+D Messenger RNA Biogenesis KO
#
Prokaryotic Defense System - Nitratifractor salsuginis
%
!
ACRISPR-Cas system
B Universal Cas proteins
C Nitsa_1056 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
C Nitsa_1473 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C Nitsa_1474 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
C Nitsa_1055 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D Nitsa_1051 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D Nitsa_1054 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Nitsa_1045 protein of unknown function DUF57 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-B factors
D Nitsa_1048 CRISPR-associated protein TM1802 K19114 csh1; CRISPR-associated protein Csh1
D Nitsa_1049 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2
D Nitsa_1054 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Nitsa_1050 CRISPR-associated protein, Cas5h family K19116 cas5h; CRISPR-associated protein Cas5h
C Subtype I-C factors
D Nitsa_1054 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-D factors
D Nitsa_1054 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Nitsa_1045 protein of unknown function DUF57 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
D Nitsa_1472 CRISPR-associated protein, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
C Subtype II-A factors
C Subtype II-B factors
D Nitsa_1054 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
#
ARestriction and modification system (R-M system)
B Type I R-M system
C Nitsa_1293 protein of unknown function DUF450 K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C Nitsa_1299 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D Nitsa_0127 type II restriction-modification enzyme, R and M protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Nitsa_1376 Site-specific DNA-methyltransferase (adenine-specific) K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Nitsa_1817 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Nitsa_1823 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Nitsa_1180 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
C Nitsa_1799 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
#
AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D Nitsa_1252 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Nitsa_0691 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
D Nitsa_2054 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE
D Nitsa_2053 CopG domain protein DNA-binding domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Nitsa_0888 prevent-host-death family protein K18923 stbD; antitoxin StbD
C YafQ-dinJ
D Nitsa_1832 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
C YoeB-YefM
D Nitsa_1053 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Nitsa_1052 prevent-host-death family protein K19159 yefM; antitoxin YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
D Nitsa_0874 hypothetical protein K19163 ccdB; toxin CcdB
D Nitsa_0873 post-segregation antitoxin CcdA K19164 ccdA; antitoxin CcdA
C ParE-ParD
C Doc-Phd
C HigB-HigA
D Nitsa_0760 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Nitsa_0759 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D Nitsa_1436 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Nitsa_1220 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Nitsa_1315 Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Nitsa_1987 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
#
ADNA phosphothiolation system
B Sulfur modification proteins
C Nitsa_0007 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023