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Transcription Machinery - Neodiprion pinetum (white pine sawfly)
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E 124223498 DNA-directed RNA polymerase II subunit RPB1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E 124217108 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E 124219578 DNA-directed RNA polymerase II subunit RPB3 isoform X1 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E 124215007 DNA-directed RNA polymerase II subunit RPB11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
D Pol II specific subunits
E 124216499 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 124215928 DNA-directed RNA polymerase II subunit RPB9 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
E 124222653 uncharacterized protein LOC124222653 K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A
D Pol I, II, III common subunits
E 124223134 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 124223133 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 124222838 DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 124220628 DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 124212818 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
E 124216154 transcription initiation factor IIA subunit 1 isoform X1 K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E 124217510 transcription initiation factor IIA subunit 2 K03123 TFIIA2; transcription initiation factor TFIIA small subunit
D TFIIB
E 124211438 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E 124219656 TATA box-binding protein-like 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 124211961 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 124215419 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 124211927 transcription initiation factor TFIID subunit 1 K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
E 124219917 transcription initiation factor TFIID subunit 2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 124217921 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L K03130 TAF5; transcription initiation factor TFIID subunit 5
E 124212696 transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 124220626 transcription initiation factor TFIID subunit 6 isoform X1 K03131 TAF6; transcription initiation factor TFIID subunit 6
E 124217867 transcription initiation factor TFIID subunit 7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E 124213569 transcription initiation factor TFIID subunit 8 K14649 TAF8; transcription initiation factor TFIID subunit 8
E 124214261 transcription initiation factor TFIID subunit 9 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 124217820 transcription initiation factor TFIID subunit 10-like isoform X1 K03134 TAF10; transcription initiation factor TFIID subunit 10
E 124212061 transcription initiation factor TFIID subunit 11 isoform X1 K03135 TAF11; transcription initiation factor TFIID subunit 11
E 124218081 transcription initiation factor TFIID subunit 12 isoform X1 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 124215910 transcription initiation factor TFIID subunit 13 isoform X1 K03127 TAF13; transcription initiation factor TFIID subunit 13
D TFIIE
E 124217861 general transcription factor IIE subunit 1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E 124213464 transcription initiation factor IIE subunit beta K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
D TFIIF
E 124211157 general transcription factor IIF subunit 1 isoform X1 K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha
E 124214260 general transcription factor IIF subunit 2 K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
D TFIIH
E 124220854 general transcription factor IIH subunit 1 isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 124219352 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 124220829 general transcription factor IIH subunit 3 isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 124220292 general transcription factor IIH subunit 4 isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 124211998 general transcription and DNA repair factor IIH helicase subunit XPB K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 124223571 general transcription and DNA repair factor IIH helicase subunit XPD isoform X1 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 124210625 general transcription factor IIH subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 124222057 cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 124219893 CDK-activating kinase assembly factor MAT1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 124216697 cyclin-H isoform X1 K06634 CCNH; cyclin H
C Mediator complex
D Head
E 124220143 mediator of RNA polymerase II transcription subunit 6 isoform X1 K15128 MED6; mediator of RNA polymerase II transcription subunit 6
E 124220541 mediator of RNA polymerase II transcription subunit 8 isoform X1 K15129 MED8; mediator of RNA polymerase II transcription subunit 8
E 124219458 mediator of RNA polymerase II transcription subunit 11 K15131 MED11; mediator of RNA polymerase II transcription subunit 11
E 124215094 mediator of RNA polymerase II transcription subunit 17 isoform X1 K15133 MED17; mediator of RNA polymerase II transcription subunit 17
E 124213972 mediator of RNA polymerase II transcription subunit 18 K15135 MED18; mediator of RNA polymerase II transcription subunit 18
E 124217204 mediator of RNA polymerase II transcription subunit 19 K15137 MED19; mediator of RNA polymerase II transcription subunit 19
E 124219149 mediator of RNA polymerase II transcription subunit 20 K13528 MED20; mediator of RNA polymerase II transcription subunit 20
E 124215347 mediator of RNA polymerase II transcription subunit 22 K15139 MED22; mediator of RNA polymerase II transcription subunit 22
E 124217149 mediator of RNA polymerase II transcription subunit 29-like K15142 MED29; mediator of RNA polymerase II transcription subunit 29
E 124218047 mediator of RNA polymerase II transcription subunit 30 K15143 MED30; mediator of RNA polymerase II transcription subunit 30
D Middle
E 124212375 mediator of RNA polymerase II transcription subunit 4 isoform X1 K15146 MED4; mediator of RNA polymerase II transcription subunit 4
E 124222276 mediator of RNA polymerase II transcription subunit 7 K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E 124218875 mediator of RNA polymerase II transcription subunit 9 K15149 MED9; mediator of RNA polymerase II transcription subunit 9
E 124218281 mediator of RNA polymerase II transcription subunit 10 K15151 MED10; mediator of RNA polymerase II transcription subunit 10
E 124213638 mediator of RNA polymerase II transcription subunit 21 K15152 MED21; mediator of RNA polymerase II transcription subunit 21
E 124214648 mediator of RNA polymerase II transcription subunit 31 K15153 MED31; mediator of RNA polymerase II transcription subunit 31
D Tail
E 124216689 mediator of RNA polymerase II transcription subunit 14 isoform X1 K15156 MED14; mediator of RNA polymerase II transcription subunit 14
E 124218053 mediator of RNA polymerase II transcription subunit 16 isoform X1 K15159 MED16; mediator of RNA polymerase II transcription subunit 16
D CDK-module
E 124218012 cyclin-dependent kinase 8 isoform X1 K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E 124220301 cyclin-C K15161 CCNC; cyclin-C
E 124217136 mediator of RNA polymerase II transcription subunit 12 K15162 MED12; mediator of RNA polymerase II transcription subunit 12
E 124220419 mediator of RNA polymerase II transcription subunit 13 isoform X1 K15164 MED13; mediator of RNA polymerase II transcription subunit 13
D Other mediators
E 124212367 mediator of RNA polymerase II transcription subunit 23 isoform X1 K15166 MED23; mediator of RNA polymerase II transcription subunit 23
E 124217405 mediator of RNA polymerase II transcription subunit 24 K15167 MED24; mediator of RNA polymerase II transcription subunit 24
E 124222684 mediator of RNA polymerase II transcription subunit 27-like K15170 MED27; mediator of RNA polymerase II transcription subunit 27
E 124223552 mediator of RNA polymerase II transcription subunit 27 K15170 MED27; mediator of RNA polymerase II transcription subunit 27
C Coactivators
D SAGA/TFTC/STAGA complex
E 124217769 histone acetyltransferase KAT2A K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E 124217964 transformation/transcription domain-associated protein K08874 TRRAP; transformation/transcription domain-associated protein
E 124214258 transcription initiation protein SPT3 homolog K11313 SUPT3H; transcription initiation protein SPT3
E 124216718 transcriptional adapter 2-alpha-like isoform X1 K11314 TADA2A; transcriptional adapter 2-alpha
E 124217494 transcriptional adapter 2B isoform X1 K15127 TADA2B; transcriptional adapter 2-beta
E 124223290 transcriptional adapter 3-B K11315 TADA3; transcriptional adapter 3
E 124213971 transcriptional adapter 1-like K11317 TADA1; transcriptional adapter 1
E 124219917 transcription initiation factor TFIID subunit 2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 124217921 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L K03130 TAF5; transcription initiation factor TFIID subunit 5
E 124212696 transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 124220626 transcription initiation factor TFIID subunit 6 isoform X1 K03131 TAF6; transcription initiation factor TFIID subunit 6
E 124217867 transcription initiation factor TFIID subunit 7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E 124214261 transcription initiation factor TFIID subunit 9 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 124217820 transcription initiation factor TFIID subunit 10-like isoform X1 K03134 TAF10; transcription initiation factor TFIID subunit 10
E 124218081 transcription initiation factor TFIID subunit 12 isoform X1 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 124223003 ataxin-7-like protein 3 K11363 SGF11; SAGA-associated factor 11
E 124210848 SAGA-associated factor 29 isoform X1 K11364 SGF29; SAGA-associated factor 29
E 124218483 ataxin-7-like protein 1 isoform X1 K11318 ATXN7; ataxin-7
E 124223478 chromodomain-helicase-DNA-binding protein 1 isoform X1 K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E 124215510 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 124211677 ubiquitin carboxyl-terminal hydrolase 22 K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E 124215441 splicing factor 3B subunit 3 K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
E 124214579 ATP-dependent helicase brm isoform X1 K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
E 124215071 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E 124222215 SWI/SNF complex subunit SMARCC2 isoform X1 K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 124212537 brahma-associated protein of 60 kDa isoform X1 K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 124222019 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1 K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
E 124211883 actin-5C K05692 ACTB_G1; actin beta/gamma 1
E 124219703 actin-like protein 6B isoform X1 K11652 ACTL6B; actin-like protein 6B
E 124220194 actin-like protein 6B isoform X1 K11652 ACTL6B; actin-like protein 6B
E 124221511 protein polybromo-1 K11757 PBRM1; protein polybromo-1
D SWI/SNF complex
E 124215071 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D RSC complex
D Others
E 124218028 cell division cycle and apoptosis regulator protein 1-like K25827 CCAR1; cell division cycle and apoptosis regulator protein 1
C Other transcription-related factors
D Transcription elongation factors
E 124219225 transcription elongation factor S-II isoform X1 K03145 TFIIS; transcription elongation factor S-II
E 124211431 transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 124218247 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
E 124216998 transcription elongation factor SPT6 K11292 SUPT6H; transcription elongation factor SPT6
D Transcription termination factor
E 124212513 transcription termination factor 2 K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-]
E 124220528 cleavage and polyadenylation specificity factor subunit 1 isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 124216175 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 124214021 cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 124222074 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 124215145 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 124213176 symplekin K06100 SYMPK; symplekin
E 124216428 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 124219079 5'-3' exoribonuclease 2 homolog isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 124219356 decapping and exoribonuclease protein-like K14845 RAI1; RAT1-interacting protein
E 124220638 regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1 K15559 RTT103; regulator of Ty1 transposition protein 103
E 124218461 uncharacterized protein LOC124218461 K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3]
E 124223976 putative peptidyl-prolyl cis-trans isomerase dodo K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
D PAF1 complex
E 124216943 RNA polymerase II-associated factor 1 homolog K15174 PAF1; RNA polymerase II-associated factor 1
E 124214038 parafibromin K15175 CDC73; parafibromin
E 124223042 RNA polymerase-associated protein CTR9 homolog K15176 CTR9; RNA polymerase-associated protein CTR9
E 124223572 RNA polymerase-associated protein Rtf1 K15178 RTF1; RNA polymerase-associated protein RTF1
D NELF complex
E 124222915 negative elongation factor A K15179 WHSC2; negative elongation factor A
E 124212437 negative elongation factor B isoform X1 K15180 COBRA1; negative elongation factor B
E 124222918 negative elongation factor D K15181 TH1L; negative elongation factor C/D
E 124213467 negative elongation factor E K15182 RDBP; negative elongation factor E
D Super elongation complex (SEC)
E 124212674 cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D Little elongation complex (LEC)
E 124214857 uncharacterized protein LOC124214857 isoform X1 K26144 ICE2; little elongation complex subunit 2
D Brd4/P-TEFb complex
E 124212674 cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
E 124216335 7SK snRNA methylphosphate capping enzyme bin3-like K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
E 124212674 cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D DBIRD complex
D Others
E 124223422 TATA-binding protein-associated factor 172 K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
E 124213209 protein Dr1 K21751 DR1; down-regulator of transcription 1
E 124223464 RNA polymerase II subunit A C-terminal domain phosphatase K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
E 124212659 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 124218087 RNA polymerase II-associated protein 1 isoform X1 K20826 RPAP1; RNA polymerase II-associated protein 1
E 124212442 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1 K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
E 124210830 RNA polymerase II-associated protein 3 K23002 RPAP3; RNA polymerase II-associated protein 3
E 124219661 cyclin-K K23326 CCNK; cyclin K
E 124222137 GPN-loop GTPase 2 K24104 GPN; GPN-loop GTPase
E 124215293 GPN-loop GTPase 1 isoform X1 K24104 GPN; GPN-loop GTPase
E 124215296 GPN-loop GTPase 3 K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E 124221233 DNA-directed RNA polymerase III subunit RPC1 isoform X1 K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E 124224989 DNA-directed RNA polymerase III subunit RPC2 isoform X1 K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
E 124217503 DNA-directed RNA polymerases I and III subunit RPAC1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 124221349 probable DNA-directed RNA polymerases I and III subunit RPAC2 isoform X1 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E 124221257 DNA-directed RNA polymerase III subunit RPC3 K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3
E 124211094 DNA-directed RNA polymerase III subunit RPC4 K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E 124223318 DNA-directed RNA polymerase III subunit RPC5 K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5
E 124223398 probable DNA-directed RNA polymerase III subunit RPC6 K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E 124215098 DNA-directed RNA polymerase III subunit RPC7-like K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7
E 124214732 DNA-directed RNA polymerase III subunit RPC8 K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
E 124218596 DNA-directed RNA polymerase III subunit RPC9 K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9
E 124218615 DNA-directed RNA polymerase III subunit RPC10 K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
D Pol I, II, III common subunits
E 124223134 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 124223133 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 124222838 DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 124220628 DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 124212818 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D TFIIIA
E 124221098 zinc finger protein 436-like K09191 GTF3A; general transcription factor IIIA
D TFIIIB
E 124219656 TATA box-binding protein-like 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 124211961 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 124215419 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 124216813 transcription factor IIIB 90 kDa subunit isoform X1 K15196 BRF1; transcription factor IIIB 90 kDa subunit
E 124213345 transcription factor TFIIIB component B'' homolog isoform X1 K15198 BDP1; transcription factor TFIIIB component B''
D TFIIIC
E 124211420 uncharacterized protein LOC124211420 isoform X1 K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48]
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
E 124218628 snRNA-activating protein complex subunit 3 isoform X1 K15210 SNAPC3; snRNA-activating protein complex subunit 3
D Octamer transcription factors
D Others
E 124221072 zinc finger protein 143-like isoform X1 K20828 ZNF143_76; zinc finger protein 143/76
E 124214810 repressor of RNA polymerase III transcription MAF1 homolog K25817 MAF1; repressor of RNA polymerase III transcription MAF1
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E 124213771 DNA-directed RNA polymerase I subunit RPA1 isoform X1 K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
E 124224939 DNA-directed RNA polymerase I subunit RPA2 K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
E 124217503 DNA-directed RNA polymerases I and III subunit RPAC1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 124221349 probable DNA-directed RNA polymerases I and III subunit RPAC2 isoform X1 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
E 124222910 uncharacterized protein LOC124222910 K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49
E 124223897 DNA-directed RNA polymerase I subunit RPA43 K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43
E 124211301 DNA-directed RNA polymerase I subunit RPA12 K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12
D Pol I, II, III common subunits
E 124223134 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 124223133 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 124222838 DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 124220628 DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 124212818 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D SL1/TIF-1B
E 124219656 TATA box-binding protein-like 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 124211961 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 124215419 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C Other transcription-related factors
D UBF
D Transcription initiation factors
E 124222902 RNA polymerase I-specific transcription initiation factor RRN3 K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
E 124215671 neurofilament medium polypeptide isoform X1 K15223 UAF30; upstream activation factor subunit UAF30
D Transcription elongation factors
E 124211431 transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 124218247 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
E 124217177 chromatin-remodeling complex ATPase chain Iswi-like K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D CTDK-I complex
D Transcription termination factors
D Others
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
E 124211438 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E 124217861 general transcription factor IIE subunit 1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024