+F Repair protein KO #

  DNA Repair and Recombination Proteins - Oleispira antarctica

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AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D OLEAN_C21990 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E OLEAN_C23760 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E OLEAN_C03400 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E OLEAN_C30500 nth; DNA-(Apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D OLEAN_C29970 mutT; Mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D OLEAN_C38510 dut; Deoxyuridine 5\'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D OLEAN_C07110 Aminoacyl-tRNA synthetase, class I family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D OLEAN_C21990 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D OLEAN_C05430 Deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] C BER (base exicision repair) D DNA glycosylases E OLEAN_C23760 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E OLEAN_C03400 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E OLEAN_C38460 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E OLEAN_C30500 nth; DNA-(Apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E OLEAN_C19190 xthA; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] E OLEAN_C38570 Exonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D RecJ E OLEAN_C25590 recJ; Single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNA ligase E OLEAN_C23000 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E OLEAN_C00340 polA; probable DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E OLEAN_C02720 uvrA; UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) K03701 uvrA; excinuclease ABC subunit A E OLEAN_C14190 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B E OLEAN_C18850 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C E OLEAN_C10610 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E OLEAN_C38910 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E OLEAN_C00340 polA; probable DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] E OLEAN_C23000 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F OLEAN_C02370 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F OLEAN_C02380 rpoC; DNA-directed RNA polymerase subunit beta\' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F OLEAN_C02690 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F OLEAN_C38600 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F OLEAN_C15440 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors E OLEAN_C28280 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Molecular matchmaker E OLEAN_C35750 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D Strand discrimination factor D DNA exonucleases E OLEAN_C21650 sbcB; Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] E OLEAN_C28930 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] E OLEAN_C36080 Exodeoxyribonuclease VII, small subunit, probable K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DNA polymerase III holoenzyme E OLEAN_C10050 dnaE; DNA-directed DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E OLEAN_C00020 dnaN; DNA-directed DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E OLEAN_C11840 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] E OLEAN_C33000 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E OLEAN_C19960 holB; probable DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E OLEAN_C13430 polC; DNA polymerase III, alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E OLEAN_C20430 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E OLEAN_C27460 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E OLEAN_C38140 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E OLEAN_C21120 dnaX; DNA-directed DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E OLEAN_C23000 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E OLEAN_C10610 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E OLEAN_C38910 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E OLEAN_C02750 ssb; similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein E OLEAN_C25120 Single-strand binding family protein K03111 ssb; single-strand DNA-binding protein B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E OLEAN_C23550 recB; Exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] E OLEAN_C23560 recC; Exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] E OLEAN_C23540 recD; Exonuclease V alpha-subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] E OLEAN_C28270 recA; Protein RecA (Recombinase A) K03553 recA; recombination protein RecA E OLEAN_C25380 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E OLEAN_C25370 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E OLEAN_C25390 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] E OLEAN_C35940 priA; Primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] E OLEAN_C21650 sbcB; Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] E OLEAN_C15390 sbcC; Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 E OLEAN_C15380 sbcD; Exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D RecFOR pathway proteins E OLEAN_C28270 recA; Protein RecA (Recombinase A) K03553 recA; recombination protein RecA E OLEAN_C34200 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms E OLEAN_C00030 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF E OLEAN_C38650 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E OLEAN_C25590 recJ; Single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] E OLEAN_C14640 recO; DNA repair protein RecO (Recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O) E OLEAN_C21100 recR; Recombination protein RecR K06187 recR; recombination protein RecR E OLEAN_C06830 recN; DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N) E OLEAN_C25380 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E OLEAN_C25370 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E OLEAN_C25390 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AddAB pathway proteins D Other HR factor E OLEAN_C15810 Type III restriction family enzyme, res subunit K19789 radD; DNA repair protein RadD D Archaeal homologous recombinant proteins E OLEAN_C15390 sbcC; Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 E OLEAN_C15380 sbcD; Exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F OLEAN_C13890 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F OLEAN_C00040 gyrB; DNA gyrase B, DNA topoisomerase (ATP-hydrolysing),type IIA, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F OLEAN_C15260 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor F OLEAN_C38710 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha F OLEAN_C20490 Putative bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F OLEAN_C25590 recJ; Single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F OLEAN_C14640 recO; DNA repair protein RecO (Recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O) F OLEAN_C21100 recR; Recombination protein RecR K06187 recR; recombination protein RecR F OLEAN_C23000 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator F OLEAN_C06080 Factor for inversion stimulation Fis, transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein F OLEAN_C13780 ihfA; Integration host factor subunit alpha (IHF-alpha) K04764 ihfA; integration host factor subunit alpha F OLEAN_C13960 ihfB; probable Integration host factor subunit beta (IHF-beta) K05788 ihfB; integration host factor subunit beta E Supressor F OLEAN_C21650 sbcB; Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] F OLEAN_C17580 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F OLEAN_C21590 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F OLEAN_C02720 uvrA; UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) K03701 uvrA; excinuclease ABC subunit A F OLEAN_C14190 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D OLEAN_C09760 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] C Other SOS response factors D OLEAN_C28270 recA; Protein RecA (Recombinase A) K03553 recA; recombination protein RecA D OLEAN_C16960 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D OLEAN_C06830 recN; DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N) D OLEAN_C02010 polB; DNA-directed DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D OLEAN_C02750 ssb; similar to single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D OLEAN_C25120 Single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D OLEAN_C28260 recX; RecA regulator RecX K03565 recX; regulatory protein B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases D OLEAN_C37330 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D OLEAN_C20750 Helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] C Modulation of nucleotide pools D OLEAN_C29970 mutT; Mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D OLEAN_C38510 dut; Deoxyuridine 5\'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D OLEAN_C12600 nrdA__dnaF; Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D OLEAN_C22440 Ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D OLEAN_C12590 nrdB; Ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 29, 2025