+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Nakamurella multipartita
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ACRISPR-Cas system
B Universal Cas proteins
C Namu_3049 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C Namu_1244 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
C Namu_3048 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D Namu_3055 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D Namu_1232 conserved hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
D Namu_1232 conserved hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-E factors
D Namu_3054 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D Namu_3053 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB
D Namu_3052 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D Namu_3051 CRISPR-associated protein Cas5 family K19125 casD; CRISPR system Cascade subunit CasD
D Namu_3050 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
D Namu_1227 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C Namu_4621 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C Namu_1105 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C Namu_4622 Restriction endonuclease S subunits-like protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C Namu_1103 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C Namu_4623 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C Namu_1102 Site-specific DNA-methyltransferase (adenine-specific) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D Namu_4634 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Namu_1962 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
D Namu_2452 phage shock protein C, PspC K03973 pspC; phage shock protein C
D Namu_4820 phage shock protein C, PspC K03973 pspC; phage shock protein C
C CcdB-CcdA
C ParE-ParD
D Namu_3723 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D Namu_3722 putative addiction module antidote protein, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
D Namu_1861 death-on-curing family protein K07341 doc; death on curing protein
C HigB-HigA
C MqsR-MqsA
C VapC-VapB
D Namu_0052 PilT protein domain protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-]
D Namu_0051 Rv0623 family protein transcription factor K19687 vapB; antitoxin VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D Namu_3798 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Namu_0570 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Namu_1475 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C Namu_1443 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023