+E	Replication protein	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; DNA Replication Proteins - Nitrospira japonica</h2>
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A<b>Eukaryotic type</b>
B  DNA Replication Initiation Factors
C    pre-RC (pre-replication complex)
C    CDK (cyclin dependent kinase)
C    DDK (Dbf-4 dependent kinase)
C    GINS complex
C    Other initiation factors
B  DNA Replication Elongation Factors
C    DNA polymerase alpha / primase complex
C    DNA polymerase epsilon complex
C    DNA polymerase delta complex
C    DNA polymerase gamma complex (mitochondrial)
C    RPA (replication protein A)
C    RFC (replication factor C)
C    RNase H
D      NSJP_2415 rnhA; ribonuclease HI, degrades RNA of DNA-RNA hybrids	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
C    Other elongation factors
B  DNA Replication Termination Factors
C    DNA methylation enzymes
C    Prevention of re-replication factors
C    Telomere proteins
D      Shelterin complex
D      TERB1-TERB2-MAJIN complex
D      CST complex (animals)
D      CST complex (yeast)
D      RIF proteins
D      SIR proteins
C    Telomerase complex (animals)
D      Dyskerin complex
C    Telomerase complex (fungi)
D      Sm core complex
C    ELG1-RFC complex
C    MRN complex
C    Other termination factors
B  DNA Topoisomerases
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A<b>Prokaryotic type</b>
B  DNA Replication Initiation Factors
C    Initiation factors (bacterial)
D      NSJP_0592 hupB; Transcriptional dual regulator HU-beta	K03530 hupB; DNA-binding protein HU-beta 
D      NSJP_1457 hupB; HU, DNA-binding transcriptional regulator, beta subunit	K03530 hupB; DNA-binding protein HU-beta 
D      NSJP_0745 ihfA; Integration host factor subunit alpha	K04764 ihfA; integration host factor subunit alpha 
D      NSJP_1482 ihfB; integration host factor (IHF), DNA-binding protein, beta subunit	K05788 ihfB; integration host factor subunit beta 
D      NSJP_1003 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator	K02313 dnaA; chromosomal replication initiator protein 
D      NSJP_0262 dnaC; Replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] 
D      NSJP_0602 dnaB; Replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] 
D      NSJP_3462 dnaG; DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101] 
D      NSJP_1763 ssb; Single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein 
C    Initiation factors (archaeal)
B  DNA Replication Elongation Factors
C    Elongation factors (bacterial)
D      DNA polymerase III holoenzyme
E        NSJP_3479 dnaE; DNA polymerase III alpha subunit	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] 
E        NSJP_1004 dnaN; DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] 
E        NSJP_0867 holA; putative DNA polymerase III, delta subunit	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] 
E        NSJP_4094 holB; DNA polymerase III, delta' subunit	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] 
E        NSJP_1343 dnaX; DNA polymerase III, gamma and tau subunits	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] 
D      RNase H
E        NSJP_2415 rnhA; ribonuclease HI, degrades RNA of DNA-RNA hybrids	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
E        NSJP_0057 rnhB; Ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4] 
E        NSJP_2007 rnhC; Ribonuclease	K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] 
D      Other elongation factors
E        NSJP_0792 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7] 
E        NSJP_3198 ligA; DNA ligase	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
C    Elongation factors (archaeal)
D      B-family DNA polymerases
D      D-family DNA polymerases
D      RNase H
E        NSJP_2415 rnhA; ribonuclease HI, degrades RNA of DNA-RNA hybrids	K03469 rnhA; ribonuclease HI [EC:3.1.26.4] 
E        NSJP_0057 rnhB; Ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4] 
D      RFC (replication factor C)
D      Other elongation factors
B  DNA Replication Termination Factors
C    Terminus site-binding protein
C    DNA methylation enzymes
C    Prevention of re-replication factors
B  DNA Topoisomerases
C    NSJP_1006 gyrA; DNA gyrase (type II topoisomerase), subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] 
C    NSJP_1005 gyrB; DNA gyrase, subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] 
C    NSJP_3352 top6A; Type 2 DNA topoisomerase 6 subunit A	K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] 
C    NSJP_3351 top6B; Type 2 DNA topoisomerase 6 subunit B	K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] 
C    NSJP_2034 topA; DNA topoisomerase 1	K03168 topA; DNA topoisomerase I [EC:5.6.2.1] 
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#Last updated: November 2, 2022