+E Transcription factors KO #

  Transcription Factors - Neisseria meningitidis M01-240355 (serogroup B)

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D NMBM01240355_0818 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NMBM01240355_0078 modification methylase HphIA K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NMBM01240355_0295 Modification methylase HgaIA K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NMBM01240355_1529 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NMBM01240355_1942 cytosine-specific methyltransferase HgiDII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D NMBM01240355_1523 transcriptional regulator MtrA K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE C LysR family D NMBM01240355_1990 putative transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D NMBM01240355_0175 hydrogen peroxide-inducible genes regulatory protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D NMBM01240355_0389 putative transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator C DeoR family D NMBM01240355_1473 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family C GntR family D NMBM01240355_1635 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex C TetR/AcrR family D NMBM01240355_1640 transcriptional regulator MtrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor C Lrp/AsnC family D NMBM01240355_0572 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NMBM01240355_1569 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D NMBM01240355_1511 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family C Fur family D NMBM01240355_0207 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NMBM01240355_1208 zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family C CRP/FNR family D NMBM01240355_0388 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D NMBM01240355_1313 iscR; iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D NMBM01240355_0446 transcriptional repressor nsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family C XRE family C PadR family C Other families D NMBM01240355_1323 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D NMBM01240355_1348 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D NMBM01240355_1820 DNA-binding protein K07726 K07726; putative transcriptional regulator D NMBM01240355_1494 Helix-turn-helix family protein K07726 K07726; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D NMBM01240355_0409 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D NMBM01240355_0576 conserved domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D NMBM01240355_0354 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D NMBM01240355_1872 putative chromosome partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NMBM01240355_1496 phage CP4-57 regulatory protein AlpA K07733 alpA; prophage regulatory protein D NMBM01240355_1272 conserved hypothetical protein K07735 algH; putative transcriptional regulator D NMBM01240355_0055 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NMBM01240355_1741 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D NMBM01240355_0419 mraZ protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0