+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Nitratifractor salsuginis

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ACRISPR-Cas system B Universal Cas proteins C Nitsa_1056 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 C Nitsa_1473 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C Nitsa_1474 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 C Nitsa_1055 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D Nitsa_1051 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D Nitsa_1054 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Nitsa_1045 protein of unknown function DUF57 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-B factors D Nitsa_1048 CRISPR-associated protein TM1802 K19114 csh1; CRISPR-associated protein Csh1 D Nitsa_1049 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2 D Nitsa_1054 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Nitsa_1050 CRISPR-associated protein, Cas5h family K19116 cas5h; CRISPR-associated protein Cas5h C Subtype I-C factors D Nitsa_1054 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-D factors D Nitsa_1054 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Nitsa_1045 protein of unknown function DUF57 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins D Nitsa_1472 CRISPR-associated protein, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] C Subtype II-A factors C Subtype II-B factors D Nitsa_1054 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C Nitsa_1293 protein of unknown function DUF450 K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C Nitsa_1299 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D Nitsa_0127 type II restriction-modification enzyme, R and M protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Nitsa_1376 Site-specific DNA-methyltransferase (adenine-specific) K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Nitsa_1817 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D Nitsa_1823 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Nitsa_1180 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C Nitsa_1799 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D Nitsa_1252 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Nitsa_0691 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD D Nitsa_2054 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Nitsa_2053 CopG domain protein DNA-binding domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D Nitsa_0888 prevent-host-death family protein K18923 stbD; antitoxin StbD C YafQ-dinJ D Nitsa_1832 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] C YoeB-YefM D Nitsa_1053 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-] D Nitsa_1052 prevent-host-death family protein K19159 yefM; antitoxin YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA D Nitsa_0874 hypothetical protein K19163 ccdB; toxin CcdB D Nitsa_0873 post-segregation antitoxin CcdA K19164 ccdA; antitoxin CcdA C ParE-ParD C Doc-Phd C HigB-HigA D Nitsa_0760 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D Nitsa_0759 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D Nitsa_1436 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Nitsa_1220 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Nitsa_1315 Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Nitsa_1987 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C Nitsa_0007 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023