+F Repair protein KO #

  DNA Repair and Recombination Proteins - Octadecabacter antarcticus

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D OAN307_c08720 putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D OAN307_c32570 phrB; deoxyribodipyrimidine photo-lyase PhrB K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D OAN307_c45090 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D OAN307_c45280 cytochrome/photolyase-like protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D OAN307_c45320 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E OAN307_c47140 mutY; A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E OAN307_c06540 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D OAN307_c08540 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D OAN307_c17390 putative NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D OAN307_c46650 putative mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D OAN307_c46990 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D OAN307_c38910 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D OAN307_c08720 putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D OAN307_c06530 putative AraC family transcriptional regulator K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D OAN307_c32570 phrB; deoxyribodipyrimidine photo-lyase PhrB K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D OAN307_c45090 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D OAN307_c45280 cytochrome/photolyase-like protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D OAN307_c45320 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D OAN307_c38250 putative photolyase-like protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D OAN307_c46560 alkB2; putative alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] C BER (base exicision repair) D DNA glycosylases E OAN307_c01970 uracil DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E OAN307_c22680 HhH-GPD superfamily base excision DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E OAN307_c47140 mutY; A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E OAN307_c01580 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] E OAN307_c48760 mutM; formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E OAN307_c06540 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E OAN307_c27500 putative exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] E OAN307_c47460 putative exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D RecJ E OAN307_c11170 putative single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNA ligase E OAN307_c23890 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E OAN307_c06630 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E OAN307_c28570 uvrA; uvrABC system protein A K03701 uvrA; excinuclease ABC subunit A E OAN307_c40230 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B E OAN307_c01540 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C E OAN307_c11770 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E OAN307_c06630 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] E OAN307_c23890 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F OAN307_c44390 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F OAN307_c44380 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F OAN307_c43920 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F OAN307_c02930 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F OAN307_c24100 mfd; transcription-repair-coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors E OAN307_c47900 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Molecular matchmaker E OAN307_c46060 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Strand discrimination factor D DNA exonucleases E OAN307_c15220 xseA; exodeoxyribonuclease 7 large subunit XseA K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] E OAN307_c45740 xseB; exodeoxyribonuclease 7 small subunit XseB K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DNA polymerase III holoenzyme E OAN307_c37840 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E OAN307_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E OAN307_c27150 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] E OAN307_c47350 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E OAN307_c35580 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E OAN307_c18860 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E OAN307_c48050 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E OAN307_c05820 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E OAN307_c23890 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E OAN307_c11770 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E OAN307_c23600 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E OAN307_c08020 RecD/TraA-family helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] E OAN307_c35900 recA; protein RecA K03553 recA; recombination protein RecA E OAN307_c08840 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E OAN307_c08850 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E OAN307_c08830 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] E OAN307_c08780 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D RecFOR pathway proteins E OAN307_c35900 recA; protein RecA K03553 recA; recombination protein RecA E OAN307_c21410 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms E OAN307_c00030 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF E OAN307_c23900 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E OAN307_c11170 putative single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] E OAN307_c03050 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) E OAN307_c05800 recR; recombination protein RecR K06187 recR; recombination protein RecR E OAN307_c12100 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) E OAN307_c08840 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA E OAN307_c08850 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E OAN307_c08830 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AddAB pathway proteins E OAN307_c48150 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] E OAN307_c48160 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Other HR factor D Archaeal homologous recombinant proteins E OAN307_c23540 hypothetical protein DUF853 K06915 herA; DNA double-strand break repair helicase HerA and related ATPase C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F OAN307_c23950 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F OAN307_c00040 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F OAN307_c38610 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor F OAN307_c01230 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F OAN307_c11170 putative single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F OAN307_c03050 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) F OAN307_c05800 recR; recombination protein RecR K06187 recR; recombination protein RecR F OAN307_c23890 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator F OAN307_c27370 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha F OAN307_c39500 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta E Supressor F OAN307_c47770 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F OAN307_c28570 uvrA; uvrABC system protein A K03701 uvrA; excinuclease ABC subunit A F OAN307_c40230 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B F OAN307_c30170 histone-like nucleoid-structuring family protein K03746 hns; DNA-binding protein H-NS F OAN307_c36490 histone-like H-NS family protein K03746 hns; DNA-binding protein H-NS F OAN307_c41390 histone-like nucleoid-structuring family protein K03746 hns; DNA-binding protein H-NS F OAN307_c45560 histone-like H-NS family protein K03746 hns; DNA-binding protein H-NS B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D OAN307_c25500 putative DNA-repair polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D OAN307_c45880 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D OAN307_c26960 umuC2; UV inducable DNA polymerase K03502 umuC; DNA polymerase V D OAN307_c44680 umuC3; UV inducable DNA polymerase K03502 umuC; DNA polymerase V D OAN307_c19010 umuD1; UV-repair and mutation protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D OAN307_c19560 umuD2; UV-repair and mutation protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D OAN307_c19940 umuD3; UV-repair and mutation protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D OAN307_c26970 umuD4; UV-repair and mutation protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D OAN307_c37590 umuD5; UV-repair and mutation protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D OAN307_c37710 peptidase S24 family protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D OAN307_c44690 umuD6; UV-repair and mutation protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] C Other SOS response factors D OAN307_c35900 recA; protein RecA K03553 recA; recombination protein RecA D OAN307_c22080 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D OAN307_c12100 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D OAN307_c16770 hypothetical protein K14160 imuA; protein ImuA D OAN307_c16760 imuB; putative protein ImuB K14161 imuB; protein ImuB D OAN307_c16750 dnaE2; DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D OAN307_c23600 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases D OAN307_c18800 hypothetical protein K03658 helD; DNA helicase IV [EC:5.6.2.4] D OAN307_c09000 putative DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] C Modulation of nucleotide pools D OAN307_c08540 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D OAN307_c17390 putative NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D OAN307_c46650 putative mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D OAN307_c46990 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D OAN307_c38910 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D OAN307_c20720 putative vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D OAN307_c22330 nrdJ; vitamin B12-dependent ribonucleotide reductase NrdJ K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D OAN307_c37770 putative vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 29, 2025