+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Neisseria musculi

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D H7A79_1439 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D H7A79_2511 exonuclease family protein K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C H7A79_1445 era; GTP-binding protein Era K03595 era; GTPase C H7A79_2617 cgtA; obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C H7A79_2239 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor C H7A79_1290 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA C H7A79_0855 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB C H7A79_1889 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D H7A79_0142 pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D H7A79_0351 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D H7A79_1320 NOL1/NOP2/sun family protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D H7A79_1901 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D H7A79_1910 RNA methyltransferase RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D H7A79_0590 RNA methyltransferase RsmE family protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D H7A79_1951 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D H7A79_2277 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D H7A79_2502 tetrapyrrole (Corrin/Porphyrin) Methylases family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D H7A79_2773 tetrapyrrole (Corrin/Porphyrin) Methylases family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D H7A79_2786 rsmJ; ribosomal RNA small subunit methyltransferase J K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] C 23S rRNA modification factors D H7A79_1179 RNA 2'-O ribose methyltransferase substrate binding family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D H7A79_1296 ftsJ-like methyltransferase family protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D H7A79_2738 putative SPOUT methyltransferase family protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D H7A79_0310 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D H7A79_0687 rlmK; ribosomal RNA large subunit methyltransferase K K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264] D H7A79_1700 hypothetical protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D H7A79_0883 rlmN; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D H7A79_2723 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D H7A79_0816 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D H7A79_0586 pseudouridine synthase RluA family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D H7A79_1171 pseudouridine synthase RluA family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D H7A79_1059 pseudouridine synthase family protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D H7A79_0926 pseudouridine synthase family protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] B ribosomal protein modification factors C H7A79_0918 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C H7A79_2692 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C H7A79_2043 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] C H7A79_1452 prmB; glutamine-N5 methyltransferase ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] B rRNA processing factors C H7A79_1439 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C H7A79_0587 ribonuclease Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12] C H7A79_0058 ribonuclease Rne/Rng family domain protein K08301 rng; ribonuclease G [EC:3.1.26.-] C H7A79_0105 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases B GTPases C H7A79_1445 era; GTP-binding protein Era K03595 era; GTPase C H7A79_2206 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C H7A79_0876 engA; ribosome-associated GTPase EngA K03977 engA; GTPase C H7A79_2617 cgtA; obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C H7A79_0820 ylqF; ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A C H7A79_1499 hflX; GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C H7A79_2142 telomere recombination family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C H7A79_0636 relA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C H7A79_1084 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C H7A79_1291 hypothetical protein K09748 rimP; ribosome maturation factor RimP C H7A79_0056 S4 domain protein K14761 rlbA; ribosome-associated protein C H7A79_1759 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein C H7A79_2352 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor C H7A79_1297 CRS1 / YhbY domain protein K07574 yhbY; RNA-binding protein C H7A79_2716 hypothetical protein K09889 yjgA; ribosome-associated protein C H7A79_2765 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor C H7A79_2435 ferrous iron transport B family protein K06942 ychF; ribosome-binding ATPase C H7A79_2504 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2024