+E Ribosome biogenesis KO
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Ribosome Biogenesis - Neisseria musculi
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D H7A79_1439 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D H7A79_2511 exonuclease family protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C H7A79_1445 era; GTP-binding protein Era K03595 era; GTPase
C H7A79_2617 cgtA; obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C H7A79_2239 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
C H7A79_1290 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C H7A79_0855 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
C H7A79_1889 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D H7A79_0142 pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D H7A79_0351 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D H7A79_1320 NOL1/NOP2/sun family protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D H7A79_1901 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D H7A79_1910 RNA methyltransferase RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D H7A79_0590 RNA methyltransferase RsmE family protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D H7A79_1951 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D H7A79_2277 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D H7A79_2502 tetrapyrrole (Corrin/Porphyrin) Methylases family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D H7A79_2773 tetrapyrrole (Corrin/Porphyrin) Methylases family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D H7A79_2786 rsmJ; ribosomal RNA small subunit methyltransferase J K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
C 23S rRNA modification factors
D H7A79_1179 RNA 2'-O ribose methyltransferase substrate binding family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D H7A79_1296 ftsJ-like methyltransferase family protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D H7A79_2738 putative SPOUT methyltransferase family protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D H7A79_0310 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D H7A79_0687 rlmK; ribosomal RNA large subunit methyltransferase K K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264]
D H7A79_1700 hypothetical protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D H7A79_0883 rlmN; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D H7A79_2723 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D H7A79_0816 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D H7A79_0586 pseudouridine synthase RluA family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D H7A79_1171 pseudouridine synthase RluA family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D H7A79_1059 pseudouridine synthase family protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D H7A79_0926 pseudouridine synthase family protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
B ribosomal protein modification factors
C H7A79_0918 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C H7A79_2692 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
C H7A79_2043 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
C H7A79_1452 prmB; glutamine-N5 methyltransferase ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
B rRNA processing factors
C H7A79_1439 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C H7A79_0587 ribonuclease Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
C H7A79_0058 ribonuclease Rne/Rng family domain protein K08301 rng; ribonuclease G [EC:3.1.26.-]
C H7A79_0105 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
B GTPases
C H7A79_1445 era; GTP-binding protein Era K03595 era; GTPase
C H7A79_2206 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C H7A79_0876 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
C H7A79_2617 cgtA; obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
C H7A79_0820 ylqF; ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
C H7A79_1499 hflX; GTP-binding protein HflX K03665 hflX; GTPase
B Other maturation factors
C H7A79_2142 telomere recombination family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C H7A79_0636 relA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C H7A79_1084 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C H7A79_1291 hypothetical protein K09748 rimP; ribosome maturation factor RimP
C H7A79_0056 S4 domain protein K14761 rlbA; ribosome-associated protein
C H7A79_1759 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
C H7A79_2352 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor
C H7A79_1297 CRS1 / YhbY domain protein K07574 yhbY; RNA-binding protein
C H7A79_2716 hypothetical protein K09889 yjgA; ribosome-associated protein
C H7A79_2765 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
C H7A79_2435 ferrous iron transport B family protein K06942 ychF; ribosome-binding ATPase
C H7A79_2504 hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2024