+F Repair protein KO
#
DNA Repair and Recombination Proteins - Olea europaea var. sylvestris (wild olive)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 111407184 DNA oxidative demethylase ALKBH2 isoform X1 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 111366591 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 111386562 deoxyribodipyrimidine photo-lyase isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 111406626 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 111380211 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 111393717 adenine DNA glycosylase isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 111370373 methyl-CpG-binding domain protein 4-like protein K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 111368138 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 111374665 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 111365382 DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 111366829 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 111399690 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
F 111368878 uncharacterized protein LOC111368878 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
F 111384517 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 111383059 DNA polymerase epsilon catalytic subunit A-like K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 111411186 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 111383078 DNA polymerase epsilon subunit 3-like K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F 111379511 DNA polymerase epsilon subunit 3 isoform X1 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 111407771 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 111383639 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 111393858 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 111384538 flap endonuclease 1 isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 111393964 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 111386701 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 111370004 DNA-repair protein XRCC1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 111389372 tyrosyl-DNA phosphodiesterase 1-like K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 111392531 LOW QUALITY PROTEIN: transcription factor bHLH140-like K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 111392550 transcription factor bHLH140-like K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 111395567 polynucleotide 3'-phosphatase ZDP isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 111403350 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 111373153 poly [ADP-ribose] polymerase 3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 111412386 poly [ADP-ribose] polymerase 2 isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 111401212 DNA repair protein RAD4 isoform X1 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 111372042 ubiquitin receptor RAD23b-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 111374807 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
F 111382791 ubiquitin receptor RAD23c-like K10839 RAD23; UV excision repair protein RAD23
F 111401040 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
F 111384050 ubiquitin receptor RAD23c-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 111384054 ubiquitin receptor RAD23c-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 111401926 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 111384856 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 111379972 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 111411455 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 111407267 cullin-4-like K10609 CUL4; cullin 4
F 111370937 cullin-4-like K10609 CUL4; cullin 4
F 111412234 cullin-4-like isoform X1 K10609 CUL4; cullin 4
F 111370491 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 111397877 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
F 111390752 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 111407459 uncharacterized protein LOC111407459 K15082 RAD7; DNA repair protein RAD7
F 111411580 uncharacterized protein LOC111411580 K15082 RAD7; DNA repair protein RAD7
F 111393448 DNA repair protein RAD16-like K15083 RAD16; DNA repair protein RAD16
F 111402510 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 111393446 DNA repair protein RAD16 isoform X1 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 111409453 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 111397987 DNA-directed RNA polymerase II subunit 1-like K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 111392901 DNA-directed RNA polymerase II subunit RPB2-like K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 111368560 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 111388026 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 111410140 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 111396903 DNA-directed RNA polymerases IV and V subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 111407192 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 111383073 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 111391163 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 111394374 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 111390294 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 111406087 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 111406088 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 111403888 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 111396769 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 111384444 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 111396677 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 111384224 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 111384228 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 111378734 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 111383700 DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 111384103 DNA-directed RNA polymerases II, IV and V subunit 9A isoform X1 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 111371519 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 111379720 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 111393414 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 111391966 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 111388870 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 111391589 DNA-directed RNA polymerases II, IV and V subunit 12-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 111370869 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 111395778 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 111384856 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 111379972 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 111411455 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 111407267 cullin-4-like K10609 CUL4; cullin 4
F 111370937 cullin-4-like K10609 CUL4; cullin 4
F 111412234 cullin-4-like isoform X1 K10609 CUL4; cullin 4
F 111370491 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 111397877 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
F 111390140 DNA excision repair protein ERCC-8-like K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 111402459 protein CHROMATIN REMODELING 8 isoform X1 K10841 ERCC6; DNA excision repair protein ERCC-6
F 111394726 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 111405969 DNA repair helicase XPB1 isoform X1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 111377352 DNA repair helicase XPD isoform X1 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 111402456 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 111392283 probable RNA polymerase II transcription factor B subunit 1-1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 111400172 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 111409371 RNA polymerase II transcription factor B subunit 4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 111377899 RNA polymerase II transcription factor B subunit 2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 111398484 RNA polymerase II transcription factor B subunit 5 isoform X1 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 111405240 cyclin-dependent kinase D-1-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 111401856 cyclin-dependent kinase D-1-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 111408067 cyclin-H1-1 K06634 CCNH; cyclin H
D RPA (replication factor A)
E 111387325 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 111372408 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 111368686 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 111375424 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 111404055 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D Other NER factors
E 111408404 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 111368077 DNA repair protein UVH3-like K10846 ERCC5; DNA excision repair protein ERCC-5
E 111393964 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 111386701 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 111377660 MMS19 nucleotide excision repair protein homolog K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 111379097 cullin-3A-like K03869 CUL3; cullin 3
E 111395577 cullin-3A-like K03869 CUL3; cullin 3
E 111403340 cullin-3B-like K03869 CUL3; cullin 3
E 111406836 cullin-3A-like K03869 CUL3; cullin 3
E 111405881 elongin-C-like K03872 ELOC; elongin-C
E 111399950 elongin-C-like isoform X1 K03872 ELOC; elongin-C
E 111399627 uncharacterized protein LOC111399627 isoform X1 K03873 ELOB; elongin-B
E 111403795 uncharacterized protein LOC111403795 isoform X1 K03873 ELOB; elongin-B
E 111380926 transcription elongation factor B polypeptide 3-like K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 111406449 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 111393177 DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3
E 111399384 DNA mismatch repair protein MSH7 isoform X1 K08737 MSH6; DNA mismatch repair protein MSH6
E 111405737 DNA mismatch repair protein MSH6 isoform X1 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 111409543 DNA mismatch repair protein MLH1 K08734 MLH1; DNA mismatch repair protein MLH1
E 111375961 DNA mismatch repair protein PMS1-like K10858 PMS2; DNA mismatch repair protein PMS2
E 111375987 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 111401240 DNA mismatch repair protein MLH3 isoform X1 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 111366829 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 111399690 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
E 111368878 uncharacterized protein LOC111368878 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
E 111384517 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 111387325 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 111372408 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 111368686 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 111375424 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 111404055 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 111391308 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E 111398545 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 111371985 replication factor C subunit 2-like K10755 RFC2_4; replication factor C subunit 2/4
E 111380526 uncharacterized protein LOC111380526 K10756 RFC3_5; replication factor C subunit 3/5
E 111378156 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
E 111366800 uncharacterized protein LOC111366800 K10756 RFC3_5; replication factor C subunit 3/5
E 111410414 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
E 111385590 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 111389793 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 111407771 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 111383639 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 111393858 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 111401401 exonuclease 1 isoform X1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 111372733 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 111393964 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 111386701 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 111389493 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 111404069 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 111409695 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA1-core complex
E 111405785 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 111396953 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 111369754 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 111386948 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 111385260 uncharacterized protein LOC111385260 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 111391142 uncharacterized protein LOC111391142 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 111397383 BRISC and BRCA1-A complex member 2 K12173 BRE; BRCA1-A complex subunit BRE
E 111405506 lys-63-specific deubiquitinase BRCC36-like K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
E 111376968 lys-63-specific deubiquitinase BRCC36-like K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 111394487 Fanconi anemia group J protein homolog isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 111410501 DNA topoisomerase 2-binding protein 1 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 111411747 BRCT domain-containing protein At4g02110-like K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 111404523 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 111404069 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 111409695 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA complex
E 111406546 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 111373917 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 111373917 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 111371357 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 111382898 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 111399723 DNA repair protein RAD51 homolog 4 K10871 RAD51L3; RAD51-like protein 3
E 111383790 DNA repair protein XRCC2 homolog isoform X1 K10879 XRCC2; DNA-repair protein XRCC2
E 111390912 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
E 111402198 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 111381883 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 111378726 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 111410606 protein CHROMATIN REMODELING 25 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 111405477 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 111380000 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 111410081 protein CHROMATIN REMODELING 35-like isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 111411307 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 111410537 protein CHROMATIN REMODELING 35-like isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 111410307 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 111410308 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 111380744 mediator of RNA polymerase II transcription subunit 34-like K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 111408073 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 111383456 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 111401852 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 111383456 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 111409519 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 111396646 LOW QUALITY PROTEIN: DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 111366958 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E 111387325 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 111372408 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 111368686 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 111375424 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 111404055 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 111374200 serine/threonine-protein phosphatase PP-X isozyme 2 isoform X1 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 111376488 serine/threonine-protein phosphatase PP-X isozyme 2-like K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 111374029 serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X1 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 111396590 serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 111388272 serine/threonine-protein phosphatase 4 regulatory subunit 3-like K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 111383378 serine/threonine-protein phosphatase 4 regulatory subunit 3-like K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 111390753 uncharacterized protein LOC111390753 isoform X1 K19022 AP5B1; AP-5 complex subunit beta-1
E 111366048 AP-5 complex subunit mu K19023 AP5M1; AP-5 complex subunit mu-1
E 111379116 AP-5 complex subunit zeta-1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 111410478 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 111406763 structural maintenance of chromosomes protein 6A-like K22804 SMC6; structural maintenance of chromosomes protein 6
E 111371384 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 111402540 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 111380212 non-structural maintenance of chromosomes element 4 homolog A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 111390759 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 111384279 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 111373010 crossover junction endonuclease EME1B isoform X1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 111408891 protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 111372652 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 111393206 structure-specific endonuclease subunit SLX1 homolog K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 111410473 structure-specific endonuclease subunit SLX1 homolog K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 111391547 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 111391567 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 111390398 uncharacterized protein LOC111390398 K19026 SPG11; spatacsin
E 111392469 uncharacterized protein LOC111392469 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 111367216 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 111409738 protein MRG1-like isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 111400845 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 111408690 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 111373351 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 111373353 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 111373354 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 111409270 ATPase family AAA domain-containing protein FIGL1 isoform X1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 111411980 zinc finger SWIM domain-containing protein 7-like K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 111411978 zinc finger SWIM domain-containing protein 7-like K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 111396657 Werner Syndrome-like exonuclease isoform X1 K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 111410124 uncharacterized protein LOC111410124 isoform X1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 111412282 DNA-dependent metalloprotease WSS1-like K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 111395642 single-stranded DNA-binding protein WHY1, chloroplastic-like K26559 WHY1; single-stranded DNA-binding protein WHY1
E 111402003 single-stranded DNA-binding protein WHY2, mitochondrial-like K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 111376576 ATP-dependent DNA helicase 2 subunit KU70 isoform X1 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 111402256 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 111404069 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
D DNA Ligase 4 complex
E 111378531 DNA ligase 4 isoform X1 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 111367474 DNA repair protein XRCC4-like K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 111403350 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 111392531 LOW QUALITY PROTEIN: transcription factor bHLH140-like K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 111392550 transcription factor bHLH140-like K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 111395975 uncharacterized protein LOC111395975 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 111405633 uncharacterized protein LOC111405633 isoform X1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 111367275 E3 ubiquitin-protein ligase FANCL isoform X1 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 111379080 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 111367483 uncharacterized protein LOC111367483 K11511 APITD1; centromere protein S
E 111381960 protein MHF1 homolog K11511 APITD1; centromere protein S
E 111381612 uncharacterized protein LOC111381612 isoform X1 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 111383456 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 111409519 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 111396646 LOW QUALITY PROTEIN: DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 111366958 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
D FANCD2-I complex
E 111383828 Fanconi anemia group D2 protein isoform X1 K10891 FANCD2; fanconi anemia group D2 protein
E 111393384 Fanconi anemia group I protein homolog isoform X1 K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 111406546 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 111394487 Fanconi anemia group J protein homolog isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 111393509 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 111373917 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 111382898 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 111374502 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 111410347 WD repeat-containing protein 48-like isoform X1 K15361 WDR48; WD repeat-containing protein 48
E 111373455 WD repeat-containing protein 48-like isoform X1 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 111373669 phytochrome-associated serine/threonine-protein phosphatase 3-like K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 111401751 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 111367035 phytochrome-associated serine/threonine-protein phosphatase-like K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 111412341 serine/threonine-protein phosphatase 6 regulatory subunit 3-like K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 111370111 telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
E 111371619 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 111389493 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 111401859 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 111410653 DNA polymerase kappa isoform X1 K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 111411987 DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 111411635 DNA polymerase zeta catalytic subunit isoform X1 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 111400873 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 111409217 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 111367961 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 111388372 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 111397094 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 111374249 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 111371315 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 111412008 DNA repair protein RAD5A isoform X1 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 111374001 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 111375649 ubiquitin-conjugating enzyme E2 variant 1C K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 111366279 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 111369494 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 111374606 ubiquitin-conjugating enzyme E2 variant 1A-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 111403984 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 111385876 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 111391581 ubiquitin-conjugating enzyme E2 36-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 111382985 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 111395573 ubiquitin-conjugating enzyme E2 35-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 111370828 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 111407771 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 111383639 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 111393858 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 111389567 cell cycle checkpoint control protein RAD9A isoform X1 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 111405205 uncharacterized protein LOC111405205 K10903 HUS1; HUS1 checkpoint protein
D 111393914 uncharacterized protein LOC111393914 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 111401979 cell cycle checkpoint protein RAD17 K06662 HRAD17; cell cycle checkpoint protein
D 111398545 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 111371985 replication factor C subunit 2-like K10755 RFC2_4; replication factor C subunit 2/4
D 111380526 uncharacterized protein LOC111380526 K10756 RFC3_5; replication factor C subunit 3/5
D 111378156 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
D 111366800 uncharacterized protein LOC111366800 K10756 RFC3_5; replication factor C subunit 3/5
D 111410414 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D 111385590 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 111389793 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 111393914 uncharacterized protein LOC111393914 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 111402965 protein timeless homolog K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
C Triple T complex
D 111374502 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 111395857 uncharacterized protein LOC111395857 isoform X1 K20403 TTI1; TELO2-interacting protein 1
D 111405987 uncharacterized protein At2g39910 isoform X1 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 111385173 uncharacterized protein LOC111385173 K23390 BAG6; large proline-rich protein BAG6
D 111371445 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 111394196 LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 111368111 serine/threonine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 111368157 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 111409478 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 111408852 14-3-3 protein 7 K06630 YWHAE; 14-3-3 protein epsilon
D 111366771 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 111378237 14-3-3 protein 9 K06630 YWHAE; 14-3-3 protein epsilon
D 111376287 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 111390502 14-3-3 protein 1 K06630 YWHAE; 14-3-3 protein epsilon
D 111391676 14-3-3-like protein A isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 111380529 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 111383650 14-3-3 protein 9-like isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 111367509 14-3-3 protein 1-like K06630 YWHAE; 14-3-3 protein epsilon
D 111367546 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 111382810 14-3-3 protein 4-like K06630 YWHAE; 14-3-3 protein epsilon
D 111369558 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 111369565 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 111389870 14-3-3 protein 4-like K06630 YWHAE; 14-3-3 protein epsilon
D 111401395 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 111372712 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 111403576 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 111399527 serine/threonine-protein kinase Nek7-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 111370062 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 111400965 serine/threonine-protein kinase Nek6-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 111377214 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 111405742 serine/threonine-protein kinase Nek2-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 111383074 serine/threonine-protein kinase Nek5-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 111388781 serine/threonine-protein kinase Nek5 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 111411815 serine/threonine-protein kinase Nek2 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 111412316 protein downstream neighbor of Son isoform X1 K22422 DONSON; protein downstream neighbor of Son
D 111403510 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 111383046 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 111400663 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 111376105 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 111410390 protein SDE2 homolog K25059 SDE2; replication stress response regulator SDE2
D 111385980 protein SDE2 homolog K25059 SDE2; replication stress response regulator SDE2
D 111407728 protein DECREASED SIZE EXCLUSION LIMIT 1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 111378024 helicase and polymerase-containing protein TEBICHI-like isoform X1 K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 111383137 helicase and polymerase-containing protein TEBICHI-like isoform X1 K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 111394662 DNA polymerase V-like K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 111384059 DNA polymerase V-like K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 111385043 DNA-directed primase/polymerase protein K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 111382496 uncharacterized protein LOC111382496 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 111397059 5' exonuclease Apollo isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 111393663 exonuclease V, chloroplastic-like K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 111385599 exonuclease V, chloroplastic-like K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 111384747 endonuclease V isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 111370627 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 111396298 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 111370628 endonuclease 4-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 111374089 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 111391630 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 111371680 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 111398169 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 111402188 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 111411314 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 111387796 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 111403272 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 111393888 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 111409623 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 111409624 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 111389051 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 111389052 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 111366817 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 111377259 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 111373014 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 111373950 ribonucleoside-diphosphate reductase small chain-like K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 111409269 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 111369489 ribonucleoside-diphosphate reductase small chain A-like K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 111386562 deoxyribodipyrimidine photo-lyase isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 111406626 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 111394668 putative DNA-3-methyladenine glycosylase YfjP isoform X1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 111401403 putative DNA-3-methyladenine glycosylase YfjP isoform X1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 111380211 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 111393717 adenine DNA glycosylase isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 111369326 uncharacterized protein LOC111369326 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 111393126 uncharacterized protein LOC111393126 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 111398935 uncharacterized protein LOC111398935 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 111391779 uncharacterized protein LOC111391779 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 111374093 uncharacterized protein LOC111374093 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 111374094 uncharacterized protein LOC111374094 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 111381753 uncharacterized protein LOC111381753 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 111405192 uncharacterized protein LOC111405192 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 111396832 uncharacterized protein LOC111396832 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 111391247 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 111368138 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 111374665 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 111365970 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 111403957 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 111403957 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 111409417 uncharacterized protein LOC111409417 K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 111368558 uncharacterized protein LOC111368558 isoform X1 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 111381259 single-stranded DNA-binding protein, mitochondrial isoform X1 K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 111403841 DNA repair protein recA homolog 3, mitochondrial-like K03553 recA; recombination protein RecA
E 111377858 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
E 111373504 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 111403841 DNA repair protein recA homolog 3, mitochondrial-like K03553 recA; recombination protein RecA
E 111377858 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
E 111373504 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 111396335 ATP-dependent DNA helicase homolog RECG, chloroplastic K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 111384143 DNA gyrase subunit A, chloroplastic/mitochondrial K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 111407815 DNA gyrase subunit B, chloroplastic/mitochondrial-like K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 111379993 uncharacterized protein LOC111379993 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 111393723 uncharacterized protein LOC111393723 isoform X1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 111403841 DNA repair protein recA homolog 3, mitochondrial-like K03553 recA; recombination protein RecA
D 111377858 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
D 111373504 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D 111381259 single-stranded DNA-binding protein, mitochondrial isoform X1 K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 111387796 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 111403272 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 111393888 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 111409623 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 111409624 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 111389051 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 111389052 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024