+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Nicrophorus vespilloides (burying beetle)</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        108561860 mRNA cap guanine-N7 methyltransferase	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        108560556 cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        108561637 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        108559500 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2	K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] 
E        108564798 uncharacterized protein LOC108564798	K18708 FAM103A1; RNMT-activating mini protein 
D      Cap binding complex
E        108560101 nuclear cap-binding protein subunit 1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        108565708 nuclear cap-binding protein subunit 2-like	K12883 NCBP2; nuclear cap-binding protein subunit 2 
E        108567130 nuclear cap-binding protein subunit 2	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        108563001 cleavage and polyadenylation specificity factor subunit 5	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        108559368 cleavage and polyadenylation specificity factor subunit CG7185 isoform X1	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        108561836 protein CLP1 homolog	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
E        108567653 uncharacterized protein LOC108567653 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        108568341 cleavage and polyadenylation specificity factor subunit 1 isoform X1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        108557251 probable cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        108566329 cleavage and polyadenylation specificity factor 73	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        108563957 cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        108563563 pre-mRNA 3'-end-processing factor FIP1 isoform X1	K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 
E        108560117 pre-mRNA 3' end processing protein WDR33 isoform X1	K15542 PFS2; polyadenylation factor subunit 2 
E        108557305 LOW QUALITY PROTEIN: pre-mRNA 3' end processing protein WDR33-like	K15542 PFS2; polyadenylation factor subunit 2 
E        108568002 WD repeat-containing protein 82	K14962 WDR82; COMPASS component SWD2 
E        108567343 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108568542 serine/threonine-protein phosphatase alpha-2 isoform	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108564161 serine/threonine-protein phosphatase PP1-gamma catalytic subunit B-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        108558622 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        108558837 cleavage stimulation factor subunit 1	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        108562277 cleavage stimulation factor subunit 2 tau variant-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        108557463 cleavage stimulation factor subunit 2 tau variant-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        108561121 protein suppressor of forked	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        108562934 symplekin	K06100 SYMPK; symplekin 
D      U7-dependent histone pre-mRNA processing factors
E        108561034 small nuclear ribonucleoprotein-associated protein B	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        108568511 small nuclear ribonucleoprotein Sm D3	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        108565113 probable small nuclear ribonucleoprotein E	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        108559386 small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        108556637 probable small nuclear ribonucleoprotein G	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        108556547 U7 snRNA-associated Sm-like protein LSm10	K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 
E        108556991 U7 snRNA-associated Sm-like protein LSm11	K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 
E        108557251 probable cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        108566329 cleavage and polyadenylation specificity factor 73	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        108562277 cleavage stimulation factor subunit 2 tau variant-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        108557463 cleavage stimulation factor subunit 2 tau variant-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        108562934 symplekin	K06100 SYMPK; symplekin 
E        108568610 histone RNA hairpin-binding protein	K18710 SLBP; histone RNA hairpin-binding protein 
D      DRB sensitivity inducing factor (DSIF) complex
E        108564442 transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        108565570 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        108566374 transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
D      N6-methyltransferase complex
E        108560527 N6-adenosine-methyltransferase subunit METTL3	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        108560379 methyltransferase-like protein 14 homolog	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        108562323 methyltransferase-like protein 4	K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] 
E        108562140 methyltransferase-like protein 16 homolog	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        108566911 pre-mRNA-splicing regulator female-lethal(2)D	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        108564497 protein virilizer isoform X1	K22910 VIRMA; protein virilizer 
E        108559307 putative RNA-binding protein 15B	K13190 RBM15; RNA-binding protein 15 
E        108560474 putative RNA-binding protein 15B	K13190 RBM15; RNA-binding protein 15 
E        108568215 zinc finger CCCH domain-containing protein 13-like	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        108557864 E3 ubiquitin-protein ligase Hakai	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
D      Poly(A) addition factors
E        108560332 poly(A) polymerase type 3	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        108564533 poly(A) RNA polymerase gld-2 homolog A-like	K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] 
D      Negative regulators of mRNA 3' end processing
E        108557248 BRCA1-associated RING domain protein 1-like	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        108559302 RNA-binding protein 26 isoform X1	K13192 RBM26; RNA-binding protein 26 
E        108563162 TAR DNA-binding protein 43-like isoform X1	K23600 TARDBP; TAR DNA-binding protein 43 
C    Other processing factors
D      108556728 DNA/RNA-binding protein KIN17	K13102 KIN; DNA/RNA-binding protein KIN17 
D      108565400 methyltransferase-like protein 22 isoform X1	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      108560781 protein FAM46C	K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] 
D      108569539 zinc finger CCCH domain-containing protein 14	K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 
D      108569285 serrate RNA effector molecule homolog	K27103 SRRT; serrate RNA effector molecule 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        108556740 RNA-binding protein 8A	K12876 RBM8A; RNA-binding protein 8A 
E        108569902 RNA-binding protein 8A-like	K12876 RBM8A; RNA-binding protein 8A 
E        108566857 protein mago nashi	K12877 MAGOH; protein mago nashi 
E        108561296 THO complex subunit 4-A-like	K12881 THOC4; THO complex subunit 4 
E        108568688 THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        108559815 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        108559653 aly/REF export factor 2-like	K12881 THOC4; THO complex subunit 4 
E        108566004 ATP-dependent RNA helicase WM6	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        108562452 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        108561384 coiled-coil domain-containing protein 174	K25178 CCDC174; coiled-coil domain-containing protein 174 
E        108569617 protein CASC3-like	K14323 CASC3; protein CASC3 
E        108558796 uncharacterized protein LOC108558796	K14323 CASC3; protein CASC3 
E        108559875 histone deacetylase complex subunit SAP18	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        108564335 pinin isoform X1	K13114 PNN; pinin 
E        108563869 apoptotic chromatin condensation inducer in the nucleus	K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus 
E        108563310 RNA-binding protein with serine-rich domain 1	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        108563520 serine/arginine repetitive matrix protein 1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
D      TREX complex
E        108558138 THO complex subunit 1	K12878 THOC1; THO complex subunit 1 
E        108562217 THO complex subunit 2 isoform X1	K12879 THOC2; THO complex subunit 2 
E        108561296 THO complex subunit 4-A-like	K12881 THOC4; THO complex subunit 4 
E        108568688 THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        108559815 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        108559653 aly/REF export factor 2-like	K12881 THOC4; THO complex subunit 4 
E        108558513 THO complex subunit 5 homolog	K13174 THOC5; THO complex subunit 5 
E        108559809 THO complex subunit 6	K13175 THOC6; THO complex subunit 6 
E        108559761 THO complex subunit 7 homolog	K13176 THOC7; THO complex subunit 7 
D      TREX-2 complex
E        108556931 PCI domain-containing protein 2	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        108569470 26S proteasome complex subunit DSS1-like	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        108569118 26S proteasome complex subunit DSS1-like	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        108558830 transcription and mRNA export factor SUS1-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
D      Nuclear pore complex
E        108559971 nucleoprotein TPR isoform X1	K09291 TPR; nucleoprotein TPR 
E        108559285 mRNA export factor	K14298 RAE1; mRNA export factor 
E        108561771 protein SEC13 homolog	K14004 SEC13; protein transport protein SEC13 
E        108559840 nucleoporin Nup37	K14302 NUP37; nuclear pore complex protein Nup37 
E        108561248 nuclear pore complex protein Nup85	K14304 NUP85; nuclear pore complex protein Nup85 
E        108562751 nucleoporin Nup43	K14305 NUP43; nuclear pore complex protein Nup43 
E        108565169 nuclear pore complex protein Nup50	K14295 NUP50; nuclear pore complex protein Nup50 
E        108569013 nuclear pore complex protein Nup54	K14308 NUP54; nuclear pore complex protein Nup54 
E        108565270 nuclear pore glycoprotein p62	K14306 NUP62; nuclear pore complex protein Nup62 
E        108558074 nuclear pore complex protein Nup88	K14318 NUP88; nuclear pore complex protein Nup88 
E        108565532 nuclear pore complex protein Nup93-like	K14309 NUP93; nuclear pore complex protein Nup93 
E        108564873 nuclear pore complex protein Nup98-Nup96 isoform X1	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        108564082 collagen alpha-1(I) chain-like	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        108558291 nuclear pore complex protein Nup107	K14301 NUP107; nuclear pore complex protein Nup107 
E        108559647 nuclear pore complex protein Nup133	K14300 NUP133; nuclear pore complex protein Nup133 
E        108558933 nucleoporin NUP188 homolog isoform X1	K14311 NUP188; nuclear pore complex protein Nup188 
E        108565051 nuclear pore complex protein Nup153	K14296 NUP153; nuclear pore complex protein Nup153 
E        108564532 nuclear pore complex protein Nup155	K14312 NUP155; nuclear pore complex protein Nup155 
E        108560768 nuclear pore complex protein Nup160 homolog	K14303 NUP160; nuclear pore complex protein Nup160 
E        108558824 nucleoporin NUP53	K14313 NUP35; nuclear pore complex protein Nup53 
E        108569288 nuclear pore complex protein Nup205	K14310 NUP205; nuclear pore complex protein Nup205 
E        108561208 nuclear pore membrane glycoprotein 210	K14314 NUP210; nuclear pore complex protein Nup210 
E        108559629 nuclear pore complex protein DDB_G0274915-like	K14317 NUP214; nuclear pore complex protein Nup214 
E        108559682 nucleoporin p58/p45 isoform X1	K14307 NUPL1; nucleoporin p58/p45 
E        108557460 nucleoporin NDC1-like	K14315 NDC1; nucleoporin NDC1 
E        108566040 nucleoporin seh1 isoform X1	K14299 SEH1; nucleoporin SEH1 
E        108559926 ranBP2-like and GRIP domain-containing protein 4	K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] 
E        108564765 aladin-like	K14320 AAAS; aladin 
E        108557035 nuclear pore complex protein DDB_G0274915-like	K18716 NUP42; nucleoporin NUP42 
E        108566253 nucleoporin GLE1	K18723 GLE1; nucleoporin GLE1 
E        108568803 nuclear RNA export factor 1	K14284 NXF; nuclear RNA export factor 
E        108559648 uncharacterized protein LOC108559648 isoform X1	K14284 NXF; nuclear RNA export factor 
E        108563768 NTF2-related export protein	K14285 NXT1_2; NTF2-related export protein 1/2 
D      Ran-mediated transport factors
E        108557121 GTP-binding nuclear protein Ran	K07936 RAN; GTP-binding nuclear protein Ran 
E        108565278 acidic leucine-rich nuclear phosphoprotein 32 family member A	K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D 
E        108568737 ELAV-like protein 3 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        108566280 FAS-associated factor 2	K18726 FAF2; FAS-associated factor 2 
E        108566138 transitional endoplasmic reticulum ATPase TER94 isoform X1	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        108566423 exportin-1	K14290 XPO1; exportin-1 
E        108565275 exportin-7 isoform X1	K18460 XPO7; exportin-7 
E        108564484 ran GTPase-activating protein 1-like	K14319 RANGAP1; Ran GTPase-activating protein 1 
D      eIF4F and regulatory proteins
E        108566241 eukaryotic translation initiation factor 4E type 2 isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        108560675 eukaryotic translation initiation factor 4E-1A isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        108569395 eukaryotic initiation factor 4A-I	K03257 EIF4A; translation initiation factor 4A 
E        108565375 eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        108558618 eukaryotic translation initiation factor 4 gamma 3-like isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        108559524 eukaryotic translation initiation factor 4B	K03258 EIF4B; translation initiation factor 4B 
E        108563455 eukaryotic translation initiation factor 4H-like	K24086 EIF4H; translation initiation factor 4H 
E        108565331 eukaryotic translation initiation factor 4E-binding protein 1	K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 
E        108564826 eukaryotic translation initiation factor 4E transporter-like isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        108556316 protein angel	K18729 ANGEL; protein angel 
E        108569663 synaptic functional regulator FMR1-like isoform X1	K15516 FMR; fragile X mental retardation protein 
E        108564704 synaptic functional regulator FMR1-like	K15516 FMR; fragile X mental retardation protein 
E        108567217 cytoplasmic FMR1-interacting protein	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        108559423 gem-associated protein 5	K13133 GEMIN5; gem associated protein 5 
E        108561019 cytoplasmic polyadenylation element-binding protein 2	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        108567772 cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        108568205 ATP-dependent RNA helicase bel	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108567701 PERQ amino acid-rich with GYF domain-containing protein 2 isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        108562950 polyadenylate-binding protein-like	K13126 PABPC; polyadenylate-binding protein 
E        108569548 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        108557681 polyadenylate-binding protein 4-like isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        108565763 uncharacterized protein LOC108565763	K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
E        108569151 polyadenylate-binding protein-interacting protein 2B isoform X1	K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 
E        108561724 helicase SKI2W	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        108561621 deformed epidermal autoregulatory factor 1	K23041 DEAF1; deformed epidermal autoregulatory factor 1 
E        108569822 malignant T-cell-amplified sequence 1 homolog	K07575 MCTS; malignant T-cell-amplified sequence 
E        108558128 density-regulated protein homolog	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
D      Other transport factors
E        108561282 partner of Y14 and mago	K14294 WIBG; partner of Y14 and mago 
E        108560194 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108559188 RNA-binding protein Musashi homolog Rbp6 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        108560386 RNA-binding protein Musashi homolog 2 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        108566824 heterogeneous nuclear ribonucleoprotein 27C isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        108568360 HBS1-like protein isoform X1	K14416 HBS1; elongation factor 1 alpha-like protein 
E        108568650 protein pelota	K06965 PELO; protein pelota 
E        108562125 polyadenylate-binding protein-interacting protein 9-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108565458 polyadenylate-binding protein 2-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108563189 polyadenylate-binding protein 2-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108563192 polyadenylate-binding protein 2-B-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108563193 polyadenylate-binding protein 2-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108557051 nucleolin-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108566838 polyadenylate-binding protein 2-B-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108566843 polyadenylate-binding protein 2-B-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108566879 polyadenylate-binding protein 2-A-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108566880 polyadenylate-binding protein 2-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108557558 putative RNA-binding protein EEED8.4	K14396 PABPN1; polyadenylate-binding protein 2 
E        108558628 polyadenylate-binding protein 2-like isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        108566924 polyadenylate-binding protein 2-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108566936 polyadenylate-binding protein 2-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108566939 polyadenylate-binding protein 2-like isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        108566837 polyadenylate-binding protein 2-B-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108562951 RNA-binding protein SGN1-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        108568280 DEAD-box helicase Dbp80	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        108556352 pre-mRNA-splicing factor SYF1	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        108556398 SAP domain-containing ribonucleoprotein	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        108559568 regulator of chromosome condensation isoform X1	K11493 RCC1; regulator of chromosome condensation 
E        108558627 la-related protein 6	K18733 LARP6; la-related protein 6 
E        108568497 transcriptional activator protein Pur-beta isoform X1	K21772 PURA; transcriptional activator protein Pur-alpha 
E        108563984 polymerase delta-interacting protein 3-like	K22414 POLDIP3; polymerase delta-interacting protein 3 
E        108559830 zinc finger CCCH domain-containing protein 11A-like isoform X1	K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 
E        108559929 leukocyte receptor cluster member 8 homolog	K23802 LENG8; SAC3 family protein LENG8/THP3 
C    Surveillance factors
D      Surveillance complex
E        108567422 eukaryotic peptide chain release factor subunit 1 isoform X1	K03265 ETF1; peptide chain release factor subunit 1 
E        108568773 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like	K03267 ERF3; peptide chain release factor subunit 3 
E        108562274 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        108563710 regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
E        108565777 regulator of nonsense transcripts 3A	K14328 UPF3; regulator of nonsense transcripts 3 
D      Protein phosphatase 2A
E        108568419 serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        108558853 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        108559907 serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        108557542 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        108556896 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        108563485 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        108556775 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        108564948 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        108566488 serine/threonine-protein kinase SMG1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        108563702 protein SMG5	K11125 SMG5; protein SMG5 
E        108558292 telomerase-binding protein EST1A isoform X1	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        108563201 protein SMG7-like	K14409 SMG7; protein SMG7 
E        108567981 protein SMG8 isoform X1	K18734 SMG8; protein SMG8 
E        108566459 protein SMG9 isoform X1	K18735 SMG9; protein SMG9 
E        108567701 PERQ amino acid-rich with GYF domain-containing protein 2 isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        108569906 probable ATP-dependent RNA helicase DHX34	K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] 
E        108557533 GTP-binding protein 1 isoform X1	K24887 GTPBP1; GTP-binding protein 1 
C    Factors involved in mRNA localization
D      Cargo complex
E        108566813 protein penguin	K14844 PUF6; pumilio homology domain family member 6 
E        108559662 unconventional myosin-Va	K10357 MYO5; myosin V 
E        108566163 protein bicaudal D	K18739 BICD; protein bicaudal D 
E        108561198 uncharacterized protein LOC108561198	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
E        108564926 piRNA biogenesis protein EXD1-like	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
E        108564927 piRNA biogenesis protein EXD1-like	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
D      Factors that have mRNA localization signals
E        108557032 actin-5C	K05692 ACTB_G1; actin beta/gamma 1 
E        108561707 myc proto-oncogene protein-like	K04377 MYC; Myc proto-oncogene protein 
E        108556935 T-box-containing protein TBX6L	K10180 TBX6; T-box protein 6 
E        108558107 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        108558108 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        108562303 protein hairy-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        108569181 protein deadpan-like	K09090 HESN; hairy and enhancer of split, invertebrate 
D      Trans-acting binding proteins
E        108565662 far upstream element-binding protein 1 isoform X1	K13210 FUBP; far upstream element-binding protein 
E        108562812 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        108568752 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        108556324 elongation factor 1-gamma	K03233 EEF1G; elongation factor 1-gamma 
E        108559852 uncharacterized protein LOC108559852	K16220 HAX1; HCLS1-associated protein X-1 
E        108560700 arf-GAP domain and FG repeat-containing protein 1 isoform X1	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
E        108557329 double-stranded RNA-binding protein Staufen homolog 2 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        108565614 polypyrimidine tract-binding protein 1 isoform X1	K13218 PTBP1; polypyrimidine tract-binding protein 1 
E        108560440 RNA-binding protein squid isoform X1	K03102 SQD; squid 
E        108561019 cytoplasmic polyadenylation element-binding protein 2	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        108567772 cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
D      Other mRNA localization factors
E        108569663 synaptic functional regulator FMR1-like isoform X1	K15516 FMR; fragile X mental retardation protein 
E        108564704 synaptic functional regulator FMR1-like	K15516 FMR; fragile X mental retardation protein 
E        108567217 cytoplasmic FMR1-interacting protein	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        108565018 poly(rC)-binding protein 3 isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        108567172 caprin homolog	K18743 CAPRIN1; caprin-1 
E        108560423 CUGBP Elav-like family member 1-A isoform X1	K02177 BRU; bruno 
E        108562876 maternal protein exuperantia	K18745 EXU; maternal protein exuperantia 
E        108564794 Y-box factor homolog isoform X1	K09276 YBX1; Y-box-binding protein 1 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        108563534 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        108569112 protein argonaute-2 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108561374 protein argonaute-3-like isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        108566241 eukaryotic translation initiation factor 4E type 2 isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        108560675 eukaryotic translation initiation factor 4E-1A isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        108562274 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        108568205 ATP-dependent RNA helicase bel	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        108565157 putative ATP-dependent RNA helicase me31b	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        108558373 RNA-binding protein MEX3B	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        108565789 protein LSM14 homolog A isoform X1	K18749 LSM14; protein LSM14 
E        108564794 Y-box factor homolog isoform X1	K09276 YBX1; Y-box-binding protein 1 
E        108565227 LIM domain-containing protein jub isoform X1	K16682 AJUBA; LIM domain-containing protein 
E        108556912 putative helicase mov-10-B.1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        108557108 proline-rich nuclear receptor coactivator 2	K18751 PNRC2; proline-rich nuclear receptor coactivator 2 
E        108567741 transportin-1 isoform X1	K18752 TNPO1; transportin-1 
E        108566488 serine/threonine-protein kinase SMG1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        108563702 protein SMG5	K11125 SMG5; protein SMG5 
E        108558292 telomerase-binding protein EST1A isoform X1	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        108563201 protein SMG7-like	K14409 SMG7; protein SMG7 
E        108558422 protein TIS11 isoform X1	K15308 TTP; tristetraprolin 
E        108567262 protein lin-28 homolog	K18754 LIN28; protein lin-28 
E        108566239 huntingtin	K04533 HD; huntingtin 
E        108567467 protein bicaudal C	K18756 BICC1; protein bicaudal C 
E        108560194 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        108568556 cAMP-dependent protein kinase catalytic subunit gamma-like	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        108568850 cAMP-dependent protein kinase catalytic subunit	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        108558260 la-related protein 1B isoform X1	K18757 LARP1; la-related protein 1 
E        108568522 ataxin-2 homolog isoform X1	K23625 ATXN2_2L; ataxin 2/2L 
D      P-body specific factors
E        108563721 m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        108558394 uncharacterized protein LOC108558394	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        108564917 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        108559948 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        108566870 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        108562122 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        108560316 U6 snRNA-associated Sm-like protein LSm5 isoform X1	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        108566715 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        108558114 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        108566126 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        108568992 kinesin light chain isoform X1	K10407 KLC; kinesin light chain 
E        108559662 unconventional myosin-Va	K10357 MYO5; myosin V 
E        108558554 tubulin alpha-1 chain	K07374 TUBA; tubulin alpha 
E        108565025 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        108562471 tubulin alpha-8 chain-like	K07374 TUBA; tubulin alpha 
E        108562472 tubulin alpha-8 chain-like	K07374 TUBA; tubulin alpha 
E        108569771 tubulin alpha-8 chain-like	K07374 TUBA; tubulin alpha 
E        108566022 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        108562972 tubulin alpha-4 chain-like	K07374 TUBA; tubulin alpha 
E        108560575 tubulin alpha-1 chain-like	K07374 TUBA; tubulin alpha 
E        108561019 cytoplasmic polyadenylation element-binding protein 2	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        108567772 cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        108559423 gem-associated protein 5	K13133 GEMIN5; gem associated protein 5 
E        108569744 protein Gawky isoform X1	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        108563358 CCR4-NOT transcription complex subunit 1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        108556295 regulator of gene activity isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        108562144 CCR4-NOT transcription complex subunit 3	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        108566127 uncharacterized protein LOC108566127	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        108566863 CCR4-NOT transcription complex subunit 6-like isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        108569826 CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108568813 DIS3-like exonuclease 2	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        108558559 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        108565272 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        108563841 protein Tob1-like	K14443 TOB; protein Tob/BTG 
E        108566054 protein BTG1-like	K14443 TOB; protein Tob/BTG 
E        108564826 eukaryotic translation initiation factor 4E transporter-like isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        108559258 protein PAT1 homolog 1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        108565961 enhancer of mRNA-decapping protein 3 isoform X1	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        108568636 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        108563710 regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
E        108565777 regulator of nonsense transcripts 3A	K14328 UPF3; regulator of nonsense transcripts 3 
E        108559036 E3 ubiquitin-protein ligase TRIM71-like isoform X1	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        108568315 RING finger protein nhl-1	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        108568589 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        108556884 YTH domain-containing family protein 3 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        108559227 nucleolysin TIAR isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        108567879 nucleolysin TIAR	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        108562950 polyadenylate-binding protein-like	K13126 PABPC; polyadenylate-binding protein 
E        108569548 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        108557681 polyadenylate-binding protein 4-like isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        108557329 double-stranded RNA-binding protein Staufen homolog 2 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        108569663 synaptic functional regulator FMR1-like isoform X1	K15516 FMR; fragile X mental retardation protein 
E        108564704 synaptic functional regulator FMR1-like	K15516 FMR; fragile X mental retardation protein 
E        108560439 ras GTPase-activating protein-binding protein 2	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        108561863 eukaryotic translation initiation factor 2A	K15026 EIF2A; translation initiation factor 2A 
E        108566894 eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        108569395 eukaryotic initiation factor 4A-I	K03257 EIF4A; translation initiation factor 4A 
E        108562452 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        108559524 eukaryotic translation initiation factor 4B	K03258 EIF4B; translation initiation factor 4B 
E        108565375 eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        108558618 eukaryotic translation initiation factor 4 gamma 3-like isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        108568641 ribosomal protein S6 kinase alpha-1-like	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        108568418 guanine nucleotide-binding protein subunit beta-like protein isoform X1	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        108568803 nuclear RNA export factor 1	K14284 NXF; nuclear RNA export factor 
E        108559648 uncharacterized protein LOC108559648 isoform X1	K14284 NXF; nuclear RNA export factor 
E        108567267 tudor domain-containing protein 3	K18404 TDRD3; tudor domain-containing protein 3 
E        108561383 uncharacterized protein LOC108561383 isoform X1	K18763 LARP4; la-related protein 4 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        108558394 uncharacterized protein LOC108558394	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        108563721 m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        108565157 putative ATP-dependent RNA helicase me31b	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        108565961 enhancer of mRNA-decapping protein 3 isoform X1	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        108568636 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        108559258 protein PAT1 homolog 1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
D      Lsm complex
E        108564917 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        108559948 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        108566870 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        108562122 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        108560316 U6 snRNA-associated Sm-like protein LSm5 isoform X1	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        108566715 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        108558114 U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        108566126 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        108563534 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        108567867 5'-3' exoribonuclease 2 homolog	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
D      Other 5'-3' decay factors
E        108563755 m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        108556725 probable helicase with zinc finger domain isoform X1	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
C    3'-5' decay
D      Core exosome factors
E        108568607 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
E        108560924 exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        108560384 exosome complex component RRP40	K03681 RRP40; exosome complex component RRP40 
E        108567828 exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41 
E        108568567 exosome complex component RRP46	K12590 RRP46; exosome complex component RRP46 
E        108559245 exosome complex component MTR3-like	K12587 MTR3; exosome complex component MTR3 
E        108564099 exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
E        108563099 exosome complex component RRP43-like	K12586 RRP43; exosome complex component RRP43 
E        108569219 exosome complex component rrp45	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        108569113 exosome component 10	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        108569910 nuclear nucleic acid-binding protein C1D-like	K12592 C1D; exosome complex protein LRP1 
E        108569820 M-phase phosphoprotein 6	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
D      TRAMP complex
E        108559281 non-canonical poly(A) RNA polymerase PAPD5-like	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        108557812 superkiller viralicidic activity 2-like 2	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        108561724 helicase SKI2W	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        108568625 tetratricopeptide repeat protein 37	K12600 SKI3; superkiller protein 3 
E        108559526 WD repeat-containing protein 61	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        108566863 CCR4-NOT transcription complex subunit 6-like isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        108563358 CCR4-NOT transcription complex subunit 1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        108556295 regulator of gene activity isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        108562144 CCR4-NOT transcription complex subunit 3	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        108566127 uncharacterized protein LOC108566127	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        108569826 CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        108568292 cell differentiation protein RCD1 homolog	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        108568568 CCR4-NOT transcription complex subunit 10	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
D      Pan complex
E        108558559 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        108565272 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
D      Other 3'-5' decay factors
E        108556826 poly(A)-specific ribonuclease PARN-like	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        108567572 poly(A)-specific ribonuclease PARN-like domain-containing protein 1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        108569748 ATP-dependent RNA helicase DHX36-like	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        108563841 protein Tob1-like	K14443 TOB; protein Tob/BTG 
E        108566054 protein BTG1-like	K14443 TOB; protein Tob/BTG 
E        108556280 nocturnin isoform X1	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        108564348 ERI1 exoribonuclease 2	K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] 
E        108563755 m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        108557730 2',5'-phosphodiesterase 12	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        108560715 2',5'-phosphodiesterase 12-like	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        108556725 probable helicase with zinc finger domain isoform X1	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
E        108565573 protein NRDE2 homolog	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        108563551 protein Smaug homolog 1	K27396 SMG; protein Smaug 
E        108561883 uncharacterized protein LOC108561883	K27498 FOCAD; focadhesin 
C    Other degradation factors
D      RNases
E        108556687 LOW QUALITY PROTEIN: probable ribonuclease ZC3H12D	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        108562916 ribonuclease 3 isoform X1	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
E        108569157 oligoribonuclease, mitochondrial	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
D      Other RNA degradosome components
E        108563925 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        108556819 polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        108565734 ATP-dependent 6-phosphofructokinase isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        108567647 heat shock 70 kDa protein cognate 5	K04043 dnaK; molecular chaperone DnaK 
E        108557652 60 kDa heat shock protein, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        108560924 exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        108568607 exosome complex component CSL4	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        108567828 exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41 
E        108564099 exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
D      Others
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#<hr>
#[ <a href="/kegg/brite.html">BRITE</a> | <a href="/kegg/kegg2.html">KEGG2</a> | <a href="/kegg/">KEGG</a> ]<br>
#Last updated: April 25, 2024