+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Nelumbo nucifera (sacred lotus)</h2>
%<!-- w=600, -->
!
A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        104604309 RPB1; DNA-directed RNA polymerase II subunit 1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        104587142 RPB2; DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        104610226 DNA-directed RNA polymerases II, IV and V subunit 3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        104585944 DNA-directed RNA polymerases II, IV and V subunit 3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        104597389 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        104600000 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        104607763 DNA-directed RNA polymerase II subunit 4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        104589806 DNA-directed RNA polymerases IV and V subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        104586825 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        104605091 DNA-directed RNA polymerases II, IV and V subunit 9A	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        104609471 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104590192 DNA-directed RNA polymerases IV and V subunit 5B-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104589742 DNA-directed RNA polymerases II and V subunit 6B-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        104605253 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104603134 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        104613372 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        104591410 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        104586911 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        104612685 DNA-directed RNA polymerase IV subunit 1	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        104589430 DNA-directed RNA polymerase V subunit 1	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        104610372 DNA-directed RNA polymerases IV and V subunit 2-like	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        104609542 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        104612429 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        104597122 transcription initiation factor IIA subunit 1-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        104600834 transcription initiation factor IIA large subunit-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        104601097 transcription initiation factor IIA large subunit-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        104595543 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        104611961 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        104606299 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        104612040 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        104597694 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        104611161 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        104595190 transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        104586096 transcription initiation factor TFIID subunit 1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        104603053 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        104607991 transcription initiation factor TFIID subunit 4b	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        104611646 transcription initiation factor TFIID subunit 4b	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        104610720 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        104595222 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        104597644 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        104599378 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        104597926 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        104586513 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        104594523 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        104600672 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        104599814 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        104597095 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        104607714 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        104598825 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        104605115 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        104601178 transcription initiation factor IIE subunit alpha	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        104600600 general transcription factor IIE subunit 2-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        104609404 transcription initiation factor IIE subunit beta-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        104594145 transcription initiation factor IIF subunit alpha-like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        104606534 transcription initiation factor IIF subunit alpha-like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        104594798 general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        104605517 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        104607557 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        104589524 probable RNA polymerase II transcription factor B subunit 1-1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        104597477 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        104609135 RNA polymerase II transcription factor B subunit 4	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        104587159 RNA polymerase II transcription factor B subunit 2	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        104610652 DNA repair helicase XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        104612362 DNA repair helicase XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        104611842 RNA polymerase II transcription factor B subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        104593645 cyclin-dependent kinase D-1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        104596464 cyclin-dependent kinase D-1-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        104613339 cyclin-dependent kinase D-1-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        104609178 uncharacterized LOC104609178	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        104607248 cyclin-H1-1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        104592276 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        104600523 mediator of RNA polymerase II transcription subunit 11-like	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        104595365 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        104609067 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        104600584 mediator of RNA polymerase II transcription subunit 20a-like	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        104586783 mediator of RNA polymerase II transcription subunit 22a-like	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        104598921 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        104611116 mediator of RNA polymerase II transcription subunit 7a-like	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        104593484 mediator of RNA polymerase II transcription subunit 10b-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        104598265 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        104606371 mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        104609554 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        104587538 cyclin-dependent kinase E-1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        104609440 cyclin-C1-1-like	K15161 CCNC; cyclin-C 
E        104597669 mediator of RNA polymerase II transcription subunit 13	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        104607371 mediator of RNA polymerase II transcription subunit 23	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        104603021 mediator of RNA polymerase II transcription subunit 25	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        104590078 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        104596396 mediator of RNA polymerase II transcription subunit 32	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        104596412 mediator of RNA polymerase II transcription subunit 33A	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        104612949 mediator of RNA polymerase II transcription subunit 33A-like	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        104589649 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        104605324 transformation/transcription domain-associated protein-like	K08874 TRRAP; transformation/transcription domain-associated protein 
E        104594227 transcriptional adapter ADA2	K11314 TADA2A; transcriptional adapter 2-alpha 
E        104606608 transcriptional adapter ADA2-like	K11314 TADA2A; transcriptional adapter 2-alpha 
E        104603053 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        104607991 transcription initiation factor TFIID subunit 4b	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        104611646 transcription initiation factor TFIID subunit 4b	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        104610720 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        104595222 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        104597644 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        104594523 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        104600672 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        104597095 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        104607714 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        104604138 SAGA-associated factor 11 homolog	K11363 SGF11; SAGA-associated factor 11 
E        104606037 SAGA-associated factor 11 homolog	K11363 SGF11; SAGA-associated factor 11 
E        104591516 uncharacterized LOC104591516	K11364 SGF29; SAGA-associated factor 29 
E        104608857 protein CHROMATIN REMODELING 5	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        104592892 transcription and mRNA export factor SUS1-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        104591709 transcription and mRNA export factor SUS1	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        104592528 ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        104605437 ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        104586157 ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        104594657 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
E        104597643 splicing factor 3B subunit 3	K12830 SF3B3; splicing factor 3B subunit 3 
E        104599257 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        104610636 ATP-dependent helicase BRM-like	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        104585574 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        104592824 SWI/SNF complex subunit SWI3A	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        104595723 SWI/SNF complex subunit SWI3D	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        104605796 SWI/SNF complex subunit SWI3C	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        104606859 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        104592908 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        104588404 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        104599561 actin-related protein 4	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        104585574 chromatin structure-remodeling complex protein BSH	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        104605832 RNA polymerase II transcriptional coactivator KIWI-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        104606666 RNA polymerase II transcriptional coactivator KIWI-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        104604034 RNA polymerase II transcriptional coactivator KELP	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        104609729 cell division cycle and apoptosis regulator protein 1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        104593753 transcription elongation factor TFIIS-like	K03145 TFIIS; transcription elongation factor S-II 
E        104594463 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        104609990 transcription elongation factor TFIIS-like	K03145 TFIIS; transcription elongation factor S-II 
E        104610696 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        104589274 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        104593641 transcription elongation factor SPT6 homolog	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        104587695 polyadenylation and cleavage factor homolog 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        104604863 polyadenylation and cleavage factor homolog 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        104610875 polyadenylation and cleavage factor homolog 4	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        104612494 polyadenylation and cleavage factor homolog 4-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        104611855 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        104610329 cleavage and polyadenylation specificity factor subunit 3-I	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        104612482 uncharacterized LOC104612482	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        104585866 30-kDa cleavage and polyadenylation specificity factor 30	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        104598919 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104597075 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104600861 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104600239 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104606187 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104610024 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104608219 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104594895 uncharacterized LOC104594895	K06100 SYMPK; symplekin 
E        104595581 uncharacterized LOC104595581	K06100 SYMPK; symplekin 
E        104599551 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        104587998 5'-3' exoribonuclease 3-like	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        104606387 decapping nuclease DXO homolog, chloroplastic-like	K14845 RAI1; RAT1-interacting protein 
E        104609833 decapping nuclease DXO homolog, chloroplastic	K14845 RAI1; RAT1-interacting protein 
E        104591794 regulation of nuclear pre-mRNA domain-containing protein 2-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        104593264 branchpoint-bridging protein	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        104600072 histone acetyltransferase KAT6A	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        104606015 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        104607642 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        104607479 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
E        104590113 peptidyl-prolyl cis-trans isomerase Pin1-like	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        104597147 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        104596571 protein CDC73 homolog	K15175 CDC73; parafibromin 
E        104600580 protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        104597963 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        104595515 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        104585821 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        104596707 ELL-associated factor 2-like	K15186 EAF; ELL-associated factor 
E        104587771 ELL-associated factor 2	K15186 EAF; ELL-associated factor 
E        104595627 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        104596492 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        104600388 cyclin-T1-5-like	K15188 CCNT; cyclin T 
E        104610581 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        104611434 cyclin-T1-3-like	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        104595627 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        104596492 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        104600388 cyclin-T1-5-like	K15188 CCNT; cyclin T 
E        104610581 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        104611434 cyclin-T1-3-like	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        104592117 probable RNA methyltransferase At5g51130	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        104591134 la-related protein 6C-like	K15191 LARP7; La-related protein 7 
E        104593355 la-related protein 6B	K15191 LARP7; La-related protein 7 
E        104597735 la-related protein 6A	K15191 LARP7; La-related protein 7 
E        104595971 la-related protein 6C-like	K15191 LARP7; La-related protein 7 
E        104595627 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        104596492 cyclin-T1-4-like	K15188 CCNT; cyclin T 
E        104600388 cyclin-T1-5-like	K15188 CCNT; cyclin T 
E        104610581 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        104611434 cyclin-T1-3-like	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        104595830 TATA-binding protein-associated factor BTAF1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        104603084 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        104600944 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        104588779 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        104588273 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        104595583 protein spt2-like	K15193 SPTY2D1; protein SPT2 
E        104610549 protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        104596950 RNA polymerase II C-terminal domain phosphatase-like 2	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        104586445 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        104591832 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        104603314 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        104591293 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        104602596 CTD nuclear envelope phosphatase 1 homolog	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        104597171 protein IWS1 homolog 2-like	K17498 SPN1; transcription factor SPN1 
E        104601039 protein IWS1 homolog 2-like	K17498 SPN1; transcription factor SPN1 
E        104608119 transcriptional elongation regulator MINIYO	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        104607625 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        104605066 RNA polymerase II-associated protein 3	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        104600577 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        104598735 GPN-loop GTPase 1-like	K24104 GPN; GPN-loop GTPase 
E        104608524 GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        104605028 GPN-loop GTPase 1-like	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        104603290 DNA-directed RNA polymerase III subunit 1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        104586924 DNA-directed RNA polymerase III subunit 2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        104591261 DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        104601162 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        104593209 DNA-directed RNA polymerase III subunit RPC3	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        104598466 DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        104607618 uncharacterized LOC104607618	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        104606837 uncharacterized LOC104606837	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        104595743 DNA-directed RNA polymerase III subunit RPC5-like	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        104595744 DNA-directed RNA polymerase III subunit RPC5-like	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        104603087 DNA-directed RNA polymerase III subunit RPC8-like	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        104612437 DNA-directed RNA polymerase III subunit RPC8-like	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        104600359 DNA-directed RNA polymerase III subunit rpc9-like	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        104604716 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        104609471 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104590192 DNA-directed RNA polymerases IV and V subunit 5B-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104589742 DNA-directed RNA polymerases II and V subunit 6B-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        104605253 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104603134 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        104613372 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        104591410 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        104586911 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        104593605 transcription factor IIIA	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        104597694 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        104611161 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        104593430 transcription factor IIIB 90 kDa subunit	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        104613109 plant-specific TFIIB-related protein PTF2-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        104587604 plant-specific TFIIB-related protein PTF2-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        104609943 uncharacterized LOC104609943	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        104608836 uncharacterized LOC104608836	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        104586906 uncharacterized LOC104586906	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        104593928 general transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        104590570 general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        104586434 general transcription factor 3C polypeptide 6-like	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        104590570 general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        104593928 general transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        104592497 uncharacterized LOC104592497	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        104588548 snRNA-activating protein complex subunit	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        104601413 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
E        104590382 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        104593642 DNA-directed RNA polymerase I subunit 1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        104612457 DNA-directed RNA polymerase I subunit 2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        104591261 DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        104601162 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        104609240 DNA-directed RNA polymerase I subunit rpa49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        104602122 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        104609471 DNA-directed RNA polymerases II and IV subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104590192 DNA-directed RNA polymerases IV and V subunit 5B-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        104589742 DNA-directed RNA polymerases II and V subunit 6B-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        104605253 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        104603134 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        104613372 DNA-directed RNA polymerases II, IV and V subunit 12	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        104591410 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        104586911 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        104597694 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        104611161 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        104603963 high mobility group B protein 6-like	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        104608522 RNA polymerase I-specific transcription initiation factor RRN3-like	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        104608523 RNA polymerase I-specific transcription initiation factor RRN3-like	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        104595881 upstream activation factor subunit spp27-like	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        104610696 transcription elongation factor SPT4 homolog 2-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        104589274 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        104586145 ISWI chromatin-remodeling complex ATPase CHR11-like	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        104587602 ISWI chromatin-remodeling complex ATPase CHR11	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        10743915 rpoA; RNA polymerase alpha subunit	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        10743874 rpoB; RNA polymerase beta subunit	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        10743872 rpoC2; RNA polymerase beta' subunit	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
E        10743873 rpoC1; RNA polymerase beta	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
D      Sigma factors
E        104603917 RNA polymerase sigma factor sigA-like	K03086 rpoD; RNA polymerase primary sigma factor 
E        104610327 RNA polymerase sigma factor sigA-like	K03086 rpoD; RNA polymerase primary sigma factor 
E        104603972 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial	K03093 sigI; RNA polymerase sigma-I factor 
E        104588230 RNA polymerase sigma factor sigC	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        104606299 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        104612040 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        104601178 transcription initiation factor IIE subunit alpha	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: April 9, 2024