+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Nakamurella multipartita

% ! ACRISPR-Cas system B Universal Cas proteins C Namu_3049 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C Namu_1244 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 C Namu_3048 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D Namu_3055 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D Namu_1232 conserved hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors D Namu_1232 conserved hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-E factors D Namu_3054 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA D Namu_3053 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB D Namu_3052 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC D Namu_3051 CRISPR-associated protein Cas5 family K19125 casD; CRISPR system Cascade subunit CasD D Namu_3050 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE C Subtype I-F factors C Subtype I-U factors D Namu_1227 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10 B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C Namu_4621 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C Namu_1105 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C Namu_4622 Restriction endonuclease S subunits-like protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C Namu_1103 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C Namu_4623 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C Namu_1102 Site-specific DNA-methyltransferase (adenine-specific) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D Namu_4634 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D Namu_1962 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ C YoeB-YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB D Namu_2452 phage shock protein C, PspC K03973 pspC; phage shock protein C D Namu_4820 phage shock protein C, PspC K03973 pspC; phage shock protein C C CcdB-CcdA C ParE-ParD D Namu_3723 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4 D Namu_3722 putative addiction module antidote protein, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd D Namu_1861 death-on-curing family protein K07341 doc; death on curing protein C HigB-HigA C MqsR-MqsA C VapC-VapB D Namu_0052 PilT protein domain protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-] D Namu_0051 Rv0623 family protein transcription factor K19687 vapB; antitoxin VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D Namu_3798 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Namu_0570 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Namu_1475 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C Namu_1443 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023