+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Oryza brachyantha (malo sina)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 102712055 mRNA cap guanine-N7 methyltransferase 2 isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 102713294 mRNA cap guanine-N7 methyltransferase 1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 102702516 mRNA-capping enzyme-like K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 102700564 mRNA-capping enzyme-like K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 102704982 cyclin-dependent kinase D-1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
D Cap binding complex
E 102709543 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 102705879 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 102700616 pre-mRNA cleavage factor Im 25 kDa subunit 2 isoform X1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 102700545 pre-mRNA cleavage factor Im 25 kDa subunit 1-like K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 102719422 death-inducer obliterator 1-like K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 102719697 translation initiation factor IF-2-like K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 102719269 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 102714952 uncharacterized protein LOC102714952 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 102714667 polyadenylation and cleavage factor homolog 4-like K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 102721072 probable cleavage and polyadenylation specificity factor subunit 1 isoform X2 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 102719146 cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 102719189 cleavage and polyadenylation specificity factor subunit 3-I K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 102710602 zinc finger CCCH domain-containing protein 45 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 102709526 flowering time control protein FY K15542 PFS2; polyadenylation factor subunit 2
E 102705629 protein ANTHESIS POMOTING FACTOR 1 K14962 WDR82; COMPASS component SWD2
E 102721750 protein ANTHESIS POMOTING FACTOR 1 K14962 WDR82; COMPASS component SWD2
E 102715618 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102699376 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102705703 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102713468 serine/threonine-protein phosphatase PP1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102703235 serine/threonine-protein phosphatase PP1 isozyme 3-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102717015 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 102714242 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 102718639 cleavage stimulation factor subunit 50 K14406 CSTF1; cleavage stimulation factor subunit 1
E 102721492 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2
E 102701004 cleavage stimulating factor 64-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 102712220 cleavage stimulation factor subunit 77 isoform X3 K14408 CSTF3; cleavage stimulation factor subunit 3
E 102714049 uncharacterized protein LOC102714049 isoform X2 K06100 SYMPK; symplekin
E 102701841 symplekin K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 107304583 small nuclear ribonucleoprotein-associated protein B-like K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 102699653 small nuclear ribonucleoprotein SmD3b-like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 102722096 small nuclear ribonucleoprotein SmD3b-like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 102717213 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 102709584 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 102709142 probable small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 102719469 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 102709189 U6 snRNA-associated Sm-like protein LSm7 K11099 SNRPG; small nuclear ribonucleoprotein G
E 102719146 cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 102719189 cleavage and polyadenylation specificity factor subunit 3-I K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 102721492 cleavage stimulating factor 64 K14407 CSTF2; cleavage stimulation factor subunit 2
E 102701004 cleavage stimulating factor 64-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 102714049 uncharacterized protein LOC102714049 isoform X2 K06100 SYMPK; symplekin
E 102701841 symplekin K06100 SYMPK; symplekin
D DRB sensitivity inducing factor (DSIF) complex
E 102718191 transcription elongation factor SPT4 homolog 2-like K15171 SUPT4H1; transcription elongation factor SPT4
E 102712450 putative transcription elongation factor SPT5 homolog 1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 102715647 probable N6-adenosine-methyltransferase MT-A70-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 102704187 N6-adenosine-methyltransferase non-catalytic subunit MTB K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 102710182 RNA N6-adenosine-methyltransferase mettl16 isoform X1 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 102719592 FKBP12-interacting protein of 37 kDa K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 102703342 E3 ubiquitin-protein ligase HAKAI homolog K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 102700116 nuclear poly(A) polymerase 4-like isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 102699957 nuclear poly(A) polymerase 2-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 102720246 nuclear poly(A) polymerase 4 isoform X2 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 102699605 nuclear poly(A) polymerase 3 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 102712724 nuclear poly(A) polymerase 1-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
D Negative regulators of mRNA 3' end processing
E 102701266 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 102705916 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 102704508 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
E 102713460 zinc finger CCCH domain-containing protein 27 isoform X1 K13192 RBM26; RNA-binding protein 26
E 102710594 RNA demethylase ALKBH10B isoform X1 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 102721844 RNA demethylase ALKBH9B isoform X2 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
C Other processing factors
D 102719834 KIN17-like protein K13102 KIN; DNA/RNA-binding protein KIN17
D 102708533 methyltransferase-like protein 22 isoform X1 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 102702110 serrate RNA effector molecule-like K27103 SRRT; serrate RNA effector molecule
D 102720823 serrate RNA effector molecule-like K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 102707300 RNA-binding protein Y14B isoform X2 K12876 RBM8A; RNA-binding protein 8A
E 102708245 RNA-binding protein Y14A K12876 RBM8A; RNA-binding protein 8A
E 102716187 protein mago nashi homolog 2 K12877 MAGOH; protein mago nashi
E 102712176 THO complex subunit 4D K12881 THOC4; THO complex subunit 4
E 102708912 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 102710610 THO complex subunit 4D-like isoform X2 K12881 THOC4; THO complex subunit 4
E 102705131 LOW QUALITY PROTEIN: THO complex subunit 4B-like K12881 THOC4; THO complex subunit 4
E 102707387 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 102708474 DEAD-box ATP-dependent RNA helicase 15 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 102708189 DEAD-box ATP-dependent RNA helicase 15-like K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 102700751 eukaryotic initiation factor 4A-III homolog A K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 102716302 eukaryotic initiation factor 4A-III homolog A-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 102712776 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 102708141 pinin K13114 PNN; pinin
E 102705892 fibrous sheath CABYR-binding protein-like K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 102719029 uncharacterized protein LOC102719029 isoform X2 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 102715640 serine/arginine-rich splicing factor SR45-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 102707494 serine/arginine-rich splicing factor SR45-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 102708597 serine/arginine repetitive matrix protein 1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 102706637 THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 102707645 THO complex subunit 2 isoform X2 K12879 THOC2; THO complex subunit 2
E 102703894 THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 102712176 THO complex subunit 4D K12881 THOC4; THO complex subunit 4
E 102708912 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 102710610 THO complex subunit 4D-like isoform X2 K12881 THOC4; THO complex subunit 4
E 102705131 LOW QUALITY PROTEIN: THO complex subunit 4B-like K12881 THOC4; THO complex subunit 4
E 102707387 THO complex subunit 4A-like K12881 THOC4; THO complex subunit 4
E 102714075 THO complex subunit 5A isoform X2 K13174 THOC5; THO complex subunit 5
E 102705943 THO complex subunit 6 isoform X1 K13175 THOC6; THO complex subunit 6
E 102719978 THO complex subunit 7B-like isoform X1 K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 102704640 enhanced ethylene response protein 5 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 107303488 LOW QUALITY PROTEIN: probable 26S proteasome complex subunit sem1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 102707814 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 102705678 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 102712427 SAC3 family protein C K23719 SAC3; nuclear mRNA export protein SAC3
E 102709948 SAC3 family protein B isoform X1 K23719 SAC3; nuclear mRNA export protein SAC3
D Nuclear pore complex
E 102701798 nuclear-pore anchor K09291 TPR; nucleoprotein TPR
E 102722435 protein RAE1-like K14298 RAE1; mRNA export factor
E 102706216 protein RAE1-like K14298 RAE1; mRNA export factor
E 102700680 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 102702628 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 102722102 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 102700073 protein transport protein SEC13 homolog B-like K14004 SEC13; protein transport protein SEC13
E 102709703 nuclear pore complex protein NUP85 K14304 NUP85; nuclear pore complex protein Nup85
E 102700548 nuclear pore complex protein NUP43 K14305 NUP43; nuclear pore complex protein Nup43
E 102710799 nuclear pore complex protein NUP54 K14308 NUP54; nuclear pore complex protein Nup54
E 102719630 nuclear pore complex protein NUP62 K14306 NUP62; nuclear pore complex protein Nup62
E 102709738 nuclear pore complex protein NUP88 K14318 NUP88; nuclear pore complex protein Nup88
E 102722663 nuclear pore complex protein NUP93A-like K14309 NUP93; nuclear pore complex protein Nup93
E 102702327 nuclear pore complex protein NUP98A-like isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 102703287 nuclear pore complex protein NUP96 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 102711851 nuclear pore complex protein NUP98A K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 102706333 nuclear pore complex protein NUP107 K14301 NUP107; nuclear pore complex protein Nup107
E 102709727 nuclear pore complex protein NUP133 isoform X1 K14300 NUP133; nuclear pore complex protein Nup133
E 102721481 uncharacterized protein LOC102721481 isoform X1 K14311 NUP188; nuclear pore complex protein Nup188
E 102706454 nuclear pore complex protein NUP155 K14312 NUP155; nuclear pore complex protein Nup155
E 102703937 nuclear pore complex protein NUP160 K14303 NUP160; nuclear pore complex protein Nup160
E 102703355 nuclear pore complex protein NUP35 K14313 NUP35; nuclear pore complex protein Nup53
E 121054506 nuclear pore complex protein NUP35-like K14313 NUP35; nuclear pore complex protein Nup53
E 102699288 nuclear pore complex protein NUP205 K14310 NUP205; nuclear pore complex protein Nup205
E 102705559 nuclear pore complex protein GP210 K14314 NUP210; nuclear pore complex protein Nup210
E 102712099 nuclear pore complex protein NUP214 K14317 NUP214; nuclear pore complex protein Nup214
E 102709307 nuclear pore complex protein NUP58 K14307 NUPL1; nucleoporin p58/p45
E 102710991 zinc finger CCCH domain-containing protein 46 isoform X1 K14321 NUPL2; nucleoporin-like protein 2
E 102715823 uncharacterized protein LOC102715823 K14315 NDC1; nucleoporin NDC1
E 102714145 protein SEH1 K14299 SEH1; nucleoporin SEH1
E 102717022 aladin-like K14320 AAAS; aladin
E 102710246 aladin K14320 AAAS; aladin
E 102716933 protein GLE1 K18723 GLE1; nucleoporin GLE1
D Ran-mediated transport factors
E 102709464 GTP-binding nuclear protein Ran-2 K07936 RAN; GTP-binding nuclear protein Ran
E 102712713 acidic leucine-rich nuclear phosphoprotein 32-related protein 2-like K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 102704452 plant UBX domain-containing protein 10 K18726 FAF2; FAS-associated factor 2
E 102700928 plant UBX domain-containing protein 10-like K18726 FAF2; FAS-associated factor 2
E 102707752 cell division control protein 48 homolog E-like K13525 VCP; transitional endoplasmic reticulum ATPase
E 102700464 cell division cycle protein 48 homolog K13525 VCP; transitional endoplasmic reticulum ATPase
E 102720959 protein N-lysine methyltransferase METTL21A K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 102699488 protein EXPORTIN 1A-like K14290 XPO1; exportin-1
E 102712204 exportin-7-A isoform X1 K18460 XPO7; exportin-7
E 102703398 RAN GTPase-activating protein 2-like K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E 107303964 eukaryotic translation initiation factor 4E-1 K03259 EIF4E; translation initiation factor 4E
E 102720775 eukaryotic translation initiation factor NCBP K03259 EIF4E; translation initiation factor 4E
E 107305069 eukaryotic translation initiation factor K03259 EIF4E; translation initiation factor 4E
E 102709429 eukaryotic initiation factor 4A-3 K03257 EIF4A; translation initiation factor 4A
E 102708498 LOW QUALITY PROTEIN: ATP-dependent RNA helicase DRS1-like K03257 EIF4A; translation initiation factor 4A
E 102706484 eukaryotic initiation factor 4A-1 K03257 EIF4A; translation initiation factor 4A
E 102706539 eukaryotic translation initiation factor-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 102720157 zinc finger CCCH domain-containing protein 43-like K03260 EIF4G; translation initiation factor 4G
E 102719876 LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 43-like K03260 EIF4G; translation initiation factor 4G
E 102721463 eukaryotic translation initiation factor 4G isoform X1 K03260 EIF4G; translation initiation factor 4G
E 102722012 eukaryotic translation initiation factor K03260 EIF4G; translation initiation factor 4G
E 102700599 protein PIR K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102711439 DEAD-box ATP-dependent RNA helicase 52A-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102718816 DEAD-box ATP-dependent RNA helicase 37 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102709661 DEAD-box ATP-dependent RNA helicase 52B K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102714786 DEAD-box ATP-dependent RNA helicase 52C K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102713792 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 102721671 30S ribosomal protein 2, chloroplastic K13126 PABPC; polyadenylate-binding protein
E 102707949 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 102709841 uncharacterized protein LOC102709841 K13126 PABPC; polyadenylate-binding protein
E 102719615 polyadenylate-binding protein 8-like K13126 PABPC; polyadenylate-binding protein
E 102722602 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 102717124 DExH-box ATP-dependent RNA helicase DExH11 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 102705295 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence
E 102702886 translation machinery-associated protein 22 K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
D Other transport factors
E 102720215 partner of Y14 and mago isoform X1 K14294 WIBG; partner of Y14 and mago
E 102722542 RNA-binding protein P-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102709603 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102708774 glycine-rich RNA-binding protein 3, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102701520 UBP1-associated protein 2B-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102720068 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102716069 glycine-rich RNA-binding protein 2-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102701775 glycine-rich RNA-binding protein blt801 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102700138 UBP1-associated protein 2B-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102700111 RNA-binding protein 1-like K14411 MSI; RNA-binding protein Musashi
E 102706894 RNA-binding protein Musashi homolog 2-like K14411 MSI; RNA-binding protein Musashi
E 102718569 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi
E 102709078 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1 K14411 MSI; RNA-binding protein Musashi
E 102699326 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 102707533 heterogeneous nuclear ribonucleoprotein 1 K14411 MSI; RNA-binding protein Musashi
E 102718586 heterogeneous nuclear ribonucleoprotein 1-like K14411 MSI; RNA-binding protein Musashi
E 102719666 HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein
E 102702748 HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 102719665 protein PELOTA 1 K06965 PELO; protein pelota
E 102713444 polyadenylate-binding protein 2-like isoform X2 K14396 PABPN1; polyadenylate-binding protein 2
E 102718843 polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 102712970 DEAD-box ATP-dependent RNA helicase 38 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 102712920 pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 102699668 protein MODIFIER OF SNC1 11 isoform X1 K18732 SARNP; SAP domain-containing ribonucleoprotein
E 102722815 SAC3 family protein A isoform X2 K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E 102702146 eukaryotic peptide chain release factor subunit 1-2-like K03265 ETF1; peptide chain release factor subunit 1
E 102707587 eukaryotic peptide chain release factor subunit 1-2-like K03265 ETF1; peptide chain release factor subunit 1
E 102703293 eukaryotic peptide chain release factor subunit 1-3 K03265 ETF1; peptide chain release factor subunit 1
E 102716176 eukaryotic peptide chain release factor subunit 1-3-like K03265 ETF1; peptide chain release factor subunit 1
E 121055722 eukaryotic peptide chain release factor subunit 1-3-like K03265 ETF1; peptide chain release factor subunit 1
E 102712798 eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3
E 102700817 LOW QUALITY PROTEIN: regulator of nonsense transcripts 1 homolog K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 102721707 regulator of nonsense transcripts UPF2 K14327 UPF2; regulator of nonsense transcripts 2
E 102717790 regulator of nonsense transcripts UPF3 isoform X2 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 102704591 serine/threonine-protein phosphatase PP2A-3 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 102719093 serine/threonine-protein phosphatase PP2A-2 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 102721344 serine/threonine-protein phosphatase PP2A-4 catalytic subunit-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 102722026 serine/threonine-protein phosphatase PP2A-1 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 102713770 serine/threonine-protein phosphatase PP2A-4 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 102708461 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 102701115 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102721423 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102716424 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102711224 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102713879 serine/threonine protein phosphatase 2A regulatory subunit B''beta-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 102714647 probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 102722050 probable serine/threonine protein phosphatase 2A regulatory subunit B''delta K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 102713672 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102710287 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102719097 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102713084 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102708995 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102704882 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102699610 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102717826 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 102708047 serine/threonine-protein kinase SMG1-like K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 102718668 protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 102705408 uncharacterized protein LOC102705408 K18734 SMG8; protein SMG8
E 102720249 protein SMG9-like isoform X1 K18735 SMG9; protein SMG9
E 102713792 protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
C Factors involved in mRNA localization
D Cargo complex
E 102719576 pumilio homolog 24 K14844 PUF6; pumilio homology domain family member 6
E 102700226 myosin-6-like isoform X1 K10357 MYO5; myosin V
E 102717050 myosin-12 K10357 MYO5; myosin V
E 102718712 myosin-8-like K10357 MYO5; myosin V
E 102709147 protein OPAQUE1 K10357 MYO5; myosin V
E 102711319 LOW QUALITY PROTEIN: myosin-8-like K10357 MYO5; myosin V
E 102713089 myosin-9-like isoform X2 K10357 MYO5; myosin V
E 102707596 myosin-11-like K10357 MYO5; myosin V
E 102701839 myosin-1 isoform X2 K10357 MYO5; myosin V
E 102716201 myosin-17-like K10357 MYO5; myosin V
E 102710346 myosin-17-like isoform X1 K10357 MYO5; myosin V
E 102707155 protein OPAQUE1 isoform X1 K10357 MYO5; myosin V
E 102701212 uncharacterized protein LOC102701212 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
D Trans-acting binding proteins
E 102709905 far upstream element-binding protein 2 K13210 FUBP; far upstream element-binding protein
E 102714579 far upstream element-binding protein 2-like K13210 FUBP; far upstream element-binding protein
E 102703366 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 102707655 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 102707380 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 102720301 elongation factor 1-gamma 2 K03233 EEF1G; elongation factor 1-gamma
E 102701362 elongation factor 1-gamma 3 K03233 EEF1G; elongation factor 1-gamma
D Other mRNA localization factors
E 102700599 protein PIR K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102716058 KH domain-containing protein At4g18375 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102712456 RNA-binding KH domain-containing protein RCF3 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102707903 RNA-binding KH domain-containing protein RCF3-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102715357 flowering locus K homology domain K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102710053 RNA-binding KH domain-containing protein RCF3-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102699540 RNA-binding KH domain-containing protein PEPPER K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102715736 RNA-binding KH domain-containing protein PEPPER-like isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102703946 KH domain-containing protein HEN4 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102717823 KH domain-containing protein HEN4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 102719661 protein argonaute 12-like isoform X2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102717610 protein argonaute 4B K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102707555 protein argonaute 1A-like isoform X3 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102715301 protein argonaute 2-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102714812 protein argonaute 1A isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102715094 protein argonaute 1A-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102709940 protein argonaute PNH1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102709600 protein argonaute 4A K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102722760 protein argonaute MEL1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102710856 protein argonaute 7 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102707470 protein argonaute 1C K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102700615 protein argonaute 1B isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102709858 protein argonaute 14-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102704716 protein argonaute 18-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102706294 protein argonaute 1D K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102701656 protein argonaute 16 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 107303964 eukaryotic translation initiation factor 4E-1 K03259 EIF4E; translation initiation factor 4E
E 102720775 eukaryotic translation initiation factor NCBP K03259 EIF4E; translation initiation factor 4E
E 107305069 eukaryotic translation initiation factor K03259 EIF4E; translation initiation factor 4E
E 102700817 LOW QUALITY PROTEIN: regulator of nonsense transcripts 1 homolog K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 102711439 DEAD-box ATP-dependent RNA helicase 52A-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102718816 DEAD-box ATP-dependent RNA helicase 37 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102709661 DEAD-box ATP-dependent RNA helicase 52B K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102714786 DEAD-box ATP-dependent RNA helicase 52C K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102722952 DEAD-box ATP-dependent RNA helicase 6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 102709777 DEAD-box ATP-dependent RNA helicase 12 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 102718697 protein decapping 5-like K18749 LSM14; protein LSM14
E 102703974 protein decapping 5-like K18749 LSM14; protein LSM14
E 102714353 probable RNA helicase SDE3 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 102719294 transportin-1 K18752 TNPO1; transportin-1
E 102708047 serine/threonine-protein kinase SMG1-like K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 102718668 protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 102722480 putative zinc finger CCCH domain-containing protein 21 K18753 ZFP36L; butyrate response factor
E 102722542 RNA-binding protein P-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102709603 UBP1-associated protein 2C K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102708774 glycine-rich RNA-binding protein 3, mitochondrial-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102701520 UBP1-associated protein 2B-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102720068 heterogeneous nuclear ribonucleoprotein 1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102716069 glycine-rich RNA-binding protein 2-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102701775 glycine-rich RNA-binding protein blt801 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102700138 UBP1-associated protein 2B-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102711600 la-related protein 1B-like isoform X1 K18757 LARP1; la-related protein 1
E 102722819 la-related protein 1A isoform X1 K18757 LARP1; la-related protein 1
E 102716398 pollen-specific leucine-rich repeat extensin-like protein 3 K18757 LARP1; la-related protein 1
E 102705840 la-related protein 1B K18757 LARP1; la-related protein 1
D P-body specific factors
E 107303562 mRNA-decapping enzyme subunit 2 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 102700635 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 102710919 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 102708667 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 102722007 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 102714310 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 102706052 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 102716642 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 102714457 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 102709709 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 102711524 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 102706674 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 102702287 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 102700226 myosin-6-like isoform X1 K10357 MYO5; myosin V
E 102717050 myosin-12 K10357 MYO5; myosin V
E 102718712 myosin-8-like K10357 MYO5; myosin V
E 102709147 protein OPAQUE1 K10357 MYO5; myosin V
E 102711319 LOW QUALITY PROTEIN: myosin-8-like K10357 MYO5; myosin V
E 102713089 myosin-9-like isoform X2 K10357 MYO5; myosin V
E 102707596 myosin-11-like K10357 MYO5; myosin V
E 102701839 myosin-1 isoform X2 K10357 MYO5; myosin V
E 102716201 myosin-17-like K10357 MYO5; myosin V
E 102710346 myosin-17-like isoform X1 K10357 MYO5; myosin V
E 102707155 protein OPAQUE1 isoform X1 K10357 MYO5; myosin V
E 102717781 tubulin alpha-2 chain-like K07374 TUBA; tubulin alpha
E 102703378 beta-hexosaminidase 2 K07374 TUBA; tubulin alpha
E 102720966 tubulin alpha-1 chain K07374 TUBA; tubulin alpha
E 102699486 tubulin alpha-1 chain K07374 TUBA; tubulin alpha
E 102713379 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 102710062 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 102707524 CCR4-NOT transcription complex subunit 1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 102699476 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 102704979 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 102715562 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 102722561 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 102710340 uncharacterized protein LOC102710340 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 102708769 uncharacterized protein LOC102708769 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 121055724 uncharacterized protein LOC121055724 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 102720028 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102719658 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102715112 carbon catabolite repressor protein 4 homolog 4 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102722835 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102715123 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102703318 probable CCR4-associated factor 1 homolog 9 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102711530 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102705730 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102705592 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102716252 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102717932 probable CCR4-associated factor 1 homolog 9 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102719606 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102714038 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102709248 DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 102701783 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 102708771 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 102700029 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 102702254 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4
E 102721707 regulator of nonsense transcripts UPF2 K14327 UPF2; regulator of nonsense transcripts 2
E 102717790 regulator of nonsense transcripts UPF3 isoform X2 K14328 UPF3; regulator of nonsense transcripts 3
E 102719957 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 102717328 YTH domain-containing protein ECT4-like isoform X2 K20102 YTHDF; YTH domain-containing family protein
E 102719102 YTH domain-containing protein ECT1-like isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 102707720 YTH domain-containing protein ECT2 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 102707011 YTH domain-containing protein ECT4-like isoform X1 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 102708914 oligouridylate-binding protein 1-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 102720169 RNA-binding protein 208 K13201 TIA1; nucleolysin TIA-1/TIAR
E 102702609 oligouridylate-binding protein 1B-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 102721671 30S ribosomal protein 2, chloroplastic K13126 PABPC; polyadenylate-binding protein
E 102707949 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 102709841 uncharacterized protein LOC102709841 K13126 PABPC; polyadenylate-binding protein
E 102719615 polyadenylate-binding protein 8-like K13126 PABPC; polyadenylate-binding protein
E 102722602 polyadenylate-binding protein 2-like K13126 PABPC; polyadenylate-binding protein
E 102713983 nuclear transport factor 2-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 102705616 nuclear transport factor 2 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 102700304 eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A
E 102717653 eukaryotic translation initiation factor 3 subunit B-like K03253 EIF3B; translation initiation factor 3 subunit B
E 102709429 eukaryotic initiation factor 4A-3 K03257 EIF4A; translation initiation factor 4A
E 102708498 LOW QUALITY PROTEIN: ATP-dependent RNA helicase DRS1-like K03257 EIF4A; translation initiation factor 4A
E 102706484 eukaryotic initiation factor 4A-1 K03257 EIF4A; translation initiation factor 4A
E 102700751 eukaryotic initiation factor 4A-III homolog A K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 102716302 eukaryotic initiation factor 4A-III homolog A-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 102706539 eukaryotic translation initiation factor-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 102720157 zinc finger CCCH domain-containing protein 43-like K03260 EIF4G; translation initiation factor 4G
E 102719876 LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 43-like K03260 EIF4G; translation initiation factor 4G
E 102721463 eukaryotic translation initiation factor 4G isoform X1 K03260 EIF4G; translation initiation factor 4G
E 102722012 eukaryotic translation initiation factor K03260 EIF4G; translation initiation factor 4G
E 102720091 guanine nucleotide-binding protein subunit beta-like protein A K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 102710875 guanine nucleotide-binding protein subunit beta-like protein B K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 102713922 histone deacetylase 15-like K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 102711579 tudor domain-containing protein 3 isoform X2 K18404 TDRD3; tudor domain-containing protein 3
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 102700635 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 102710919 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 102708667 mRNA-decapping enzyme-like protein K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 107303562 mRNA-decapping enzyme subunit 2 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 102722952 DEAD-box ATP-dependent RNA helicase 6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 102709777 DEAD-box ATP-dependent RNA helicase 12 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 102702254 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4
E 102701783 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 102708771 protein PAT1 homolog K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 102700029 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 102722007 sm-like protein LSM1B K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 102714310 sm-like protein LSM2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 102706052 sm-like protein LSM3A K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 102716642 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 102714457 sm-like protein LSM5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 102709709 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 102711524 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 102706674 sm-like protein LSM7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 102702287 sm-like protein LSM8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 102710165 5'-3' exoribonuclease 3 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 102718537 5'-3' exoribonuclease 4-like K20553 XRN4; 5'-3' exoribonuclease 4 [EC:3.1.13.-]
D Other 5'-3' decay factors
C 3'-5' decay
D Core exosome factors
E 102716014 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 102717759 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 102716822 putative exosome complex component rrp40 K03681 RRP40; exosome complex component RRP40
E 102704339 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41
E 102711914 exosome complex component RRP41 homolog isoform X1 K11600 RRP41; exosome complex component RRP41
E 102720312 exosome complex exonuclease RRP46 homolog K12590 RRP46; exosome complex component RRP46
E 102719888 exosome complex component RRP41-like K12587 MTR3; exosome complex component MTR3
E 102701679 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
E 102703800 exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 102712419 exosome complex component RRP45A-like isoform X2 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 102722563 exosome complex exonuclease RRP44 homolog A K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 102712702 protein RRP6-like 2 isoform X1 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 102718959 protein RRP6-like 2 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 102703607 nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 102714695 uncharacterized protein LOC102714695 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E 102717118 terminal nucleotidyltransferase 4B K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 102714969 DExH-box ATP-dependent RNA helicase DExH9 isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
E 102708098 DExH-box ATP-dependent RNA helicase DExH10 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 102717124 DExH-box ATP-dependent RNA helicase DExH11 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 102711380 tetratricopeptide repeat protein SKI3 K12600 SKI3; superkiller protein 3
E 102715151 WD repeat-containing protein VIP3 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 102720028 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102719658 carbon catabolite repressor protein 4 homolog 1-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102715112 carbon catabolite repressor protein 4 homolog 4 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102707524 CCR4-NOT transcription complex subunit 1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 102699476 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 102704979 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 102715562 probable NOT transcription complex subunit VIP2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 102722561 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 102710340 uncharacterized protein LOC102710340 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 102708769 uncharacterized protein LOC102708769 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 121055724 uncharacterized protein LOC121055724 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 102722835 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102715123 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102703318 probable CCR4-associated factor 1 homolog 9 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102711530 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102705730 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102705592 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102716252 probable CCR4-associated factor 1 homolog 11 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102717932 probable CCR4-associated factor 1 homolog 9 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102719606 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102714038 probable CCR4-associated factor 1 homolog 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102720681 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 102719273 cell differentiation protein rcd1-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 102699679 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 102699850 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 102719076 CCR4-NOT transcription complex subunit 10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
E 102710667 ABC transporter I family member 19-like K12608 CAF16; CCR4-NOT complex subunit CAF16
E 102706734 ABC transporter I family member 20 K12608 CAF16; CCR4-NOT complex subunit CAF16
D Pan complex
D Other 3'-5' decay factors
E 102701631 poly(A)-specific ribonuclease PARN K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 102719137 poly(A)-specific ribonuclease PARN-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 102706506 DExH-box ATP-dependent RNA helicase DExH3-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 102714446 DExH-box ATP-dependent RNA helicase DExH3 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 102700953 LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH6 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 102713676 ERI1 exoribonuclease 2-like K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 102712772 ERI1 exoribonuclease 2-like K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 102704214 nuclear exosome regulator NRDE2 K26109 NRDE2; nuclear exosome regulator NRDE2
E 102706690 protein RST1 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 102721237 oligoribonuclease-like isoform X2 K13288 orn; oligoribonuclease [EC:3.1.-.-]
E 102720318 oligoribonuclease-like K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
E 102716053 probable ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Other RNA degradosome components
E 102702734 cytosolic enolase 3 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 102710132 enolase 1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 102711291 enolase 1, chloroplastic K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 102702497 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 102711598 polyribonucleotide nucleotidyltransferase 2, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 102717354 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 102706889 ATP-dependent 6-phosphofructokinase 6-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102700095 ATP-dependent 6-phosphofructokinase 6-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102719110 ATP-dependent 6-phosphofructokinase 6-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102712812 ATP-dependent 6-phosphofructokinase 6-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102721849 ATP-dependent 6-phosphofructokinase 3-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102703031 ATP-dependent 6-phosphofructokinase 2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102722800 LOW QUALITY PROTEIN: ATP-dependent 6-phosphofructokinase 2-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102717733 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102713489 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102712113 ATP-dependent 6-phosphofructokinase 5, chloroplastic-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 102706075 heat shock 70 kDa protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 102707616 heat shock 70 kDa protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 102715025 chaperonin CPN60-like 2, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 102706270 chaperonin CPN60-1, mitochondrial-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 102705634 ruBisCO large subunit-binding protein subunit beta, chloroplastic K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 102708151 ruBisCO large subunit-binding protein subunit beta, chloroplastic-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 102709114 chaperonin CPN60-1, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 102717759 exosome complex component RRP4 homolog K03679 RRP4; exosome complex component RRP4
E 102716014 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 102704339 exosome complex component RRP41 homolog K11600 RRP41; exosome complex component RRP41
E 102711914 exosome complex component RRP41 homolog isoform X1 K11600 RRP41; exosome complex component RRP41
E 102701679 exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
D Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024