+D GENES KO
#
KEGG Orthology (KO) - Nitrospira tepida
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:nti00010]
D DNFV4_00555 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DNFV4_02541 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DNFV4_02538 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DNFV4_04279 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DNFV4_03079 fructose-1,6-bisphosphatase 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DNFV4_03078 Fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D DNFV4_04280 Fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D DNFV4_01380 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DNFV4_01382 glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DNFV4_01381 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DNFV4_00780 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DNFV4_04104 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DNFV4_03029 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DNFV4_04315 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DNFV4_04542 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DNFV4_02791 Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DNFV4_04268 Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DNFV4_04313 Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DNFV4_04267 Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DNFV4_04314 Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DNFV4_04266 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DNFV4_04316 Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DNFV4_02719 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04269 lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_01103 2-oxoglutarate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01265 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01099 2-oxoglutarate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01264 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01100 2-oxoglutarate:ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01263 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01262 Pyruvate:ferredoxin oxidoreductase epsilon subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DNFV4_04174 putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DNFV4_04627 Zinc-type alcohol dehydrogenase-like protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DNFV4_02804 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_04312 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_04003 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DNFV4_03082 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DNFV4_00026 Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
C 00020 Citrate cycle (TCA cycle) [PATH:nti00020]
D DNFV4_02487 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DNFV4_00068 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DNFV4_00333 2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DNFV4_01112 ATP citrate lyase, alpha subunit K15230 aclA; ATP-citrate lyase alpha-subunit [EC:2.3.3.8]
D DNFV4_01110 ATP-citrate lyase, beta subunit K15231 aclB; ATP-citrate lyase beta-subunit [EC:2.3.3.8]
D DNFV4_01113 Aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DNFV4_01114 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DNFV4_00265 Isocitrate dehydrogenase (NAD) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D DNFV4_02719 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04269 lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_01119 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DNFV4_01117 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DNFV4_00491 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DNFV4_02864 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DNFV4_02773 Succinate dehydrogenase, subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DNFV4_02489 fumarase C K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DNFV4_03680 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DNFV4_01521 Pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D DNFV4_01520 Pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D DNFV4_04268 Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DNFV4_04313 Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DNFV4_04267 Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DNFV4_04314 Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DNFV4_04266 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DNFV4_04316 Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DNFV4_01103 2-oxoglutarate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01265 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01099 2-oxoglutarate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01264 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01100 2-oxoglutarate:ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01263 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01262 Pyruvate:ferredoxin oxidoreductase epsilon subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:nti00030]
D DNFV4_02541 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DNFV4_01905 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNFV4_02574 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNFV4_03784 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNFV4_00556 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D DNFV4_02575 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DNFV4_00613 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DNFV4_02781 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DNFV4_00027 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DNFV4_00766 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DNFV4_01218 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DNFV4_00554 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D DNFV4_02540 putative phosphoketolase 1 K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D DNFV4_02189 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D DNFV4_00503 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D DNFV4_02190 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D DNFV4_04003 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DNFV4_03082 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DNFV4_01049 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DNFV4_01461 Glucose 1-dehydrogenase K22969 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D DNFV4_01417 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DNFV4_01420 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DNFV4_03510 Gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D DNFV4_00763 Glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DNFV4_03078 Fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D DNFV4_04280 Fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D DNFV4_03079 fructose-1,6-bisphosphatase 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DNFV4_02538 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DNFV4_04279 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:nti00040]
D DNFV4_03008 UDP-glucose 6-dehydrogenase AglM K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DNFV4_04134 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DNFV4_03145 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DNFV4_00613 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:nti00051]
D DNFV4_03083 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DNFV4_03082 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DNFV4_01231 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DNFV4_03494 NTP_transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DNFV4_00097 NTP_transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DNFV4_03105 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DNFV4_02999 NAD-dependent dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DNFV4_01205 Glucosyl-3-phosphoglycerate/mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D DNFV4_04198 Glucosyl-3-phosphoglycerate/mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D DNFV4_02538 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DNFV4_04279 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DNFV4_03079 fructose-1,6-bisphosphatase 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DNFV4_03078 Fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D DNFV4_04280 Fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D DNFV4_01380 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:nti00052]
D DNFV4_03566 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D DNFV4_03093 Nucleotide sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DNFV4_03868 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DNFV4_03145 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DNFV4_04003 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DNFV4_03082 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DNFV4_00555 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DNFV4_02538 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DNFV4_04279 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DNFV4_01811 putative alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D DNFV4_03243 putative alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:nti00053]
D DNFV4_03008 UDP-glucose 6-dehydrogenase AglM K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DNFV4_04134 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DNFV4_01417 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DNFV4_01420 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DNFV4_04163 putative 37.6 kDa protein in cld 5'region K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:nti00500]
D DNFV4_01811 putative alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D DNFV4_03243 putative alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D DNFV4_03145 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DNFV4_03010 Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D DNFV4_02253 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D DNFV4_04216 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D DNFV4_03022 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D DNFV4_03542 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DNFV4_04206 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DNFV4_01636 Maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D DNFV4_04390 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D DNFV4_03242 Aamy domain-containing protein K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D DNFV4_04207 Maltokinase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D DNFV4_04212 Trehalose synthase/amylase TreS K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D DNFV4_01608 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D DNFV4_04208 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D DNFV4_04228 Glycogen operon protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D DNFV4_04215 Malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D DNFV4_04227 Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D DNFV4_04211 Trehalose synthase K13057 treT; trehalose synthase [EC:2.4.1.245]
D DNFV4_00216 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D DNFV4_00217 Trehalose 6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D DNFV4_04003 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DNFV4_03082 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DNFV4_00555 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DNFV4_02541 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:nti00520]
D DNFV4_00416 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DNFV4_03036 L-glutamine--D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DNFV4_02677 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D DNFV4_03037 fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DNFV4_00600 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D DNFV4_03559 putative Phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D DNFV4_01274 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DNFV4_01032 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DNFV4_02987 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D DNFV4_03091 UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D DNFV4_02960 Protein CapL K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D DNFV4_00555 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DNFV4_00026 Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D DNFV4_04003 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DNFV4_03082 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DNFV4_03145 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DNFV4_03008 UDP-glucose 6-dehydrogenase AglM K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DNFV4_04134 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DNFV4_03566 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D DNFV4_03093 Nucleotide sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DNFV4_03868 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DNFV4_04163 putative 37.6 kDa protein in cld 5'region K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D DNFV4_02541 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DNFV4_01231 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DNFV4_03494 NTP_transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DNFV4_00097 NTP_transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DNFV4_03083 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DNFV4_03105 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DNFV4_02701 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D DNFV4_02999 NAD-dependent dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DNFV4_03010 Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D DNFV4_00994 FAD-binding FR-type domain-containing protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D DNFV4_02253 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D DNFV4_04216 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:nti00620]
D DNFV4_02804 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_04312 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_01103 2-oxoglutarate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01265 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01099 2-oxoglutarate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01264 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01100 2-oxoglutarate:ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01263 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01262 Pyruvate:ferredoxin oxidoreductase epsilon subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DNFV4_04268 Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DNFV4_04313 Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DNFV4_04267 Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DNFV4_04314 Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DNFV4_04266 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DNFV4_04316 Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DNFV4_02719 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04269 lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04174 putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DNFV4_04627 Zinc-type alcohol dehydrogenase-like protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D DNFV4_02539 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DNFV4_04315 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DNFV4_04542 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DNFV4_02900 acetyl-CoA carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DNFV4_02840 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DNFV4_02841 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DNFV4_01937 acetyl-CoA carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DNFV4_01598 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D DNFV4_03219 putative thiamine pyrophosphate-containing protein YdaP K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D DNFV4_00899 Glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D DNFV4_03500 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DNFV4_04534 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DNFV4_02481 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D DNFV4_01521 Pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D DNFV4_01520 Pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D DNFV4_03680 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DNFV4_02489 fumarase C K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DNFV4_02791 Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_01298 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DNFV4_04102 (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:nti00630]
D DNFV4_02804 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_04312 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_03680 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DNFV4_02487 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DNFV4_00068 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DNFV4_00333 2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DNFV4_01113 Aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_04051 VOC domain-containing protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DNFV4_00342 fragment of methylmalonyl-CoA mutase (part 1) K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D DNFV4_04540 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DNFV4_01484 (S)-ureidoglycine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D DNFV4_03552 glutamate synthase subunit GltB K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D DNFV4_01709 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DNFV4_00304 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DNFV4_00492 glycine decarboxylase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DNFV4_00515 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DNFV4_02719 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04269 lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_02718 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D DNFV4_00763 Glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DNFV4_01904 Cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D DNFV4_00462 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:nti00640]
D DNFV4_02804 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_04312 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_02539 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DNFV4_00345 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D DNFV4_02719 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04269 lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_01103 2-oxoglutarate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01265 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01099 2-oxoglutarate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01264 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01100 2-oxoglutarate:ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01263 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01262 Pyruvate:ferredoxin oxidoreductase epsilon subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DNFV4_04305 putative quinone oxidoreductase YhfP K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D DNFV4_02900 acetyl-CoA carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DNFV4_02840 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DNFV4_02841 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DNFV4_01937 acetyl-CoA carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DNFV4_04051 VOC domain-containing protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DNFV4_00342 fragment of methylmalonyl-CoA mutase (part 1) K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D DNFV4_01117 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DNFV4_01119 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DNFV4_00335 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D DNFV4_00334 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:nti00650]
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00343 putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DNFV4_00355 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DNFV4_00356 putative 2,3-dehydroadipyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D DNFV4_00133 putative Maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D DNFV4_00491 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DNFV4_02864 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DNFV4_02773 Succinate dehydrogenase, subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DNFV4_01103 2-oxoglutarate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01265 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01099 2-oxoglutarate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01264 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01100 2-oxoglutarate:ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01263 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01262 Pyruvate:ferredoxin oxidoreductase epsilon subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DNFV4_00337 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D DNFV4_01293 acetolactate synthase/acetohydroxybutanoate synthase, catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DNFV4_03522 Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DNFV4_01294 acetolactate synthase/acetohydroxybutanoate synthase, regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:nti00660]
D DNFV4_01293 acetolactate synthase/acetohydroxybutanoate synthase, catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DNFV4_03522 Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DNFV4_01294 acetolactate synthase/acetohydroxybutanoate synthase, regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DNFV4_01117 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DNFV4_01119 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DNFV4_04612 3-isopropylmalate dehydratase subunit LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DNFV4_04613 3-isopropylmalate dehydratase subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DNFV4_01300 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:nti00562]
D DNFV4_04615 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DNFV4_00239 putative Nus factor SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DNFV4_01008 1L-myo-inositol-1-phosphate cytidylyltransferase K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34]
D DNFV4_04429 Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D DNFV4_01380 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:nti00190]
D DNFV4_00406 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D DNFV4_00916 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D DNFV4_00405 NADH-quinone oxidoreductase subunit B 1 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D DNFV4_00915 NADH-quinone oxidoreductase subunit B 1 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D DNFV4_00404 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D DNFV4_00403 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D DNFV4_00914 NADH-quinone oxidoreductase subunit C/D 2 K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D DNFV4_00913 NADH-quinone oxidoreductase subunit E 2 K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D DNFV4_00912 NADH:quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D DNFV4_03678 NADH-quinone oxidoreductase subunit F 2 K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D DNFV4_00910 NADH:quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D DNFV4_00401 NADH-ubiquinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D DNFV4_00909 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D DNFV4_01877 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D DNFV4_00261 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D DNFV4_00400 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D DNFV4_00908 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D DNFV4_00398 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D DNFV4_00907 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D DNFV4_00397 NADH:quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D DNFV4_00906 NADH:quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D DNFV4_04647 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D DNFV4_00247 putative NADH-quinone oxidoreductase, subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D DNFV4_00905 NADH:quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D DNFV4_00395 NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D DNFV4_00396 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D DNFV4_00904 NADH-quinone oxidoreductase subunit N 2 K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D DNFV4_00394 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D DNFV4_03648 Type II NADH:quinone oxidoreductase Ndh K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D DNFV4_00028 Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D DNFV4_00491 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DNFV4_02864 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DNFV4_02773 Succinate dehydrogenase, subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DNFV4_01161 putative Quinol-cytochrome c reductase, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DNFV4_04374 Ubiquinol-cytochrome c reductase iron-sulfur subunit K03886 qcrA; quinol---cytochrome c reductase iron-sulfur subunit, bacillus type [EC:7.1.1.8]
D DNFV4_04373 Ubiquinol--cytochrome c reductase, fused cytochrome b/c subunit K03887 qcrB; quinol---cytochrome c reductase cytochrome b subunit, bacillus type [EC:7.1.1.8]
D DNFV4_01923 putative cytochrome c oxidase, fused subunits I, II, and III (modular protein) K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D DNFV4_01467 Cytochrome bd oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DNFV4_03268 Cytochrome bd quinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DNFV4_01163 hypothetical protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DNFV4_03343 hypothetical protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DNFV4_01468 Cytochrome bd oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DNFV4_03269 Cytochrome bd oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DNFV4_00575 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DNFV4_00577 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DNFV4_00576 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DNFV4_00574 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DNFV4_00578 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DNFV4_03883 ATP synthase F0, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DNFV4_03881 ATP synthase F0, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DNFV4_03882 ATP synthase F0, subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DNFV4_00059 V-type ATP synthase alpha chain 2 K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D DNFV4_00058 V-type ATP synthase beta chain 2 K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D DNFV4_00061 V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D DNFV4_00057 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D DNFV4_00062 V-type proton ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D DNFV4_00060 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D DNFV4_04617 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D DNFV4_00064 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D DNFV4_00063 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D DNFV4_03786 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D DNFV4_00986 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:nti00710]
D DNFV4_01381 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DNFV4_01382 glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DNFV4_03078 Fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D DNFV4_03079 fructose-1,6-bisphosphatase 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DNFV4_02781 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DNFV4_00027 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DNFV4_00554 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D DNFV4_01380 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DNFV4_00613 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DNFV4_00766 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DNFV4_01218 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DNFV4_02791 Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DNFV4_03680 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:nti00720]
D DNFV4_01103 2-oxoglutarate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01265 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01099 2-oxoglutarate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01264 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01100 2-oxoglutarate:ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01263 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01262 Pyruvate:ferredoxin oxidoreductase epsilon subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DNFV4_02791 Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D DNFV4_01521 Pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D DNFV4_01520 Pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D DNFV4_03680 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DNFV4_02489 fumarase C K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DNFV4_00491 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DNFV4_02864 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DNFV4_02773 Succinate dehydrogenase, subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DNFV4_01119 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DNFV4_01117 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_01114 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DNFV4_01113 Aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DNFV4_01112 ATP citrate lyase, alpha subunit K15230 aclA; ATP-citrate lyase alpha-subunit [EC:2.3.3.8]
D DNFV4_01110 ATP-citrate lyase, beta subunit K15231 aclB; ATP-citrate lyase beta-subunit [EC:2.3.3.8]
D DNFV4_02900 acetyl-CoA carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DNFV4_02840 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DNFV4_02841 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DNFV4_01937 acetyl-CoA carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DNFV4_04051 VOC domain-containing protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DNFV4_00342 fragment of methylmalonyl-CoA mutase (part 1) K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D DNFV4_00402 putative NADH-quinone oxidoreductase, subunit G K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D DNFV4_00911 NADH-quinone oxidoreductase K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D DNFV4_03864 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D DNFV4_01083 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DNFV4_01084 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DNFV4_02539 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DNFV4_02804 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_04312 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:nti00680]
D DNFV4_00402 putative NADH-quinone oxidoreductase, subunit G K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D DNFV4_00911 NADH-quinone oxidoreductase K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D DNFV4_00304 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DNFV4_01484 (S)-ureidoglycine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D DNFV4_00763 Glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DNFV4_03029 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DNFV4_03680 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DNFV4_03078 Fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D DNFV4_04280 Fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D DNFV4_03079 fructose-1,6-bisphosphatase 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DNFV4_02538 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DNFV4_04279 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D DNFV4_02539 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DNFV4_02804 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_04312 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_01103 2-oxoglutarate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01265 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01099 2-oxoglutarate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01264 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01100 2-oxoglutarate:ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01263 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01262 Pyruvate:ferredoxin oxidoreductase epsilon subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D DNFV4_00780 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DNFV4_04104 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DNFV4_03625 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DNFV4_04059 Phosphoserine phosphatase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D DNFV4_01005 Sulfopyruvate decarboxylase subunit beta K13039 comE; sulfopyruvate decarboxylase subunit beta [EC:4.1.1.79]
C 00910 Nitrogen metabolism [PATH:nti00910]
D DNFV4_01730 Nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DNFV4_01710 putative nitrate ABC transporter, nitrate binding protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D DNFV4_01711 Nitrate ABC transporter, integral membrane subunit (Modular protein) K15577 nrtB; nitrate/nitrite transport system permease protein
D DNFV4_01712 ABC transporter, ATP-binding protein NrtD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D DNFV4_00533 putative Nitrite oxidoreductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_00537 Putative Nitrite oxidoreductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_03896 putative Nitrite oxidoreductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_00532 putative Nitrite oxidoreductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_00536 putative Nitrite oxidoreductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_03895 putative Nitrite oxidoreductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_00624 HEPN domain-containing protein K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D DNFV4_01720 Ferredoxin--nitrite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D DNFV4_01907 Cytochrome c nitrite reductase, small subunit NrfH K15876 nrfH; cytochrome c nitrite reductase small subunit
D DNFV4_03388 Cytochrome C K15876 nrfH; cytochrome c nitrite reductase small subunit
D DNFV4_02779 Copper-containing nitrite reductase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D DNFV4_01719 putative octaheme cytochrome c K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6]
D DNFV4_00656 Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D DNFV4_01709 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DNFV4_03551 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DNFV4_03552 glutamate synthase subunit GltB K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D DNFV4_01713 Cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104]
C 00920 Sulfur metabolism [PATH:nti00920]
D DNFV4_02786 Sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DNFV4_02785 sulfate/thiosulfate ABC transporter inner membrane subunit CysU K02046 cysU; sulfate/thiosulfate transport system permease protein
D DNFV4_02784 sulfate/thiosulfate ABC transporter inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DNFV4_02783 Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DNFV4_00629 Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DNFV4_00628 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DNFV4_00252 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DNFV4_03785 ATP_transf domain-containing protein K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D DNFV4_00704 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DNFV4_04333 Adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DNFV4_00625 Adenosine 5'-phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D DNFV4_02155 Sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC
D DNFV4_00024 Sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC
D DNFV4_02154 Cytochrome c K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D DNFV4_00025 Cytochrome C K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D DNFV4_04376 Sulfide:quinone oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D DNFV4_03297 Sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DNFV4_03074 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DNFV4_02273 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DNFV4_00758 Methanethiol S-methyltransferase K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:nti00061]
D DNFV4_02900 acetyl-CoA carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DNFV4_02840 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DNFV4_02841 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DNFV4_01937 acetyl-CoA carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DNFV4_01076 acyl carrier protein K02078 acpP; acyl carrier protein
D DNFV4_02889 Acyl carrier protein K02078 acpP; acyl carrier protein
D DNFV4_04318 Acyl carrier protein K02078 acpP; acyl carrier protein
D DNFV4_01074 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DNFV4_01072 3-oxoacyl-[acyl carrier protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DNFV4_01133 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DNFV4_01077 3-oxoacyl-[acyl carrier protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNFV4_02890 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNFV4_03399 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNFV4_01075 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_02844 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_03701 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_03141 3-hydroxy-acyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DNFV4_00501 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DNFV4_00353 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:nti00071]
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00355 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DNFV4_00353 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DNFV4_01502 Acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D DNFV4_00204 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D DNFV4_04174 putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DNFV4_04627 Zinc-type alcohol dehydrogenase-like protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:nti00100]
D DNFV4_01587 Phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:nti00561]
D DNFV4_00763 Glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DNFV4_01071 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DNFV4_02926 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DNFV4_00643 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:nti00564]
D DNFV4_00829 Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D DNFV4_01815 putative Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D DNFV4_04381 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D DNFV4_02926 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DNFV4_00643 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DNFV4_03240 putative Phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D DNFV4_00224 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D DNFV4_01502 Acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D DNFV4_00808 Phosphatidylethanolamine N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D DNFV4_01834 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D DNFV4_01297 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DNFV4_01296 Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D DNFV4_02927 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D DNFV4_01044 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D DNFV4_03240 putative Phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:nti01040]
D DNFV4_01529 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D DNFV4_00548 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:nti00230]
D DNFV4_00513 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D DNFV4_02190 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D DNFV4_04003 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DNFV4_03082 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DNFV4_01049 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DNFV4_01744 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DNFV4_02913 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D DNFV4_01542 phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DNFV4_01743 Phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D DNFV4_01738 Phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D DNFV4_01739 Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DNFV4_01541 phosphoribosylformylglycinamide cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D DNFV4_03911 N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D DNFV4_03912 N(5)-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D DNFV4_01736 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D DNFV4_01735 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DNFV4_02912 bifunctional AICAR transformylase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DNFV4_01600 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DNFV4_00748 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D DNFV4_04098 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DNFV4_04494 Haloacid dehalogenase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D DNFV4_01037 Purine nucleoside phosphorylase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DNFV4_02674 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D DNFV4_01769 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DNFV4_02716 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DNFV4_02312 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D DNFV4_01770 GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DNFV4_02497 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D DNFV4_01887 Vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DNFV4_02032 Vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DNFV4_02353 Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DNFV4_03308 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DNFV4_01758 putative Exopolyphosphatase 2 K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D DNFV4_02461 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D DNFV4_00797 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DNFV4_03667 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DNFV4_03872 2',3'-cyclic-nucleotide 2'-phosphodiesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D DNFV4_01680 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DNFV4_01819 Nucleoside-triphosphatase THEP1 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D DNFV4_01535 Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DNFV4_03785 ATP_transf domain-containing protein K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D DNFV4_01092 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D DNFV4_00629 Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DNFV4_00704 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DNFV4_04333 Adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DNFV4_00628 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DNFV4_00252 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DNFV4_00203 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 00240 Pyrimidine metabolism [PATH:nti00240]
D DNFV4_02939 carbamoyl phosphate synthetase subunit beta K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DNFV4_02942 carbamoyl phosphate synthetase subunit alpha K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DNFV4_02945 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DNFV4_02944 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DNFV4_01367 Dihydroorotate dehydrogenase A (fumarate) K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D DNFV4_00348 hypothetical protein K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DNFV4_00388 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DNFV4_04488 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D DNFV4_02652 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D DNFV4_02716 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DNFV4_01535 Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DNFV4_03903 dTTP/UTP pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DNFV4_02930 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D DNFV4_00642 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D DNFV4_00748 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D DNFV4_04098 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DNFV4_02946 Pyrimidine operon regulatory protein / Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DNFV4_03872 2',3'-cyclic-nucleotide 2'-phosphodiesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D DNFV4_03696 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D DNFV4_01887 Vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DNFV4_02032 Vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DNFV4_02353 Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DNFV4_02459 putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D DNFV4_02460 putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D DNFV4_03039 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:nti00250]
D DNFV4_02917 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DNFV4_03888 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DNFV4_04591 putative Isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DNFV4_02228 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_02695 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_02967 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_02988 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_03089 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_03094 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_03607 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_03612 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_04436 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_01484 (S)-ureidoglycine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D DNFV4_01596 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DNFV4_00775 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DNFV4_00774 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DNFV4_00797 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DNFV4_03667 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DNFV4_01735 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DNFV4_02945 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DNFV4_03551 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DNFV4_00656 Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D DNFV4_02846 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DNFV4_01709 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DNFV4_02939 carbamoyl phosphate synthetase subunit beta K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DNFV4_02942 carbamoyl phosphate synthetase subunit alpha K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DNFV4_01739 Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DNFV4_03036 L-glutamine--D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DNFV4_01744 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:nti00260]
D DNFV4_04103 Aspartate kinase Ask_LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DNFV4_01302 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DNFV4_04106 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DNFV4_04059 Phosphoserine phosphatase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D DNFV4_02271 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DNFV4_04105 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DNFV4_02578 L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D DNFV4_00304 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DNFV4_01484 (S)-ureidoglycine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D DNFV4_00763 Glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D DNFV4_00780 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DNFV4_04104 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DNFV4_03625 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DNFV4_03629 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DNFV4_04178 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DNFV4_04177 threonine dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D DNFV4_03791 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DNFV4_00142 putative Flavin-containing monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DNFV4_00492 glycine decarboxylase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DNFV4_00515 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DNFV4_02719 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04269 lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_02718 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D DNFV4_01297 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DNFV4_02373 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DNFV4_02372 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DNFV4_00723 putative L-lysine N(6)-monooxygenase (NADPH) K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:nti00270]
D DNFV4_03074 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DNFV4_02273 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D DNFV4_02307 cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DNFV4_01125 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DNFV4_01142 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D DNFV4_03477 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D DNFV4_01037 Purine nucleoside phosphorylase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DNFV4_02703 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D DNFV4_01124 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DNFV4_04103 Aspartate kinase Ask_LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DNFV4_01302 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DNFV4_04106 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DNFV4_02269 FeS-binding protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D DNFV4_01378 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_03001 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_03886 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_02917 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DNFV4_03297 Sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DNFV4_03680 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DNFV4_03625 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:nti00280]
D DNFV4_01378 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_03001 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_03886 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_00345 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D DNFV4_02719 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04269 lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04051 VOC domain-containing protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DNFV4_00342 fragment of methylmalonyl-CoA mutase (part 1) K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D DNFV4_01438 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D DNFV4_02337 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D DNFV4_00339 Biotin-dependent 3-methylcrotonyl-coenzyme A carboxylase beta1 subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D DNFV4_00338 Enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D DNFV4_00337 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:nti00290]
D DNFV4_04612 3-isopropylmalate dehydratase subunit LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DNFV4_04613 3-isopropylmalate dehydratase subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DNFV4_01300 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D DNFV4_01293 acetolactate synthase/acetohydroxybutanoate synthase, catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DNFV4_03522 Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DNFV4_01294 acetolactate synthase/acetohydroxybutanoate synthase, regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DNFV4_01295 Ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DNFV4_03601 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DNFV4_01378 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_03001 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_03886 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_01298 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DNFV4_04102 (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:nti00300]
D DNFV4_04106 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DNFV4_04103 Aspartate kinase Ask_LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DNFV4_01302 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DNFV4_00771 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DNFV4_00770 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D DNFV4_00777 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DNFV4_00898 Diaminopimelate epimerase 2 K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DNFV4_00803 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DNFV4_00772 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DNFV4_01025 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DNFV4_01026 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:nti00310]
D DNFV4_04052 Aldehyde dehydrogenase (NAD(+)) K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D DNFV4_02719 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04269 lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_03695 L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D DNFV4_04124 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:nti00220]
D DNFV4_00776 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DNFV4_00775 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DNFV4_00774 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DNFV4_00826 NG,NG-dimethylarginine dimethylaminohydrolase 1 K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D DNFV4_01739 Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DNFV4_01709 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DNFV4_02939 carbamoyl phosphate synthetase subunit beta K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DNFV4_02942 carbamoyl phosphate synthetase subunit alpha K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DNFV4_00656 Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D DNFV4_02917 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DNFV4_02655 Glutamate N-acetyltransferase / Amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D DNFV4_00446 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D DNFV4_02656 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D DNFV4_00777 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:nti00330]
D DNFV4_03919 putative pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D DNFV4_02212 N-carbamoylputrescine amidase / Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D DNFV4_02213 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D DNFV4_03791 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DNFV4_00142 putative Flavin-containing monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DNFV4_00826 NG,NG-dimethylarginine dimethylaminohydrolase 1 K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D DNFV4_01039 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D DNFV4_02815 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D DNFV4_02846 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DNFV4_01374 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DNFV4_02628 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D DNFV4_02948 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D DNFV4_02917 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DNFV4_04124 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:nti00340]
D DNFV4_01275 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D DNFV4_03624 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D DNFV4_01282 putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D DNFV4_01280 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D DNFV4_01278 Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D DNFV4_01281 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D DNFV4_01277 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D DNFV4_00638 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DNFV4_01276 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D DNFV4_04155 Formimidoyltetrahydrofolate cyclodeaminase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D DNFV4_03791 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DNFV4_00142 putative Flavin-containing monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:nti00350]
D DNFV4_02917 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DNFV4_00638 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DNFV4_00350 putative dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D DNFV4_03791 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DNFV4_00142 putative Flavin-containing monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DNFV4_04174 putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DNFV4_04627 Zinc-type alcohol dehydrogenase-like protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:nti00360]
D DNFV4_03791 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DNFV4_00142 putative Flavin-containing monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DNFV4_00343 putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DNFV4_02917 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DNFV4_00638 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DNFV4_04124 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DNFV4_00204 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:nti00380]
D DNFV4_00360 Tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D DNFV4_01904 Cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D DNFV4_00361 Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D DNFV4_02719 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04269 lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_03791 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D DNFV4_00142 putative Flavin-containing monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:nti00400]
D DNFV4_03058 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DNFV4_00639 Phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DNFV4_01700 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D DNFV4_02838 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D DNFV4_00665 Shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D DNFV4_00666 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DNFV4_00641 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DNFV4_01773 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D DNFV4_02366 Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DNFV4_02367 aminodeoxychorismate synthase subunit 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DNFV4_00627 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D DNFV4_02368 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D DNFV4_02371 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D DNFV4_02369 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D DNFV4_02373 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DNFV4_02372 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DNFV4_00637 Chorismate mutase / Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D DNFV4_00640 Prephenate/arogenate dehydrogenase domain-containing protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DNFV4_02917 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DNFV4_00638 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:nti00410]
D DNFV4_03034 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D DNFV4_00801 Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:nti00430]
D DNFV4_01596 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DNFV4_02539 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DNFV4_00332 Long-chain fatty acid--CoA ligase K26005 sauT; sulfoacetate-CoA ligase [EC:6.2.1.-]
C 00440 Phosphonate and phosphinate metabolism [PATH:nti00440]
D DNFV4_01001 Phosphoenolpyruvate mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D DNFV4_01006 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:nti00450]
D DNFV4_02307 cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DNFV4_01400 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DNFV4_00629 Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DNFV4_00628 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DNFV4_00252 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DNFV4_03041 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:nti00460]
D DNFV4_04591 putative Isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DNFV4_00304 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:nti00470]
D DNFV4_02650 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DNFV4_04124 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DNFV4_00744 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_01033 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_04224 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_01739 Phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D DNFV4_01028 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DNFV4_00898 Diaminopimelate epimerase 2 K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DNFV4_00772 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:nti00480]
D DNFV4_02623 5-oxoprolinase component A K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D DNFV4_00415 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DNFV4_01114 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DNFV4_02575 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DNFV4_01905 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNFV4_02574 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNFV4_03784 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNFV4_01584 Hydroperoxy fatty acid reductase gpx1 K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:nti00540]
D DNFV4_03140 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DNFV4_00240 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DNFV4_02888 UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DNFV4_03139 UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DNFV4_03137 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DNFV4_03133 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DNFV4_02928 D-arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DNFV4_02929 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DNFV4_03084 2-keto-3-deoxy-D-glycero-D-galacto-9-phosphonononic acid phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DNFV4_02931 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DNFV4_03134 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DNFV4_02137 putative enzyme K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D DNFV4_02233 Acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D DNFV4_02009 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DNFV4_04577 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DNFV4_00244 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DNFV4_02932 D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D DNFV4_04582 ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D DNFV4_03131 Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D DNFV4_03132 Lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DNFV4_03338 hypothetical protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis [PATH:nti00542]
D DNFV4_02702 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DNFV4_03605 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:nti00541]
D DNFV4_03145 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DNFV4_03093 Nucleotide sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DNFV4_03868 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DNFV4_03008 UDP-glucose 6-dehydrogenase AglM K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DNFV4_04134 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DNFV4_04163 putative 37.6 kDa protein in cld 5'region K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D DNFV4_03002 dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DNFV4_03120 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DNFV4_02989 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03009 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03107 dTDP-glucose 4,6-dehydratase 1 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03973 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DNFV4_03104 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DNFV4_04636 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DNFV4_03010 Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D DNFV4_00994 FAD-binding FR-type domain-containing protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D DNFV4_03083 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DNFV4_01231 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DNFV4_03494 NTP_transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DNFV4_00097 NTP_transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DNFV4_03105 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DNFV4_02999 NAD-dependent dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DNFV4_02701 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D DNFV4_03037 fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DNFV4_02987 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D DNFV4_02960 Protein CapL K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D DNFV4_03091 UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:nti00550]
D DNFV4_01274 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DNFV4_01032 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DNFV4_01031 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DNFV4_01028 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DNFV4_01025 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DNFV4_00744 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_01033 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_04224 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_01026 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DNFV4_01835 ditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific] K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DNFV4_01356 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DNFV4_03053 acidPPc domain-containing protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DNFV4_01027 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DNFV4_01030 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DNFV4_04589 Biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DNFV4_03717 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DNFV4_03957 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DNFV4_01312 Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DNFV4_01024 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DNFV4_00652 putative Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:nti00552]
D DNFV4_01356 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DNFV4_03053 acidPPc domain-containing protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DNFV4_02702 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DNFV4_03605 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:nti00543]
D DNFV4_02702 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DNFV4_03605 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DNFV4_03074 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:nti00730]
D DNFV4_01352 phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D DNFV4_01512 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D DNFV4_03951 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DNFV4_01399 putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D DNFV4_01149 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DNFV4_03157 Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D DNFV4_01351 Thiamine thiazole synthase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D DNFV4_02842 Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DNFV4_03156 putative thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DNFV4_03147 Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D DNFV4_01819 Nucleoside-triphosphatase THEP1 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D DNFV4_01680 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DNFV4_01516 Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:nti00740]
D DNFV4_01732 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase-2 K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DNFV4_02792 Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DNFV4_01733 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D DNFV4_02799 Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D DNFV4_02672 Riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D DNFV4_00513 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:nti00750]
D DNFV4_04108 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D DNFV4_02271 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DNFV4_04105 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:nti00760]
D DNFV4_03888 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DNFV4_01353 Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D DNFV4_02200 putative nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D DNFV4_04301 Nicotinate phosphoribosyltransferase pncB2 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D DNFV4_00748 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D DNFV4_04098 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DNFV4_01373 putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D DNFV4_01535 Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DNFV4_01704 Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D DNFV4_00055 Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D DNFV4_04300 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D DNFV4_02205 protein-lysine deacetylase/desuccinylase/lipoamidase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D DNFV4_02491 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D DNFV4_01220 putative soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D DNFV4_01517 putative soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D DNFV4_02771 putative soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D DNFV4_00133 putative Maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:nti00770]
D DNFV4_01293 acetolactate synthase/acetohydroxybutanoate synthase, catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DNFV4_03522 Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DNFV4_01294 acetolactate synthase/acetohydroxybutanoate synthase, regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DNFV4_01295 Ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DNFV4_03601 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DNFV4_01085 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D DNFV4_02206 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D DNFV4_00801 Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DNFV4_02198 Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D DNFV4_02499 fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D DNFV4_01535 Nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D DNFV4_02918 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D DNFV4_01401 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D DNFV4_02222 putative 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D DNFV4_01378 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_03001 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_03886 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_03034 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:nti00780]
D DNFV4_01077 3-oxoacyl-[acyl carrier protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNFV4_02890 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNFV4_03399 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNFV4_01075 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_02844 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_03701 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_03141 3-hydroxy-acyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DNFV4_00501 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DNFV4_02935 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DNFV4_02843 ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D DNFV4_01370 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D DNFV4_02199 Biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:nti00785]
D DNFV4_00657 Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D DNFV4_02851 Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D DNFV4_02719 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04269 lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04268 Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DNFV4_04313 Pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DNFV4_04267 Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DNFV4_04314 Pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DNFV4_04266 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DNFV4_04316 Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DNFV4_00345 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D DNFV4_00492 glycine decarboxylase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DNFV4_00515 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DNFV4_02718 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:nti00790]
D DNFV4_03674 GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D DNFV4_01345 putative Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D DNFV4_00802 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D DNFV4_02676 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DNFV4_01938 Dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DNFV4_00264 putative Bifunctional protein FolC: Folylpolyglutamate synthase and Dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DNFV4_01732 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase-2 K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DNFV4_03885 Anthranilate synthase component 1 K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D DNFV4_03675 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DNFV4_03967 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DNFV4_00234 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D DNFV4_00414 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D DNFV4_01602 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D DNFV4_01097 NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DNFV4_00761 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D DNFV4_03765 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D DNFV4_01935 GTP 3',8-cyclase 3 K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DNFV4_01933 cyclic pyranopterin monophosphate synthase K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DNFV4_01934 Molybdopterin synthase K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D DNFV4_02636 Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DNFV4_03062 Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DNFV4_03390 Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:nti00670]
D DNFV4_03864 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D DNFV4_01083 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DNFV4_00304 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DNFV4_01542 phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DNFV4_02912 bifunctional AICAR transformylase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DNFV4_04155 Formimidoyltetrahydrofolate cyclodeaminase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D DNFV4_00611 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DNFV4_00515 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DNFV4_02307 cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DNFV4_00462 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D DNFV4_01084 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DNFV4_03715 5-FCL-like protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:nti00860]
D DNFV4_03948 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DNFV4_02667 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D DNFV4_04550 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DNFV4_02671 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DNFV4_02668 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D DNFV4_04168 Uroporphyrinogen III methyltransferase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D DNFV4_01530 Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D DNFV4_01532 Coproporphyrinogen III oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D DNFV4_01531 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D DNFV4_02669 Uroporphyrinogen-III methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D DNFV4_02645 Siroheme synthase / Precorrin-2 oxidase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D DNFV4_00871 Radical SAM domain heme biosynthesis protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D DNFV4_04462 Cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D DNFV4_02875 Corrinoid adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DNFV4_04461 Corrinoid adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DNFV4_02874 Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D DNFV4_04456 Cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D DNFV4_04459 Bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D DNFV4_04457 Adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D DNFV4_04458 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D DNFV4_04455 L-threonine 3-O-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D DNFV4_01317 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D DNFV4_01318 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:nti00130]
D DNFV4_01168 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D DNFV4_00874 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DNFV4_04438 Class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DNFV4_03305 NAD(P)H-dependent oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:nti00900]
D DNFV4_01149 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DNFV4_01833 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D DNFV4_03076 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D DNFV4_01048 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D DNFV4_03075 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D DNFV4_01150 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D DNFV4_01138 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00977 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DNFV4_03555 Octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DNFV4_01835 ditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific] K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:nti00909]
D DNFV4_01587 Phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
D DNFV4_01141 Squalene--hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:nti00906]
D DNFV4_01883 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
D DNFV4_00337 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D DNFV4_02781 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DNFV4_00027 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:nti00523]
D DNFV4_03002 dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DNFV4_03120 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DNFV4_02989 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03009 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03107 dTDP-glucose 4,6-dehydratase 1 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03973 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DNFV4_03104 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DNFV4_04636 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D DNFV4_02989 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03009 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03107 dTDP-glucose 4,6-dehydratase 1 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:nti00332]
D DNFV4_01374 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DNFV4_02628 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D DNFV4_02948 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:nti00261]
D DNFV4_00629 Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D DNFV4_00628 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DNFV4_00252 Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DNFV4_04103 Aspartate kinase Ask_LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DNFV4_01302 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DNFV4_00771 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DNFV4_00770 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:nti00521]
D DNFV4_00555 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DNFV4_04003 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DNFV4_03082 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DNFV4_04615 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DNFV4_00239 putative Nus factor SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DNFV4_04429 Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D DNFV4_03002 dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DNFV4_03120 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DNFV4_02989 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03009 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03107 dTDP-glucose 4,6-dehydratase 1 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03973 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DNFV4_03104 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DNFV4_04636 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D DNFV4_00555 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:nti00525]
D DNFV4_03002 dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DNFV4_03120 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DNFV4_02989 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03009 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DNFV4_03107 dTDP-glucose 4,6-dehydratase 1 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:nti00401]
D DNFV4_00640 Prephenate/arogenate dehydrogenase domain-containing protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DNFV4_02917 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DNFV4_00638 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:nti00405]
D DNFV4_02634 Phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D DNFV4_02366 Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DNFV4_02367 aminodeoxychorismate synthase subunit 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D DNFV4_01074 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DNFV4_01075 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_02844 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_03701 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_00501 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:nti00998]
D DNFV4_01076 acyl carrier protein K02078 acpP; acyl carrier protein
D DNFV4_02889 Acyl carrier protein K02078 acpP; acyl carrier protein
D DNFV4_04318 Acyl carrier protein K02078 acpP; acyl carrier protein
D DNFV4_01001 Phosphoenolpyruvate mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:nti00999]
D DNFV4_01125 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DNFV4_00665 Shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:nti00362]
D DNFV4_00020 Glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D DNFV4_02163 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DNFV4_03848 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DNFV4_00132 putative tautomerase K2 K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DNFV4_01222 putative Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D DNFV4_00204 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D DNFV4_03677 reduced ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D DNFV4_03949 2Fe-2S iron-sulfur cluster binding domain-containing protein K04755 fdx; ferredoxin, 2Fe-2S
D DNFV4_00355 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DNFV4_00343 putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D DNFV4_01598 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation [PATH:nti00364]
D DNFV4_01838 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D DNFV4_02422 putative Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:nti00625]
D DNFV4_04174 putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DNFV4_04627 Zinc-type alcohol dehydrogenase-like protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:nti00361]
D DNFV4_01838 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D DNFV4_02422 putative Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D DNFV4_00020 Glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation [PATH:nti00623]
D DNFV4_01838 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D DNFV4_02422 putative Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:nti00622]
D DNFV4_00020 Glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D DNFV4_02163 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DNFV4_03848 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DNFV4_00132 putative tautomerase K2 K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:nti00633]
D DNFV4_01998 [NiFe] hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D DNFV4_01997 [NiFe] hydrogenase small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D DNFV4_01103 2-oxoglutarate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01265 Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D DNFV4_01099 2-oxoglutarate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01264 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D DNFV4_01100 2-oxoglutarate:ferredoxin oxidoreductase gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01263 Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D DNFV4_01262 Pyruvate:ferredoxin oxidoreductase epsilon subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:nti00643]
D DNFV4_00350 putative dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D DNFV4_00020 Glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D DNFV4_01417 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DNFV4_01420 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D DNFV4_02163 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DNFV4_03848 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DNFV4_00132 putative tautomerase K2 K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:nti00626]
D DNFV4_04174 putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DNFV4_04627 Zinc-type alcohol dehydrogenase-like protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D DNFV4_01222 putative Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:nti03020]
D DNFV4_01652 RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DNFV4_01653 RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DNFV4_01687 RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DNFV4_02498 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:nti03010]
D DNFV4_00644 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DNFV4_02654 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DNFV4_01665 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DNFV4_01686 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DNFV4_01676 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DNFV4_01066 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DNFV4_01655 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DNFV4_01673 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DNFV4_02657 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DNFV4_01658 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DNFV4_01685 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DNFV4_01654 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DNFV4_01684 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DNFV4_01672 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D DNFV4_04117 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DNFV4_03169 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DNFV4_01668 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DNFV4_01068 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DNFV4_01663 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DNFV4_04489 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DNFV4_04154 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DNFV4_01650 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DNFV4_01662 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DNFV4_01659 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DNFV4_01660 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DNFV4_01671 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DNFV4_01674 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DNFV4_00305 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DNFV4_01651 50S ribosomal protein L7/L12 / 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DNFV4_01649 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DNFV4_02658 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DNFV4_01669 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DNFV4_01678 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DNFV4_01666 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DNFV4_01688 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DNFV4_01675 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DNFV4_03166 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DNFV4_00616 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DNFV4_01377 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DNFV4_01664 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DNFV4_01661 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DNFV4_01670 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DNFV4_01050 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D DNFV4_01376 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DNFV4_02868 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DNFV4_01667 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DNFV4_01677 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DNFV4_01271 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DNFV4_01070 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DNFV4_01645 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DNFV4_00562 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DNFV4_00617 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DNFV4_01683 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:nti00970]
D DNFV4_03948 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DNFV4_03033 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DNFV4_03030 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DNFV4_03035 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DNFV4_03945 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DNFV4_02186 alanine--tRNA ligase/DNA-binding transcriptional repressor K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DNFV4_01772 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DNFV4_01021 Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DNFV4_02788 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DNFV4_02789 Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DNFV4_00619 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DNFV4_02565 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DNFV4_04096 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DNFV4_03041 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DNFV4_00611 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DNFV4_02201 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DNFV4_04492 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DNFV4_01354 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DNFV4_02377 lysine--tRNA ligase/Ap4A synthetase/Ap3A synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DNFV4_03337 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DNFV4_01831 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DNFV4_04657 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DNFV4_00614 Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DNFV4_00615 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DNFV4_02721 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DNFV4_03492 Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:nti03060]
D DNFV4_01679 Sec translocon subunit SecY K03076 secY; preprotein translocase subunit SecY
D DNFV4_01647 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DNFV4_01379 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D DNFV4_03334 Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D DNFV4_03333 Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D DNFV4_03335 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D DNFV4_00565 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNFV4_01062 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNFV4_00926 protein translocation ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DNFV4_03170 signal recognition particle protein component K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DNFV4_04077 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D DNFV4_03322 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_04066 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_04067 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_04219 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_01959 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D DNFV4_03393 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D DNFV4_02933 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DNFV4_01355 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:nti04122]
D DNFV4_03951 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DNFV4_03297 Sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DNFV4_00573 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DNFV4_01934 Molybdopterin synthase K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D DNFV4_01935 GTP 3',8-cyclase 3 K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DNFV4_02270 Molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D DNFV4_02268 molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D DNFV4_01933 cyclic pyranopterin monophosphate synthase K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DNFV4_02636 Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DNFV4_03062 Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DNFV4_01399 putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D DNFV4_02274 Thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D DNFV4_03158 Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D DNFV4_03567 Thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D DNFV4_02267 M67 family metallopeptidase K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome [PATH:nti03050]
D DNFV4_01211 Bacterial proteasome-activating AAA-ATPase (PAN) K13527 mpa; proteasome-associated ATPase
D DNFV4_03155 Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
D DNFV4_01215 hypothetical protein K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D DNFV4_03152 Proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D DNFV4_01214 Proteasome subunit alpha K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D DNFV4_03153 Proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:nti03018]
D DNFV4_03029 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DNFV4_04116 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DNFV4_03560 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DNFV4_01270 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DNFV4_03873 Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DNFV4_02196 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNFV4_03955 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNFV4_01727 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DNFV4_00986 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:nti03030]
D DNFV4_02901 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNFV4_03553 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNFV4_00435 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNFV4_03040 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DNFV4_04490 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DNFV4_02021 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNFV4_00002 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNFV4_03623 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DNFV4_01284 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DNFV4_04326 putative DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D DNFV4_01067 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02106 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02114 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02116 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_00365 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DNFV4_00368 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DNFV4_03165 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DNFV4_01288 Ribonuclease K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D DNFV4_04149 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNFV4_02362 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:nti03410]
D DNFV4_01818 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DNFV4_02495 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DNFV4_04153 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DNFV4_02344 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DNFV4_00968 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D DNFV4_01109 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DNFV4_03819 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DNFV4_00170 Transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D DNFV4_03762 3-methyl-adenine DNA glycosylase I, constitutive K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DNFV4_00507 G:T/U mismatch-specific uracil/thymine DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D DNFV4_00765 Type-5 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DNFV4_04602 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DNFV4_04149 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNFV4_03309 Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DNFV4_02362 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:nti03420]
D DNFV4_04585 Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DNFV4_00878 excision nuclease subunit A K03701 uvrA; excinuclease ABC subunit A
D DNFV4_03293 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D DNFV4_03177 excision nuclease subunit B K03702 uvrB; excinuclease ABC subunit B
D DNFV4_00897 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D DNFV4_01638 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DNFV4_04149 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNFV4_02362 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:nti03430]
D DNFV4_04112 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DNFV4_01384 Endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D DNFV4_03479 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D DNFV4_01638 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DNFV4_03871 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DNFV4_03870 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DNFV4_03309 Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DNFV4_01067 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02106 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02114 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02116 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02901 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNFV4_03553 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNFV4_02021 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNFV4_00002 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNFV4_00435 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNFV4_04490 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DNFV4_03040 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DNFV4_02362 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:nti03440]
D DNFV4_03309 Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DNFV4_01067 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02106 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02114 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02116 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_03025 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DNFV4_00437 DNA repair protein RecR K06187 recR; recombination protein RecR
D DNFV4_02184 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D DNFV4_04149 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNFV4_00634 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DNFV4_00636 Holliday junction branch migration complex subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DNFV4_01756 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DNFV4_02050 putative ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DNFV4_02901 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNFV4_03553 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNFV4_02021 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNFV4_00002 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNFV4_00435 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNFV4_04490 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DNFV4_03040 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DNFV4_00409 putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:nti03450]
D DNFV4_03252 Non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku
D DNFV4_03251 3'-phosphoesterase / DNA ligase D / DNA repair polymerase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:nti02010]
D DNFV4_02786 Sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DNFV4_02785 sulfate/thiosulfate ABC transporter inner membrane subunit CysU K02046 cysU; sulfate/thiosulfate transport system permease protein
D DNFV4_02784 sulfate/thiosulfate ABC transporter inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DNFV4_02783 Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DNFV4_01710 putative nitrate ABC transporter, nitrate binding protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D DNFV4_01711 Nitrate ABC transporter, integral membrane subunit (Modular protein) K15577 nrtB; nitrate/nitrite transport system permease protein
D DNFV4_01712 ABC transporter, ATP-binding protein NrtD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D DNFV4_01975 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) K02020 modA; molybdate transport system substrate-binding protein
D DNFV4_01978 Molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DNFV4_01985 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) K02020 modA; molybdate transport system substrate-binding protein
D DNFV4_01981 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D DNFV4_01982 Molybdate/tungstate import ATP-binding protein WtpC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DNFV4_01330 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D DNFV4_01329 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D DNFV4_01328 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DNFV4_02258 ABC transporter, periplasmic spermidine putrescine-binding protein potD (TC_3.A.1.11.1) K11069 potD; spermidine/putrescine transport system substrate-binding protein
D DNFV4_02256 spermidine preferential ABC transporter membrane subunit PotB K11071 potB; spermidine/putrescine transport system permease protein
D DNFV4_02255 putrescine ABC transporter ATP binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D DNFV4_02257 putrescine ABC transporter membrane subunit PotI K11074 potI; putrescine transport system permease protein
D DNFV4_03596 sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DNFV4_03593 Trehalose/maltose-binding protein MalE K10236 thuE; trehalose/maltose transport system substrate-binding protein
D DNFV4_03594 Trehalose/maltose transport system permease protein MalF K10237 thuF; trehalose/maltose transport system permease protein
D DNFV4_03595 Trehalose/maltose transport system permease protein MalG K10238 thuG; trehalose/maltose transport system permease protein
D DNFV4_01146 putative ABC transporter, auxiliary component, ATP-dependent toluene efflux transporter K07323 mlaC; phospholipid transport system substrate-binding protein
D DNFV4_04449 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DNFV4_04483 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DNFV4_01145 Outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DNFV4_04395 MlaD domain-containing protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DNFV4_01143 intermembrane phospholipid transport system, integral membrane subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DNFV4_04397 STAS domain-containing protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DNFV4_01144 intermembrane phospholipid transport system, ATP binding subunit MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DNFV4_04396 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DNFV4_01523 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_02464 Protein SphX K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_02469 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_04050 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_02465 Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D DNFV4_02466 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D DNFV4_02467 phosphate ABC transporter ATP binding subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DNFV4_02776 PBPb domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D DNFV4_02142 putative Leu/Ile/Val-binding protein, periplasmic-binding component of ABC transport system K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DNFV4_03381 Twin-arginine translocation signal domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DNFV4_04464 Hemin import ATP-binding protein HmuV K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D DNFV4_00597 Manganese transport system membrane protein MntC K19976 mntB; manganese transport system permease protein
D DNFV4_00598 Manganese transport system ATP-binding protein MntB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D DNFV4_03013 Transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DNFV4_03100 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D DNFV4_03610 Transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DNFV4_00581 ABC transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DNFV4_03012 ABC transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DNFV4_03609 ABC transporter domain-containing protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DNFV4_03099 ABC transporter domain-containing protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D DNFV4_02376 Lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D DNFV4_02375 lipoprotein release complex - ATP binding subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DNFV4_02892 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D DNFV4_02891 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D DNFV4_01691 lipopolysaccharide transport system ATP binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DNFV4_03162 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DNFV4_03163 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DNFV4_03136 ATP-dependent lipid A-core flippase K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DNFV4_03893 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DNFV4_01845 Toxin RTX-I translocation ATP-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D DNFV4_00037 membrane protein of unknown function K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:nti03070]
D DNFV4_01963 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D DNFV4_03278 putative Outer membrane efflux protein K12340 tolC; outer membrane protein
D DNFV4_01846 putative Leukotoxin secretion protein D K11003 hlyD; membrane fusion protein, hemolysin D
D DNFV4_00035 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D DNFV4_01845 Toxin RTX-I translocation ATP-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D DNFV4_00037 membrane protein of unknown function K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D DNFV4_02455 putative general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D DNFV4_02959 TPR_REGION domain-containing protein K02453 gspD; general secretion pathway protein D
D DNFV4_02456 General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D DNFV4_02448 Type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D DNFV4_02957 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D DNFV4_02958 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D DNFV4_02446 hypothetical protein K02458 gspI; general secretion pathway protein I
D DNFV4_02445 Type II secretion system protein J (modular protein) K02459 gspJ; general secretion pathway protein J
D DNFV4_02441 putative general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D DNFV4_02442 hypothetical protein K02462 gspM; general secretion pathway protein M
D DNFV4_02450 Type II secretion system ATPase E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DNFV4_03334 Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D DNFV4_03333 Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D DNFV4_01647 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DNFV4_01379 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D DNFV4_01679 Sec translocon subunit SecY K03076 secY; preprotein translocase subunit SecY
D DNFV4_03335 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D DNFV4_00565 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNFV4_01062 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNFV4_00926 protein translocation ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DNFV4_04077 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D DNFV4_03170 signal recognition particle protein component K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DNFV4_03322 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_04066 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_04067 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_04219 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_01959 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D DNFV4_03393 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:nti02020]
D DNFV4_01136 Phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DNFV4_01230 Response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DNFV4_01249 putative Response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DNFV4_02476 Response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DNFV4_01345 putative Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D DNFV4_01523 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_02464 Protein SphX K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_02469 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_04050 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_00483 putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_00956 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_03394 putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_03812 multidrug efflux pump membrane fusion protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system
D DNFV4_03811 multidrug efflux pump RND permease subunit MdtB K07788 mdtB; multidrug efflux pump
D DNFV4_03810 multidrug efflux pump RND permease subunit MdtC K07789 mdtC; multidrug efflux pump
D DNFV4_00293 putative Co/Zn/Cd efflux system membrane fusion protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D DNFV4_00294 copper/silver export system RND permease K07787 cusA; copper/silver efflux system protein
D DNFV4_03410 Flagellin K02406 fliC; flagellin
D DNFV4_03432 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D DNFV4_03403 Motility protein A K02556 motA; chemotaxis protein MotA
D DNFV4_04525 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D DNFV4_04524 DNA-binding transcriptional activator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DNFV4_04528 K(+) transporting P-type ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D DNFV4_04527 K(+) transporting P-type ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D DNFV4_04526 K(+) transporting P-type ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D DNFV4_03261 Response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D DNFV4_00001 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DNFV4_04424 putative Histidine kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D DNFV4_02481 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D DNFV4_00533 putative Nitrite oxidoreductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_00537 Putative Nitrite oxidoreductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_03896 putative Nitrite oxidoreductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_00532 putative Nitrite oxidoreductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_00536 putative Nitrite oxidoreductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_03895 putative Nitrite oxidoreductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_03420 Translational regulator CsrA (modular protein) K03563 csrA; carbon storage regulator
D DNFV4_01386 Response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
D DNFV4_04229 Nitrate/nitrite sensor protein K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D DNFV4_04417 HATPase_c domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D DNFV4_04418 DNA-binding transcriptional activator DevR/DosR K07695 devR; two-component system, NarL family, response regulator DevR
D DNFV4_01444 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D DNFV4_01445 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DNFV4_01446 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D DNFV4_01447 Type II/IV secretion system protein TadC, associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D DNFV4_01708 [Protein-PII]-UMP uridylyl-removing enzyme / [Protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D DNFV4_00285 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DNFV4_01709 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DNFV4_01537 Histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DNFV4_01538 Nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DNFV4_03468 PAS domain-containing protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DNFV4_04422 Sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D DNFV4_01610 Regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DNFV4_01944 Regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DNFV4_03397 Sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DNFV4_03467 Regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DNFV4_04425 Transcriptional regulatory protein ZraR K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_01046 Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNFV4_01233 Histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNFV4_01047 Regulatory protein AtoC K02667 pilR; two-component system, NtrC family, response regulator PilR
D DNFV4_01692 RNA polymerase, sigma-54 (Sigma N) factor K03092 rpoN; RNA polymerase sigma-54 factor
D DNFV4_03620 Fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D DNFV4_03621 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D DNFV4_02434 putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D DNFV4_02436 DNA-binding transcriptional activator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D DNFV4_01997 [NiFe] hydrogenase small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D DNFV4_01998 [NiFe] hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D DNFV4_01995 Hydrogenase transcriptional regulatory protein HoxA K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D DNFV4_03455 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DNFV4_03454 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DNFV4_02878 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_02881 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_02882 CheW-like domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_03453 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_02880 Histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNFV4_03452 Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNFV4_00891 putative Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_01182 putative Response regulator, CheY-like (Modular protein) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03234 putative Response regulator, CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03372 Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03447 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03451 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03472 Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03457 protein-glutamate methylesterase/protein glutamine deamidase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DNFV4_02879 putative Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D DNFV4_02877 putative Chemotaxis regulator CheY K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D DNFV4_02069 putative Regulatory protein Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_02073 putative Regulatory protein Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_02140 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_03839 Transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_01161 putative Quinol-cytochrome c reductase, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DNFV4_01923 putative cytochrome c oxidase, fused subunits I, II, and III (modular protein) K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D DNFV4_01467 Cytochrome bd oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DNFV4_03268 Cytochrome bd quinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DNFV4_01163 hypothetical protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DNFV4_03343 hypothetical protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DNFV4_01468 Cytochrome bd oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DNFV4_03269 Cytochrome bd oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DNFV4_01963 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D DNFV4_03278 putative Outer membrane efflux protein K12340 tolC; outer membrane protein
D DNFV4_02681 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D DNFV4_03018 Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D DNFV4_03019 Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D DNFV4_02987 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D DNFV4_00696 putative FecR, ferric citrate sensor K07165 fecR; transmembrane sensor
D DNFV4_00701 putative Anti-FecI sigma factor, FecR K07165 fecR; transmembrane sensor
D DNFV4_00706 Iron dicitrate transporter FecR K07165 fecR; transmembrane sensor
D DNFV4_00709 FecR, iron siderophore sensor protein K07165 fecR; transmembrane sensor
D DNFV4_00713 Inner membrane sensor protein K07165 fecR; transmembrane sensor
D DNFV4_00721 Iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor
D DNFV4_00730 putative Iron dicitrate transmembrane sensor FecR K07165 fecR; transmembrane sensor
D DNFV4_03424 Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:nti02024]
D DNFV4_02366 Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DNFV4_02367 aminodeoxychorismate synthase subunit 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DNFV4_03058 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DNFV4_02634 Phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D DNFV4_02434 putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D DNFV4_02436 DNA-binding transcriptional activator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D DNFV4_04524 DNA-binding transcriptional activator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DNFV4_02142 putative Leu/Ile/Val-binding protein, periplasmic-binding component of ABC transport system K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DNFV4_03381 Twin-arginine translocation signal domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DNFV4_00353 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DNFV4_02069 putative Regulatory protein Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_02073 putative Regulatory protein Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_02140 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_03839 Transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_02792 Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DNFV4_02507 RND efflux system, outer membrane factor lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D DNFV4_00196 Transporter K18139 oprM; outer membrane protein, multidrug efflux system
D DNFV4_00565 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNFV4_01062 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNFV4_01647 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DNFV4_01379 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D DNFV4_01679 Sec translocon subunit SecY K03076 secY; preprotein translocase subunit SecY
D DNFV4_03335 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D DNFV4_00926 protein translocation ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DNFV4_04077 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D DNFV4_03170 signal recognition particle protein component K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DNFV4_01386 Response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
D DNFV4_00865 Neutral metalloproteinase (modular protein) K08777 nprB; neutral peptidase B [EC:3.4.24.-]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:nti02030]
D DNFV4_03454 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DNFV4_02880 Histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNFV4_03452 Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNFV4_02878 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_02881 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_02882 CheW-like domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_03453 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_00891 putative Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_01182 putative Response regulator, CheY-like (Modular protein) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03234 putative Response regulator, CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03372 Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03447 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03451 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03472 Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03448 Chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D DNFV4_03457 protein-glutamate methylesterase/protein glutamine deamidase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DNFV4_03456 putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D DNFV4_03455 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DNFV4_03462 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DNFV4_03442 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DNFV4_03441 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DNFV4_03403 Motility protein A K02556 motA; chemotaxis protein MotA
D DNFV4_03402 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:nti02040]
D DNFV4_03464 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D DNFV4_03463 Flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D DNFV4_03462 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DNFV4_03460 flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DNFV4_03443 Flagellar biosynthesis protein fliL K02415 fliL; flagellar protein FliL
D DNFV4_03442 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DNFV4_03441 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DNFV4_03440 Flagellar biosynthesis protein fliO K02418 fliO; flagellar protein FliO/FliZ
D DNFV4_03439 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DNFV4_03438 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DNFV4_03437 Flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DNFV4_03435 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DNFV4_03436 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DNFV4_03429 Flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D DNFV4_03466 Flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DNFV4_03465 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DNFV4_03445 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D DNFV4_03444 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D DNFV4_03431 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D DNFV4_03430 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D DNFV4_03428 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D DNFV4_03426 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D DNFV4_03422 Flagellar hook-associated protein flgK K02396 flgK; flagellar hook-associated protein 1
D DNFV4_03421 Flagellar hook-associated protein flgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D DNFV4_03410 Flagellin K02406 fliC; flagellin
D DNFV4_03408 Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D DNFV4_03407 Flagellar secretion chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D DNFV4_03403 Motility protein A K02556 motA; chemotaxis protein MotA
D DNFV4_03402 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D DNFV4_03424 Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D DNFV4_03423 putative FlgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D DNFV4_00659 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D DNFV4_01285 RNA polymerase, sigma 70 (sigma D) factor K03086 rpoD; RNA polymerase primary sigma factor
D DNFV4_01599 RNA polymerase sigma factor RpoS K03086 rpoD; RNA polymerase primary sigma factor
D DNFV4_01692 RNA polymerase, sigma-54 (Sigma N) factor K03092 rpoN; RNA polymerase sigma-54 factor
D DNFV4_03432 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D DNFV4_03029 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:nti04980]
D DNFV4_02875 Corrinoid adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DNFV4_00336 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D DNFV4_02307 cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:nti01501]
D DNFV4_02351 muropeptide:H(+) symporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D DNFV4_00416 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DNFV4_00736 putative Multidrug efflux transporter, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_02509 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00048 RND efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00151 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00194 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00737 putative Multidrug efflux transporter K18138 acrB; multidrug efflux pump
D DNFV4_00049 multidrug efflux pump RND permease AcrB K18138 acrB; multidrug efflux pump
D DNFV4_00152 Multidrug efflux system protein K18138 acrB; multidrug efflux pump
D DNFV4_00195 multidrug efflux pump RND permease AcrB K18138 acrB; multidrug efflux pump
D DNFV4_02507 RND efflux system, outer membrane factor lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D DNFV4_00196 Transporter K18139 oprM; outer membrane protein, multidrug efflux system
D DNFV4_01963 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D DNFV4_03278 putative Outer membrane efflux protein K12340 tolC; outer membrane protein
D DNFV4_03717 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DNFV4_03957 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DNFV4_01312 Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DNFV4_01024 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:nti01502]
D DNFV4_00744 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_01033 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_04224 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_02650 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DNFV4_01026 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DNFV4_01027 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DNFV4_01030 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:nti01503]
D DNFV4_03823 exported protein of unknown function K06079 cutF; copper homeostasis protein (lipoprotein)
D DNFV4_03072 MurNAc-LAA domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DNFV4_00483 putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_00956 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_03394 putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_00954 Thioredoxin domain-containing protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D DNFV4_00736 putative Multidrug efflux transporter, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_02509 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00048 RND efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00151 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00194 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00737 putative Multidrug efflux transporter K18138 acrB; multidrug efflux pump
D DNFV4_00049 multidrug efflux pump RND permease AcrB K18138 acrB; multidrug efflux pump
D DNFV4_00152 Multidrug efflux system protein K18138 acrB; multidrug efflux pump
D DNFV4_00195 multidrug efflux pump RND permease AcrB K18138 acrB; multidrug efflux pump
D DNFV4_01963 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D DNFV4_03278 putative Outer membrane efflux protein K12340 tolC; outer membrane protein
D DNFV4_03140 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:nti01000]
C 01001 Protein kinases [BR:nti01001]
D DNFV4_01893 Non-specific serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D DNFV4_02682 Polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D DNFV4_03016 putative Lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D DNFV4_01136 Phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DNFV4_04525 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D DNFV4_04229 Nitrate/nitrite sensor protein K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D DNFV4_04417 HATPase_c domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D DNFV4_04424 putative Histidine kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D DNFV4_00285 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DNFV4_01537 Histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DNFV4_03468 PAS domain-containing protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DNFV4_01046 Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNFV4_01233 Histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNFV4_02434 putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D DNFV4_03711 GHKL domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DNFV4_02880 Histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNFV4_03452 Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:nti01009]
D DNFV4_01124 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DNFV4_01892 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D DNFV4_01947 PPM-type phosphatase domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:nti01002]
D DNFV4_01355 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D DNFV4_04093 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DNFV4_04282 Hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D DNFV4_01770 GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DNFV4_00421 Gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D DNFV4_01744 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DNFV4_03552 glutamate synthase subunit GltB K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D DNFV4_03036 L-glutamine--D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DNFV4_02228 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_02695 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_02967 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_02988 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_03089 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_03094 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_03607 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_03612 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_04436 Asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DNFV4_02327 Class GN sortase K07284 srtA; sortase A [EC:3.4.22.70]
D DNFV4_02453 JDVT-CTERM system CAAX-type protease K07052 K07052; CAAX protease family protein
D DNFV4_00553 Aminopeptidase K13722 trf2_3; tricorn protease interacting factor F2/3 [EC:3.4.11.-]
D DNFV4_03303 Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D DNFV4_00865 Neutral metalloproteinase (modular protein) K08777 nprB; neutral peptidase B [EC:3.4.24.-]
D DNFV4_03878 Insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D DNFV4_03879 Insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D DNFV4_04538 Insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D DNFV4_00415 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DNFV4_01681 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DNFV4_00424 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP-specific) K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D DNFV4_02863 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D DNFV4_01333 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D DNFV4_02675 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DNFV4_03043 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DNFV4_01585 Protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D DNFV4_03824 Protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D DNFV4_01832 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D DNFV4_03827 FHA domain-containing protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D DNFV4_00519 Beta-peptidyl aminopeptidase BapA K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D DNFV4_00483 putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_00956 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_03394 putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_01241 putative periplasmic serine endoprotease DegP-like protein K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D DNFV4_02924 HtrA protease/chaperone protein K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D DNFV4_03718 putative periplasmic serine endoprotease DegP-like protein K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D DNFV4_03822 Thermophilic serine proteinase K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D DNFV4_00652 putative Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DNFV4_00430 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DNFV4_02341 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DNFV4_03146 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DNFV4_01992 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D DNFV4_02933 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DNFV4_03160 Carboxy-terminal-processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DNFV4_00645 Signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D DNFV4_02941 Signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D DNFV4_03909 Rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D DNFV4_01215 hypothetical protein K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D DNFV4_03152 Proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D DNFV4_01214 Proteasome subunit alpha K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D DNFV4_03153 Proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D DNFV4_00444 peptidase component of the HslVU protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D DNFV4_04591 putative Isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DNFV4_01837 TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex (PMID) K03592 pmbA; PmbA protein
D DNFV4_01836 metalloprotease subunit TldD K03568 tldD; TldD protein
D DNFV4_03863 Protein HflC K04087 hflC; modulator of FtsH protease HflC
D DNFV4_03862 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:nti01003]
D DNFV4_00919 putative Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D DNFV4_03022 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D DNFV4_04589 Biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DNFV4_03717 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DNFV4_03957 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DNFV4_02702 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DNFV4_03605 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DNFV4_00216 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D DNFV4_01203 Glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
D DNFV4_04247 Glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:nti01005]
D DNFV4_03140 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DNFV4_03137 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DNFV4_00240 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DNFV4_02888 UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DNFV4_03139 UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DNFV4_03133 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DNFV4_03134 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DNFV4_02137 putative enzyme K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D DNFV4_02233 Acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D DNFV4_02929 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DNFV4_02931 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DNFV4_03084 2-keto-3-deoxy-D-glycero-D-galacto-9-phosphonononic acid phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DNFV4_02928 D-arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DNFV4_02932 D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D DNFV4_04582 ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D DNFV4_03131 Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D DNFV4_03132 Lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DNFV4_03338 hypothetical protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D DNFV4_02009 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DNFV4_04577 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DNFV4_00244 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DNFV4_02702 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D DNFV4_03605 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:nti01011]
D DNFV4_01274 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DNFV4_01032 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DNFV4_01031 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DNFV4_01028 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DNFV4_01025 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DNFV4_00744 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_01033 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_04224 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DNFV4_02650 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DNFV4_01027 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DNFV4_01030 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DNFV4_01356 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DNFV4_03053 acidPPc domain-containing protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DNFV4_04595 putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D DNFV4_03717 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DNFV4_03957 Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DNFV4_01312 Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DNFV4_01024 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DNFV4_00652 putative Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DNFV4_04589 Biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DNFV4_02327 Class GN sortase K07284 srtA; sortase A [EC:3.4.22.70]
D DNFV4_03876 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DNFV4_03627 putative enzyme K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D DNFV4_02188 Endolytic murein transglycosylase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D DNFV4_01631 putative endolytic peptidoglycan transglycosylase RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DNFV4_02359 putative endolytic peptidoglycan transglycosylase RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DNFV4_01304 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D DNFV4_03072 MurNAc-LAA domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DNFV4_02915 hypothetical protein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:nti01004]
D DNFV4_01074 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DNFV4_01072 3-oxoacyl-[acyl carrier protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DNFV4_01133 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DNFV4_01077 3-oxoacyl-[acyl carrier protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNFV4_02890 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNFV4_03399 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DNFV4_01075 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_02844 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_03701 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DNFV4_03141 3-hydroxy-acyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DNFV4_00501 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DNFV4_00548 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DNFV4_01529 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D DNFV4_02804 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_04312 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DNFV4_00353 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DNFV4_01071 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DNFV4_02926 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DNFV4_00643 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:nti01006]
D DNFV4_00977 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DNFV4_03555 Octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DNFV4_01835 ditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific] K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DNFV4_01587 Phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
D DNFV4_01883 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D DNFV4_03478 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DNFV4_01168 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:nti01007]
D DNFV4_03948 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DNFV4_03945 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DNFV4_02721 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DNFV4_03492 Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DNFV4_04096 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DNFV4_03337 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DNFV4_03041 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DNFV4_01354 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DNFV4_02201 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DNFV4_04492 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DNFV4_02377 lysine--tRNA ligase/Ap4A synthetase/Ap3A synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DNFV4_01772 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DNFV4_01021 Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DNFV4_04657 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DNFV4_02788 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DNFV4_02789 Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DNFV4_02565 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DNFV4_01831 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DNFV4_00619 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DNFV4_02186 alanine--tRNA ligase/DNA-binding transcriptional repressor K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DNFV4_00614 Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DNFV4_00615 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DNFV4_02917 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DNFV4_04107 glutamate--pyruvate aminotransferase AlaC K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D DNFV4_00803 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DNFV4_01881 Aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D DNFV4_00638 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DNFV4_03629 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DNFV4_04178 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DNFV4_00777 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DNFV4_02935 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DNFV4_04550 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DNFV4_04124 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DNFV4_01378 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_03001 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_03886 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DNFV4_01006 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D DNFV4_01484 (S)-ureidoglycine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D DNFV4_02701 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:nti00194]
D DNFV4_01718 Ubiquinol--cytochrome c reductase, cytochrome B subunit K02635 petB; cytochrome b6
D DNFV4_01901 hypothetical protein K02638 petE; plastocyanin
D DNFV4_04379 Cytochrome c domain-containing protein K08906 petJ; cytochrome c6
D DNFV4_00578 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DNFV4_00577 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DNFV4_00576 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DNFV4_00575 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DNFV4_00574 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DNFV4_03881 ATP synthase F0, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DNFV4_03882 ATP synthase F0, subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DNFV4_03883 ATP synthase F0, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DNFV4_03884 putative ATP synthase F0, subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:nti03000]
D DNFV4_00170 Transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D DNFV4_01418 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D DNFV4_03857 Mercuric resistance operon regulatory protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D DNFV4_02177 HTH merR-type domain-containing protein K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D DNFV4_00373 Cobalamin B12-binding domain-containing protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D DNFV4_01331 Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DNFV4_03069 Ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DNFV4_03972 Ferric uptake regulation protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D DNFV4_02069 putative Regulatory protein Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_02073 putative Regulatory protein Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_02140 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_03839 Transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DNFV4_02780 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D DNFV4_03385 Winged helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D DNFV4_02199 Biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D DNFV4_04654 DNA-binding protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D DNFV4_00129 Transcriptional regulator K07726 K07726; putative transcriptional regulator
D DNFV4_00966 putative nickel-responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D DNFV4_02846 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DNFV4_01195 Ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D DNFV4_00570 putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DNFV4_00225 Chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DNFV4_01516 Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D DNFV4_00117 Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D DNFV4_02946 Pyrimidine operon regulatory protein / Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DNFV4_03294 hypothetical protein K07735 algH; putative transcriptional regulator
D DNFV4_00164 hypothetical protein K07735 algH; putative transcriptional regulator
D DNFV4_00438 putative RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DNFV4_01601 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D DNFV4_00302 NrdR transcriptional repressor K07738 nrdR; transcriptional repressor NrdR
D DNFV4_01364 Transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:nti03021]
D DNFV4_01687 RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DNFV4_01652 RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DNFV4_01653 RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DNFV4_02498 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DNFV4_00659 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D DNFV4_01285 RNA polymerase, sigma 70 (sigma D) factor K03086 rpoD; RNA polymerase primary sigma factor
D DNFV4_01599 RNA polymerase sigma factor RpoS K03086 rpoD; RNA polymerase primary sigma factor
D DNFV4_00959 Sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DNFV4_01460 Sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DNFV4_01500 putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DNFV4_03537 RNA polymerase sigma factor SigZ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DNFV4_03815 Sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DNFV4_04503 putative RNA polymerase sigma-E factor (Sigma-24) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DNFV4_00168 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DNFV4_01729 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D DNFV4_01692 RNA polymerase, sigma-54 (Sigma N) factor K03092 rpoN; RNA polymerase sigma-54 factor
D DNFV4_03432 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D DNFV4_02086 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D DNFV4_04122 Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D DNFV4_01734 Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D DNFV4_01648 transcription termination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DNFV4_01577 Response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DNFV4_00175 Response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D DNFV4_00438 putative RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DNFV4_01601 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D DNFV4_02938 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D DNFV4_01270 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:nti03019]
D DNFV4_01314 RNase G K08301 rng; ribonuclease G [EC:3.1.26.-]
D DNFV4_01078 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DNFV4_03873 Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DNFV4_04543 putative Ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D DNFV4_03560 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DNFV4_03029 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DNFV4_04116 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DNFV4_01270 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DNFV4_02196 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNFV4_03955 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNFV4_01727 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DNFV4_00986 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DNFV4_03420 Translational regulator CsrA (modular protein) K03563 csrA; carbon storage regulator
D DNFV4_01694 Nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
D DNFV4_03640 ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:nti03011]
D DNFV4_00644 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DNFV4_02654 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DNFV4_01665 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DNFV4_01686 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DNFV4_01676 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DNFV4_01066 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DNFV4_01655 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DNFV4_01673 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DNFV4_02657 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DNFV4_01658 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DNFV4_01685 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DNFV4_01654 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DNFV4_01684 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DNFV4_01672 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D DNFV4_04117 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DNFV4_03169 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DNFV4_01668 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DNFV4_01068 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DNFV4_01663 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DNFV4_04489 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DNFV4_04154 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DNFV4_01650 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DNFV4_01662 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DNFV4_01659 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DNFV4_01660 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DNFV4_01671 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DNFV4_01674 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DNFV4_00305 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DNFV4_01651 50S ribosomal protein L7/L12 / 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DNFV4_01649 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DNFV4_02658 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DNFV4_01669 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DNFV4_01678 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DNFV4_01666 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DNFV4_01688 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DNFV4_01675 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DNFV4_03166 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DNFV4_00616 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DNFV4_01377 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DNFV4_01664 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DNFV4_01661 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DNFV4_01670 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DNFV4_01376 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DNFV4_02868 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DNFV4_01667 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DNFV4_01677 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DNFV4_01271 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DNFV4_01070 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DNFV4_01645 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DNFV4_00562 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DNFV4_00617 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DNFV4_01683 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DNFV4_01050 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:nti03009]
D DNFV4_01078 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DNFV4_03027 GTPase Era K03595 era; GTPase
D DNFV4_01375 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D DNFV4_00438 putative RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DNFV4_01601 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D DNFV4_02086 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D DNFV4_04122 Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D DNFV4_01734 Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D DNFV4_01648 transcription termination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DNFV4_00836 Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D DNFV4_00612 Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DNFV4_02919 16S rRNA (Guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D DNFV4_02194 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D DNFV4_00568 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DNFV4_01022 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D DNFV4_02665 putative 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DNFV4_03869 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D DNFV4_04095 putative TrmH family tRNA/rRNA methyltransferase YacO K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D DNFV4_04047 LSU methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D DNFV4_03877 putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D DNFV4_01540 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D DNFV4_01771 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D DNFV4_00592 putative RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DNFV4_01788 23S rRNA pseudouridine(2457) synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D DNFV4_03917 Dual-specificity RNA pseudouridine synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D DNFV4_00900 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D DNFV4_01957 Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D DNFV4_03168 Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D DNFV4_00461 Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D DNFV4_00859 YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D DNFV4_01506 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D DNFV4_01314 RNase G K08301 rng; ribonuclease G [EC:3.1.26.-]
D DNFV4_02187 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D DNFV4_04495 GTPase Der K03977 engA; GTPase
D DNFV4_02494 GTP-binding protein HflX K03665 hflX; GTPase
D DNFV4_02914 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DNFV4_03308 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DNFV4_04119 30S ribosome binding factor K02834 rbfA; ribosome-binding factor A
D DNFV4_04123 Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D DNFV4_01372 Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D DNFV4_04078 Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D DNFV4_01693 Ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D DNFV4_01052 redox-responsive ATPase YchF K06942 ychF; ribosome-binding ATPase
D DNFV4_01069 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:nti03016]
D DNFV4_03280 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D DNFV4_04543 putative Ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D DNFV4_01474 A-adding tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D DNFV4_02865 RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D DNFV4_02866 Archease domain-containing protein K24956 ZBTB8OS; protein archease
D DNFV4_03948 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DNFV4_01831 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DNFV4_01354 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DNFV4_04492 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DNFV4_03041 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DNFV4_03945 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DNFV4_03337 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DNFV4_02377 lysine--tRNA ligase/Ap4A synthetase/Ap3A synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DNFV4_01772 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DNFV4_02186 alanine--tRNA ligase/DNA-binding transcriptional repressor K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DNFV4_01021 Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DNFV4_00619 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DNFV4_02565 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DNFV4_04096 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DNFV4_02201 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DNFV4_04657 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DNFV4_00614 Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DNFV4_00615 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DNFV4_02721 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DNFV4_03492 Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DNFV4_04593 D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D DNFV4_01283 Histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DNFV4_00662 tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D DNFV4_03073 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D DNFV4_04118 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D DNFV4_00824 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D DNFV4_03951 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DNFV4_02914 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DNFV4_03478 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DNFV4_00566 5-carboxymethylaminomethyluridine-tRNA synthase GTPase subunit K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D DNFV4_00567 5-carboxymethylaminomethyluridine-tRNA synthase subunit MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DNFV4_00563 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D DNFV4_02311 truncated RNase PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D DNFV4_02483 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D DNFV4_03180 RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D DNFV4_04639 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D DNFV4_02788 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DNFV4_02789 Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DNFV4_04307 YbaK/EbsC family protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D DNFV4_04382 YbaK/EbsC family protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D DNFV4_02223 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D DNFV4_02348 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D DNFV4_02349 MiaB family protein, possibly involved in tRNA or rRNA modification K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D DNFV4_00442 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D DNFV4_03167 tRNA m(1)G37 methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D DNFV4_01969 tRNA (cytidine/uridine-2'-O)-ribose methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D DNFV4_02505 SpoU_sub_bind domain-containing protein K03437 spoU; RNA methyltransferase, TrmH family
D DNFV4_00573 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DNFV4_03592 tRNA-5-methyluridine(54) 2-sulfurtransferase K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D DNFV4_03637 tRNA cytosine(32) 2-sulfurtransferase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D DNFV4_03953 iron-sulfur cluster insertion protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D DNFV4_01305 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D DNFV4_01602 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D DNFV4_03675 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DNFV4_03967 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DNFV4_00414 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D DNFV4_01097 NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DNFV4_01394 Epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DNFV4_03336 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DNFV4_01399 putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D DNFV4_02673 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D DNFV4_01956 putative Inactive of metal-dependent proteases, molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D DNFV4_02493 tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D DNFV4_04110 ATPase YjeE, predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D DNFV4_04116 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:nti03012]
D DNFV4_04121 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DNFV4_00618 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DNFV4_03670 putative ABC-type transport system, ATPase component K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D DNFV4_02653 Elongation factor Ts K02357 tsf; elongation factor Ts
D DNFV4_01643 fragment of translation elongation factor Tu 2 (part 1) K02358 tuf; elongation factor Tu
D DNFV4_01657 fragment of translation elongation factor Tu 2 (part 2) K02358 tuf; elongation factor Tu
D DNFV4_01656 elongation factor G K02355 fusA; elongation factor G
D DNFV4_02923 Elongation factor G K02355 fusA; elongation factor G
D DNFV4_01272 peptide chain release factor RF1 K02835 prfA; peptide chain release factor 1
D DNFV4_02651 ribosome-recycling factor K02838 frr; ribosome recycling factor
D DNFV4_01273 Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D DNFV4_01051 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D DNFV4_01682 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D DNFV4_02839 Elongation factor P K02356 efp; elongation factor P
D DNFV4_02378 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D DNFV4_00500 peptidyl-tRNA hydrolase, ribosome rescue factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:nti03110]
D DNFV4_02429 chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D DNFV4_02492 chaperone protein ClpB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D DNFV4_00429 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D DNFV4_04001 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D DNFV4_00445 ATPase component of the HslVU protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D DNFV4_02196 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNFV4_03955 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNFV4_01727 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DNFV4_02195 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DNFV4_03597 Curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D DNFV4_03954 Chaperone protein HscB K04082 hscB; molecular chaperone HscB
D DNFV4_02197 Protein GrpE K03687 GRPE; molecular chaperone GrpE
D DNFV4_01010 SHSP domain-containing protein K13993 HSP20; HSP20 family protein
D DNFV4_01243 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D DNFV4_02244 Heat shock protein, Hsp20 family K13993 HSP20; HSP20 family protein
D DNFV4_02488 Heat shock protein, Hsp20 family K13993 HSP20; HSP20 family protein
D DNFV4_04290 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D DNFV4_04344 Heat shock protein, Hsp20 family K13993 HSP20; HSP20 family protein
D DNFV4_01728 10 kDa chaperonin K04078 groES; chaperonin GroES
D DNFV4_00483 putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_00956 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_03394 putative periplasmic serine endoprotease DegP-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DNFV4_02675 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DNFV4_03043 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DNFV4_03883 ATP synthase F0, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DNFV4_03599 exported protein of unknown function K06006 cpxP; periplasmic protein CpxP/Spy
D DNFV4_03816 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D DNFV4_02013 Hydrogenase maturation factor HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D DNFV4_00241 Hydrogenase maturation factor HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D DNFV4_02014 Hydrogenase nickel incorporation protein K04652 hypB; hydrogenase nickel incorporation protein HypB
D DNFV4_03822 Thermophilic serine proteinase K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D DNFV4_01079 putative peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D DNFV4_01961 putative peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D DNFV4_02860 Peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D DNFV4_00516 Peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D DNFV4_02648 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D DNFV4_03271 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D DNFV4_03763 Peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D DNFV4_04586 PpiC domain-containing protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D DNFV4_01941 Thioredoxin C-1 K03671 TXN; thioredoxin
D DNFV4_02133 hypothetical protein K03671 TXN; thioredoxin
D DNFV4_02573 Thioredoxin K03671 TXN; thioredoxin
D DNFV4_03838 hypothetical protein K03671 TXN; thioredoxin
D DNFV4_03961 Thioredoxin family protein K03671 TXN; thioredoxin
D DNFV4_00013 Thioredoxin 1 K03671 TXN; thioredoxin
D DNFV4_03708 Glutaredoxin K07390 grxD; monothiol glutaredoxin
D DNFV4_00954 Thioredoxin domain-containing protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D DNFV4_02060 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
C 04131 Membrane trafficking [BR:nti04131]
D DNFV4_03240 putative Phospholipase D K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D DNFV4_02716 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DNFV4_01382 glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DNFV4_00780 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DNFV4_04315 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DNFV4_04542 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DNFV4_02518 Ysc84 domain-containing protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
C 04121 Ubiquitin system [BR:nti04121]
D DNFV4_03310 Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:nti03051]
D DNFV4_01215 hypothetical protein K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D DNFV4_03152 Proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D DNFV4_01214 Proteasome subunit alpha K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D DNFV4_03153 Proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D DNFV4_01211 Bacterial proteasome-activating AAA-ATPase (PAN) K13527 mpa; proteasome-associated ATPase
D DNFV4_03155 Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
D DNFV4_03151 Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D DNFV4_01212 Pup deamidase/depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
D DNFV4_01216 putative Pup--protein ligase K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
D DNFV4_03154 Depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:nti03032]
D DNFV4_00365 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DNFV4_00368 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DNFV4_00621 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D DNFV4_03976 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DNFV4_04101 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D DNFV4_00646 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D DNFV4_00001 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DNFV4_03623 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DNFV4_01284 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DNFV4_04326 putative DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D DNFV4_01067 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02106 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02114 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02116 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02901 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNFV4_03553 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNFV4_02021 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNFV4_00002 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNFV4_04490 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DNFV4_03040 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DNFV4_00435 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNFV4_03165 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DNFV4_01288 Ribonuclease K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D DNFV4_04149 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNFV4_02362 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DNFV4_00004 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DNFV4_00003 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DNFV4_02401 Type 2 DNA topoisomerase 6 subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2]
D DNFV4_02400 DNA topoisomerase VI subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2]
D DNFV4_01316 DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:nti03036]
D DNFV4_02226 Class I SAM-dependent methyltransferase K11434 PRMT1; type I protein arginine methyltransferase [EC:2.1.1.319]
D DNFV4_01078 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DNFV4_00621 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D DNFV4_03976 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DNFV4_04101 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D DNFV4_00646 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D DNFV4_03597 Curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D DNFV4_00001 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DNFV4_01140 Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D DNFV4_01766 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D DNFV4_01767 Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D DNFV4_01035 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DNFV4_03028 hypothetical protein K05589 ftsB; cell division protein FtsB
D DNFV4_03163 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DNFV4_01024 Cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DNFV4_00837 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DNFV4_01023 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D DNFV4_01034 putative FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D DNFV4_01029 essential cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DNFV4_03162 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DNFV4_01036 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DNFV4_03874 putative Cell division protein ZapA K09888 zapA; cell division protein ZapA
D DNFV4_03072 MurNAc-LAA domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DNFV4_00736 putative Multidrug efflux transporter, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_02509 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00048 RND efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00151 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00194 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_01041 Cell division initiation protein DivIVA K04074 divIVA; cell division initiation protein
D DNFV4_01309 dynamic cytoskeletal protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DNFV4_01310 Cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D DNFV4_01313 Peptidoglycan glycosyltransferase MrdB K05837 rodA; rod shape determining protein RodA
D DNFV4_00569 Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D DNFV4_00570 putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DNFV4_00225 Chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DNFV4_00567 5-carboxymethylaminomethyluridine-tRNA synthase subunit MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DNFV4_00568 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DNFV4_00442 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D DNFV4_00443 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D DNFV4_03489 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D DNFV4_00630 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DNFV4_02847 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DNFV4_03391 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DNFV4_03987 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D DNFV4_04469 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D DNFV4_04588 putative GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:nti03400]
D DNFV4_04594 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D DNFV4_00171 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D DNFV4_00384 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D DNFV4_00968 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D DNFV4_02344 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DNFV4_01818 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DNFV4_02495 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DNFV4_04153 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DNFV4_02345 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DNFV4_00507 G:T/U mismatch-specific uracil/thymine DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D DNFV4_00765 Type-5 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DNFV4_00170 Transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D DNFV4_03762 3-methyl-adenine DNA glycosylase I, constitutive K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DNFV4_01109 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DNFV4_03819 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DNFV4_04602 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DNFV4_03756 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D DNFV4_03309 Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DNFV4_02362 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DNFV4_04149 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DNFV4_00878 excision nuclease subunit A K03701 uvrA; excinuclease ABC subunit A
D DNFV4_03293 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D DNFV4_03177 excision nuclease subunit B K03702 uvrB; excinuclease ABC subunit B
D DNFV4_00897 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D DNFV4_01638 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DNFV4_01652 RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DNFV4_01653 RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DNFV4_01687 RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DNFV4_02498 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DNFV4_04585 Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DNFV4_04112 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DNFV4_01384 Endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D DNFV4_03479 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D DNFV4_03871 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DNFV4_03870 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DNFV4_02901 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNFV4_03553 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DNFV4_02021 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNFV4_00002 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DNFV4_04490 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DNFV4_03040 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DNFV4_00435 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNFV4_01067 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02106 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02114 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02116 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02050 putative ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DNFV4_02184 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D DNFV4_00634 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DNFV4_00636 Holliday junction branch migration complex subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DNFV4_00409 putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DNFV4_01954 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D DNFV4_01756 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DNFV4_03025 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DNFV4_00437 DNA repair protein RecR K06187 recR; recombination protein RecR
D DNFV4_01942 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D DNFV4_00479 CRISPR-associated endonuclease Cas1 1 K15342 cas1; CRISP-associated protein Cas1
D DNFV4_01547 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D DNFV4_01867 CRISPR-associated exonuclease Cas4/endonuclease Cas1 fusion K15342 cas1; CRISP-associated protein Cas1
D DNFV4_03252 Non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku
D DNFV4_03251 3'-phosphoesterase / DNA ligase D / DNA repair polymerase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D DNFV4_00004 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DNFV4_00003 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DNFV4_01316 DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DNFV4_00621 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D DNFV4_03976 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DNFV4_04101 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D DNFV4_00646 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D DNFV4_03554 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D DNFV4_03937 DNA polymerase IV K04479 dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]
D DNFV4_01992 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D DNFV4_02185 Regulatory protein RecX K03565 recX; regulatory protein
D DNFV4_01396 DNA polymerase/3'-5' exonuclease PolX K02347 polX; DNA polymerase (family X)
D DNFV4_01487 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D DNFV4_01887 Vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DNFV4_02032 Vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DNFV4_02353 Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:nti03029]
D DNFV4_01161 putative Quinol-cytochrome c reductase, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DNFV4_04121 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DNFV4_00618 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DNFV4_02653 Elongation factor Ts K02357 tsf; elongation factor Ts
D DNFV4_01643 fragment of translation elongation factor Tu 2 (part 1) K02358 tuf; elongation factor Tu
D DNFV4_01657 fragment of translation elongation factor Tu 2 (part 2) K02358 tuf; elongation factor Tu
D DNFV4_01656 elongation factor G K02355 fusA; elongation factor G
D DNFV4_02923 Elongation factor G K02355 fusA; elongation factor G
D DNFV4_03027 GTPase Era K03595 era; GTPase
D DNFV4_02721 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DNFV4_04492 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DNFV4_01772 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DNFV4_03337 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DNFV4_03033 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DNFV4_03030 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DNFV4_03035 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DNFV4_04011 hypothetical protein K01173 ENDOG; endonuclease G, mitochondrial
D DNFV4_01067 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02106 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02114 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_02116 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D DNFV4_03144 putative Outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family
D DNFV4_02196 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNFV4_03955 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNFV4_02197 Protein GrpE K03687 GRPE; molecular chaperone GrpE
D DNFV4_01727 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DNFV4_01728 10 kDa chaperonin K04078 groES; chaperonin GroES
D DNFV4_02195 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DNFV4_03951 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DNFV4_03954 Chaperone protein HscB K04082 hscB; molecular chaperone HscB
D DNFV4_03708 Glutaredoxin K07390 grxD; monothiol glutaredoxin
D DNFV4_00630 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DNFV4_02847 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DNFV4_03391 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DNFV4_00565 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNFV4_01062 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:nti02000]
D DNFV4_03136 ATP-dependent lipid A-core flippase K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DNFV4_03893 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DNFV4_01845 Toxin RTX-I translocation ATP-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D DNFV4_00037 membrane protein of unknown function K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D DNFV4_02207 putative ATP-dependent lipid A-core flippase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DNFV4_03915 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DNFV4_04509 putative ABC-type transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DNFV4_00787 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D DNFV4_02786 Sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DNFV4_02785 sulfate/thiosulfate ABC transporter inner membrane subunit CysU K02046 cysU; sulfate/thiosulfate transport system permease protein
D DNFV4_02784 sulfate/thiosulfate ABC transporter inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DNFV4_02783 Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DNFV4_01975 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) K02020 modA; molybdate transport system substrate-binding protein
D DNFV4_01978 Molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DNFV4_01985 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) K02020 modA; molybdate transport system substrate-binding protein
D DNFV4_01981 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D DNFV4_01982 Molybdate/tungstate import ATP-binding protein WtpC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DNFV4_01710 putative nitrate ABC transporter, nitrate binding protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D DNFV4_01711 Nitrate ABC transporter, integral membrane subunit (Modular protein) K15577 nrtB; nitrate/nitrite transport system permease protein
D DNFV4_01712 ABC transporter, ATP-binding protein NrtD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D DNFV4_01330 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D DNFV4_01329 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D DNFV4_01328 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DNFV4_02258 ABC transporter, periplasmic spermidine putrescine-binding protein potD (TC_3.A.1.11.1) K11069 potD; spermidine/putrescine transport system substrate-binding protein
D DNFV4_02256 spermidine preferential ABC transporter membrane subunit PotB K11071 potB; spermidine/putrescine transport system permease protein
D DNFV4_02255 putrescine ABC transporter ATP binding subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D DNFV4_02257 putrescine ABC transporter membrane subunit PotI K11074 potI; putrescine transport system permease protein
D DNFV4_03596 sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DNFV4_03593 Trehalose/maltose-binding protein MalE K10236 thuE; trehalose/maltose transport system substrate-binding protein
D DNFV4_03594 Trehalose/maltose transport system permease protein MalF K10237 thuF; trehalose/maltose transport system permease protein
D DNFV4_03595 Trehalose/maltose transport system permease protein MalG K10238 thuG; trehalose/maltose transport system permease protein
D DNFV4_01145 Outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DNFV4_04395 MlaD domain-containing protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DNFV4_01143 intermembrane phospholipid transport system, integral membrane subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DNFV4_04397 STAS domain-containing protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DNFV4_01144 intermembrane phospholipid transport system, ATP binding subunit MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DNFV4_04396 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DNFV4_04394 ABC_trans_aux domain-containing protein K18480 linN; cholesterol transport system auxiliary component
D DNFV4_01146 putative ABC transporter, auxiliary component, ATP-dependent toluene efflux transporter K07323 mlaC; phospholipid transport system substrate-binding protein
D DNFV4_04449 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DNFV4_04483 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DNFV4_01523 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_02464 Protein SphX K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_02469 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_04050 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D DNFV4_02465 Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D DNFV4_02466 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D DNFV4_02467 phosphate ABC transporter ATP binding subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DNFV4_02776 PBPb domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D DNFV4_02142 putative Leu/Ile/Val-binding protein, periplasmic-binding component of ABC transport system K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DNFV4_03381 Twin-arginine translocation signal domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DNFV4_04464 Hemin import ATP-binding protein HmuV K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D DNFV4_04465 Hemin transport system permease protein HmuU K25133 hmuU; heme transport system permease protein
D DNFV4_01884 Cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DNFV4_02870 Cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DNFV4_02871 Iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D DNFV4_01786 Molybdenum ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DNFV4_02872 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DNFV4_04466 Cobalamin-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D DNFV4_00597 Manganese transport system membrane protein MntC K19976 mntB; manganese transport system permease protein
D DNFV4_00598 Manganese transport system ATP-binding protein MntB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D DNFV4_00599 hypothetical protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D DNFV4_03013 Transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DNFV4_03100 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D DNFV4_03610 Transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DNFV4_00581 ABC transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DNFV4_03012 ABC transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DNFV4_03609 ABC transporter domain-containing protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DNFV4_02892 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D DNFV4_02891 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D DNFV4_01691 lipopolysaccharide transport system ATP binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DNFV4_03099 ABC transporter domain-containing protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D DNFV4_01628 hypothetical protein K25151 gldF; gliding motility-associated transport system permease protein
D DNFV4_01629 ABC-type transport system, ATPase component K25152 gldA; gliding motility-associated transport system ATP-binding protein
D DNFV4_01627 hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D DNFV4_04401 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D DNFV4_04402 HlyD family secretion protein K25183 ybhG; membrane fusion protein YbhG
D DNFV4_02376 Lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D DNFV4_02375 lipoprotein release complex - ATP binding subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DNFV4_03162 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D DNFV4_03163 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D DNFV4_00817 Transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DNFV4_03386 Transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DNFV4_04399 Transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DNFV4_00112 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D DNFV4_00816 Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DNFV4_03387 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DNFV4_03617 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DNFV4_00111 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DNFV4_00550 FtsX domain-containing protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DNFV4_01361 fragment of ABC-type tripartite efflux pump ATP binding/membrane subunit (part 2) K02004 ABC.CD.P; putative ABC transport system permease protein
D DNFV4_01369 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DNFV4_04443 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DNFV4_00549 putative ABC transporter ATP-binding protein YbbA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DNFV4_01360 fragment of ABC-type tripartite efflux pump ATP binding/membrane subunit (part 1) K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DNFV4_01366 Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DNFV4_02210 putative Multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump
D DNFV4_02861 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter
D DNFV4_01730 Nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DNFV4_02351 muropeptide:H(+) symporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D DNFV4_01236 putative Multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D DNFV4_01410 Glycerol uptake facilitator protein K06188 aqpZ; aquaporin Z
D DNFV4_04223 Potassium channel protein K10716 kch; voltage-gated potassium channel
D DNFV4_04364 Potassium channel protein K10716 kch; voltage-gated potassium channel
D DNFV4_01706 ammonia/ammonium transporter K03320 amt; ammonium transporter, Amt family
D DNFV4_01714 ammonia/ammonium transporter K03320 amt; ammonium transporter, Amt family
D DNFV4_01716 Ammonium transporter Amt K03320 amt; ammonium transporter, Amt family
D DNFV4_02328 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D DNFV4_01235 putative Nitrite transporter NirC K21993 fdhC; formate transporter
D DNFV4_00512 large conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D DNFV4_02580 Mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel
D DNFV4_01928 putative Small-conductance mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D DNFV4_04226 putative Small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D DNFV4_02515 putative MscS Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein
D DNFV4_03026 Magnesium transporter MgtE K06213 mgtE; magnesium transporter
D DNFV4_04339 Magnesium transporter K06213 mgtE; magnesium transporter
D DNFV4_03403 Motility protein A K02556 motA; chemotaxis protein MotA
D DNFV4_03402 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D DNFV4_01327 Biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D DNFV4_01326 Biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D DNFV4_03486 MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D DNFV4_03485 Biopolymer transport protein ExbD K03560 tolR; biopolymer transport protein TolR
D DNFV4_00605 Cobalt/magnesium transport protein CorA K03284 corA; magnesium transporter
D DNFV4_02174 Mercury resistance system transport protein MerF K19058 merC; mercuric ion transport protein
D DNFV4_02361 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DNFV4_01441 putative lipoprotein YiaD K03286 TC.OOP; OmpA-OmpF porin, OOP family
D DNFV4_00886 hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D DNFV4_01323 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D DNFV4_02873 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D DNFV4_04463 Outer membrane vitamin B12 receptor BtuB K16092 btuB; vitamin B12 transporter
D DNFV4_02707 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D DNFV4_00699 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00702 Ligand-gated channel K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00707 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00710 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00714 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00722 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00731 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00844 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00851 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00856 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00863 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00939 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_00949 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DNFV4_02259 Heavy metal RND efflux outer membrane protein, CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system
D DNFV4_04203 Heavy metal RND efflux outer membrane protein, CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system
D DNFV4_00289 Heavy metal RND efflux outer membrane protein, CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system
D DNFV4_01963 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D DNFV4_03278 putative Outer membrane efflux protein K12340 tolC; outer membrane protein
D DNFV4_01989 Efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system
D DNFV4_02507 RND efflux system, outer membrane factor lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D DNFV4_00196 Transporter K18139 oprM; outer membrane protein, multidrug efflux system
D DNFV4_02681 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D DNFV4_03018 Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D DNFV4_03019 Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D DNFV4_03144 putative Outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family
D DNFV4_01132 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D DNFV4_01690 OstA-like_N domain-containing protein K09774 lptA; lipopolysaccharide export system protein LptA
D DNFV4_01689 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D DNFV4_01939 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D DNFV4_03047 Cobalt-zinc-cadmium resistance protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D DNFV4_03061 ZIP zinc transporter K16267 zipB; zinc and cadmium transporter
D DNFV4_00727 putative Divalent metal cation permease, ZupT-like K07238 TC.ZIP; zinc transporter, ZIP family
D DNFV4_02261 Efflux RND transporter permease subunit K15726 czcA; heavy metal efflux system protein
D DNFV4_04197 Cation efflux system protein CzcA K15726 czcA; heavy metal efflux system protein
D DNFV4_04201 Cation efflux system protein CzcA K15726 czcA; heavy metal efflux system protein
D DNFV4_00287 Protein HelA K15726 czcA; heavy metal efflux system protein
D DNFV4_00294 copper/silver export system RND permease K07787 cusA; copper/silver efflux system protein
D DNFV4_00737 putative Multidrug efflux transporter K18138 acrB; multidrug efflux pump
D DNFV4_00049 multidrug efflux pump RND permease AcrB K18138 acrB; multidrug efflux pump
D DNFV4_00152 Multidrug efflux system protein K18138 acrB; multidrug efflux pump
D DNFV4_00195 multidrug efflux pump RND permease AcrB K18138 acrB; multidrug efflux pump
D DNFV4_03811 multidrug efflux pump RND permease subunit MdtB K07788 mdtB; multidrug efflux pump
D DNFV4_03810 multidrug efflux pump RND permease subunit MdtC K07789 mdtC; multidrug efflux pump
D DNFV4_00399 guanidinium exporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D DNFV4_01495 putative transporter YnfA K09771 TC.SMR3; small multidrug resistance family-3 protein
D DNFV4_00833 Sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D DNFV4_04243 Sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D DNFV4_01930 Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D DNFV4_04391 K(+)/H(+) antiporter NhaP2 K11105 cvrA; potassium/hydrogen antiporter
D DNFV4_02511 Glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D DNFV4_04158 Sodium:proton exchanger K26735 KEA4_5_6; K+:H+ antiporter
D DNFV4_01252 Chromate ion family chromate transporter K07240 chrA; chromate transporter
D DNFV4_03383 Arsenical-resistance protein Acr3 K03325 ACR3; arsenite transporter
D DNFV4_04595 putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D DNFV4_01121 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D DNFV4_01029 essential cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DNFV4_02528 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D DNFV4_00697 TonB_C domain-containing protein K03832 tonB; periplasmic protein TonB
D DNFV4_01325 putative TonB protein K03832 tonB; periplasmic protein TonB
D DNFV4_02479 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor K03640 pal; peptidoglycan-associated lipoprotein
D DNFV4_03482 Peptidoglycan-associated protein K03640 pal; peptidoglycan-associated lipoprotein
D DNFV4_03661 Peptidoglycan-associated protein K03640 pal; peptidoglycan-associated lipoprotein
D DNFV4_04341 Peptidoglycan-associated protein K03640 pal; peptidoglycan-associated lipoprotein
D DNFV4_03483 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins K03641 tolB; TolB protein
D DNFV4_03311 K(+)-insensitive pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D DNFV4_01130 Cytochrome c-type biogenesis protein CcdA (DsbD analog) K06196 ccdA; cytochrome c-type biogenesis protein
D DNFV4_00533 putative Nitrite oxidoreductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_00537 Putative Nitrite oxidoreductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_03896 putative Nitrite oxidoreductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_00532 putative Nitrite oxidoreductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_00536 putative Nitrite oxidoreductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_03895 putative Nitrite oxidoreductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DNFV4_01238 putative Fatty acid resistance protein FarA K03543 emrA; membrane fusion protein, multidrug efflux system
D DNFV4_02260 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family K15727 czcB; membrane fusion protein, heavy metal efflux system
D DNFV4_04196 Efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D DNFV4_04202 Efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D DNFV4_00288 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family K15727 czcB; membrane fusion protein, heavy metal efflux system
D DNFV4_00293 putative Co/Zn/Cd efflux system membrane fusion protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D DNFV4_01846 putative Leukotoxin secretion protein D K11003 hlyD; membrane fusion protein, hemolysin D
D DNFV4_00035 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D DNFV4_00736 putative Multidrug efflux transporter, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_02509 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00048 RND efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00151 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00194 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_03812 multidrug efflux pump membrane fusion protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system
D DNFV4_02682 Polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D DNFV4_03016 putative Lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D DNFV4_00203 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D DNFV4_04406 hypothetical protein K07245 pcoD; copper resistance protein D
C 02044 Secretion system [BR:nti02044]
D DNFV4_01845 Toxin RTX-I translocation ATP-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D DNFV4_00037 membrane protein of unknown function K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D DNFV4_01846 putative Leukotoxin secretion protein D K11003 hlyD; membrane fusion protein, hemolysin D
D DNFV4_00035 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D DNFV4_01963 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D DNFV4_03278 putative Outer membrane efflux protein K12340 tolC; outer membrane protein
D DNFV4_02456 General secretion pathway protein C K02452 gspC; general secretion pathway protein C
D DNFV4_02455 putative general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D DNFV4_02959 TPR_REGION domain-containing protein K02453 gspD; general secretion pathway protein D
D DNFV4_02450 Type II secretion system ATPase E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DNFV4_02448 Type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D DNFV4_02957 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D DNFV4_02958 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D DNFV4_02446 hypothetical protein K02458 gspI; general secretion pathway protein I
D DNFV4_02445 Type II secretion system protein J (modular protein) K02459 gspJ; general secretion pathway protein J
D DNFV4_02441 putative general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D DNFV4_02442 hypothetical protein K02462 gspM; general secretion pathway protein M
D DNFV4_04093 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DNFV4_03620 Fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D DNFV4_03621 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D DNFV4_02954 Pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D DNFV4_01045 Type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D DNFV4_02449 Type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D DNFV4_02955 Type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D DNFV4_02879 putative Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D DNFV4_01695 Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D DNFV4_02443 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D DNFV4_02953 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D DNFV4_01696 putative Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D DNFV4_02952 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D DNFV4_01697 Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D DNFV4_01698 hypothetical protein K02665 pilP; type IV pilus assembly protein PilP
D DNFV4_01699 Type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D DNFV4_03373 Type IV pilus retractation ATPase PilT K02669 pilT; twitching motility protein PilT
D DNFV4_03630 Type II/IV secretion system family protein K02669 pilT; twitching motility protein PilT
D DNFV4_03631 Type IV pilus ATPase PilU K02670 pilU; twitching motility protein PilU
D DNFV4_04086 putative Type IV pilus assembly protein PilV K02671 pilV; type IV pilus assembly protein PilV
D DNFV4_04085 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D DNFV4_00427 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D DNFV4_00428 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D DNFV4_04087 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D DNFV4_04092 Flagellar hook-associated protein flgK K08084 fimT; type IV fimbrial biogenesis protein FimT
D DNFV4_01444 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D DNFV4_01445 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DNFV4_01446 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D DNFV4_01447 Type II/IV secretion system protein TadC, associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D DNFV4_01040 hypothetical protein K02221 yggT; YggT family protein
D DNFV4_02678 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D DNFV4_03435 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DNFV4_03436 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DNFV4_03463 Flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D DNFV4_03460 flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DNFV4_03441 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DNFV4_03440 Flagellar biosynthesis protein fliO K02418 fliO; flagellar protein FliO/FliZ
D DNFV4_03439 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DNFV4_03438 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DNFV4_03437 Flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DNFV4_02079 IncF plasmid conjugative transfer pilus assembly protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D DNFV4_02065 putative Protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU
D DNFV4_02063 Signal peptidase I K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D DNFV4_02062 putative TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D DNFV4_02061 hypothetical protein K12064 traV; conjugal transfer pilus assembly protein TraV
D DNFV4_02059 IncF plasmid conjugative transfer pilus assembly protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D DNFV4_02057 hypothetical protein K12067 traE; conjugal transfer pilus assembly protein TraE
D DNFV4_02056 hypothetical protein K12068 traL; conjugal transfer pilus assembly protein TraL
D DNFV4_02037 TRAG family protein K12071 traD; conjugal transfer pilus assembly protein TraD
D DNFV4_02060 Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D DNFV4_02080 putative traH family protein K12072 traH; conjugative transfer pilus assembly protein TraH
D DNFV4_00926 protein translocation ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DNFV4_03334 Protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D DNFV4_01647 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D DNFV4_03333 Protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D DNFV4_01379 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D DNFV4_01679 Sec translocon subunit SecY K03076 secY; preprotein translocase subunit SecY
D DNFV4_03170 signal recognition particle protein component K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DNFV4_04077 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D DNFV4_03335 Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D DNFV4_00565 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNFV4_01062 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DNFV4_03322 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_04066 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_04067 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_04219 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D DNFV4_01959 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D DNFV4_03393 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:nti02042]
D DNFV4_02361 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:nti02022]
D DNFV4_01136 Phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DNFV4_01230 Response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DNFV4_01249 putative Response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DNFV4_02476 Response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DNFV4_04525 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D DNFV4_04524 DNA-binding transcriptional activator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DNFV4_03261 Response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D DNFV4_01137 DNA-binding transcriptional dual regulator PhoB K02483 K02483; two-component system, OmpR family, response regulator
D DNFV4_04076 putative Response regulator, CheY-like K02483 K02483; two-component system, OmpR family, response regulator
D DNFV4_01386 Response regulator transcription factor K07692 degU; two-component system, NarL family, response regulator DegU
D DNFV4_04229 Nitrate/nitrite sensor protein K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D DNFV4_04417 HATPase_c domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D DNFV4_04418 DNA-binding transcriptional activator DevR/DosR K07695 devR; two-component system, NarL family, response regulator DevR
D DNFV4_04424 putative Histidine kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D DNFV4_00285 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DNFV4_01537 Histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DNFV4_01538 Nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DNFV4_03468 PAS domain-containing protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D DNFV4_04422 Sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D DNFV4_01610 Regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DNFV4_01944 Regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DNFV4_03397 Sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DNFV4_03467 Regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DNFV4_04425 Transcriptional regulatory protein ZraR K07714 atoC; two-component system, NtrC family, response regulator AtoC
D DNFV4_01046 Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNFV4_01233 Histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNFV4_01047 Regulatory protein AtoC K02667 pilR; two-component system, NtrC family, response regulator PilR
D DNFV4_02434 putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D DNFV4_02436 DNA-binding transcriptional activator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D DNFV4_01995 Hydrogenase transcriptional regulatory protein HoxA K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D DNFV4_03711 GHKL domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DNFV4_01393 Regulatory protein AtoC K02481 flgR; two-component system, NtrC family, response regulator
D DNFV4_02704 Regulatory protein AtoC K02481 flgR; two-component system, NtrC family, response regulator
D DNFV4_02767 Regulatory protein AtoC K02481 flgR; two-component system, NtrC family, response regulator
D DNFV4_02880 Histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNFV4_03452 Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNFV4_00891 putative Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_01182 putative Response regulator, CheY-like (Modular protein) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03234 putative Response regulator, CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03372 Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03447 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03451 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03472 Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03457 protein-glutamate methylesterase/protein glutamine deamidase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DNFV4_02877 putative Chemotaxis regulator CheY K11523 pixH; two-component system, chemotaxis family, response regulator PixH
C 02035 Bacterial motility proteins [BR:nti02035]
D DNFV4_02880 Histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNFV4_03452 Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DNFV4_02878 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_02881 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_02882 CheW-like domain-containing protein K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_03453 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D DNFV4_03456 putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D DNFV4_03455 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DNFV4_03457 protein-glutamate methylesterase/protein glutamine deamidase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DNFV4_00891 putative Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_01182 putative Response regulator, CheY-like (Modular protein) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03234 putative Response regulator, CheY-like K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03372 Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03447 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03451 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03472 Response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DNFV4_03448 Chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D DNFV4_03454 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D DNFV4_03460 flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DNFV4_03440 Flagellar biosynthesis protein fliO K02418 fliO; flagellar protein FliO/FliZ
D DNFV4_03439 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DNFV4_03438 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DNFV4_03437 Flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DNFV4_03435 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DNFV4_03436 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DNFV4_03462 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DNFV4_03442 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DNFV4_03441 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DNFV4_03463 Flagellar M-ring protein fliF K02409 fliF; flagellar M-ring protein FliF
D DNFV4_03426 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D DNFV4_03429 Flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D DNFV4_03428 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D DNFV4_03443 Flagellar biosynthesis protein fliL K02415 fliL; flagellar protein FliL
D DNFV4_03464 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D DNFV4_03466 Flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DNFV4_03465 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DNFV4_03445 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D DNFV4_03431 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D DNFV4_03430 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D DNFV4_03444 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D DNFV4_03422 Flagellar hook-associated protein flgK K02396 flgK; flagellar hook-associated protein 1
D DNFV4_03421 Flagellar hook-associated protein flgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D DNFV4_03423 putative FlgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D DNFV4_03410 Flagellin K02406 fliC; flagellin
D DNFV4_03408 Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D DNFV4_03407 Flagellar secretion chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D DNFV4_03432 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D DNFV4_03403 Motility protein A K02556 motA; chemotaxis protein MotA
D DNFV4_03402 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D DNFV4_03419 Flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D DNFV4_03424 Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D DNFV4_03409 hypothetical protein K06603 flaG; flagellar protein FlaG
D DNFV4_03434 Flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D DNFV4_01897 hypothetical protein K04562 flhG; flagellar biosynthesis protein FlhG
D DNFV4_03433 Antiactivator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D DNFV4_02879 putative Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D DNFV4_01047 Regulatory protein AtoC K02667 pilR; two-component system, NtrC family, response regulator PilR
D DNFV4_01046 Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNFV4_01233 Histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D DNFV4_03373 Type IV pilus retractation ATPase PilT K02669 pilT; twitching motility protein PilT
D DNFV4_03630 Type II/IV secretion system family protein K02669 pilT; twitching motility protein PilT
D DNFV4_03631 Type IV pilus ATPase PilU K02670 pilU; twitching motility protein PilU
D DNFV4_02877 putative Chemotaxis regulator CheY K11523 pixH; two-component system, chemotaxis family, response regulator PixH
D DNFV4_03620 Fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D DNFV4_03621 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D DNFV4_02954 Pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D DNFV4_01045 Type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D DNFV4_02449 Type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D DNFV4_02955 Type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D DNFV4_04093 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DNFV4_01699 Type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D DNFV4_01698 hypothetical protein K02665 pilP; type IV pilus assembly protein PilP
D DNFV4_01697 Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D DNFV4_01696 putative Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D DNFV4_02952 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D DNFV4_01695 Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D DNFV4_02443 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D DNFV4_02953 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D DNFV4_00427 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D DNFV4_00428 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D DNFV4_04086 putative Type IV pilus assembly protein PilV K02671 pilV; type IV pilus assembly protein PilV
D DNFV4_04085 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D DNFV4_01444 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D DNFV4_01445 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:nti04812]
D DNFV4_02859 AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein
D DNFV4_01309 dynamic cytoskeletal protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DNFV4_02098 ALP_N domain-containing protein K18640 parM; plasmid segregation protein ParM
D DNFV4_01036 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DNFV4_01035 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DNFV4_00569 Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D DNFV4_00570 putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DNFV4_00225 Chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:nti04147]
D DNFV4_03029 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DNFV4_01382 glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DNFV4_01381 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DNFV4_04315 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DNFV4_04542 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DNFV4_00728 hypothetical protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D DNFV4_01727 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DNFV4_02196 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNFV4_03955 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DNFV4_02541 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DNFV4_01417 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DNFV4_01420 Gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DNFV4_01769 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DNFV4_01643 fragment of translation elongation factor Tu 2 (part 1) K02358 tuf; elongation factor Tu
D DNFV4_01657 fragment of translation elongation factor Tu 2 (part 2) K02358 tuf; elongation factor Tu
D DNFV4_01283 Histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DNFV4_00353 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DNFV4_00344 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_00354 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DNFV4_01124 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DNFV4_01680 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DNFV4_01600 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DNFV4_00774 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DNFV4_00775 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DNFV4_03079 fructose-1,6-bisphosphatase 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DNFV4_03542 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DNFV4_04206 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DNFV4_01709 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DNFV4_02671 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DNFV4_00234 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D DNFV4_03625 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DNFV4_02912 bifunctional AICAR transformylase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DNFV4_02719 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_04269 lipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DNFV4_00656 Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D DNFV4_01905 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNFV4_02574 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNFV4_03784 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DNFV4_01380 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DNFV4_00780 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DNFV4_02526 Outer membrane lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:nti02048]
D DNFV4_00479 CRISPR-associated endonuclease Cas1 1 K15342 cas1; CRISP-associated protein Cas1
D DNFV4_01547 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D DNFV4_01867 CRISPR-associated exonuclease Cas4/endonuclease Cas1 fusion K15342 cas1; CRISP-associated protein Cas1
D DNFV4_00478 CRISPR-associated endoribonuclease Cas2 1 K09951 cas2; CRISPR-associated protein Cas2
D DNFV4_00481 CRISPR-associated endoribonuclease Cas2 2 K09951 cas2; CRISPR-associated protein Cas2
D DNFV4_01868 CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D DNFV4_01554 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D DNFV4_01859 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D DNFV4_01556 Type I-B CRISPR-associated protein Cas7/Cst2/DevR K19075 cst2; CRISPR-associated protein Cst2
D DNFV4_01544 CRISPR-associated exonuclease Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D DNFV4_01555 CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t
D DNFV4_01861 Type I-U CRISPR-associated protein Cas7 K19131 csb1; CRISPR-associated protein Csb1
D DNFV4_01862 CRISPR-associated protein Csb2 K19132 csb2; CRISPR-associated protein Csb2
D DNFV4_01860 Type I-U CRISPR-associated protein Cas8c K19135 csx14; CRISPR-associated protein Csx14
D DNFV4_00466 CRISPR-associated protein Cas10/Cmr2, subtype III-B K19076 cmr2; CRISPR-associated protein Cmr2
D DNFV4_01570 putative Type III-B CRISPR-associated protein Cas10/Cmr2 K19076 cmr2; CRISPR-associated protein Cmr2
D DNFV4_00467 CRISPR-associated protein (Cas_Cmr3) K09127 cmr3; CRISPR-associated protein Cmr3
D DNFV4_01569 hypothetical protein K09127 cmr3; CRISPR-associated protein Cmr3
D DNFV4_00470 CRISPR type III-B/RAMP module RAMP protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4
D DNFV4_01568 Type III-B CRISPR module RAMP protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4
D DNFV4_00471 CRISPR type III-B/RAMP module-associated protein Cmr5 K19141 cmr5; CRISPR-associated protein Cmr5
D DNFV4_01567 CRISPR type III-B/RAMP module-associated protein Cmr5 K19141 cmr5; CRISPR-associated protein Cmr5
D DNFV4_01178 Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D DNFV4_01172 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D DNFV4_02737 putative Type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D DNFV4_03312 putative type III restriction-modification system, Res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D DNFV4_00210 Type III site-specific deoxyribonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D DNFV4_03315 Site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D DNFV4_00212 Type III restriction-modification system methylation subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D DNFV4_01086 putative endoribonuclease MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D DNFV4_02217 endoribonuclease toxin MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D DNFV4_02218 Programmed cell death antitoxin MazE K07172 mazE; antitoxin MazE
D DNFV4_03926 Programmed cell death antitoxin MazE K07172 mazE; antitoxin MazE
D DNFV4_01194 Type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D DNFV4_01559 Toxin RelG K06218 relE; mRNA interferase RelE/StbE
D DNFV4_01865 Plasmid stabilization protein K06218 relE; mRNA interferase RelE/StbE
D DNFV4_02594 Type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D DNFV4_03285 Type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D DNFV4_03544 Type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D DNFV4_03781 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D DNFV4_00367 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D DNFV4_01195 Ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D DNFV4_01742 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D DNFV4_02280 Endoribonuclease HigB K07334 higB-1; toxin HigB-1
D DNFV4_04654 DNA-binding protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D DNFV4_00840 HigA protein (antitoxin to HigB) K21498 higA-1; antitoxin HigA-1
D DNFV4_01193 HigA protein (antitoxin to HigB) K21498 higA-1; antitoxin HigA-1
D DNFV4_02281 HigA protein (antitoxin to HigB) K21498 higA-1; antitoxin HigA-1
D DNFV4_02620 DNA-binding protein K21495 fitA; antitoxin FitA
D DNFV4_02800 hypothetical protein K21495 fitA; antitoxin FitA
D DNFV4_04515 Arc family DNA-binding protein K21495 fitA; antitoxin FitA
D DNFV4_01036 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DNFV4_01309 dynamic cytoskeletal protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D DNFV4_03948 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DNFV4_03951 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:nti01504]
D DNFV4_00736 putative Multidrug efflux transporter, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_02509 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00048 RND efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00151 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00194 Efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D DNFV4_00737 putative Multidrug efflux transporter K18138 acrB; multidrug efflux pump
D DNFV4_00049 multidrug efflux pump RND permease AcrB K18138 acrB; multidrug efflux pump
D DNFV4_00152 Multidrug efflux system protein K18138 acrB; multidrug efflux pump
D DNFV4_00195 multidrug efflux pump RND permease AcrB K18138 acrB; multidrug efflux pump
D DNFV4_02507 RND efflux system, outer membrane factor lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D DNFV4_00196 Transporter K18139 oprM; outer membrane protein, multidrug efflux system
D DNFV4_01963 putative outer membrane protein TolC K12340 tolC; outer membrane protein
D DNFV4_03278 putative Outer membrane efflux protein K12340 tolC; outer membrane protein
D DNFV4_01989 Efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D DNFV4_00976 putative dihydroflavonol 4-reductase K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219]
D DNFV4_00236 NAD-dependent epimerase/dehydratase family protein K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219]
D DNFV4_00834 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D DNFV4_00352 Iron-containing redox enzyme family protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D DNFV4_00052 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D DNFV4_01056 hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D DNFV4_00505 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DNFV4_03639 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DNFV4_02339 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D DNFV4_00587 glutathionyl-hydroquinone reductase YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D DNFV4_03683 Ferredoxin-thioredoxin reductase subunit B K17892 FTRC; ferredoxin-thioredoxin reductase catalytic chain [EC:1.8.7.2]
D DNFV4_01952 putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DNFV4_01518 Thiol peroxidase, Tpx-type K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DNFV4_00380 Redoxin domain-containing protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DNFV4_02333 Alkyl hydroperoxide reductase subunit C-like protein K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DNFV4_00041 osmotically inducible peroxiredoxin OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D DNFV4_00012 Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D DNFV4_00014 Pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D DNFV4_00992 Chlorite dismutase K09162 cld; chlorite dismutase [EC:1.13.11.49]
D DNFV4_00723 putative L-lysine N(6)-monooxygenase (NADPH) K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
D DNFV4_02490 Pyr_redox_2 domain-containing protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D DNFV4_02484 Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D DNFV4_03382 Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D DNFV4_00274 Hydrogenase 4 subunit B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D DNFV4_00272 Hydrogenase K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D DNFV4_00270 Hydrogenase-4 component F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D DNFV4_00271 hydrogenase 4 component F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D DNFV4_04049 putative fatty acid methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D DNFV4_01219 Hopanoid C-3 methylase K22704 hpnR; hopanoid C-3 methylase [EC:2.1.1.-]
D DNFV4_03647 Hopanoid C-3 methylase K22704 hpnR; hopanoid C-3 methylase [EC:2.1.1.-]
D DNFV4_03790 Hopanoid C-2 methylase K22705 hpnP; hopanoid C-2 methylase [EC:2.1.1.-]
D DNFV4_02991 putative enzyme K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D DNFV4_00029 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D DNFV4_00198 Arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D DNFV4_02379 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D DNFV4_00541 putative Protein-glutamine gamma-glutamyltransferase K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D DNFV4_04210 Glycosyl transferase family 2 K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268]
D DNFV4_04246 Glycosyltransferase K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268]
D DNFV4_03923 Deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D DNFV4_00830 Pyridinium-3,5-biscarboxylic acid mononucleotide synthase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D DNFV4_02413 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D DNFV4_02982 hypothetical protein K20084 gnnB; UDP-N-acetyl-3-dehydro-alpha-D-glucosamine 3-aminotranferase [EC:2.6.1.122]
D DNFV4_03830 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D DNFV4_01726 putative [Glutamine synthetase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D DNFV4_04644 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D DNFV4_00762 putative Phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D DNFV4_04573 4-hydroxybenzoyl-CoA thioesterase family active site K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DNFV4_01895 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D DNFV4_02458 putative enzyme K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D DNFV4_01943 putative Response regulator with HD domain protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D DNFV4_02309 Response regulator with HD-GYP domain protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D DNFV4_03418 hypothetical protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D DNFV4_03070 putative metal-dependent hydrolase YabD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DNFV4_04195 TNase-like domain-containing protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D DNFV4_04013 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DNFV4_02263 Peptide deformylase 2 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DNFV4_00543 AAA domain-containing protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D DNFV4_02976 Low molecular weight protein-tyrosine-phosphatase Wzb (Modular protein) K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D DNFV4_03636 LMWPc domain-containing protein K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D DNFV4_02937 putative S-adenosyl-L-methionine hydrolase (adenosine-forming) K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D DNFV4_04109 ADP-dependent (S)-NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D DNFV4_03880 ATP-dependent sacrificial sulfur transferase LarE K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D DNFV4_00832 putative nickel insertion protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D DNFV4_02760 Peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D DNFV4_00340 fragment of methylmalonyl-CoA mutase (part 2) K25821 icmB; isobutyryl-CoA mutase small subunit [EC:5.4.99.13]
D DNFV4_01817 RNA 3'-terminal phosphate cyclase K18105 rtcA; RNA 3'-terminal phosphate cyclase (GTP) [EC:6.5.1.5]
D DNFV4_04242 Calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D DNFV4_01911 putative cation-transporting ATPase F K12953 ctpF; cation-transporting P-type ATPase F [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D DNFV4_03952 scaffold protein for iron-sulfur cluster assembly K04488 iscU; nitrogen fixation protein NifU and related proteins
D DNFV4_00255 scaffold protein for iron-sulfur cluster assembly K04488 iscU; nitrogen fixation protein NifU and related proteins
D DNFV4_03689 Protein NorQ K04748 norQ; nitric oxide reductase NorQ protein
D DNFV4_03328 NapG-like ferredoxin K02573 napG; ferredoxin-type protein NapG
D DNFV4_00053 electron transfer flavoprotein (beta subunit) K03521 fixA; electron transfer flavoprotein beta subunit
D DNFV4_04241 putative Dodecin K09165 K09165; dodecin
C 99983 Lipid metabolism
D DNFV4_01790 Sterol desaturase family protein K22618 olsE; ornithine lipid hydroxylase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D DNFV4_01038 Pyridoxal phosphate homeostasis protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D DNFV4_04111 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D DNFV4_03389 Molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D DNFV4_02156 DoxX family protein K15977 K15977; putative oxidoreductase
D DNFV4_03840 hypothetical protein K15977 K15977; putative oxidoreductase
D DNFV4_00023 DoxX family protein K15977 K15977; putative oxidoreductase
D DNFV4_00123 Membrane protein 2, distant similarity to thiosulfate:quinone oxidoreductase DoxD K15977 K15977; putative oxidoreductase
D DNFV4_04643 Esterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D DNFV4_02893 transcription antiterminator and regulator of RNA stability K03704 cspA; cold shock protein
D DNFV4_01707 nitrogen regulatory protein PII-1 K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
D DNFV4_00520 Metallo-beta-lactamase family protein, RNA-specific K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D DNFV4_02288 Adaptor protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D DNFV4_00431 Trigger factor K03545 tig; trigger factor
D DNFV4_00007 SsrA-binding protein K03664 smpB; SsrA-binding protein
D DNFV4_02008 Hydrogenase maturation factor HypC K04653 hypC; hydrogenase expression/formation protein HypC
D DNFV4_00245 hydrogenase maturation factor HybG K04653 hypC; hydrogenase expression/formation protein HypC
D DNFV4_02010 Fe-(CN)2CO cofactor assembly scaffold protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D DNFV4_00243 Fe-(CN)2CO cofactor assembly scaffold protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D DNFV4_02011 hydrogenase maturation protein, carbamoyl dehydratase K04655 hypE; hydrogenase expression/formation protein HypE
D DNFV4_00242 hydrogenase maturation protein, carbamoyl dehydratase K04655 hypE; hydrogenase expression/formation protein HypE
D DNFV4_02007 Carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D DNFV4_00246 Carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D DNFV4_02426 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein K07391 comM; magnesium chelatase family protein
D DNFV4_00582 Peptidase K07395 K07395; putative proteasome-type protease
D DNFV4_01126 Cytochrome c-type biogenesis protein Ccs1/ResB K07399 resB; cytochrome c biogenesis protein
D DNFV4_00661 putative membrane-bound ClpP-class protease associated with aq_911 K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D DNFV4_02107 putative Ribonuclease H K06993 K06993; ribonuclease H-related protein
D DNFV4_00670 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D DNFV4_02922 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D DNFV4_02130 DNA repair protein RadC (Modular protein) K03630 radC; DNA repair protein RadC
D DNFV4_00795 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D DNFV4_03164 YraN family protein K07460 yraN; putative endonuclease
D DNFV4_01315 DNA protecting protein DprA K04096 smf; DNA processing protein
D DNFV4_03672 Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D DNFV4_02346 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease
D DNFV4_01088 fragment of CP4-44 prophage; IS5 transposase and trans-activator (part 1) K07481 K07481; transposase, IS5 family
D DNFV4_02036 CP4-44 prophage; IS5 transposase and trans-activator K07481 K07481; transposase, IS5 family
D DNFV4_02590 transposase K07483 K07483; transposase
D DNFV4_01549 transposase K07483 K07483; transposase
D DNFV4_02220 transposase K07483 K07483; transposase
D DNFV4_02728 transposase K07483 K07483; transposase
D DNFV4_03982 transposase K07483 K07483; transposase
D DNFV4_01073 transposase K07486 K07486; transposase
D DNFV4_01855 transposase K07486 K07486; transposase
D DNFV4_02360 transposase K07486 K07486; transposase
D DNFV4_02432 transposase K07486 K07486; transposase
D DNFV4_02723 transposase K07486 K07486; transposase
D DNFV4_02758 transposase K07486 K07486; transposase
D DNFV4_03732 transposase K07486 K07486; transposase
D DNFV4_03750 transposase K07486 K07486; transposase
D DNFV4_03986 transposase K07486 K07486; transposase
D DNFV4_00303 transposase K07486 K07486; transposase
D DNFV4_01059 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D DNFV4_03117 transposase K07493 K07493; putative transposase
D DNFV4_04583 transposase K07494 K07494; putative transposase
D DNFV4_01548 hypothetical protein K07497 K07497; putative transposase
D DNFV4_02219 hypothetical protein K07497 K07497; putative transposase
D DNFV4_02589 hypothetical protein K07497 K07497; putative transposase
D DNFV4_02605 hypothetical protein K07497 K07497; putative transposase
D DNFV4_02729 hypothetical protein K07497 K07497; putative transposase
D DNFV4_02734 hypothetical protein K07497 K07497; putative transposase
D DNFV4_03111 hypothetical protein K07497 K07497; putative transposase
D DNFV4_03981 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D DNFV4_00436 putative nucleoid-associated protein YbaB K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D DNFV4_00420 Methylthioribose transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D DNFV4_04620 Amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D DNFV4_04012 MFS transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family
D DNFV4_01135 putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D DNFV4_02181 Phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D DNFV4_03413 hypothetical protein K06320 cgeB; spore maturation protein CgeB
D DNFV4_02622 5-oxoprolinase component C K06350 kipA; antagonist of KipI
D DNFV4_02624 5-oxoprolinase component B K06351 kipI; inhibitor of KinA
D DNFV4_03161 Peptidase_M23 domain-containing protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D DNFV4_02808 hypothetical protein K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D DNFV4_01017 Peptide transporter CstA K06200 cstA; carbon starvation protein
D DNFV4_03958 50S ribosomal subunit assembly factor BipA K06207 typA; GTP-binding protein
D DNFV4_04079 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D DNFV4_01018 putative nucleotide binding protein YajQ K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D DNFV4_00838 Outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D DNFV4_04179 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D DNFV4_02569 Outer membrane protein H precursor K06142 hlpA; outer membrane protein
D DNFV4_03142 Outer membrane protein H precursor K06142 hlpA; outer membrane protein
D DNFV4_03143 Outer membrane protein H precursor K06142 hlpA; outer membrane protein
D DNFV4_00596 OMP_b-brl domain-containing protein K07275 ompW; outer membrane protein
D DNFV4_00953 hypothetical protein K07285 slp; outer membrane lipoprotein
D DNFV4_01777 hypothetical protein K07285 slp; outer membrane lipoprotein
D DNFV4_02300 hypothetical protein K07285 slp; outer membrane lipoprotein
D DNFV4_02581 hypothetical protein K07289 asmA; AsmA protein
D DNFV4_00110 Multidrug resistance efflux pump K01993 ABC-2.TX; HlyD family secretion protein
D DNFV4_01359 Efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D DNFV4_04442 Efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D DNFV4_02468 Phosphate-specific transport system accessory protein PhoU K02039 phoU; phosphate transport system protein
D DNFV4_03304 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D DNFV4_03866 Divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D DNFV4_03536 NnrS protein involved in response to NO K07234 K07234; uncharacterized protein involved in response to NO
D DNFV4_00083 Protein YchN K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D DNFV4_02910 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D DNFV4_02911 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D DNFV4_01435 Group 1 truncated hemoglobin K06886 glbN; hemoglobin
D DNFV4_02545 Patatin-like phospholipase family protein K07001 K07001; NTE family protein
D DNFV4_02204 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D DNFV4_03676 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D DNFV4_03968 putative iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D DNFV4_00259 putative iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D DNFV4_01829 putative Inner membrane protein YbcI K07038 K07038; inner membrane protein
D DNFV4_01916 Ribonuclease BN K07058 K07058; membrane protein
D DNFV4_03254 Ribonuclease BN K07058 K07058; membrane protein
D DNFV4_03259 Ribonuclease BN K07058 K07058; membrane protein
D DNFV4_04622 Ribonuclease BN K07058 K07058; membrane protein
D DNFV4_04448 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D DNFV4_00155 hypothetical protein K04750 phnB; PhnB protein
D DNFV4_00184 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D DNFV4_01415 putative heme-binding protein GlcG (modular protein) K11477 glcG; glc operon protein GlcG
D DNFV4_02381 LemA family protein K03744 lemA; LemA protein
D DNFV4_03515 hypothetical protein K00389 yidH; putative membrane protein
D DNFV4_00972 hypothetical protein K08972 K08972; putative membrane protein
D DNFV4_02131 SHOCT domain-containing protein K08982 K08982; putative membrane protein
D DNFV4_00161 hypothetical protein K08983 K08983; putative membrane protein
D DNFV4_03794 putative Inner membrane protein YjdF K08984 yjdF; putative membrane protein
D DNFV4_03795 hypothetical protein K08984 yjdF; putative membrane protein
D DNFV4_02383 TPM_phosphatase domain-containing protein K08988 K08988; putative membrane protein
C 99997 Function unknown
D DNFV4_01224 hypothetical protein K06867 K06867; uncharacterized protein
D DNFV4_02525 Ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D DNFV4_02382 TPM domain-containing protein K06872 K06872; uncharacterized protein
D DNFV4_03149 HD domain-containing protein K06885 K06885; uncharacterized protein
D DNFV4_02480 Thymidylate kinase K06888 K06888; uncharacterized protein
D DNFV4_04181 Peptidase K06889 K06889; uncharacterized protein
D DNFV4_04026 hypothetical protein K06903 W; Bacteriophage baseplate protein W
D DNFV4_04043 Phage tail protein K06907 FI; Bacteriophage tail sheath protein
D DNFV4_03071 hypothetical protein K06962 K06962; uncharacterized protein
D DNFV4_04590 Glyoxalase K06991 K06991; uncharacterized protein
D DNFV4_02143 Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07006 K07006; uncharacterized protein
D DNFV4_03649 Pyridoxamine 5-phosphate oxidase K07006 K07006; uncharacterized protein
D DNFV4_04249 hypothetical protein K07006 K07006; uncharacterized protein
D DNFV4_01227 Alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D DNFV4_00105 VOC family protein K07032 K07032; uncharacterized protein
D DNFV4_00106 hypothetical protein K07032 K07032; uncharacterized protein
D DNFV4_00157 Glyoxalase K07032 K07032; uncharacterized protein
D DNFV4_01821 Acetate uptake transporter K07034 K07034; uncharacterized protein
D DNFV4_01785 putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D DNFV4_04560 putative toxin-antitoxin system toxin component, PIN family K07063 K07063; uncharacterized protein
D DNFV4_04652 putative toxin-antitoxin system toxin component, PIN family K07063 K07063; uncharacterized protein
D DNFV4_00718 Ribonuclease VapC48 K07064 K07064; uncharacterized protein
D DNFV4_02533 Ribonuclease VapC K07064 K07064; uncharacterized protein
D DNFV4_02715 Ribonuclease VapC K07064 K07064; uncharacterized protein
D DNFV4_04331 Ribonuclease VapC K07064 K07064; uncharacterized protein
D DNFV4_02592 Ribonuclease VapC K07065 K07065; uncharacterized protein
D DNFV4_00379 Cell division inhibitor K07071 K07071; uncharacterized protein
D DNFV4_04338 hypothetical protein K07074 K07074; uncharacterized protein
D DNFV4_01589 hypothetical protein K07075 K07075; uncharacterized protein
D DNFV4_02731 DNA polymerase subunit beta K07075 K07075; uncharacterized protein
D DNFV4_04471 Protein adenylyltransferase MntA K07075 K07075; uncharacterized protein
D DNFV4_04188 Phosphoesterase (modular protein) K07095 K07095; uncharacterized protein
D DNFV4_03908 hypothetical protein K07097 K07097; uncharacterized protein
D DNFV4_00822 Metallophos domain-containing protein K07098 K07098; uncharacterized protein
D DNFV4_00030 hypothetical protein K07118 K07118; uncharacterized protein
D DNFV4_02430 hypothetical protein K07124 K07124; uncharacterized protein
D DNFV4_01775 hypothetical protein K07126 K07126; uncharacterized protein
D DNFV4_03049 hypothetical protein K07133 K07133; uncharacterized protein
D DNFV4_00213 AAA family ATPase K07133 K07133; uncharacterized protein
D DNFV4_00815 Lon family ATP-dependent protease K07157 K07157; uncharacterized protein
D DNFV4_01287 zf-RING_7 domain-containing protein K07164 K07164; uncharacterized protein
D DNFV4_00564 membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D DNFV4_02659 BFN domain-containing protein K08999 K08999; uncharacterized protein
D DNFV4_02660 BFN domain-containing protein K08999 K08999; uncharacterized protein
D DNFV4_03499 hypothetical protein K08999 K08999; uncharacterized protein
D DNFV4_04384 hypothetical protein K09004 K09004; uncharacterized protein
D DNFV4_04420 DrsE domain-containing protein K09004 K09004; uncharacterized protein
D DNFV4_03307 hypothetical protein K09005 K09005; uncharacterized protein
D DNFV4_04127 hypothetical protein K09005 K09005; uncharacterized protein
D DNFV4_01578 hypothetical protein K09117 K09117; uncharacterized protein
D DNFV4_03755 Mut7-C domain-containing protein K09122 K09122; uncharacterized protein
D DNFV4_04299 hypothetical protein K09129 K09129; uncharacterized protein
D DNFV4_03687 hypothetical protein K09131 K09131; uncharacterized protein
D DNFV4_01948 Cyclophil_like domain-containing protein K09143 K09143; uncharacterized protein
D DNFV4_01932 Ferritin K09700 K09700; uncharacterized protein
D DNFV4_01812 hypothetical protein K09706 K09706; uncharacterized protein
D DNFV4_04120 YlxP-like protein K09764 K09764; uncharacterized protein
D DNFV4_01268 Protein YciI K09780 K09780; uncharacterized protein
D DNFV4_01782 BrnT family toxin K09803 K09803; uncharacterized protein
D DNFV4_04353 BrnT family toxin K09803 K09803; uncharacterized protein
D DNFV4_04556 BrnT family toxin K09803 K09803; uncharacterized protein
D DNFV4_02625 putative 26 kDa periplasmic immunogenic protein K09807 K09807; uncharacterized protein
D DNFV4_04649 hypothetical protein K09822 K09822; uncharacterized protein
D DNFV4_00248 hypothetical protein K09822 K09822; uncharacterized protein
D DNFV4_00263 hypothetical protein K09822 K09822; uncharacterized protein
D DNFV4_02809 hypothetical protein K09859 K09859; uncharacterized protein
D DNFV4_00882 hypothetical protein K09922 K09922; uncharacterized protein
D DNFV4_03148 hypothetical protein K09928 K09928; uncharacterized protein
D DNFV4_02158 hypothetical protein K09930 K09930; uncharacterized protein
D DNFV4_03843 hypothetical protein K09930 K09930; uncharacterized protein
D DNFV4_03700 Glycosyltransferase K09931 K09931; uncharacterized protein
D DNFV4_02141 Nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein
D DNFV4_01454 hypothetical protein K09978 K09978; uncharacterized protein
D DNFV4_04645 Proline hydroxylase K09990 K09990; uncharacterized protein
D DNFV4_03691 hypothetical protein K01163 K01163; uncharacterized protein
D DNFV4_00796 RNase_H_2 domain-containing protein K07502 yprB; uncharacterized protein
D DNFV4_03759 Ribonuclease H-like domain-containing protein K07502 yprB; uncharacterized protein
D DNFV4_01134 Phosphate transport regulator (distant of PhoU) K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2024