+D GENES KO #

  KEGG Orthology (KO) - Nitrosococcus wardiae

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:nwr00010] D E3U44_13185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D E3U44_17720 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D E3U44_15170 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D E3U44_01950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D E3U44_04055 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D E3U44_16535 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3U44_12535 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E3U44_06980 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E3U44_02940 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D E3U44_06965 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D E3U44_06970 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D E3U44_16465 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D E3U44_04000 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E3U44_15175 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E3U44_10515 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E3U44_12830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3U44_06975 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3U44_15530 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D E3U44_11630 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D E3U44_14380 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3U44_11220 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3U44_14375 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3U44_11225 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3U44_14370 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D E3U44_11635 biotin/lipoyl-binding protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D E3U44_11640 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11230 FAD-binding protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_03625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_10585 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E3U44_14630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3U44_03390 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:nwr00020] D E3U44_16250 citryl-CoA lyase K01647 CS; citrate synthase [EC:2.3.3.1] D E3U44_01305 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D E3U44_15870 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D E3U44_11255 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D E3U44_09910 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D E3U44_03635 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D E3U44_03630 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D E3U44_11640 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11230 FAD-binding protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_03625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_01260 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D E3U44_01265 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D E3U44_00755 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D E3U44_00750 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D E3U44_00765 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D E3U44_00760 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D E3U44_13580 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D E3U44_06050 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D E3U44_14635 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D E3U44_14640 oadA; oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D E3U44_11630 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D E3U44_14380 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3U44_11220 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3U44_14375 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3U44_11225 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3U44_14370 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D E3U44_11635 biotin/lipoyl-binding protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:nwr00030] D E3U44_17720 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D E3U44_08420 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D E3U44_13180 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D E3U44_11440 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D E3U44_00865 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D E3U44_15140 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D E3U44_06960 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D E3U44_12780 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D E3U44_11455 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D E3U44_01530 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D E3U44_00570 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D E3U44_14630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3U44_03390 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D E3U44_12785 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D E3U44_04300 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D E3U44_07185 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D E3U44_11030 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D E3U44_03330 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D E3U44_16535 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3U44_12535 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E3U44_06980 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E3U44_04055 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D E3U44_15170 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D E3U44_01950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:nwr00040] D E3U44_07895 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D E3U44_09390 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E3U44_00865 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D E3U44_16030 carbohydrate kinase K22935 XK1; D-ribulokinase [EC:2.7.1.47] C 00051 Fructose and mannose metabolism [PATH:nwr00051] D E3U44_04205 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D E3U44_00820 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D E3U44_03390 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D E3U44_16600 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D E3U44_16595 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D E3U44_15170 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D E3U44_01950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D E3U44_04055 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D E3U44_01960 ketohexokinase K00846 KHK; ketohexokinase [EC:2.7.1.3] D E3U44_16535 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3U44_12535 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E3U44_06980 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E3U44_02940 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D E3U44_06080 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:nwr00052] D E3U44_09070 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E3U44_16705 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E3U44_09390 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E3U44_14630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3U44_03390 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D E3U44_13185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D E3U44_15170 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D E3U44_01950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D E3U44_05855 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D E3U44_04935 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:nwr00053] D E3U44_07895 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D E3U44_01380 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:nwr00500] D E3U44_04210 HAD-IIB family hydrolase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14] D E3U44_04215 sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13] D E3U44_05855 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D E3U44_04935 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D E3U44_06545 amylosucrase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D E3U44_09390 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E3U44_15840 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D E3U44_17710 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D E3U44_03650 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D E3U44_08415 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D E3U44_09655 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D E3U44_17715 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D E3U44_11200 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D E3U44_12100 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D E3U44_09665 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D E3U44_15235 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D E3U44_17705 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D E3U44_09935 glycoside hydrolase family 57 K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D E3U44_09660 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D E3U44_11430 alpha-amylase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D E3U44_13405 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D E3U44_17085 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D E3U44_13435 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D E3U44_13430 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D E3U44_10890 otsB; trehalose-phosphatase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D E3U44_11435 glycoside hydrolase family 15 protein K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28] D E3U44_14630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3U44_03390 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D E3U44_13185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D E3U44_17720 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D E3U44_04205 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:nwr00520] D E3U44_11475 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D E3U44_04205 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D E3U44_04200 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D E3U44_02945 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D E3U44_04195 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D E3U44_17690 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D E3U44_08650 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D E3U44_08655 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D E3U44_06175 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D E3U44_02015 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D E3U44_08130 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D E3U44_01375 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D E3U44_15375 SDR family oxidoreductase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D E3U44_13185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D E3U44_14630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3U44_03390 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D E3U44_09390 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E3U44_07895 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D E3U44_16725 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D E3U44_09070 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E3U44_16705 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E3U44_01380 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D E3U44_06080 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D E3U44_17720 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D E3U44_00820 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D E3U44_16600 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D E3U44_16595 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D E3U44_15405 NAD-dependent epimerase/dehydratase family protein K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10] D E3U44_15840 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D E3U44_17710 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:nwr00620] D E3U44_10585 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E3U44_11630 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D E3U44_14380 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3U44_11220 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3U44_14375 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3U44_11225 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3U44_14370 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D E3U44_11635 biotin/lipoyl-binding protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D E3U44_11640 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11230 FAD-binding protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_03625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_13400 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D E3U44_12830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3U44_06975 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3U44_10495 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D E3U44_02300 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D E3U44_02305 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D E3U44_13850 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D E3U44_17810 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_15300 thiamine pyrophosphate-requiring protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D E3U44_17140 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D E3U44_14595 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D E3U44_11675 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D E3U44_04585 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D E3U44_16525 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D E3U44_14635 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D E3U44_14640 oadA; oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D E3U44_06050 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D E3U44_13580 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D E3U44_09630 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D E3U44_08410 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D E3U44_15530 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D E3U44_09615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09675 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_00990 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:nwr00630] D E3U44_10585 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E3U44_06050 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D E3U44_16250 citryl-CoA lyase K01647 CS; citrate synthase [EC:2.3.3.1] D E3U44_01305 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D E3U44_15870 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D E3U44_11255 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D E3U44_09615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09675 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_11120 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D E3U44_10475 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D E3U44_10460 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D E3U44_18960 4Fe-4S dicluster domain-containing protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D E3U44_18575 catalase K03781 katE; catalase [EC:1.11.1.6] D E3U44_11310 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D E3U44_10305 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D E3U44_00870 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D E3U44_06985 hypothetical protein K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D E3U44_11130 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D E3U44_14100 gltB; glutamate synthase large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] D E3U44_01445 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3U44_11340 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E3U44_17695 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D E3U44_02830 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D E3U44_04225 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D E3U44_11640 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11230 FAD-binding protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_03625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_17700 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D E3U44_11125 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D E3U44_15020 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma C 00640 Propanoate metabolism [PATH:nwr00640] D E3U44_10585 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E3U44_13400 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D E3U44_17230 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D E3U44_17235 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D E3U44_17240 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D E3U44_11640 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11230 FAD-binding protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_03625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_09735 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D E3U44_09610 crotonase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14700 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_10495 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D E3U44_02300 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D E3U44_02305 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D E3U44_13850 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D E3U44_01265 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D E3U44_01260 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D E3U44_17255 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D E3U44_13140 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D E3U44_17250 bifunctional 2-methylcitrate dehydratase/aconitate hydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D E3U44_11255 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D E3U44_17260 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:nwr00650] D E3U44_09615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09675 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09610 crotonase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14700 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_00755 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D E3U44_00750 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D E3U44_00765 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D E3U44_00760 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D E3U44_05645 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D E3U44_09690 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D E3U44_09730 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D E3U44_16255 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3U44_01010 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3U44_01005 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:nwr00660] D E3U44_16255 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3U44_01010 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3U44_01005 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D E3U44_01265 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D E3U44_01260 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D E3U44_05900 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D E3U44_13890 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D E3U44_13885 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:nwr00562] D E3U44_17060 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D E3U44_01235 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D E3U44_06275 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D E3U44_02940 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:nwr00190] D E3U44_02925 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D E3U44_14415 NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D E3U44_02920 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D E3U44_14420 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D E3U44_02915 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D E3U44_02910 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D E3U44_14425 nuoC; NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D E3U44_02905 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D E3U44_14430 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D E3U44_02900 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D E3U44_14435 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D E3U44_02895 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D E3U44_14440 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D E3U44_02890 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D E3U44_14445 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D E3U44_02885 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D E3U44_14450 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D E3U44_02880 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D E3U44_14455 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D E3U44_02875 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D E3U44_14460 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D E3U44_02870 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D E3U44_14465 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D E3U44_02865 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D E3U44_14470 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D E3U44_02860 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D E3U44_14475 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D E3U44_10900 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D E3U44_00755 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D E3U44_00750 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D E3U44_00765 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D E3U44_00760 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D E3U44_04755 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D E3U44_04750 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D E3U44_04745 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D E3U44_03760 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D E3U44_10225 oxidase K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9] D E3U44_03785 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D E3U44_10220 cytochrome c oxidase subunit 3 family protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D E3U44_06350 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D E3U44_03795 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D E3U44_10215 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D E3U44_15270 ctaD; cytochrome c oxidase subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D E3U44_13160 ctaD; cytochrome c oxidase subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D E3U44_15455 ctaD; cytochrome c oxidase subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D E3U44_06345 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D E3U44_15265 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D E3U44_13155 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D E3U44_15450 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D E3U44_03800 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D E3U44_10210 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D E3U44_03790 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D E3U44_03765 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D E3U44_14395 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D E3U44_14390 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D E3U44_12955 alternate F1F0 ATPase, F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D E3U44_04175 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D E3U44_13935 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D E3U44_04185 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D E3U44_12950 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D E3U44_04180 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D E3U44_04170 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D E3U44_13940 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D E3U44_04190 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D E3U44_12970 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D E3U44_04155 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D E3U44_12960 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D E3U44_04165 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D E3U44_12965 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D E3U44_04160 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D E3U44_00415 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D E3U44_00410 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D E3U44_00440 ATPase K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D E3U44_00405 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D E3U44_00420 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D E3U44_00445 ATPase K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D E3U44_00435 ATPase K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D E3U44_00430 ATPase K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D E3U44_14355 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D E3U44_08780 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:nwr00710] D E3U44_06985 hypothetical protein K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D E3U44_06970 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D E3U44_06965 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D E3U44_16535 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3U44_12535 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E3U44_06980 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E3U44_04055 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D E3U44_15140 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D E3U44_06960 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D E3U44_01530 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D E3U44_06885 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D E3U44_02940 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D E3U44_00865 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D E3U44_09630 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D E3U44_08410 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D E3U44_04585 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D E3U44_16525 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D E3U44_06050 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:nwr00680] D E3U44_00915 methane monooxygenase/ammonia monooxygenase subunit A K10944 pmoA-amoA; methane/ammonia monooxygenase subunit A [EC:1.14.18.3 1.14.99.39] D E3U44_00910 methane monooxygenase/ammonia monooxygenase subunit B K10945 pmoB-amoB; methane/ammonia monooxygenase subunit B D E3U44_00920 methane monooxygenase/ammonia monooxygenase subunit C K10946 pmoC-amoC; methane/ammonia monooxygenase subunit C D E3U44_15020 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D E3U44_11340 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E3U44_11130 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D E3U44_11310 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D E3U44_10515 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E3U44_09630 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D E3U44_08410 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D E3U44_06050 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D E3U44_16535 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3U44_12535 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E3U44_06980 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D E3U44_04055 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D E3U44_15170 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D E3U44_01950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D E3U44_06770 sarcosine oxidase subunit beta family protein K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5] D E3U44_06775 sarcosine oxidase subunit delta family protein K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5] D E3U44_06780 sarcosine oxidase subunit alpha family protein K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5] D E3U44_06785 hypothetical protein K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5] D E3U44_04040 formylmethanofuran dehydrogenase subunit A K00200 fwdA; formylmethanofuran dehydrogenase subunit A [EC:1.2.7.12] D E3U44_04035 formylmethanofuran dehydrogenase subunit B K00201 fwdB; formylmethanofuran dehydrogenase subunit B [EC:1.2.7.12] D E3U44_04050 formylmethanofuran dehydrogenase subunit C K00202 fwdC; formylmethanofuran dehydrogenase subunit C [EC:1.2.7.12] D E3U44_04045 fhcD; formylmethanofuran--tetrahydromethanopterin N-formyltransferase K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101] D E3U44_04675 methenyltetrahydromethanopterin cyclohydrolase K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27] D E3U44_04695 methylenetetrahydrofolate dehydrogenase K00300 mtdA; methylenetetrahydrofolate/methylenetetrahydromethanopterin dehydrogenase (NADP+) [EC:1.5.1.5 1.5.1.-] D E3U44_04660 fae; formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147] D E3U44_13400 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D E3U44_10585 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E3U44_15530 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D E3U44_16465 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D E3U44_04000 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E3U44_15175 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E3U44_10280 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E3U44_10275 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D E3U44_00925 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D E3U44_04650 ATP-grasp domain-containing protein K06914 mfnD; tyramine---L-glutamate ligase [EC:6.3.4.24] D E3U44_04070 hypothetical protein K09733 mfnB; (5-formylfuran-3-yl)methyl phosphate synthase [EC:4.2.3.153] D E3U44_04635 amino acid kinase K07144 mfnE; 5-(aminomethyl)-3-furanmethanol phosphate kinase [EC:2.7.4.31] D E3U44_04645 S-layer protein K07072 mfnF; (4-(4-[2-(gamma-L-glutamylamino)ethyl]phenoxymethyl)furan-2-yl)methanamine synthase [EC:2.5.1.131] C 00910 Nitrogen metabolism [PATH:nwr00910] D E3U44_05500 nirK; nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D E3U44_15670 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D E3U44_15675 cytochrome c K02305 norC; nitric oxide reductase subunit C D E3U44_00915 methane monooxygenase/ammonia monooxygenase subunit A K10944 pmoA-amoA; methane/ammonia monooxygenase subunit A [EC:1.14.18.3 1.14.99.39] D E3U44_00910 methane monooxygenase/ammonia monooxygenase subunit B K10945 pmoB-amoB; methane/ammonia monooxygenase subunit B D E3U44_00920 methane monooxygenase/ammonia monooxygenase subunit C K10946 pmoC-amoC; methane/ammonia monooxygenase subunit C D E3U44_17775 hydroxylamine reductase K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6] D E3U44_06290 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D E3U44_06215 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D E3U44_11450 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D E3U44_01445 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3U44_14105 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D E3U44_14100 gltB; glutamate synthase large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] D E3U44_17015 hypothetical protein K01725 cynS; cyanate lyase [EC:4.2.1.104] D E3U44_15880 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D E3U44_08825 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D E3U44_13215 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D E3U44_13585 sulfate transporter K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D E3U44_07955 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] D E3U44_04510 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] D E3U44_14365 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:nwr00920] D E3U44_09345 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D E3U44_09340 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D E3U44_00815 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D E3U44_08725 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D E3U44_09335 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D E3U44_16875 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D E3U44_16870 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D E3U44_03420 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D E3U44_13645 MBL fold metallo-hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D E3U44_03275 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D E3U44_10380 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D E3U44_13045 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D E3U44_06790 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D E3U44_15795 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D E3U44_14250 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:nwr00061] D E3U44_10495 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D E3U44_02300 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D E3U44_02305 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D E3U44_13850 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D E3U44_13520 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D E3U44_13510 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D E3U44_13505 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D E3U44_10885 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D E3U44_13525 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E3U44_07105 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_13515 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_16355 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_11210 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D E3U44_09555 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D E3U44_00365 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D E3U44_09605 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E3U44_13320 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:nwr00071] D E3U44_09615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09675 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_14705 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D E3U44_09610 crotonase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14700 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14710 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D E3U44_09605 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E3U44_13320 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E3U44_08830 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:nwr00561] D E3U44_11125 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_14515 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D E3U44_13500 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D E3U44_03955 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D E3U44_05615 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D E3U44_08810 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D E3U44_02835 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D E3U44_10035 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D E3U44_00960 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D E3U44_16725 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] C 00564 Glycerophospholipid metabolism [PATH:nwr00564] D E3U44_03980 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D E3U44_07695 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D E3U44_14520 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D E3U44_03955 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D E3U44_05615 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D E3U44_08810 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D E3U44_02835 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D E3U44_14995 hypothetical protein K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D E3U44_14550 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D E3U44_15970 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D E3U44_08830 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D E3U44_17640 methyltransferase domain-containing protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D E3U44_09530 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D E3U44_17275 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D E3U44_00995 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D E3U44_06410 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D E3U44_06270 CDP-alcohol phosphatidyltransferase family protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D E3U44_13350 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D E3U44_09490 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D E3U44_13105 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D E3U44_13000 phospholipase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D E3U44_05510 hypothetical protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D E3U44_18820 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism D E3U44_14995 hypothetical protein K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:nwr00592] D E3U44_14705 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:nwr01040] D E3U44_01400 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D E3U44_05130 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D E3U44_10075 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D E3U44_14165 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D E3U44_09600 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:nwr00230] D E3U44_00970 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D E3U44_08720 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D E3U44_14630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3U44_03390 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D E3U44_12785 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D E3U44_04300 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D E3U44_13485 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D E3U44_06880 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D E3U44_18835 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D E3U44_14015 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D E3U44_18830 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D E3U44_12540 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D E3U44_12545 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D E3U44_01020 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D E3U44_11245 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D E3U44_02320 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D E3U44_10255 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D E3U44_11115 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D E3U44_14140 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D E3U44_09405 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D E3U44_07395 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D E3U44_11490 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D E3U44_03160 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D E3U44_17745 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D E3U44_00610 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D E3U44_14955 NUDIX domain-containing protein K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D E3U44_03155 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D E3U44_16215 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D E3U44_00530 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D E3U44_01045 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D E3U44_01050 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D E3U44_15040 hypothetical protein K00524 nrdJ; ribonucleotide reductase, class II [EC:1.17.4.2] D E3U44_00520 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D E3U44_08770 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D E3U44_16910 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D E3U44_12120 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D E3U44_02325 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D E3U44_03045 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D E3U44_02840 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20] D E3U44_01955 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D E3U44_10385 cpdA; 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D E3U44_13195 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D E3U44_00815 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D E3U44_09345 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D E3U44_09340 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D E3U44_15880 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:nwr00240] D E3U44_02970 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D E3U44_02975 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D E3U44_08455 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D E3U44_05560 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D E3U44_01015 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D E3U44_05555 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D E3U44_06905 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D E3U44_05550 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D E3U44_03370 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D E3U44_08975 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D E3U44_09515 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D E3U44_17745 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D E3U44_01485 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D E3U44_14955 NUDIX domain-containing protein K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D E3U44_10505 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D E3U44_10310 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D E3U44_11115 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D E3U44_14140 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D E3U44_09405 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D E3U44_05565 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D E3U44_15040 hypothetical protein K00524 nrdJ; ribonucleotide reductase, class II [EC:1.17.4.2] D E3U44_18840 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D E3U44_01045 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D E3U44_01050 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D E3U44_13540 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D E3U44_03395 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D E3U44_04530 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D E3U44_08470 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:nwr00250] D E3U44_14325 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3U44_00735 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D E3U44_17935 peptidase T K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D E3U44_07720 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3U44_08155 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3U44_08445 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3U44_00790 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3U44_01125 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3U44_11130 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D E3U44_07050 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D E3U44_11235 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D E3U44_04230 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D E3U44_03045 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D E3U44_11245 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D E3U44_08455 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D E3U44_05560 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D E3U44_05645 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D E3U44_14105 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D E3U44_06290 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D E3U44_06215 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D E3U44_11450 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D E3U44_16075 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D E3U44_01445 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3U44_02970 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D E3U44_02975 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D E3U44_04200 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D E3U44_13485 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:nwr00260] D E3U44_13825 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3U44_17580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3U44_13880 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E3U44_00670 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D E3U44_00665 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D E3U44_03310 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D E3U44_06760 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D E3U44_11340 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E3U44_11130 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D E3U44_11310 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D E3U44_16465 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D E3U44_04000 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E3U44_15175 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D E3U44_11125 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D E3U44_10280 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E3U44_10275 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D E3U44_00925 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D E3U44_17695 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D E3U44_02830 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D E3U44_04225 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D E3U44_11640 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11230 FAD-binding protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_03625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_17700 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D E3U44_17275 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D E3U44_00995 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D E3U44_01525 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D E3U44_02410 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D E3U44_13855 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D E3U44_13860 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D E3U44_10640 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D E3U44_10645 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D E3U44_13830 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] D E3U44_10635 thpD; ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55] C 00270 Cysteine and methionine metabolism [PATH:nwr00270] D E3U44_13045 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D E3U44_06790 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D E3U44_09905 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D E3U44_17080 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D E3U44_01585 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D E3U44_16290 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D E3U44_18890 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D E3U44_07355 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D E3U44_16815 purine phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D E3U44_07395 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D E3U44_09310 TRZ/ATZ family hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D E3U44_11495 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D E3U44_09320 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D E3U44_00595 methylthioribulose 1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D E3U44_00585 mtnC; acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D E3U44_00590 cupin domain-containing protein K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D E3U44_10465 PLP-dependent transferase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D E3U44_10715 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E3U44_01590 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D E3U44_13825 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3U44_17580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3U44_13880 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E3U44_00670 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D E3U44_15795 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D E3U44_14250 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D E3U44_05260 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3U44_14085 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D E3U44_05585 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D E3U44_14325 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3U44_03275 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D E3U44_10380 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D E3U44_06050 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D E3U44_09450 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D E3U44_10280 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E3U44_10275 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:nwr00280] D E3U44_05260 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3U44_17225 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D E3U44_17230 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D E3U44_17235 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D E3U44_17240 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D E3U44_11640 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11230 FAD-binding protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_03625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_09610 crotonase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14700 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14705 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D E3U44_11710 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_09680 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D E3U44_09685 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D E3U44_09690 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D E3U44_09730 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D E3U44_09615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09675 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:nwr00290] D E3U44_01525 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D E3U44_02410 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D E3U44_05900 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D E3U44_13890 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D E3U44_13885 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D E3U44_16255 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3U44_01010 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3U44_01005 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D E3U44_01000 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D E3U44_07975 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D E3U44_05260 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3U44_17225 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D E3U44_00990 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:nwr00300] D E3U44_00670 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D E3U44_13825 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3U44_17580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3U44_13880 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E3U44_01030 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D E3U44_06955 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D E3U44_11145 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D E3U44_08665 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D E3U44_11150 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D E3U44_11140 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D E3U44_04840 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D E3U44_04830 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D E3U44_02050 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D E3U44_02045 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:nwr00310] D E3U44_16100 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D E3U44_03630 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D E3U44_11640 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11230 FAD-binding protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_03625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_09610 crotonase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14700 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_09615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09675 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_05645 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D E3U44_01320 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:nwr00220] D E3U44_08660 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D E3U44_11235 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D E3U44_04230 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D E3U44_16110 arginase K01476 rocF; arginase [EC:3.5.3.1] D E3U44_01445 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3U44_02970 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D E3U44_02975 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D E3U44_15880 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D E3U44_06290 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D E3U44_06215 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D E3U44_11450 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D E3U44_14325 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3U44_07905 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D E3U44_01970 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D E3U44_03385 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D E3U44_02330 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D E3U44_08665 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D E3U44_06755 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:nwr00330] D E3U44_07350 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D E3U44_00645 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D E3U44_07355 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D E3U44_18890 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_16110 arginase K01476 rocF; arginase [EC:3.5.3.1] D E3U44_16105 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D E3U44_03350 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D E3U44_16075 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D E3U44_03730 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D E3U44_01505 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D E3U44_01270 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D E3U44_14325 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3U44_01320 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:nwr00340] D E3U44_06180 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D E3U44_03050 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D E3U44_03850 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D E3U44_03845 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D E3U44_03835 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D E3U44_04655 nickel transporter K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D E3U44_03830 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D E3U44_03840 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D E3U44_03825 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D E3U44_10290 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3U44_06190 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3U44_06185 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_11335 egtD; L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:nwr00350] D E3U44_14325 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3U44_10290 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3U44_06190 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3U44_17210 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D E3U44_17205 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D E3U44_17195 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D E3U44_17200 FAA hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D E3U44_06265 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D E3U44_05645 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:nwr00360] D E3U44_06265 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D E3U44_14325 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3U44_10290 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3U44_06190 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3U44_17210 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D E3U44_01320 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00380 Tryptophan metabolism [PATH:nwr00380] D E3U44_17220 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D E3U44_17215 aminotransferase class V-fold PLP-dependent enzyme K01556 KYNU; kynureninase [EC:3.7.1.3] D E3U44_03630 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D E3U44_11640 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11230 FAD-binding protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_03625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_09610 crotonase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14700 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_09615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09675 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_06265 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_18575 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:nwr00400] D E3U44_10240 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D E3U44_13595 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D E3U44_04630 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D E3U44_02295 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D E3U44_02985 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D E3U44_04625 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D E3U44_10300 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D E3U44_05915 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D E3U44_00875 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D E3U44_00880 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D E3U44_00885 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D E3U44_13865 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D E3U44_00890 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D E3U44_13855 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D E3U44_13860 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D E3U44_10285 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D E3U44_10295 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D E3U44_14325 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3U44_10290 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3U44_06190 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3U44_11135 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:nwr00410] D E3U44_17815 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_17820 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D E3U44_08470 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D E3U44_09610 crotonase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14700 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00430 Taurine and hypotaurine metabolism [PATH:nwr00430] D E3U44_08395 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3U44_07050 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D E3U44_06290 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D E3U44_13400 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:nwr00440] D E3U44_16825 aepX; phosphoenolpyruvate mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D E3U44_16830 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] D E3U44_16835 2-aminoethylphosphonate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] C 00450 Selenocompound metabolism [PATH:nwr00450] D E3U44_09905 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D E3U44_17080 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D E3U44_10465 PLP-dependent transferase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D E3U44_00840 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D E3U44_07045 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D E3U44_09345 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D E3U44_09340 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D E3U44_11080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:nwr00460] D E3U44_08395 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3U44_17935 peptidase T K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D E3U44_11340 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:nwr00470] D E3U44_06600 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D E3U44_01320 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D E3U44_02425 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3U44_02010 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3U44_02035 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D E3U44_04840 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D E3U44_04830 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:nwr00480] D E3U44_08395 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3U44_06370 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] D E3U44_16420 YbdK family carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D E3U44_14085 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D E3U44_05585 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D E3U44_14035 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D E3U44_16845 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D E3U44_14070 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D E3U44_09910 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D E3U44_11440 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D E3U44_08420 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D E3U44_11655 hypothetical protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D E3U44_07355 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:nwr00540] D E3U44_09560 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D E3U44_17150 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D E3U44_01990 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D E3U44_06620 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D E3U44_18430 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D E3U44_17155 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D E3U44_01575 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D E3U44_06130 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D E3U44_10510 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D E3U44_06125 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D E3U44_07085 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D E3U44_06690 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D E3U44_12895 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D E3U44_02110 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D E3U44_16485 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D E3U44_06700 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D E3U44_05610 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D E3U44_06695 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D E3U44_07370 lipopolysaccharide heptosyltransferase family protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D E3U44_15355 glycosyltransferase family 9 protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D E3U44_07390 glycosyltransferase family 9 protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] C 00542 O-Antigen repeat unit biosynthesis [PATH:nwr00542] D E3U44_16650 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:nwr00541] D E3U44_09390 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E3U44_09070 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E3U44_16705 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E3U44_07895 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D E3U44_01380 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D E3U44_08430 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D E3U44_08425 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D E3U44_08435 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D E3U44_08440 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D E3U44_15405 NAD-dependent epimerase/dehydratase family protein K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10] D E3U44_00820 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D E3U44_16600 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D E3U44_16595 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D E3U44_04195 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D E3U44_08130 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D E3U44_01375 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:nwr00550] D E3U44_06175 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D E3U44_02015 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D E3U44_02020 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D E3U44_02035 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D E3U44_02050 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D E3U44_02425 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3U44_02010 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3U44_02045 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D E3U44_09525 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D E3U44_06845 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D E3U44_17360 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D E3U44_07425 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D E3U44_02040 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D E3U44_02025 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D E3U44_04595 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D E3U44_01345 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D E3U44_02055 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D E3U44_01325 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:nwr00552] D E3U44_06845 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D E3U44_17360 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D E3U44_07425 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D E3U44_16650 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D E3U44_07635 glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D E3U44_10035 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:nwr00543] D E3U44_16650 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D E3U44_07630 glycosyltransferase family 2 protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D E3U44_13045 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D E3U44_11930 polysaccharide pyruvyl transferase family protein K13665 gumL; pyruvyltransferase B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:nwr00730] D E3U44_06875 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D E3U44_16270 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D E3U44_13055 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3U44_18515 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D E3U44_17100 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D E3U44_13700 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D E3U44_03215 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D E3U44_09485 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D E3U44_01955 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:nwr00740] D E3U44_11360 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D E3U44_11350 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D E3U44_14800 RibD family protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D E3U44_11725 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D E3U44_09475 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D E3U44_11355 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D E3U44_11305 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D E3U44_00970 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D E3U44_09035 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:nwr00750] D E3U44_03620 hypothetical protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D E3U44_10275 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D E3U44_14655 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D E3U44_09440 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D E3U44_00665 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:nwr00760] D E3U44_00735 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D E3U44_04775 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D E3U44_10550 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D E3U44_12940 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D E3U44_11115 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D E3U44_14140 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D E3U44_09405 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D E3U44_01500 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D E3U44_00460 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D E3U44_17605 pncC; nicotinamide-nucleotide amidase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D E3U44_15130 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D E3U44_18800 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D E3U44_04705 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D E3U44_04700 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D E3U44_05645 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:nwr00770] D E3U44_16255 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3U44_01010 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3U44_01005 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D E3U44_01000 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D E3U44_07975 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D E3U44_17825 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D E3U44_17820 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D E3U44_10365 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D E3U44_03400 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D E3U44_08380 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D E3U44_04805 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D E3U44_09445 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D E3U44_05260 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3U44_08470 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D E3U44_17815 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:nwr00780] D E3U44_00475 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D E3U44_10885 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D E3U44_13525 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E3U44_07105 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_13515 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_16355 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_09555 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D E3U44_00365 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D E3U44_00480 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D E3U44_00485 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D E3U44_07465 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D E3U44_00470 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D E3U44_00490 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D E3U44_10360 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:nwr00785] D E3U44_01315 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D E3U44_01310 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D E3U44_11640 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11230 FAD-binding protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_03625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11630 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D E3U44_14380 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3U44_11220 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3U44_14375 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3U44_11225 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3U44_14370 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D E3U44_11635 biotin/lipoyl-binding protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D E3U44_03635 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D E3U44_03630 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D E3U44_17230 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D E3U44_17235 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D E3U44_17240 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D E3U44_17695 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D E3U44_02830 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D E3U44_04225 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D E3U44_17700 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:nwr00790] D E3U44_16335 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D E3U44_11285 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D E3U44_14585 alkaline phosphatase family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D E3U44_03960 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D E3U44_03965 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D E3U44_17830 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D E3U44_02950 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D E3U44_04535 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D E3U44_13845 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D E3U44_11360 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D E3U44_04640 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D E3U44_13530 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D E3U44_11290 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D E3U44_02440 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D E3U44_04030 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D E3U44_05320 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D E3U44_05325 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D E3U44_16025 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D E3U44_04690 beta-hydroxylase K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D E3U44_04670 RimK family alpha-L-glutamate ligase K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33] D E3U44_16080 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D E3U44_01615 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D E3U44_01605 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D E3U44_06480 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D E3U44_09580 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:nwr00670] D E3U44_04535 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D E3U44_18410 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D E3U44_04695 methylenetetrahydrofolate dehydrogenase K00300 mtdA; methylenetetrahydrofolate/methylenetetrahydromethanopterin dehydrogenase (NADP+) [EC:1.5.1.5 1.5.1.-] D E3U44_11340 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E3U44_18835 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D E3U44_02320 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D E3U44_03495 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D E3U44_08200 formyl transferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D E3U44_04225 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D E3U44_09905 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D E3U44_04530 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D E3U44_01595 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:nwr00860] D E3U44_04720 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3U44_04275 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D E3U44_03230 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D E3U44_02980 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D E3U44_04235 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D E3U44_03460 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D E3U44_06895 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D E3U44_15260 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D E3U44_06615 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D E3U44_17945 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D E3U44_04245 hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D E3U44_10545 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D E3U44_03760 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D E3U44_03765 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D E3U44_10560 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D E3U44_17970 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D E3U44_12575 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D E3U44_16085 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:nwr00130] D E3U44_11135 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] D E3U44_00505 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D E3U44_02180 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D E3U44_09035 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D E3U44_03020 ubiquinone biosynthesis protein UbiH K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D E3U44_09305 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D E3U44_03015 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D E3U44_02470 methyltransferase domain-containing protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D E3U44_09050 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D E3U44_18955 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D E3U44_10355 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D E3U44_17210 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:nwr00900] D E3U44_17100 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D E3U44_09535 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D E3U44_10525 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D E3U44_04290 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D E3U44_10530 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D E3U44_17135 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D E3U44_17105 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D E3U44_09615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09675 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09035 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D E3U44_11295 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D E3U44_03710 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D E3U44_09525 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D E3U44_07030 M48 family peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:nwr00909] D E3U44_16810 shc; squalene--hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129] C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:nwr00906] D E3U44_02355 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D E3U44_16805 squalene/phytoene synthase family protein K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:nwr00907] D E3U44_09610 crotonase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14700 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_09690 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D E3U44_14705 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D E3U44_15140 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D E3U44_06960 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:nwr00523] D E3U44_08430 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D E3U44_08425 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D E3U44_08435 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D E3U44_08440 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D E3U44_15410 SDR family NAD(P)-dependent oxidoreductase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D E3U44_12395 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] C 01055 Biosynthesis of vancomycin group antibiotics D E3U44_08425 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:nwr00332] D E3U44_03730 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D E3U44_01505 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:nwr00261] D E3U44_12365 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein D E3U44_09345 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D E3U44_09340 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D E3U44_13825 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3U44_17580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3U44_13880 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E3U44_01030 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D E3U44_06955 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:nwr00521] D E3U44_13185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D E3U44_14630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3U44_03390 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D E3U44_06275 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D E3U44_17060 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D E3U44_01235 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D E3U44_08430 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D E3U44_08425 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D E3U44_08435 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D E3U44_08440 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D E3U44_13185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:nwr00525] D E3U44_08430 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D E3U44_08425 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:nwr00401] D E3U44_10295 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D E3U44_14325 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3U44_10290 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3U44_06190 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D E3U44_00875 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D E3U44_00880 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D E3U44_13510 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D E3U44_07105 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_13515 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_16355 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_00365 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:nwr00998] D E3U44_13520 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D E3U44_16825 aepX; phosphoenolpyruvate mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D E3U44_16830 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] C 00999 Biosynthesis of various plant secondary metabolites [PATH:nwr00999] D E3U44_01585 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D E3U44_16290 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D E3U44_02985 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites D E3U44_12380 N-acetyltransferase K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:nwr00362] D E3U44_14705 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D E3U44_13295 hypothetical protein K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D E3U44_09610 crotonase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14700 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_09615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09675 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:nwr00627] D E3U44_17810 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D E3U44_09035 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:nwr00625] D E3U44_13005 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D E3U44_06765 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D E3U44_14705 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:nwr00643] D E3U44_17205 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D E3U44_17195 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D E3U44_17200 FAA hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:nwr00930] D E3U44_09610 crotonase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D E3U44_14700 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation D E3U44_13295 hypothetical protein K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:nwr03020] D E3U44_09130 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D E3U44_09135 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D E3U44_09290 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D E3U44_00525 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:nwr03010] D E3U44_10315 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D E3U44_09505 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D E3U44_09195 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D E3U44_09285 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D E3U44_09250 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D E3U44_06580 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D E3U44_09145 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D E3U44_09235 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D E3U44_06835 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D E3U44_09160 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D E3U44_09280 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D E3U44_09140 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D E3U44_09275 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D E3U44_09230 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D E3U44_11190 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D E3U44_18470 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D E3U44_09210 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D E3U44_06585 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D E3U44_09185 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D E3U44_03750 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D E3U44_03945 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D E3U44_09115 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D E3U44_09180 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D E3U44_09165 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D E3U44_09170 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D E3U44_09225 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D E3U44_09240 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D E3U44_09125 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D E3U44_06590 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D E3U44_09120 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D E3U44_09110 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D E3U44_06840 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D E3U44_09215 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D E3U44_09260 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D E3U44_09200 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D E3U44_09295 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D E3U44_09245 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D E3U44_18455 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D E3U44_14295 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D E3U44_03715 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D E3U44_09190 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D E3U44_09175 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D E3U44_09220 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D E3U44_04305 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D E3U44_03720 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D E3U44_01390 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D E3U44_09205 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D E3U44_09255 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D E3U44_04580 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D E3U44_13495 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D E3U44_01395 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D E3U44_04110 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D E3U44_14300 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D E3U44_09270 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D E3U44_17675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D E3U44_12985 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D E3U44_12990 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:nwr00970] D E3U44_01635 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3U44_14670 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3U44_17665 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3U44_17565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3U44_18400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3U44_07990 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3U44_01775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3U44_14330 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D E3U44_00380 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D E3U44_13360 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D E3U44_04295 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D E3U44_06830 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D E3U44_14675 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E3U44_17840 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E3U44_14220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3U44_13355 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3U44_09080 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3U44_18395 tRNA-His K14226 tRNA-His; tRNA His D E3U44_17670 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3U44_13450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3U44_02930 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3U44_13030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3U44_06395 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3U44_18390 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E3U44_05330 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E3U44_11160 tRNA-Met K14230 tRNA-Met; tRNA Met D E3U44_03925 tRNA-Met K14230 tRNA-Met; tRNA Met D E3U44_04320 tRNA-Met K14230 tRNA-Met; tRNA Met D E3U44_05220 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D E3U44_14270 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E3U44_03705 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E3U44_18405 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E3U44_13075 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3U44_17570 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3U44_03085 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3U44_07315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3U44_10370 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3U44_14000 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3U44_09085 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3U44_09095 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D E3U44_09075 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D E3U44_14315 tRNA-Val K14237 tRNA-Val; tRNA Val D E3U44_00385 tRNA-Val K14237 tRNA-Val; tRNA Val D E3U44_08645 tRNA-Val K14237 tRNA-Val; tRNA Val D E3U44_04720 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3U44_18420 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D E3U44_01370 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D E3U44_07900 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D E3U44_01365 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D E3U44_17585 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D E3U44_04770 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E3U44_05600 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D E3U44_05605 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D E3U44_14310 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D E3U44_02385 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D E3U44_18415 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D E3U44_11080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D E3U44_03495 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D E3U44_08200 formyl transferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D E3U44_14730 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D E3U44_01520 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E3U44_18560 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D E3U44_09430 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D E3U44_04020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E3U44_17750 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D E3U44_17725 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D E3U44_14290 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D E3U44_14285 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D E3U44_17680 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E3U44_02375 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:nwr03060] D E3U44_09265 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E3U44_09100 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E3U44_02935 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E3U44_09010 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D E3U44_07140 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E3U44_09015 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E3U44_09005 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3U44_18845 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3U44_04120 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E3U44_01975 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E3U44_03985 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3U44_18475 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D E3U44_03090 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D E3U44_08360 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E3U44_08620 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D E3U44_03860 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D E3U44_08625 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D E3U44_03865 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D E3U44_03870 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D E3U44_00700 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D E3U44_18550 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:nwr04122] D E3U44_13055 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3U44_03275 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D E3U44_10380 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D E3U44_06675 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D E3U44_01450 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D E3U44_11280 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D E3U44_01455 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D E3U44_01605 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D E3U44_16080 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D E3U44_01610 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D E3U44_05735 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D E3U44_16265 moeB; molybdopterin-synthase adenylyltransferase MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D E3U44_08055 thiamine biosynthesis protein ThiF K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D E3U44_01615 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D E3U44_06480 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D E3U44_13695 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D E3U44_05740 M67 family peptidase K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6] C 03050 Proteasome C 03018 RNA degradation [PATH:nwr03018] D E3U44_07875 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D E3U44_07880 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D E3U44_07070 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D E3U44_03025 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D E3U44_10515 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E3U44_11195 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D E3U44_06400 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D E3U44_06710 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D E3U44_03080 transcription termination factor Rho K03628 rho; transcription termination factor Rho D E3U44_04330 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK D E3U44_06945 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E3U44_05235 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3U44_17875 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3U44_03070 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D E3U44_08780 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D E3U44_17835 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:nwr03030] D E3U44_06930 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D E3U44_10485 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E3U44_03095 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E3U44_13545 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E3U44_01510 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E3U44_14040 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D E3U44_04100 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E3U44_06595 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D E3U44_03935 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D E3U44_03535 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3U44_06925 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D E3U44_11365 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D E3U44_07335 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3U44_16010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:nwr03410] D E3U44_11045 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D E3U44_18505 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D E3U44_05045 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D E3U44_14090 hypothetical protein K11687 ADPRHL2; poly(ADP-ribose) glycohydrolase ARH3 [EC:3.2.1.143] D E3U44_01430 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D E3U44_00985 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D E3U44_14765 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D E3U44_02190 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D E3U44_07335 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3U44_18805 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E3U44_16010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:nwr03420] D E3U44_13625 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D E3U44_03525 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D E3U44_05050 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D E3U44_14320 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D E3U44_13345 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D E3U44_03240 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D E3U44_07335 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3U44_16010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D E3U44_08715 nuclease K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] C 03430 Mismatch repair [PATH:nwr03430] D E3U44_12605 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D E3U44_17610 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D E3U44_16435 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D E3U44_12610 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D E3U44_07000 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D E3U44_06865 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D E3U44_03240 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D E3U44_03165 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D E3U44_11300 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D E3U44_18805 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E3U44_03535 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3U44_10485 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E3U44_04100 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E3U44_03095 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E3U44_01510 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E3U44_13545 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E3U44_06930 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D E3U44_14040 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D E3U44_16010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D E3U44_19045 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_19135 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_00085 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_07040 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:nwr03440] D E3U44_18805 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E3U44_03535 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3U44_04095 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D E3U44_09435 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D E3U44_03105 recR; recombination protein RecR K06187 recR; recombination protein RecR D E3U44_17595 recA; recombinase RecA K03553 recA; recombination protein RecA D E3U44_07335 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3U44_05275 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D E3U44_05280 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D E3U44_15935 AAA family ATPase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D E3U44_05270 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D E3U44_00510 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D E3U44_00550 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D E3U44_12855 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D E3U44_10485 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E3U44_04100 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E3U44_03095 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E3U44_01510 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E3U44_13545 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E3U44_06930 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D E3U44_14040 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D E3U44_04015 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:nwr02010] D E3U44_10845 extracellular solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein D E3U44_01925 ABC transporter permease subunit K05773 tupB; tungstate transport system permease protein D E3U44_01930 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D E3U44_10025 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D E3U44_10020 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D E3U44_15060 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D E3U44_15045 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D E3U44_15050 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D E3U44_15055 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D E3U44_17120 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3U44_00465 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3U44_06155 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3U44_06165 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3U44_02140 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D E3U44_06150 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D E3U44_02130 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D E3U44_06145 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D E3U44_06160 anti-sigma factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D E3U44_02135 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D E3U44_06140 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D E3U44_08745 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D E3U44_12875 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D E3U44_08750 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D E3U44_12870 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D E3U44_08755 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D E3U44_12865 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D E3U44_08760 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D E3U44_12860 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D E3U44_08695 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D E3U44_08705 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D E3U44_08700 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D E3U44_10125 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3U44_02670 phosphate ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3U44_02785 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3U44_08205 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3U44_02665 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3U44_02780 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3U44_08210 ATP-binding cassette domain-containing protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3U44_10130 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3U44_01540 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D E3U44_01545 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D E3U44_18920 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D E3U44_18915 heme ABC transporter permease K02195 ccmC; heme exporter protein C D E3U44_18910 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D E3U44_18905 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D E3U44_14030 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D E3U44_14025 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D E3U44_06110 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D E3U44_01570 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D E3U44_12360 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:nwr02060] D E3U44_11745 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D E3U44_12330 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D E3U44_06070 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D E3U44_06075 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D E3U44_06080 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D E3U44_17890 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D E3U44_06095 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:nwr03070] D E3U44_06685 type I secretion protein TolC K12340 tolC; outer membrane protein D E3U44_02700 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D E3U44_06420 type II secretion system F family protein K02455 gspF; general secretion pathway protein F D E3U44_06425 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D E3U44_06430 gspH; type II secretion system protein GspH K02457 gspH; general secretion pathway protein H D E3U44_06435 type II secretion system protein K02458 gspI; general secretion pathway protein I D E3U44_02725 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D E3U44_02720 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D E3U44_02715 twitching motility protein PilT K02461 gspL; general secretion pathway protein L D E3U44_02710 general secretion pathway protein K02462 gspM; general secretion pathway protein M D E3U44_06415 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D E3U44_09010 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D E3U44_07140 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E3U44_09015 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E3U44_09100 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E3U44_02935 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E3U44_09265 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E3U44_09005 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3U44_18845 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3U44_04120 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E3U44_01975 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E3U44_08360 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E3U44_03985 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3U44_18475 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D E3U44_08620 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D E3U44_03860 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D E3U44_08625 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D E3U44_03865 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D E3U44_03870 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:nwr02020] D E3U44_08740 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D E3U44_08735 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D E3U44_14585 alkaline phosphatase family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D E3U44_08745 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D E3U44_12875 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D E3U44_12975 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_17430 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_00710 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_11985 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D E3U44_11990 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein D E3U44_08900 flagellin K02406 fliC; flagellin D E3U44_02530 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D E3U44_02525 flagellar motor protein K02556 motA; chemotaxis protein MotA D E3U44_10400 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D E3U44_03765 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D E3U44_04105 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D E3U44_04665 triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D E3U44_18355 carbon storage regulator K03563 csrA; carbon storage regulator D E3U44_17575 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D E3U44_16185 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D E3U44_16170 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D E3U44_16165 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D E3U44_16140 pilus assembly protein CpaF K02282 cpaE; pilus assembly protein CpaE D E3U44_16135 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D E3U44_16130 secretion system protein K12510 tadB; tight adherence protein B D E3U44_16125 type II secretion system F family protein K12511 tadC; tight adherence protein C D E3U44_09495 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D E3U44_01255 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D E3U44_01445 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3U44_03510 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D E3U44_03515 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D E3U44_06455 sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D E3U44_09615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09675 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_01220 ATPase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D E3U44_01215 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D E3U44_06105 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D E3U44_01160 pilin K02650 pilA; type IV pilus assembly protein PilA D E3U44_08480 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D E3U44_08490 response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D E3U44_07125 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D E3U44_15800 response regulator K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D E3U44_07120 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D E3U44_07490 chemotaxis protein CheR K02661 pilK; type IV pilus assembly protein PilK D E3U44_07495 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D E3U44_07500 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D E3U44_07485 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D E3U44_07510 response regulator K02657 pilG; twitching motility two-component system response regulator PilG D E3U44_07505 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D E3U44_07480 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D E3U44_07475 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC D E3U44_16060 response regulator K11355 rcp1; two-component system, chemotaxis family, response regulator Rcp1 D E3U44_12075 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_00625 GHKL domain-containing protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_00660 response regulator K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_03565 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_16045 response regulator transcription factor K14987 fixJ; two-component system, LuxR family, response regulator FixJ D E3U44_08930 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D E3U44_08935 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D E3U44_06730 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D E3U44_18875 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D E3U44_02225 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D E3U44_04755 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D E3U44_04750 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D E3U44_04745 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D E3U44_14395 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D E3U44_14390 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D E3U44_06685 type I secretion protein TolC K12340 tolC; outer membrane protein D E3U44_08110 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D E3U44_07535 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D E3U44_16590 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D E3U44_07075 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D E3U44_08130 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D E3U44_14615 hypothetical protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D E3U44_01625 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:nwr04148] D E3U44_16110 arginase K01476 rocF; arginase [EC:3.5.3.1] D E3U44_04755 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:nwr02024] D E3U44_03070 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D E3U44_00875 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D E3U44_00880 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D E3U44_02645 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D E3U44_10240 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D E3U44_08480 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D E3U44_08490 response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D E3U44_09605 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E3U44_13320 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E3U44_06730 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D E3U44_18875 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D E3U44_02225 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D E3U44_08690 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D E3U44_11350 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D E3U44_14800 RibD family protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D E3U44_00155 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D E3U44_05170 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D E3U44_13200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D E3U44_00360 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D E3U44_11465 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D E3U44_00135 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D E3U44_05165 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D E3U44_11470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D E3U44_00130 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D E3U44_05160 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D E3U44_00120 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D E3U44_04120 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E3U44_19000 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D E3U44_19090 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D E3U44_00040 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D E3U44_09100 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E3U44_02935 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E3U44_09265 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E3U44_09005 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3U44_18845 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3U44_01975 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E3U44_08360 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E3U44_03985 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3U44_18475 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:nwr02030] D E3U44_07120 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D E3U44_15800 response regulator K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D E3U44_07125 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D E3U44_08950 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D E3U44_02580 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D E3U44_02575 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D E3U44_02525 flagellar motor protein K02556 motA; chemotaxis protein MotA D E3U44_10400 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D E3U44_02520 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D E3U44_10405 type VI secretion system protein TssL K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:nwr02040] D E3U44_08940 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D E3U44_08945 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D E3U44_08950 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D E3U44_08955 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D E3U44_08960 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D E3U44_08965 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D E3U44_08970 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D E3U44_02585 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D E3U44_02580 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D E3U44_02575 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D E3U44_02570 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D E3U44_02565 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D E3U44_02560 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D E3U44_02555 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D E3U44_02545 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D E3U44_02550 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D E3U44_01620 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D E3U44_08845 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D E3U44_08850 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D E3U44_08855 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D E3U44_08860 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D E3U44_08865 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D E3U44_08870 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D E3U44_08875 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D E3U44_08880 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D E3U44_08885 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D E3U44_08890 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D E3U44_08895 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D E3U44_08900 flagellin K02406 fliC; flagellin D E3U44_08910 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2 D E3U44_08915 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D E3U44_08920 flagellar protein FliT K02423 fliT; flagellar protein FliT D E3U44_02525 flagellar motor protein K02556 motA; chemotaxis protein MotA D E3U44_10400 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D E3U44_02520 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D E3U44_10405 type VI secretion system protein TssL K02557 motB; chemotaxis protein MotB D E3U44_01625 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D E3U44_01630 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D E3U44_11735 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D E3U44_03930 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D E3U44_08930 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D E3U44_06105 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D E3U44_08935 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D E3U44_02530 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D E3U44_10515 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:nwr04980] D E3U44_10560 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D E3U44_09905 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:nwr01501] D E3U44_03365 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D E3U44_11475 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D E3U44_03665 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D E3U44_03660 multidrug efflux protein K18138 acrB; multidrug efflux pump D E3U44_00155 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D E3U44_06685 type I secretion protein TolC K12340 tolC; outer membrane protein D E3U44_04595 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D E3U44_01345 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D E3U44_02055 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:nwr01502] D E3U44_02425 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3U44_02010 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3U44_06600 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D E3U44_02045 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D E3U44_02040 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D E3U44_02025 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:nwr01503] D E3U44_07005 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E3U44_12975 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_17430 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_00710 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_07320 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D E3U44_03665 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D E3U44_03660 multidrug efflux protein K18138 acrB; multidrug efflux pump D E3U44_06685 type I secretion protein TolC K12340 tolC; outer membrane protein D E3U44_09560 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D E3U44_17150 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:nwr01000] C 01001 Protein kinases [BR:nwr01001] D E3U44_17070 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D E3U44_06295 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D E3U44_16780 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D E3U44_07555 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D E3U44_08120 tyrosine-protein kinase family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D E3U44_08740 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D E3U44_03510 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D E3U44_01220 ATPase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D E3U44_08480 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D E3U44_06460 HAMP domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D E3U44_07485 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D E3U44_12075 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_00625 GHKL domain-containing protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_00660 response regulator K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_03565 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_16790 PAS domain S-box protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:nwr01009] D E3U44_01590 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D E3U44_14625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D E3U44_00925 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:nwr01002] D E3U44_18550 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D E3U44_04810 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D E3U44_16180 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D E3U44_13930 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D E3U44_03155 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D E3U44_13485 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D E3U44_14100 gltB; glutamate synthase large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] D E3U44_04200 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D E3U44_07720 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3U44_08155 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3U44_08445 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3U44_00790 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3U44_01125 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3U44_17390 type 1 glutamine amidotransferase K26818 pfpI; archaeal arginyl aminopeptidase [EC:3.4.11.27] D E3U44_17030 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124] D E3U44_04010 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D E3U44_01245 LysM peptidoglycan-binding domain-containing protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D E3U44_18785 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D E3U44_16205 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D E3U44_16845 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D E3U44_02195 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D E3U44_11720 peptidase M16 K06972 PITRM1; presequence protease [EC:3.4.24.-] D E3U44_08365 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D E3U44_08370 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D E3U44_14035 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D E3U44_11140 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D E3U44_09500 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D E3U44_06750 aminopeptidase P family protein K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D E3U44_03010 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D E3U44_10650 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D E3U44_15120 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D E3U44_02955 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D E3U44_07030 M48 family peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D E3U44_05860 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D E3U44_06670 M48 family peptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D E3U44_09540 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D E3U44_10055 zinc-dependent peptidase K09933 mtfA; MtfA peptidase D E3U44_12975 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_17430 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_00710 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_04220 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-] D E3U44_19000 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D E3U44_19090 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D E3U44_00040 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D E3U44_01325 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E3U44_13460 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D E3U44_01720 brxL; BREX system Lon protease-like protein BrxL K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D E3U44_13470 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D E3U44_16350 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D E3U44_00700 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D E3U44_01270 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D E3U44_12835 alpha/beta hydrolase K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-] D E3U44_04005 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D E3U44_01945 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D E3U44_10470 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D E3U44_12690 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein D E3U44_09065 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D E3U44_17935 peptidase T K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D E3U44_08395 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3U44_05745 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein D E3U44_01460 tldD; metalloprotease TldD K03568 tldD; TldD protein D E3U44_03055 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D E3U44_03060 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:nwr01003] D E3U44_01155 tetratricopeptide repeat protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-] D E3U44_08185 glycosyltransferase family 4 protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D E3U44_10035 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D E3U44_00960 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D E3U44_03650 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D E3U44_08415 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D E3U44_04595 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D E3U44_07635 glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D E3U44_16650 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D E3U44_15190 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D E3U44_07630 glycosyltransferase family 2 protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D E3U44_11625 glycosyltransferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173] D E3U44_04215 sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13] C 01005 Lipopolysaccharide biosynthesis proteins [BR:nwr01005] D E3U44_09560 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D E3U44_17150 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D E3U44_17155 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D E3U44_01990 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D E3U44_06620 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D E3U44_18430 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D E3U44_01575 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D E3U44_06690 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D E3U44_12895 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D E3U44_10510 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D E3U44_07085 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D E3U44_06125 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D E3U44_06130 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D E3U44_07370 lipopolysaccharide heptosyltransferase family protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D E3U44_15355 glycosyltransferase family 9 protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D E3U44_07390 glycosyltransferase family 9 protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D E3U44_02110 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D E3U44_16485 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D E3U44_05610 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D E3U44_06700 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D E3U44_06695 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D E3U44_00780 glycosyltransferase family 4 protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-] D E3U44_02645 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D E3U44_16650 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:nwr01011] D E3U44_06175 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D E3U44_02015 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D E3U44_02020 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D E3U44_02035 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D E3U44_02050 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D E3U44_02425 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3U44_02010 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3U44_06600 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D E3U44_02040 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D E3U44_02025 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D E3U44_06845 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D E3U44_17360 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D E3U44_07425 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D E3U44_03755 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D E3U44_04595 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D E3U44_01345 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D E3U44_02055 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D E3U44_01325 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E3U44_01245 LysM peptidoglycan-binding domain-containing protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D E3U44_01335 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D E3U44_06240 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D E3U44_13535 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D E3U44_01330 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D E3U44_07005 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E3U44_10555 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:nwr01004] D E3U44_13510 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D E3U44_13505 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D E3U44_10885 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D E3U44_13525 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E3U44_07105 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_13515 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_16355 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3U44_11210 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D E3U44_09555 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D E3U44_00365 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D E3U44_10075 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D E3U44_14165 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D E3U44_09600 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D E3U44_01400 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D E3U44_05130 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D E3U44_10585 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D E3U44_09730 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D E3U44_09605 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E3U44_13320 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E3U44_06210 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D E3U44_13500 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D E3U44_03955 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D E3U44_05615 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D E3U44_08810 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:nwr01008] D E3U44_12365 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein D E3U44_12395 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] C 01006 Prenyltransferases [BR:nwr01006] D E3U44_11295 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D E3U44_03710 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D E3U44_09525 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D E3U44_02355 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D E3U44_16805 squalene/phytoene synthase family protein K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96] D E3U44_03075 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D E3U44_00505 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D E3U44_03760 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:nwr01007] D E3U44_04720 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3U44_18420 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D E3U44_17680 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E3U44_02375 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D E3U44_18415 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D E3U44_04020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E3U44_11080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D E3U44_18560 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D E3U44_14730 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D E3U44_01520 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E3U44_09430 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D E3U44_04770 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E3U44_17725 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D E3U44_05600 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D E3U44_05605 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D E3U44_02385 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D E3U44_17750 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D E3U44_14310 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D E3U44_17585 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D E3U44_14290 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D E3U44_14285 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D E3U44_14325 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3U44_00675 alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D E3U44_11150 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D E3U44_10290 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3U44_06190 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3U44_00485 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D E3U44_16105 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D E3U44_08665 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D E3U44_10640 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D E3U44_07465 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D E3U44_03230 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D E3U44_01320 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D E3U44_05260 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3U44_16835 2-aminoethylphosphonate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D E3U44_11130 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D E3U44_10275 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:nwr00194] D E3U44_07195 hypothetical protein K02638 petE; plastocyanin D E3U44_13940 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D E3U44_04190 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D E3U44_13935 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D E3U44_04185 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D E3U44_12950 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D E3U44_04180 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D E3U44_12955 alternate F1F0 ATPase, F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D E3U44_04175 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D E3U44_04170 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D E3U44_12960 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D E3U44_04165 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D E3U44_12965 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D E3U44_04160 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D E3U44_12970 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D E3U44_04155 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D E3U44_13945 ATPase F0F1 K02116 atpI; ATP synthase protein I D E3U44_04150 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:nwr03000] D E3U44_10715 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E3U44_17055 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D E3U44_09325 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D E3U44_12530 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D E3U44_06990 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D E3U44_17780 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D E3U44_03670 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D E3U44_05240 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D E3U44_05730 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D E3U44_18780 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D E3U44_08690 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D E3U44_06730 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D E3U44_18875 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D E3U44_02225 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D E3U44_13050 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D E3U44_14610 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D E3U44_06365 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D E3U44_11375 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D E3U44_05945 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D E3U44_12880 ArsR family transcriptional regulator K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor D E3U44_10360 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D E3U44_02315 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D E3U44_10060 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D E3U44_08930 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D E3U44_09830 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D E3U44_09865 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D E3U44_06825 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D E3U44_16075 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D E3U44_09840 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D E3U44_16955 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D E3U44_01195 ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D E3U44_08785 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D E3U44_04145 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E3U44_00825 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D E3U44_06935 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D E3U44_01035 glycine cleavage system protein R K03567 gcvR; glycine cleavage system transcriptional repressor D E3U44_05565 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D E3U44_18290 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D E3U44_17535 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D E3U44_04355 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D E3U44_18260 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D E3U44_19065 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D E3U44_00105 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D E3U44_05575 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D E3U44_10595 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D E3U44_17850 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D E3U44_11345 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D E3U44_10745 hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D E3U44_02070 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:nwr03021] D E3U44_09290 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D E3U44_09130 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D E3U44_09135 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D E3U44_00525 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D E3U44_11735 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D E3U44_03930 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D E3U44_10330 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D E3U44_16050 sigma-70 family RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D E3U44_00730 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D E3U44_08355 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D E3U44_06105 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D E3U44_02530 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D E3U44_11170 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D E3U44_09480 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D E3U44_09105 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D E3U44_04740 stringent starvation protein A K03599 sspA; stringent starvation protein A D E3U44_04735 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D E3U44_06285 PAS domain S-box protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D E3U44_02200 PAS domain S-box protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D E3U44_17180 FHA domain-containing protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D E3U44_06300 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist D E3U44_06295 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D E3U44_00725 anti-anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA D E3U44_00720 MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB D E3U44_00715 Fis family transcriptional regulator K03803 rseC; sigma-E factor negative regulatory protein RseC D E3U44_10595 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D E3U44_17850 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D E3U44_02965 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D E3U44_03080 transcription termination factor Rho K03628 rho; transcription termination factor Rho D E3U44_02165 hypothetical protein K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:nwr03019] D E3U44_07070 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D E3U44_01480 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D E3U44_00690 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D E3U44_06400 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D E3U44_07025 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D E3U44_03025 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D E3U44_06710 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D E3U44_10515 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E3U44_11195 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D E3U44_03080 transcription termination factor Rho K03628 rho; transcription termination factor Rho D E3U44_04330 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK D E3U44_06945 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E3U44_05235 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3U44_17875 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3U44_03070 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D E3U44_08780 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D E3U44_17835 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D E3U44_07875 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D E3U44_07880 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D E3U44_18355 carbon storage regulator K03563 csrA; carbon storage regulator D E3U44_17575 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D E3U44_06085 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D E3U44_16905 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:nwr03011] D E3U44_10315 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D E3U44_09505 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D E3U44_09195 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D E3U44_09285 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D E3U44_09250 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D E3U44_06580 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D E3U44_09145 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D E3U44_09235 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D E3U44_06835 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D E3U44_09160 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D E3U44_09280 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D E3U44_09140 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D E3U44_09275 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D E3U44_09230 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D E3U44_11190 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D E3U44_18470 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D E3U44_09210 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D E3U44_06585 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D E3U44_09185 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D E3U44_03750 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D E3U44_03945 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D E3U44_09115 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D E3U44_09180 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D E3U44_09165 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D E3U44_09170 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D E3U44_09225 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D E3U44_09240 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D E3U44_06590 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D E3U44_09120 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D E3U44_09110 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D E3U44_09125 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D E3U44_06840 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D E3U44_09215 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D E3U44_09260 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D E3U44_09200 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D E3U44_09295 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D E3U44_09245 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D E3U44_18455 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D E3U44_14295 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D E3U44_03715 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D E3U44_09190 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D E3U44_09175 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D E3U44_09220 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D E3U44_03720 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D E3U44_01390 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D E3U44_09205 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D E3U44_09255 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D E3U44_04580 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D E3U44_13495 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D E3U44_01395 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D E3U44_04110 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D E3U44_14300 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D E3U44_09270 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D E3U44_04305 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D E3U44_12990 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D E3U44_17675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D E3U44_12985 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:nwr03009] D E3U44_00690 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D E3U44_07025 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D E3U44_17920 hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] D E3U44_00685 GTPase Era K03595 era; GTPase D E3U44_03725 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D E3U44_10595 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D E3U44_17850 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D E3U44_11170 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D E3U44_09480 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D E3U44_09105 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D E3U44_14650 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D E3U44_03500 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D E3U44_08375 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D E3U44_07470 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D E3U44_04135 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D E3U44_02065 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D E3U44_02095 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D E3U44_02270 16S rRNA methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D E3U44_06575 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D E3U44_02960 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D E3U44_01490 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D E3U44_14245 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D E3U44_11690 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D E3U44_17740 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D E3U44_09470 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D E3U44_02360 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D E3U44_01940 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D E3U44_02850 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D E3U44_00980 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D E3U44_17900 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D E3U44_18465 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D E3U44_02310 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D E3U44_05895 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D E3U44_07070 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D E3U44_01480 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D E3U44_05570 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D E3U44_06710 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D E3U44_09575 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D E3U44_03065 hflX; GTPase HflX K03665 hflX; GTPase D E3U44_06890 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D E3U44_00520 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D E3U44_11180 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D E3U44_11165 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D E3U44_01495 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D E3U44_04560 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D E3U44_13675 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D E3U44_06100 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D E3U44_04315 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D E3U44_13490 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:nwr03016] D E3U44_17855 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D E3U44_00280 ribonuclease T K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D E3U44_05635 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D E3U44_12750 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D E3U44_12740 archease K24956 ZBTB8OS; protein archease D E3U44_11750 archease K24956 ZBTB8OS; protein archease D E3U44_04720 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3U44_17750 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D E3U44_18560 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D E3U44_01520 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E3U44_11080 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D E3U44_04020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E3U44_09430 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D E3U44_04770 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E3U44_17585 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D E3U44_14310 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D E3U44_02385 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D E3U44_18415 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D E3U44_14730 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D E3U44_17725 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D E3U44_14290 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D E3U44_14285 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D E3U44_17680 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E3U44_02375 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D E3U44_01275 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D E3U44_03855 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D E3U44_13840 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D E3U44_13870 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D E3U44_11185 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D E3U44_10535 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D E3U44_13055 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3U44_06890 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D E3U44_03075 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D E3U44_04125 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D E3U44_04130 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D E3U44_08725 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D E3U44_04115 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D E3U44_02075 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D E3U44_14960 RNA ligase partner protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5] D E3U44_00605 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D E3U44_17600 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D E3U44_15975 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D E3U44_05600 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D E3U44_05605 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D E3U44_18420 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D E3U44_03150 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D E3U44_06220 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D E3U44_04550 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D E3U44_15360 TIGR04290 family methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D E3U44_08305 DUF1698 domain-containing protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D E3U44_18460 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D E3U44_13040 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D E3U44_06900 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D E3U44_11280 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D E3U44_01455 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D E3U44_11685 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D E3U44_06675 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D E3U44_01450 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D E3U44_13060 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D E3U44_00770 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ D E3U44_13035 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D E3U44_05325 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D E3U44_11290 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D E3U44_05320 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D E3U44_16025 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D E3U44_07020 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D E3U44_09000 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D E3U44_10500 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D E3U44_15845 tRNA(Met) cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D E3U44_17625 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D E3U44_03950 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D E3U44_07010 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D E3U44_06400 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D E3U44_11195 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D E3U44_18680 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:nwr03012] D E3U44_11175 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D E3U44_14305 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D E3U44_09965 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D E3U44_09510 elongation factor Ts K02357 tsf; elongation factor Ts D E3U44_09090 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E3U44_09155 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E3U44_09150 fusA; elongation factor G K02355 fusA; elongation factor G D E3U44_04270 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D E3U44_09520 ribosome recycling factor K02838 frr; ribosome recycling factor D E3U44_05655 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D E3U44_04310 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D E3U44_03125 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D E3U44_01295 efp; elongation factor P K02356 efp; elongation factor P D E3U44_01290 genX; EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D E3U44_01300 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D E3U44_09425 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D E3U44_11415 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D E3U44_15900 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:nwr03110] D E3U44_08685 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D E3U44_08815 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D E3U44_13465 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D E3U44_09060 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D E3U44_14625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D E3U44_04330 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK D E3U44_06945 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E3U44_05235 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3U44_17875 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3U44_06950 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D E3U44_13655 J domain-containing protein K05516 cbpA; curved DNA-binding protein D E3U44_03405 djlA; co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein D E3U44_11730 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D E3U44_06940 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D E3U44_01840 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D E3U44_09955 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D E3U44_09960 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D E3U44_14525 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D E3U44_16345 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D E3U44_17455 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D E3U44_17450 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D E3U44_01835 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D E3U44_10570 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D E3U44_05230 co-chaperone GroES K04078 groES; chaperonin GroES D E3U44_17870 co-chaperone GroES K04078 groES; chaperonin GroES D E3U44_12975 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_17430 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_00710 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D E3U44_10650 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D E3U44_15120 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D E3U44_02955 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D E3U44_12970 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D E3U44_04155 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D E3U44_03985 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3U44_16500 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D E3U44_16495 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D E3U44_19000 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D E3U44_19090 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D E3U44_00040 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D E3U44_18425 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D E3U44_00375 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D E3U44_10080 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D E3U44_14760 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D E3U44_02675 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D E3U44_14660 molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D E3U44_03030 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D E3U44_03220 trxA; thioredoxin K05838 ybbN; putative thioredoxin D E3U44_03990 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D E3U44_08675 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D E3U44_07320 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D E3U44_03130 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D E3U44_18435 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D E3U44_02285 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D E3U44_18935 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:nwr04131] D E3U44_14995 hypothetical protein K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D E3U44_17745 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D E3U44_06965 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D E3U44_16465 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D E3U44_12830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3U44_06975 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3U44_14625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D E3U44_07145 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D E3U44_13920 MFS transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:nwr04121] D E3U44_02230 pentapeptide repeat-containing protein K21919 KCTD9; BTB/POZ domain-containing protein KCTD9 C 03051 Proteasome [BR:nwr03051] D E3U44_14625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:nwr03032] D E3U44_06925 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D E3U44_10715 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E3U44_08715 nuclease K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D E3U44_06375 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E3U44_00390 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E3U44_14280 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D E3U44_10320 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D E3U44_04105 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D E3U44_06595 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D E3U44_03935 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D E3U44_03535 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3U44_10485 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E3U44_04100 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E3U44_14040 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D E3U44_01510 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E3U44_13545 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E3U44_06930 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D E3U44_03095 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E3U44_11365 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D E3U44_07335 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3U44_16010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D E3U44_19045 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_19135 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_00085 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_07040 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_18815 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D E3U44_10270 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D E3U44_04090 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D E3U44_09380 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D E3U44_09375 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D E3U44_03470 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:nwr03036] D E3U44_10715 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E3U44_00690 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D E3U44_06375 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E3U44_00390 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E3U44_14280 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D E3U44_10320 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D E3U44_13655 J domain-containing protein K05516 cbpA; curved DNA-binding protein D E3U44_13650 MerR family transcriptional regulator K18997 cbpM; chaperone modulatory protein CbpM D E3U44_04105 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D E3U44_10565 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D E3U44_02315 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D E3U44_03070 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D E3U44_16020 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D E3U44_02370 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D E3U44_02365 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D E3U44_02000 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D E3U44_10520 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D E3U44_02055 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D E3U44_07055 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D E3U44_02060 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D E3U44_02005 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D E3U44_02030 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D E3U44_01995 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D E3U44_16015 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D E3U44_02995 cell division protein ZapA K09888 zapA; cell division protein ZapA D E3U44_03000 TIGR02449 family protein K09892 zapB; cell division protein ZapB D E3U44_04800 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD D E3U44_07005 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E3U44_03665 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D E3U44_04265 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D E3U44_04260 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D E3U44_04255 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D E3U44_01360 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E3U44_01355 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D E3U44_01350 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D E3U44_01340 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D E3U44_04140 ParA family protein K03496 parA; chromosome partitioning protein D E3U44_04145 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E3U44_09380 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D E3U44_09375 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D E3U44_04130 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D E3U44_04135 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D E3U44_04850 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D E3U44_13290 integrase K03733 xerC; integrase/recombinase XerC D E3U44_18445 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D E3U44_11085 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D E3U44_10820 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D E3U44_13780 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D E3U44_07330 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:nwr03400] D E3U44_18450 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D E3U44_05045 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D E3U44_18505 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D E3U44_11045 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D E3U44_08715 nuclease K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D E3U44_01405 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D E3U44_04790 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D E3U44_10390 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D E3U44_08405 NUDIX pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D E3U44_03395 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D E3U44_00985 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D E3U44_14765 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D E3U44_01430 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D E3U44_02190 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D E3U44_06485 deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D E3U44_18805 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E3U44_16010 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D E3U44_07335 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3U44_03525 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D E3U44_05050 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D E3U44_14320 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D E3U44_13345 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D E3U44_03240 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D E3U44_09130 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D E3U44_09135 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D E3U44_09290 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D E3U44_00525 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D E3U44_13625 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D E3U44_12605 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D E3U44_17610 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D E3U44_16435 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D E3U44_12610 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D E3U44_07000 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D E3U44_06865 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D E3U44_03165 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D E3U44_11300 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D E3U44_10485 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E3U44_04100 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E3U44_14040 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D E3U44_01510 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E3U44_13545 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E3U44_06930 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D E3U44_03095 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E3U44_03535 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3U44_19045 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_19135 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_00085 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_07040 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_10730 vsr; DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D E3U44_12855 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D E3U44_17595 recA; recombinase RecA K03553 recA; recombination protein RecA D E3U44_05275 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D E3U44_05280 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D E3U44_15935 AAA family ATPase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D E3U44_05270 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D E3U44_04015 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D E3U44_13810 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 D E3U44_13815 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D E3U44_06605 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D E3U44_04095 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D E3U44_00510 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D E3U44_00550 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D E3U44_09435 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D E3U44_03105 recR; recombination protein RecR K06187 recR; recombination protein RecR D E3U44_18795 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D E3U44_12815 DNA helicase UvrD K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D E3U44_12810 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D E3U44_12660 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D E3U44_10270 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D E3U44_04090 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D E3U44_03470 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D E3U44_06375 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E3U44_00390 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E3U44_02315 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D E3U44_14280 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D E3U44_10320 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D E3U44_17590 regulatory protein RecX K03565 recX; regulatory protein D E3U44_13905 polX; DNA polymerase/3'-5' exonuclease PolX K02347 polX; DNA polymerase (family X) D E3U44_13760 DNA-binding protein K02347 polX; DNA polymerase (family X) D E3U44_07970 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D E3U44_11885 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D E3U44_01045 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D E3U44_01050 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:nwr03029] D E3U44_04750 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D E3U44_11175 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D E3U44_14305 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D E3U44_09510 elongation factor Ts K02357 tsf; elongation factor Ts D E3U44_09090 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E3U44_09155 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E3U44_09150 fusA; elongation factor G K02355 fusA; elongation factor G D E3U44_00685 GTPase Era K03595 era; GTPase D E3U44_17680 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E3U44_01520 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E3U44_04770 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E3U44_04020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E3U44_01370 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D E3U44_07900 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D E3U44_01365 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D E3U44_13230 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D E3U44_01870 toprim domain-containing protein K17680 PEO1; twinkle protein [EC:5.6.2.3] D E3U44_03535 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3U44_09545 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D E3U44_04330 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK D E3U44_06945 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E3U44_06940 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D E3U44_05235 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3U44_17875 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3U44_05230 co-chaperone GroES K04078 groES; chaperonin GroES D E3U44_17870 co-chaperone GroES K04078 groES; chaperonin GroES D E3U44_06950 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D E3U44_13645 MBL fold metallo-hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D E3U44_13055 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3U44_08675 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D E3U44_14500 CIA30 family protein K18159 NDUFAF1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1 D E3U44_17865 acyl-CoA dehydrogenase K15980 ACAD9; acyl-CoA dehydrogenase family member 9 [EC:1.3.99.-] D E3U44_11085 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D E3U44_03760 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D E3U44_03790 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D E3U44_03765 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D E3U44_04120 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E3U44_03775 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D E3U44_06355 SCO family protein K07152 SCO1; protein SCO1 D E3U44_13610 SCO family protein K07152 SCO1; protein SCO1 D E3U44_14625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:nwr02000] D E3U44_01570 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D E3U44_12360 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D E3U44_00265 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D E3U44_10845 extracellular solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein D E3U44_01925 ABC transporter permease subunit K05773 tupB; tungstate transport system permease protein D E3U44_01930 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D E3U44_10025 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D E3U44_10020 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D E3U44_15060 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D E3U44_15045 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D E3U44_15050 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D E3U44_15055 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D E3U44_12220 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein D E3U44_12215 ATP-binding cassette domain-containing protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D E3U44_02140 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D E3U44_06150 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D E3U44_02130 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D E3U44_06145 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D E3U44_02135 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D E3U44_06140 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D E3U44_02145 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D E3U44_10265 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D E3U44_17120 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3U44_00465 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3U44_06155 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3U44_06165 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3U44_06160 anti-sigma factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D E3U44_08745 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D E3U44_12875 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D E3U44_08750 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D E3U44_12870 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D E3U44_08755 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D E3U44_12865 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D E3U44_08760 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D E3U44_12860 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D E3U44_10630 ehuB; ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D E3U44_10620 ehuD; ectoine/hydroxyectoine ABC transporter permease subunit EhuD K02029 ABC.PA.P; polar amino acid transport system permease protein D E3U44_10625 ehuC; ectoine/hydroxyectoine ABC transporter permease subunit EhuC K02029 ABC.PA.P; polar amino acid transport system permease protein D E3U44_05170 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D E3U44_13200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D E3U44_00360 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D E3U44_11465 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D E3U44_00135 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D E3U44_05165 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D E3U44_11470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D E3U44_00130 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D E3U44_05160 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D E3U44_00120 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D E3U44_10455 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D E3U44_10440 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein D E3U44_10450 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D E3U44_08695 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D E3U44_08705 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D E3U44_08700 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D E3U44_10125 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3U44_02670 phosphate ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3U44_02785 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3U44_08205 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3U44_02665 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3U44_02780 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3U44_08210 ATP-binding cassette domain-containing protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3U44_10130 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3U44_14030 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D E3U44_14025 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D E3U44_06110 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D E3U44_01415 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein D E3U44_17440 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein D E3U44_01410 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D E3U44_17445 ATP-binding cassette domain-containing protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D E3U44_01420 ABC transporter K25153 gldG; gliding motility-associatede transport system auxiliary component D E3U44_10865 ABC transporter permease K25180 ybhR; drug efflux transport system permease protein D E3U44_10870 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein D E3U44_10875 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein D E3U44_10880 hlyD; secretion protein HlyD K25183 ybhG; membrane fusion protein YbhG D E3U44_01540 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D E3U44_01545 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D E3U44_18920 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D E3U44_18915 heme ABC transporter permease K02195 ccmC; heme exporter protein C D E3U44_18910 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D E3U44_18905 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D E3U44_06635 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D E3U44_06855 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D E3U44_06640 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D E3U44_06860 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D E3U44_10065 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D E3U44_07445 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D E3U44_07450 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D E3U44_16225 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D E3U44_17290 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D E3U44_17295 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D E3U44_10070 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D E3U44_07455 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D E3U44_17285 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D E3U44_16220 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D E3U44_00635 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D E3U44_18630 ammonium transporter K06580 SLC42A; ammonium transporter Rh D E3U44_01080 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D E3U44_06045 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D E3U44_03365 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D E3U44_07145 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D E3U44_13920 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D E3U44_11745 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D E3U44_12330 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D E3U44_06070 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D E3U44_17890 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D E3U44_06075 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D E3U44_06080 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D E3U44_06095 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D E3U44_16945 ion transporter K10716 kch; voltage-gated potassium channel D E3U44_04740 stringent starvation protein A K03599 sspA; stringent starvation protein A D E3U44_13070 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease D E3U44_06200 formate/nitrite transporter family protein K21993 fdhC; formate transporter D E3U44_02485 mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel D E3U44_05800 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D E3U44_05525 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D E3U44_03225 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D E3U44_18065 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D E3U44_17065 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D E3U44_06065 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D E3U44_02525 flagellar motor protein K02556 motA; chemotaxis protein MotA D E3U44_10400 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D E3U44_02520 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D E3U44_10405 type VI secretion system protein TssL K02557 motB; chemotaxis protein MotB D E3U44_01560 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D E3U44_03185 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D E3U44_03190 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D E3U44_04865 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB D E3U44_04870 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D E3U44_12415 exbB; tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB D E3U44_03180 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D E3U44_12420 exbD; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D E3U44_04875 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D E3U44_01565 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D E3U44_05290 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D E3U44_05295 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D E3U44_11535 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D E3U44_14945 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D E3U44_09365 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D E3U44_03610 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E3U44_18485 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E3U44_03615 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E3U44_08730 porin K07221 oprO_P; phosphate-selective porin OprO and OprP D E3U44_01075 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D E3U44_11270 DUF4398 domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D E3U44_12165 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D E3U44_17960 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D E3U44_10030 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3U44_12200 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3U44_10235 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3U44_12355 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3U44_12405 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3U44_14925 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D E3U44_11980 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D E3U44_12055 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D E3U44_12235 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D E3U44_06685 type I secretion protein TolC K12340 tolC; outer membrane protein D E3U44_00155 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D E3U44_08110 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D E3U44_07535 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D E3U44_16590 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D E3U44_09545 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D E3U44_09570 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D E3U44_01025 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D E3U44_01250 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D E3U44_18775 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D E3U44_05590 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA D E3U44_05595 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB D E3U44_06115 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D E3U44_06120 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D E3U44_14665 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein D E3U44_01515 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D E3U44_04565 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein D E3U44_03260 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D E3U44_02080 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D E3U44_14545 ZIP family metal transporter K16267 zipB; zinc and cadmium transporter D E3U44_05880 hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family D E3U44_13725 hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family D E3U44_11955 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D E3U44_14935 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D E3U44_11990 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein D E3U44_03660 multidrug efflux protein K18138 acrB; multidrug efflux pump D E3U44_11855 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump D E3U44_02400 sugE; quaternary ammonium compound efflux SMR transporter SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE D E3U44_11940 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D E3U44_14680 sodium/proline symporter K11928 putP; sodium/proline symporter D E3U44_08460 urea transporter K20989 DUR3; urea-proton symporter D E3U44_13925 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D E3U44_18010 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D E3U44_17365 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump D E3U44_03905 sodium:proton antiporter K24160 NHA1; sodium/hydrogen antiporter D E3U44_03315 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter D E3U44_02435 potassium transporter K03455 KEA1_2_3; K+:H+ antiporter D E3U44_09695 portal protein K03455 KEA1_2_3; K+:H+ antiporter D E3U44_10655 potassium transporter K03455 KEA1_2_3; K+:H+ antiporter D E3U44_03895 Kef family K(+) transporter K26735 KEA4_5_6; K+:H+ antiporter D E3U44_10660 cation:proton antiporter K26730 napA; Na+:H+ antiporter D E3U44_15720 cation:proton antiporter K26730 napA; Na+:H+ antiporter D E3U44_01795 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D E3U44_10950 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D E3U44_11790 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D E3U44_04575 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D E3U44_11795 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D E3U44_03520 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D E3U44_05870 chloride channel protein K03281 clcA; chloride channel protein, CIC family D E3U44_18220 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D E3U44_12465 Na+/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D E3U44_12455 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D E3U44_12490 cation transporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D E3U44_12485 pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D E3U44_12480 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D E3U44_03755 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D E3U44_11865 AEC family transporter K24180 mleP; malate permease and related proteins D E3U44_10375 AI-2E family transporter K03548 perM; putative permease D E3U44_12555 AI-2E family transporter K03548 perM; putative permease D E3U44_18790 MarC family protein K05595 marC; multiple antibiotic resistance protein D E3U44_02030 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D E3U44_12350 c-type cytochrome K07243 FTR; high-affinity iron transporter D E3U44_03175 energy transducer TonB K03832 tonB; periplasmic protein TonB D E3U44_12425 energy transducer TonB K03832 tonB; periplasmic protein TonB D E3U44_04880 energy transducer TonB K03832 tonB; periplasmic protein TonB D E3U44_05580 energy transducer TonB K03832 tonB; periplasmic protein TonB D E3U44_05310 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D E3U44_05300 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D E3U44_05305 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D E3U44_11520 hypothetical protein K03641 tolB; TolB protein D E3U44_14005 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D E3U44_13600 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D E3U44_11950 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D E3U44_14930 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D E3U44_12240 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D E3U44_11985 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D E3U44_03665 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D E3U44_08065 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system D E3U44_16780 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D E3U44_07555 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D E3U44_08120 tyrosine-protein kinase family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D E3U44_07550 hypothetical protein K25590 epsF; protein tyrosine kinase modulator D E3U44_08115 chain-length determining protein K25590 epsF; protein tyrosine kinase modulator D E3U44_13145 tryptophan-rich sensory protein K05770 TSPO; translocator protein D E3U44_18930 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D E3U44_17090 copper resistance protein CopD K07245 pcoD; copper resistance protein D D E3U44_17095 copper resistance protein CopC K07156 copC; copper resistance protein C C 02044 Secretion system [BR:nwr02044] D E3U44_06685 type I secretion protein TolC K12340 tolC; outer membrane protein D E3U44_07890 ATPase K02450 gspA; general secretion pathway protein A D E3U44_13300 AAA family ATPase K02450 gspA; general secretion pathway protein A D E3U44_02700 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D E3U44_06415 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D E3U44_06420 type II secretion system F family protein K02455 gspF; general secretion pathway protein F D E3U44_06425 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D E3U44_06430 gspH; type II secretion system protein GspH K02457 gspH; general secretion pathway protein H D E3U44_06435 type II secretion system protein K02458 gspI; general secretion pathway protein I D E3U44_02725 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D E3U44_02720 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D E3U44_02715 twitching motility protein PilT K02461 gspL; general secretion pathway protein L D E3U44_02710 general secretion pathway protein K02462 gspM; general secretion pathway protein M D E3U44_02705 pilus assembly protein PilZ K02463 gspN; general secretion pathway protein N D E3U44_04810 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D E3U44_01160 pilin K02650 pilA; type IV pilus assembly protein PilA D E3U44_04820 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D E3U44_04815 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D E3U44_18545 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D E3U44_07510 response regulator K02657 pilG; twitching motility two-component system response regulator PilG D E3U44_07505 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D E3U44_07500 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D E3U44_07495 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D E3U44_07490 chemotaxis protein CheR K02661 pilK; type IV pilus assembly protein PilK D E3U44_04600 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D E3U44_04605 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D E3U44_04610 pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D E3U44_04615 pilus assembly protein PilQ K02665 pilP; type IV pilus assembly protein PilP D E3U44_04620 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D E3U44_03340 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D E3U44_11860 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D E3U44_03335 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D E3U44_18525 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D E3U44_18530 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D E3U44_18535 pilus assembly protein PilZ K02673 pilX; type IV pilus assembly protein PilX D E3U44_18540 fimbrial assembly protein K02674 pilY1; type IV pilus assembly protein PilY1 D E3U44_13550 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D E3U44_18520 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT D E3U44_13875 tetratricopeptide repeat protein K08086 fimV; pilus assembly protein FimV D E3U44_16180 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D E3U44_16170 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D E3U44_16165 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D E3U44_16140 pilus assembly protein CpaF K02282 cpaE; pilus assembly protein CpaE D E3U44_16135 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D E3U44_16130 secretion system protein K12510 tadB; tight adherence protein B D E3U44_16125 type II secretion system F family protein K12511 tadC; tight adherence protein C D E3U44_16185 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D E3U44_03355 YggT family protein K02221 yggT; YggT family protein D E3U44_01555 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D E3U44_02545 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D E3U44_02550 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D E3U44_08945 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D E3U44_08955 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D E3U44_08960 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D E3U44_02575 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D E3U44_02570 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D E3U44_02565 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D E3U44_02560 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D E3U44_02555 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D E3U44_18435 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D E3U44_01975 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E3U44_03985 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3U44_09010 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D E3U44_09100 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E3U44_07140 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E3U44_09015 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E3U44_02935 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E3U44_09265 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E3U44_18475 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D E3U44_08360 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E3U44_09005 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3U44_18845 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3U44_04120 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E3U44_08620 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D E3U44_03860 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D E3U44_08625 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D E3U44_03865 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D E3U44_03870 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:nwr02042] D E3U44_03610 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E3U44_18485 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E3U44_03615 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E3U44_11385 DNA-binding protein K11068 hlyIII; hemolysin III D E3U44_05955 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:nwr02022] D E3U44_08740 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D E3U44_08735 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D E3U44_03510 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D E3U44_03515 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D E3U44_06455 sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D E3U44_01220 ATPase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D E3U44_01215 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D E3U44_08480 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D E3U44_08490 response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D E3U44_06460 HAMP domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D E3U44_07120 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D E3U44_15800 response regulator K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D E3U44_07485 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D E3U44_07510 response regulator K02657 pilG; twitching motility two-component system response regulator PilG D E3U44_07505 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D E3U44_07480 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D E3U44_16060 response regulator K11355 rcp1; two-component system, chemotaxis family, response regulator Rcp1 D E3U44_12075 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_00625 GHKL domain-containing protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_00660 response regulator K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_03565 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D E3U44_16045 response regulator transcription factor K14987 fixJ; two-component system, LuxR family, response regulator FixJ D E3U44_08935 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D E3U44_16790 PAS domain S-box protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D E3U44_16795 response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:nwr02035] D E3U44_07125 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D E3U44_07120 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D E3U44_15800 response regulator K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D E3U44_08955 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D E3U44_08960 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D E3U44_08965 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D E3U44_02570 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D E3U44_02565 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D E3U44_02560 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D E3U44_02555 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D E3U44_02545 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D E3U44_02550 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D E3U44_08950 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D E3U44_02580 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D E3U44_02575 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D E3U44_08945 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D E3U44_08880 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D E3U44_01620 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D E3U44_08875 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D E3U44_02585 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D E3U44_08940 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D E3U44_08970 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D E3U44_08845 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D E3U44_08850 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D E3U44_08855 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D E3U44_08865 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D E3U44_08870 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D E3U44_08885 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D E3U44_08860 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D E3U44_08890 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D E3U44_08895 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D E3U44_01630 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D E3U44_08900 flagellin K02406 fliC; flagellin D E3U44_08910 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2 D E3U44_08915 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D E3U44_08920 flagellar protein FliT K02423 fliT; flagellar protein FliT D E3U44_02530 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D E3U44_02525 flagellar motor protein K02556 motA; chemotaxis protein MotA D E3U44_10400 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D E3U44_02520 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D E3U44_10405 type VI secretion system protein TssL K02557 motB; chemotaxis protein MotB D E3U44_08930 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D E3U44_08935 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D E3U44_01625 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D E3U44_08905 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D E3U44_02540 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D E3U44_02535 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D E3U44_07510 response regulator K02657 pilG; twitching motility two-component system response regulator PilG D E3U44_07505 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D E3U44_07500 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D E3U44_07495 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D E3U44_07490 chemotaxis protein CheR K02661 pilK; type IV pilus assembly protein PilK D E3U44_07485 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D E3U44_01215 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D E3U44_01220 ATPase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D E3U44_03340 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D E3U44_11860 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D E3U44_03335 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D E3U44_07480 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D E3U44_07475 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC D E3U44_01160 pilin K02650 pilA; type IV pilus assembly protein PilA D E3U44_04820 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D E3U44_04815 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D E3U44_04810 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D E3U44_04620 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D E3U44_04615 pilus assembly protein PilQ K02665 pilP; type IV pilus assembly protein PilP D E3U44_04610 pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D E3U44_04605 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D E3U44_04600 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D E3U44_13550 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D E3U44_18525 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D E3U44_18530 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D E3U44_18535 pilus assembly protein PilZ K02673 pilX; type IV pilus assembly protein PilX D E3U44_18540 fimbrial assembly protein K02674 pilY1; type IV pilus assembly protein PilY1 D E3U44_18545 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D E3U44_16185 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D E3U44_16180 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D E3U44_16170 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D E3U44_16165 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D E3U44_16140 pilus assembly protein CpaF K02282 cpaE; pilus assembly protein CpaE D E3U44_16135 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:nwr04812] D E3U44_02500 amrB; AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein D E3U44_01360 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E3U44_01995 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D E3U44_02000 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D E3U44_04265 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D E3U44_04260 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D E3U44_04255 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D E3U44_04140 ParA family protein K03496 parA; chromosome partitioning protein D E3U44_04145 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:nwr04147] D E3U44_14625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D E3U44_10515 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E3U44_06965 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D E3U44_06970 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D E3U44_12830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3U44_06975 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3U44_10590 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D E3U44_05235 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3U44_17875 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3U44_04330 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK D E3U44_06945 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E3U44_17720 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D E3U44_03160 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D E3U44_09090 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E3U44_09155 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E3U44_03855 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D E3U44_09605 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E3U44_13320 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D E3U44_09615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_09675 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D E3U44_01590 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D E3U44_01955 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D E3U44_10255 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D E3U44_04230 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D E3U44_11235 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D E3U44_06265 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D E3U44_04055 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D E3U44_09655 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D E3U44_17715 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D E3U44_14515 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D E3U44_01445 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3U44_02980 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D E3U44_17210 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D E3U44_01960 ketohexokinase K00846 KHK; ketohexokinase [EC:2.7.1.3] D E3U44_02440 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D E3U44_04030 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D E3U44_10280 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E3U44_02320 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D E3U44_07030 M48 family peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D E3U44_11640 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_11230 FAD-binding protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_03625 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3U44_06215 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D E3U44_11450 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D E3U44_08420 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D E3U44_02940 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D E3U44_16465 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:nwr02048] D E3U44_12660 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D E3U44_12665 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D E3U44_12655 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D E3U44_12645 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1 D E3U44_12650 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2 D E3U44_12640 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d D E3U44_03920 cas6e; type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE D E3U44_07305 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D E3U44_13775 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D E3U44_18365 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D E3U44_00535 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D E3U44_07300 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E3U44_13785 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E3U44_18380 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E3U44_17510 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E3U44_18710 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E3U44_00555 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E3U44_07295 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D E3U44_13790 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D E3U44_17515 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D E3U44_18740 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D E3U44_00560 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D E3U44_19045 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_19135 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_00085 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_07040 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D E3U44_10715 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E3U44_00325 restriction endonuclease K07448 mrr; restriction system protein D E3U44_01110 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K19156 prlF; antitoxin PrlF D E3U44_09845 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D E3U44_01190 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D E3U44_09840 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D E3U44_16955 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D E3U44_01195 ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D E3U44_16970 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D E3U44_16975 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM D E3U44_01105 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D E3U44_10825 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D E3U44_12945 hypothetical protein K07334 higB-1; toxin HigB-1 D E3U44_16980 peptidase K07334 higB-1; toxin HigB-1 D E3U44_04965 hypothetical protein K07334 higB-1; toxin HigB-1 D E3U44_05675 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D E3U44_18590 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D E3U44_10060 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D E3U44_09810 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_10830 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_15560 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_16985 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_17465 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_04970 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_05680 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_18585 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D E3U44_18680 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D E3U44_18685 antitoxin K18829 mvpT; antitoxin VapB D E3U44_00290 Arc family DNA-binding protein K21495 fitA; antitoxin FitA D E3U44_01995 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D E3U44_01360 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E3U44_09380 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D E3U44_09375 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D E3U44_04720 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3U44_00740 hypothetical protein K19168 cptA; toxin CptA D E3U44_00745 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D E3U44_13055 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:nwr04090] D E3U44_18630 ammonium transporter K06580 SLC42A; ammonium transporter Rh C 01504 Antimicrobial resistance genes [BR:nwr01504] D E3U44_17365 sodium:proton antiporter K18218 tet35; tetracycline resistance efflux pump D E3U44_13325 lyase K18235 vgb; virginiamycin B lyase [EC:4.2.99.-] D E3U44_03665 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D E3U44_03660 multidrug efflux protein K18138 acrB; multidrug efflux pump D E3U44_00155 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D E3U44_05240 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D E3U44_06685 type I secretion protein TolC K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:nwr00537] D E3U44_10890 otsB; trehalose-phosphatase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:nwr03100] D E3U44_01635 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3U44_14670 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3U44_17665 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3U44_17565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3U44_18400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3U44_07990 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3U44_01775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3U44_14330 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D E3U44_00380 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D E3U44_13360 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D E3U44_04295 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D E3U44_06830 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D E3U44_14675 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E3U44_17840 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E3U44_14220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3U44_13355 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3U44_09080 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3U44_18395 tRNA-His K14226 tRNA-His; tRNA His D E3U44_17670 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3U44_13450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3U44_02930 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3U44_13030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3U44_06395 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3U44_18390 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E3U44_05330 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E3U44_11160 tRNA-Met K14230 tRNA-Met; tRNA Met D E3U44_03925 tRNA-Met K14230 tRNA-Met; tRNA Met D E3U44_04320 tRNA-Met K14230 tRNA-Met; tRNA Met D E3U44_05220 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D E3U44_14270 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E3U44_03705 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E3U44_18405 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E3U44_13075 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3U44_17570 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3U44_03085 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3U44_07315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3U44_10370 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3U44_14000 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3U44_09085 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3U44_09095 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D E3U44_09075 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D E3U44_14315 tRNA-Val K14237 tRNA-Val; tRNA Val D E3U44_00385 tRNA-Val K14237 tRNA-Val; tRNA Val D E3U44_08645 tRNA-Val K14237 tRNA-Val; tRNA Val D E3U44_17675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D E3U44_12985 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D E3U44_12990 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D E3U44_03090 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D E3U44_02075 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D E3U44_18750 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D E3U44_12890 NAD-dependent epimerase/dehydratase family protein K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219] D E3U44_06655 pqqC; pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D E3U44_02855 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D E3U44_11695 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D E3U44_14145 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D E3U44_09970 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D E3U44_12795 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D E3U44_00250 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D E3U44_01040 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D E3U44_13020 peroxiredoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D E3U44_16865 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D E3U44_12385 ornithine monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196] D E3U44_06020 twin-arginine translocation signal domain-containing protein K06324 cotA; spore coat protein A, manganese oxidase [EC:1.16.3.3] D E3U44_12060 twin-arginine translocation signal domain-containing protein K22348 moxA; manganese oxidase [EC:1.16.3.3] D E3U44_10430 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D E3U44_10350 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D E3U44_05950 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D E3U44_06645 pqqE; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D E3U44_02495 amrS; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D E3U44_12450 NADH dehydrogenase K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D E3U44_09410 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D E3U44_00115 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D E3U44_06680 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D E3U44_17925 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D E3U44_05975 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D E3U44_09020 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D E3U44_01140 methyltransferase K05303 K05303; O-methyltransferase [EC:2.1.1.-] D E3U44_17075 hpnR; hopanoid C-3 methylase HpnR K22704 hpnR; hopanoid C-3 methylase [EC:2.1.1.-] D E3U44_11590 hypothetical protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D E3U44_16660 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D E3U44_04570 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D E3U44_00305 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D E3U44_09625 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D E3U44_03115 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D E3U44_03120 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D E3U44_01120 glycosyltransferase family 4 protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D E3U44_04525 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D E3U44_17160 DegT/DnrJ/EryC1/StrS family aminotransferase K20084 gnnB; UDP-N-acetyl-3-dehydro-alpha-D-glucosamine 3-aminotranferase [EC:2.6.1.122] D E3U44_09975 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D E3U44_10120 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D E3U44_00580 pap; polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D E3U44_05255 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D E3U44_16990 maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D E3U44_05665 TIR domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D E3U44_15905 maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D E3U44_15915 Retron-type RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D E3U44_11015 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D E3U44_06090 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D E3U44_08290 sulfotransferase K01021 TPST; protein-tyrosine sulfotransferase [EC:2.8.2.20] D E3U44_13275 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D E3U44_05285 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D E3U44_16785 capsular biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D E3U44_08800 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D E3U44_17385 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D E3U44_17650 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D E3U44_13555 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D E3U44_00500 DUF4124 domain-containing protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D E3U44_17175 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D E3U44_03490 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D E3U44_01470 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D E3U44_14905 PIG-L family deacetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D E3U44_08775 CYTH domain-containing protein K18446 ygiF; triphosphatase [EC:3.6.1.25] D E3U44_14645 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D E3U44_09300 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D E3U44_07015 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D E3U44_09670 methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13] D E3U44_09030 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D E3U44_14385 RNA 3'-terminal phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] D E3U44_14965 RNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-] D E3U44_11060 rsxD; electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D E3U44_11065 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D E3U44_11070 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D E3U44_12035 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D E3U44_10895 cation-transporting P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D E3U44_12565 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D E3U44_17320 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D E3U44_18565 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D E3U44_15740 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC C 99982 Energy metabolism D E3U44_10335 ferredoxin family protein K05524 fdxA; ferredoxin D E3U44_11055 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D E3U44_11050 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D E3U44_11075 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D E3U44_00835 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins D E3U44_15535 VWA domain-containing protein K02448 norD; nitric oxide reductase NorD protein D E3U44_15540 CbbQ/NirQ/NorQ/GpvN family protein K04748 norQ; nitric oxide reductase NorQ protein D E3U44_16090 dodecin domain-containing protein K09165 K09165; dodecin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D E3U44_16035 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein D E3U44_03345 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D E3U44_10340 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A D E3U44_10345 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B D E3U44_07725 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein D E3U44_13415 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D E3U44_04250 heme biosynthesis protein HemY K02498 hemY; HemY protein D E3U44_09040 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D E3U44_09045 sterol-binding protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D E3U44_07960 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism C 99999 Others D E3U44_06310 DoxX family protein K15977 K15977; putative oxidoreductase D E3U44_15160 bifunctional acyl-CoA synthetase/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase D E3U44_11840 bifunctional acyl-CoA synthetase/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D E3U44_06720 cold-shock protein K03704 cspA; cold shock protein D E3U44_04945 cold-shock protein K03704 cspA; cold shock protein D E3U44_16885 RNA-binding transcriptional accessory protein K06959 tex; protein Tex D E3U44_12335 transcriptional regulator K07743 K07743; transcriptional regulator C 99974 Translation D E3U44_00810 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D E3U44_08680 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D E3U44_13455 trigger factor K03545 tig; trigger factor D E3U44_18755 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D E3U44_16490 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC D E3U44_16480 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D E3U44_16475 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D E3U44_12805 AIR synthase K04655 hypE; hydrogenase expression/formation protein HypE D E3U44_16530 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF D E3U44_07965 ATP-dependent protease K07391 comM; magnesium chelatase family protein D E3U44_03595 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D E3U44_11515 DsbA family protein K07396 K07396; putative protein-disulfide isomerase D E3U44_18880 OsmC family protein K07397 yhfA; putative redox protein D E3U44_13765 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein D E3U44_16360 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor D E3U44_13690 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D E3U44_04400 DUF1156 domain-containing protein K07445 K07445; putative DNA methylase D E3U44_16995 IS607 family transposase K07450 K07450; putative resolvase D E3U44_04540 JAB domain-containing protein K03630 radC; DNA repair protein RadC D E3U44_15910 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D E3U44_02105 YraN family protein K07460 yraN; putative endonuclease D E3U44_03480 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D E3U44_01865 terminase small subunit K07474 xtmA; phage terminase small subunit D E3U44_07065 replication-associated recombination protein A K07478 ycaJ; putative ATPase D E3U44_01745 toprim domain-containing protein K06919 K06919; putative DNA primase/helicase D E3U44_18300 hypothetical protein K06919 K06919; putative DNA primase/helicase D E3U44_17545 topoisomerase K06919 K06919; putative DNA primase/helicase D E3U44_19060 DUF3987 domain-containing protein K06919 K06919; putative DNA primase/helicase D E3U44_00100 DUF3987 domain-containing protein K06919 K06919; putative DNA primase/helicase D E3U44_09465 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease D E3U44_07650 hypothetical protein K07480 insB; insertion element IS1 protein InsB D E3U44_10190 IS5 family transposase K07481 K07481; transposase, IS5 family D E3U44_16715 IS5 family transposase K07481 K07481; transposase, IS5 family D E3U44_06505 hypothetical protein K07483 K07483; transposase D E3U44_07310 ISL3 family transposase K07485 K07485; transposase D E3U44_07680 hypothetical protein K07485 K07485; transposase D E3U44_07685 ISL3 family transposase K07485 K07485; transposase D E3U44_07640 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D E3U44_01180 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D E3U44_04895 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D E3U44_05485 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D E3U44_05710 addiction module toxin RelE K07491 rayT; REP-associated tyrosine transposase D E3U44_04975 transposase K07496 K07496; putative transposase D E3U44_05490 transposase K07496 K07496; putative transposase D E3U44_02085 transposase K07496 K07496; putative transposase D E3U44_11875 transposase K07496 K07496; putative transposase D E3U44_16260 transposase K07496 K07496; putative transposase D E3U44_04995 hypothetical protein K07497 K07497; putative transposase D E3U44_06500 hypothetical protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D E3U44_13745 PspA/IM30 family protein K03969 pspA; phage shock protein A D E3U44_03100 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D E3U44_03890 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D E3U44_14770 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D E3U44_04920 sodium transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D E3U44_15775 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D E3U44_18760 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D E3U44_11890 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D E3U44_08795 septation protein A K06190 ispZ; intracellular septation protein D E3U44_00945 SpoVR family protein K06415 spoVR; stage V sporulation protein R C 99993 Cell motility C 99995 Signaling proteins D E3U44_12905 TerD family protein K05795 terD; tellurium resistance protein TerD D E3U44_12935 TerD family protein K05791 terZ; tellurium resistance protein TerZ D E3U44_11650 universal stress protein K14055 uspE; universal stress protein E D E3U44_12495 universal stress protein K14055 uspE; universal stress protein E D E3U44_01230 typA; translational GTPase TypA K06207 typA; GTP-binding protein D E3U44_04555 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D E3U44_00955 serine protein kinase K07180 prkA; serine protein kinase D E3U44_07980 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein D E3U44_08995 hypothetical protein K08481 kaiB; circadian clock protein KaiB D E3U44_11545 circadian clock protein KaiB K08481 kaiB; circadian clock protein KaiB D E3U44_08985 hypothetical protein K08482 kaiC; circadian clock protein KaiC D E3U44_09760 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC D E3U44_11550 kaiC; circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC D E3U44_10980 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC D E3U44_16395 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC D E3U44_18440 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D E3U44_07060 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D E3U44_04285 lolB; lipoprotein localization protein LolB K02494 lolB; outer membrane lipoprotein LolB D E3U44_15765 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D E3U44_06135 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D E3U44_09550 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D E3U44_09420 LysM peptidoglycan-binding domain-containing protein K06194 nlpD; lipoprotein NlpD D E3U44_11920 hypothetical protein K07285 slp; outer membrane lipoprotein D E3U44_05465 hypothetical protein K07285 slp; outer membrane lipoprotein D E3U44_05470 Slp family lipoprotein K07285 slp; outer membrane lipoprotein D E3U44_15985 hypothetical protein K07285 slp; outer membrane lipoprotein D E3U44_18495 AsmA family protein K07289 asmA; AsmA protein D E3U44_05515 AsmA family protein K07290 yhjG; AsmA family protein D E3U44_07460 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D E3U44_05910 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D E3U44_18925 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D E3U44_18940 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D E3U44_18945 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D E3U44_17730 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D E3U44_08765 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D E3U44_16005 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D E3U44_15185 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D E3U44_04930 glucan biosynthesis protein D K03670 mdoG; periplasmic glucans biosynthesis protein D E3U44_12900 Tellurite resistance TerB K05793 terB; tellurite resistance protein TerB D E3U44_02490 TerC/Alx family metal homeostasis membrane protein K05794 terC; tellurite resistance protein TerC D E3U44_02280 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D E3U44_13190 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D E3U44_12305 hemin-degrading factor K07225 hmuS; putative hemin transport protein D E3U44_12570 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO D E3U44_05815 metallothionein K21904 smtA; metallothionein B B 09194 Poorly characterized C 99996 General function prediction only D E3U44_13480 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D E3U44_15325 cation transport regulator ChaB K06197 chaB; cation transport regulator D E3U44_15065 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein D E3U44_15195 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein D E3U44_06665 pqqA; pyrroloquinoline quinone precursor peptide PqqA K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A D E3U44_06660 pqqB; pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D E3U44_06650 pqqD; pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D E3U44_00300 tRNA-binding protein K06878 K06878; tRNA-binding protein D E3U44_11485 rssA; patatin-like phospholipase RssA K07001 K07001; NTE family protein D E3U44_16505 patatin K07001 K07001; NTE family protein D E3U44_02345 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D E3U44_00855 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D E3U44_00845 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D E3U44_07710 metal-dependent hydrolase K07038 K07038; inner membrane protein D E3U44_03580 metal-dependent hydrolase K07038 K07038; inner membrane protein D E3U44_06910 metal-dependent hydrolase K07038 K07038; inner membrane protein D E3U44_15430 YihY family inner membrane protein K07058 K07058; membrane protein D E3U44_15465 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D E3U44_13680 YihY family inner membrane protein K07058 K07058; membrane protein D E3U44_09990 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D E3U44_00455 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D E3U44_00450 alpha/beta hydrolase K07100 K07100; putative phosphoribosyl transferase D E3U44_05225 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D E3U44_11275 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D E3U44_12390 fhuF; siderophore-iron reductase FhuF K13255 fhuF; ferric iron reductase protein FhuF D E3U44_15280 cytochrome c oxidase assembly protein K02351 K02351; putative membrane protein D E3U44_15490 cytochrome c oxidase assembly protein K02351 K02351; putative membrane protein D E3U44_13260 LemA family protein K03744 lemA; LemA protein D E3U44_03475 DUF494 domain-containing protein K03747 smg; Smg protein D E3U44_13475 SPOR domain-containing protein K03749 dedD; DedD protein D E3U44_15320 DUF202 domain-containing protein K00389 yidH; putative membrane protein D E3U44_12065 SHOCT domain-containing protein K08982 K08982; putative membrane protein D E3U44_15730 TIGR01620 family protein K08990 ycjF; putative membrane protein D E3U44_17005 zinc chelation protein SecC K09858 K09858; SEC-C motif domain protein D E3U44_13305 cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein C 99997 Function unknown D E3U44_02845 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein D E3U44_03410 alpha/beta hydrolase K06889 K06889; uncharacterized protein D E3U44_05445 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein D E3U44_04680 ATP-grasp domain-containing protein K06913 K06913; uncharacterized protein D E3U44_15735 YcjX family protein K06918 K06918; uncharacterized protein D E3U44_11155 ATP-binding protein K06923 K06923; uncharacterized protein D E3U44_07525 GTP-binding protein K06945 K06945; uncharacterized protein D E3U44_01225 hypothetical protein K06950 K06950; uncharacterized protein D E3U44_02420 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein D E3U44_03295 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D E3U44_17905 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D E3U44_05075 peptidase C39 K06992 K06992; uncharacterized protein D E3U44_11320 DUF861 domain-containing protein K06995 K06995; uncharacterized protein D E3U44_17125 hopanoid biosynthesis-associated RND transporter HpnN K07003 K07003; uncharacterized protein D E3U44_10580 hydrolase K07019 K07019; uncharacterized protein D E3U44_05630 aminoglycoside phosphotransferase K07028 K07028; uncharacterized protein D E3U44_13910 hypothetical protein K07028 K07028; uncharacterized protein D E3U44_06235 amidohydrolase K07045 K07045; uncharacterized protein D E3U44_18730 nucleotidyltransferase K07075 K07075; uncharacterized protein D E3U44_01165 nucleotidyltransferase K07075 K07075; uncharacterized protein D E3U44_18580 DNA polymerase subunit beta K07075 K07075; uncharacterized protein D E3U44_09330 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D E3U44_03375 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D E3U44_15715 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D E3U44_00965 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D E3U44_14860 PhoX family phosphatase K07093 K07093; uncharacterized protein D E3U44_10045 metallophosphoesterase K07098 K07098; uncharacterized protein D E3U44_03550 metallophosphoesterase K07098 K07098; uncharacterized protein D E3U44_13335 metallophosphoesterase K07098 K07098; uncharacterized protein D E3U44_13635 YeeE/YedE family protein K07112 K07112; uncharacterized protein D E3U44_13640 YeeE/YedE family protein K07112 K07112; uncharacterized protein D E3U44_02100 penicillin-binding protein activator K07121 K07121; uncharacterized protein D E3U44_15815 sel1 repeat family protein K07126 K07126; uncharacterized protein D E3U44_11615 hypothetical protein K07131 K07131; uncharacterized protein D E3U44_08540 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D E3U44_03940 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D E3U44_15725 UPF0182 family protein K09118 K09118; uncharacterized protein D E3U44_10085 DUF99 family protein K09120 K09120; uncharacterized protein D E3U44_03360 YggU family protein K09131 K09131; uncharacterized protein D E3U44_09360 DUF190 domain-containing protein K09137 K09137; uncharacterized protein D E3U44_02505 amrA; AmmeMemoRadiSam system protein A K09141 K09141; uncharacterized protein D E3U44_04075 DUF447 family protein K09154 K09154; uncharacterized protein D E3U44_11835 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D E3U44_14125 ferritin K09700 K09700; uncharacterized protein D E3U44_06340 hypothetical protein K09717 K09717; uncharacterized protein D E3U44_17330 hypothetical protein K09732 K09732; uncharacterized protein D E3U44_08790 YciI family protein K09780 K09780; uncharacterized protein D E3U44_00950 DUF444 family protein K09786 K09786; uncharacterized protein D E3U44_14555 DUF454 domain-containing protein K09790 K09790; uncharacterized protein D E3U44_01580 Trm112 family protein K09791 K09791; uncharacterized protein D E3U44_10015 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D E3U44_12930 DUF475 domain-containing protein K09799 K09799; uncharacterized protein D E3U44_18770 RnfH family protein K09801 K09801; uncharacterized protein D E3U44_09780 BrnT family toxin K09803 K09803; uncharacterized protein D E3U44_10700 BrnT family toxin K09803 K09803; uncharacterized protein D E3U44_18330 BrnT family toxin K09803 K09803; uncharacterized protein D E3U44_01915 HrgA protein K09805 K09805; uncharacterized protein D E3U44_04795 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D E3U44_03005 UPF0149 family protein K09895 K09895; uncharacterized protein D E3U44_14605 N-acetyltransferase K09919 K09919; uncharacterized protein D E3U44_04845 DUF484 family protein K09921 K09921; uncharacterized protein D E3U44_01550 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D E3U44_18855 glycosyltransferase K09931 K09931; uncharacterized protein D E3U44_18825 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein D E3U44_03640 DUF4912 domain-containing protein K09942 K09942; uncharacterized protein D E3U44_10395 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein D E3U44_09460 DUF1318 domain-containing protein K09978 K09978; uncharacterized protein D E3U44_09645 hypothetical protein K09981 K09981; uncharacterized protein D E3U44_07360 nucleoside-diphosphate sugar epimerase K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 29, 2024