+F Repair protein KO #

  DNA Repair and Recombination Proteins - Natrialba magadii

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D Nmag_2347 ogt2; putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Nmag_2819 ogt1; putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Nmag_0575 phr2; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E Nmag_0037 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E Nmag_0523 DNA N-glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] E Nmag_0317 nthB; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] E Nmag_3237 nthA; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex E Nmag_2041 pcn1; DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen E Nmag_4211 pcn2; DNA polymerase sliding clamp phiCh1-VP59 K04802 PCNA; proliferating cell nuclear antigen E Nmag_3231 fen1; flap endonuclease Fen1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E Nmag_0608 ligB; DNA ligase (ATP) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex E Nmag_3039 rad25b; DNA repair helicase Rad25 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E Nmag_1769 rad3b; DNA repair helicase Rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E Nmag_1918 rad3a; DNA repair helicase Rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D RPA (replication factor A) E Nmag_2204 rpa2; replication protein A K07466 RFA1; replication factor A1 D Other NER factors E Nmag_0608 ligB; DNA ligase (ATP) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) E Nmag_2204 rpa2; replication protein A K07466 RFA1; replication factor A1 D RFC (replication factor C) D Other MMR factors E Nmag_2041 pcn1; DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen E Nmag_4211 pcn2; DNA polymerase sliding clamp phiCh1-VP59 K04802 PCNA; proliferating cell nuclear antigen E Nmag_0608 ligB; DNA ligase (ATP) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) E Nmag_2204 rpa2; replication protein A K07466 RFA1; replication factor A1 D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors D Nmag_2041 pcn1; DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen D Nmag_4211 pcn2; DNA polymerase sliding clamp phiCh1-VP59 K04802 PCNA; proliferating cell nuclear antigen B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D Nmag_1423 NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Nmag_1593 NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Nmag_2524 NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Nmag_1337 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D Nmag_2347 ogt2; putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Nmag_2819 ogt1; putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Nmag_0575 phr2; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E Nmag_0633 uracil-DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E Nmag_1447 udg1; uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E Nmag_1747 udg2; uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E Nmag_3342 uracil-DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E Nmag_3118 DNA N-glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E Nmag_0037 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E Nmag_0317 nthB; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] E Nmag_3237 nthA; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E Nmag_0969 apn1; endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] E Nmag_1127 nfi; endonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7] E Nmag_1444 UPF0215 family protein K09120 dU; endonuclease dU D RecJ E Nmag_2008 recJ1; single-stranded-DNA-specific exonuclease RecJ1 K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNA ligase E Nmag_2085 ligA; DNA ligase (NAD) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors E Nmag_1263 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A E Nmag_2070 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B E Nmag_2078 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C E Nmag_1397 uvrD; repair helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E Nmag_2085 ligA; DNA ligase (NAD) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) E TRCF (transcription-repair coupling factor) C MMR (mismatch excision repair) D Mismatch and loop recognition factors E Nmag_0330 mutS1a; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS E Nmag_1284 mutS1b; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS E Nmag_1162 mutS5b; DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 E Nmag_2063 mutS5a; DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 D Molecular matchmaker E Nmag_1289 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme D DNA ligase E Nmag_2085 ligA; DNA ligase (NAD) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E Nmag_1397 uvrD; repair helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E Nmag_2437 rad50; DNA double-strand break repair ATPase Rad50 K03546 sbcC; DNA repair protein SbcC/Rad50 E Nmag_2438 mre11; DNA double-strand break repair protein Mre11 K03547 sbcD; DNA repair protein SbcD/Mre11 D RecFOR pathway proteins E Nmag_2008 recJ1; single-stranded-DNA-specific exonuclease RecJ1 K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AddAB pathway proteins E Nmag_2400 UvrD/REP family helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Other HR factor D Archaeal homologous recombinant proteins E Nmag_1831 radA; DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA E Nmag_0077 radB; DNA repair and recombination protein RadB K04484 radB; DNA repair protein RadB E Nmag_1845 hjc; Holliday junction resolvase Hjc K03552 hjr; holliday junction resolvase [EC:3.1.21.10] E Nmag_2437 rad50; DNA double-strand break repair ATPase Rad50 K03546 sbcC; DNA repair protein SbcC/Rad50 E Nmag_2438 mre11; DNA double-strand break repair protein Mre11 K03547 sbcD; DNA repair protein SbcD/Mre11 E Nmag_1964 hel308a; ATP-dependent DNA helicase Hel308 K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F Nmag_0305 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F Nmag_0306 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F Nmag_1686 homolog to DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] F Nmag_2461 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F Nmag_2008 recJ1; single-stranded-DNA-specific exonuclease RecJ1 K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F Nmag_2085 ligA; DNA ligase (NAD) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F Nmag_1263 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A F Nmag_2070 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D Nmag_0629 polY; DNA-directed DNA polymerase Y K04479 dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7] C Other SOS response factors B Other factors with a suspected DNA repair function C DNA polymerase D Nmag_1134 polX; DNA-directed DNA polymerase X K02347 polX; DNA polymerase (family X) C DNA helicases D Nmag_1016 lhr2; ATP-dependent DNA helicase (intein-containing) K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Nmag_3388 lhr1; ATP-dependent DNA helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] C Modulation of nucleotide pools D Nmag_1423 NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Nmag_1593 NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Nmag_2524 NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Nmag_1337 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Nmag_0059 nrdJ; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (intein-containing) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Nmag_2657 nrdA; ribonucleoside-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Nmag_0835 nrdB2; putative ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Nmag_2656 nrdB1; ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Nmag_3412 nrdB3; putative ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C Others D Nmag_1108 nreA; DNA repair protein NreA K22585 nreA; DNA repair protein NreA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 10, 2025