor A2 D Other NER factors E NAEGRDRAFT_54247 hypothetical protein K10849 ERCC1; DNA excision repair protein ERCC-1 E NAEGRDRAFT_62722 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] E NAEGRDRAFT_62721 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] E NAEGRDRAFT_48232 hypothetical protein K10846 ERCC5; DNA excision repair protein ERCC-5 E NAEGRDRAFT_65978 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19 E NAEGRDRAFT_31990 hypothetical protein K03869 CUL3; cullin 3 E NAEGRDRAFT_81967 hypothetical protein K03869 CUL3; cullin 3 E NAEGRDRAFT_78770 cullin K03869 CUL3; cullin 3 C MMR (mismatch excision repair) D Mismatch and loop recognition factors E NAEGRDRAFT_34984 DNA mismatch repair protein muts K08735 MSH2; DNA mismatch repair protein MSH2 E NAEGRDRAFT_78068 DNA mismatch repair protein msh6 K08737 MSH6; DNA mismatch repair protein MSH6 D MutL homologs E NAEGRDRAFT_81389 hypothetical protein K08734 MLH1; DNA mismatch repair protein MLH1 D DNA polymerase delta complex E NAEGRDRAFT_44642 hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] E NAEGRDRAFT_71662 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2 D RPA (replication factor A) E NAEGRDRAFT_78091 single-stranded DNA-binding replication protein A large subunit K07466 RFA1; replication factor A1 E NAEGRDRAFT_81289 hypothetical protein K10739 RFA2; replication factor A2 D RFC (replication factor C) E NAEGRDRAFT_66154 replication factor C large subunit K10754 RFC1; replication factor C subunit 1 E NAEGRDRAFT_68675 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 E NAEGRDRAFT_44707 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 E NAEGRDRAFT_29498 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 E NAEGRDRAFT_29162 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 D Other MMR factors E NAEGRDRAFT_66232 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen E NAEGRDRAFT_35238 PCNA proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen E NAEGRDRAFT_30993 hypothetical protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-] B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex E NAEGRDRAFT_58924 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11 D BRCA1-core complex D BRCA1-A complex E NAEGRDRAFT_69708 hypothetical protein K12173 BRE; BRCA1-A complex subunit BRE E NAEGRDRAFT_3574 hypothetical protein K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-] D BRCA1-B complex E NAEGRDRAFT_61854 AM39; hypothetical protein K10728 TOPBP1; topoisomerase (DNA) II binding protein 1 D BRCA1-C complex E NAEGRDRAFT_58924 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11 D BRCA complex E NAEGRDRAFT_45350 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein D RecA family proteins E NAEGRDRAFT_45247 hypothetical protein K10871 RAD51L3; RAD51-like protein 3 D Rad52 family proteins E NAEGRDRAFT_59017 Rad52/22 domain-containing protein K10873 RAD52; DNA repair and recombination protein RAD52 D Rad54 family proteins E NAEGRDRAFT_70927 hypothetical protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-] D RecQ family DNA helicases E NAEGRDRAFT_32708 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4] E NAEGRDRAFT_29370 hypothetical protein K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4] D Bloom's syndrome complex (BTR) E NAEGRDRAFT_32708 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4] E NAEGRDRAFT_81118 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] D RPA (replication factor A) E NAEGRDRAFT_78091 single-stranded DNA-binding replication protein A large subunit K07466 RFA1; replication factor A1 E NAEGRDRAFT_81289 hypothetical protein K10739 RFA2; replication factor A2 D Protein phosphatase 4 E NAEGRDRAFT_55855 hypothetical protein K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16] E NAEGRDRAFT_36700 hypothetical protein K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1 E NAEGRDRAFT_81298 EVH1 domain-containing protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3 E NAEGRDRAFT_50227 hypothetical protein K15426 PPP4R4; serine/threonine-protein phosphatase 4 regulatory subunit 4 D AP-5 complex E NAEGRDRAFT_79617 hypothetical protein K19023 AP5M1; AP-5 complex subunit mu-1 D SMC5-SMC6 complex E NAEGRDRAFT_58473 structural maintenance of chromosome 5 K22803 SMC5; structural maintenance of chromosomes protein 5 E NAEGRDRAFT_63029 non-SMC element 1 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27] E NAEGRDRAFT_52672 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] E NAEGRDRAFT_49519 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] E NAEGRDRAFT_78941 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4 D Other HR factors E NAEGRDRAFT_68365 hypothetical protein K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1] E NAEGRDRAFT_48155 hypothetical protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-] E NAEGRDRAFT_78187 hypothetical protein K19026 SPG11; spatacsin E NAEGRDRAFT_52233 hypothetical protein K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26 E NAEGRDRAFT_53887 hypothetical protein K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E NAEGRDRAFT_83257 hypothetical protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-] E NAEGRDRAFT_51149 hypothetical protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-] E NAEGRDRAFT_3410 hypothetical protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-] E NAEGRDRAFT_74042 hypothetical protein K23456 CFAP410; cilla- and flagella-associated protein C NHEJ (non-homologous end-joining) D DNA-PK complex E NAEGRDRAFT_76609 hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1 E NAEGRDRAFT_81256 Ku70/Ku80 beta-barrel domain-containing protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2 E NAEGRDRAFT_57196 DNA dependent protein kinase catalytic subunit K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1] D MRX complex E NAEGRDRAFT_58924 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11 D DNA Ligase 4 complex E NAEGRDRAFT_79495 ATP-dependent DNA ligase IV K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] D X-family DNA polymerases E NAEGRDRAFT_62711 hypothetical protein K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-] D Other NHEJ factors E NAEGRDRAFT_65290 hypothetical protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-] E NAEGRDRAFT_82802 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-] E NAEGRDRAFT_64819 hypothetical protein K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1 C FA (Fanconi anemia) pathway D FA core complex E NAEGRDRAFT_62090 hypothetical protein K10892 FANCE; fanconi anemia group E protein E NAEGRDRAFT_29885 hypothetical protein K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27] D FA core complex binding factors E NAEGRDRAFT_81299 hypothetical protein K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23] D Bloom's syndrome complex (BTR) E NAEGRDRAFT_32708 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4] E NAEGRDRAFT_81118 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] D FANCD2-I complex E NAEGRDRAFT_57172 hypothetical protein K10895 FANCI; fanconi anemia group I protein D Downstream FA components E NAEGRDRAFT_45350 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein D Other FA pathway factors E NAEGRDRAFT_58243 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1] E NAEGRDRAFT_75398 AM57; hypothetical protein K11137 TELO2; telomere length regulation protein E NAEGRDRAFT_49758 hypothetical protein K15361 WDR48; WD repeat-containing protein 48 C Other DSBR factors D Protein phosphatase 6 E NAEGRDRAFT_35944 hypothetical protein K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16] E NAEGRDRAFT_57747 SAPS domain-containing protein K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3 E NAEGRDRAFT_64981 hypothetical protein K15503 ANKRD44; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B D Ubiquitin ligases D Others E NAEGRDRAFT_75754 hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1 E NAEGRDRAFT_78056 WD40 repeat domain-containing protein K24752 WDR70; WD repeat-containing protein 70 B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D NAEGRDRAFT_68049 hypothetical protein K03510 POLI; DNA polymerase iota [EC:2.7.7.7] D NAEGRDRAFT_67675 hypothetical protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-] C B-family DNA polymerases D NAEGRDRAFT_81016 ATREV3; DNA binding protein-like protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7] C A-family DNA polymerase C Rad6 epistasis group D NAEGRDRAFT_60667 hypothetical protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D NAEGRDRAFT_36679 hypothetical protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D NAEGRDRAFT_65872 hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27] D NAEGRDRAFT_78033 ubiquitin-conjugating enzyme family protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant D NAEGRDRAFT_82996 hypothetical protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] C Other TLS factors D NAEGRDRAFT_66232 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen D NAEGRDRAFT_35238 PCNA proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D NAEGRDRAFT_51962 SprT domain-containing protein K26957 GCNA; germ cell nuclear acidic protein B Check point factors C Rad9-Hus1-Rad1 complex D NAEGRDRAFT_62743 hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2] D NAEGRDRAFT_29264 AM27; hypothetical protein K10903 HUS1; HUS1 checkpoint protein D NAEGRDRAFT_53469 AM38; hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C HRAD17(Rad24)-RFC complex D NAEGRDRAFT_47863 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein D NAEGRDRAFT_68675 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 D NAEGRDRAFT_44707 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 D NAEGRDRAFT_29498 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 D NAEGRDRAFT_29162 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 C Rad17-Mec3-Ddc1 complex D NAEGRDRAFT_53469 AM38; hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C FPC (fork protection complex) C Triple T complex D NAEGRDRAFT_75398 AM57; hypothetical protein K11137 TELO2; telomere length regulation protein D NAEGRDRAFT_57589 hypothetical protein K20403 TTI1; TELO2-interacting protein 1 C BAG6-UBL4A-GET4 complex D NAEGRDRAFT_73437 hypothetical protein K23387 GET4; golgi to ER traffic protein 4 C Other check point factors D NAEGRDRAFT_31751 hypothetical protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] D NAEGRDRAFT_78079 serine/threonine-protein kinase K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D NAEGRDRAFT_52543 hypothetical protein K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta D NAEGRDRAFT_80121 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon D NAEGRDRAFT_79667 14-3-3 protein-like protein K06630 YWHAE; 14-3-3 protein epsilon D NAEGRDRAFT_34237 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon D NAEGRDRAFT_58822 14-3-3 like protein K06630 YWHAE; 14-3-3 protein epsilon D NAEGRDRAFT_48087 hypothetical protein K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1] D NAEGRDRAFT_69957 hypothetical protein K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1] D NAEGRDRAFT_44667 hypothetical protein K12196 VPS4; vacuolar protein-sorting-associated protein 4 D NAEGRDRAFT_52801 hypothetical protein K12196 VPS4; vacuolar protein-sorting-associated protein 4 D NAEGRDRAFT_82205 hypothetical protein K12196 VPS4; vacuolar protein-sorting-associated protein 4 B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases D NAEGRDRAFT_30440 hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein D NAEGRDRAFT_59473 FM162; hypothetical protein K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-] D NAEGRDRAFT_31961 hypothetical protein K21813 ENDOV; endonuclease V [EC:3.1.26.-] D NAEGRDRAFT_60763 hypothetical protein K21813 ENDOV; endonuclease V [EC:3.1.26.-] C Helicases C PSO4 complex D NAEGRDRAFT_69090 PRP19/PSO4 pre-mRNA processing factor K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D NAEGRDRAFT_55455 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D NAEGRDRAFT_50726 hypothetical protein K12862 PLRG1; pleiotropic regulator 1 C Modulation of nucleotide pools D NAEGRDRAFT_69068 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NAEGRDRAFT_70971 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NAEGRDRAFT_71666 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NAEGRDRAFT_69330 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NAEGRDRAFT_32493 hypothetical protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] D NAEGRDRAFT_56348 hypothetical protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair C BER (base exicision repair) D DNA glycosylases E NAEGRDRAFT_33170 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E NAEGRDRAFT_52318 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E NAEGRDRAFT_70374 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E NAEGRDRAFT_68804 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RecJ D DNA ligase D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) E TRCF (transcription-repair coupling factor) C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme D DNA ligase D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins D RecFOR pathway proteins D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway E Facilitator E Supressor B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C Other SOS response factors B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases C Modulation of nucleotide pools D NAEGRDRAFT_69068 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NAEGRDRAFT_70971 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NAEGRDRAFT_71666 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NAEGRDRAFT_69330 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024