+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Osmia lignaria (orchard mason bee)
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 117600545 rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D 117609572 nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 117604953 nucleolar protein 58 K14565 NOP58; nucleolar protein 58
D 117611152 NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
C Box H/ACA snoRNPs
D 117605243 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 117609145 H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D 117603686 H/ACA ribonucleoprotein complex subunit 2-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
D 117600598 H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D 117608458 H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1
D 117611708 protein SHQ1 homolog isoform X1 K14764 SHQ1; protein SHQ1
B 90S particles
C U3 small nucleolar RNA-associated proteins
D 117610471 U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D 117606490 U3 small nucleolar ribonucleoprotein protein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D 117604714 U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10
D 117602422 neuroguidin isoform X1 K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5
D 117604573 ribosomal RNA-processing protein 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7
D 117611591 periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2
D 117607899 nucleolar protein 14 homolog K14766 NOP14; nucleolar protein 14
D 117607301 something about silencing protein 10-like K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D 117607303 something about silencing protein 10-like isoform X1 K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D 117607110 U3 small nucleolar RNA-associated protein 4 homolog K14548 UTP4; U3 small nucleolar RNA-associated protein 4
D 117606749 WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5
D 117608946 U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6
D 117610705 WD repeat-containing protein 46 isoform X1 K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D 117602097 HEAT repeat-containing protein 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10
D 117600464 probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11
D 117607457 WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12
D 117601297 transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13
D 117608638 U3 small nucleolar RNA-associated protein 14 homolog A K14567 UTP14; U3 small nucleolar RNA-associated protein 14
D 117602547 U3 small nucleolar RNA-associated protein 15 homolog K14549 UTP15; U3 small nucleolar RNA-associated protein 15
D 117605146 WD repeat-containing protein 75 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
D 117604266 U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D 117610706 nucleolar complex protein 4 homolog isoform X1 K14771 NOC4; U3 small nucleolar RNA-associated protein 19
D 117600841 small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20
D 117601615 WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21
D 117600263 nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22
D 117600751 rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23
D 117600888 rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D 117610061 digestive organ expansion factor homolog K14774 UTP25; U3 small nucleolar RNA-associated protein 25
D 117610297 ribosomal L1 domain-containing protein 1-like K14775 UTP30; ribosome biogenesis protein UTP30
C Helicases
D 117605717 probable ATP-dependent RNA helicase DDX10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
D 117601640 probable ATP-dependent RNA helicase pitchoune isoform X1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 117608295 probable ATP-dependent RNA helicase DDX47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D 117600268 probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
D 117601857 probable ATP-dependent RNA helicase DDX52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
D 117603904 putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 117606577 probable ATP-dependent RNA helicase kurz isoform X1 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
D 117609952 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
C GTPase
D 117608468 ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1
C RNase
D 117605285 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D 117600807 RNA exonuclease 4 isoform X1 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D 117607005 lariat debranching enzyme-like isoform X1 K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
C Kinase
D 117602089 casein kinase II subunit alpha isoform X1 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 117610711 casein kinase II subunit beta isoform X1 K03115 CSNK2B; casein kinase II subunit beta
C Other 90S particles
D 117611729 protein AATF K14782 AATF; protein AATF/BFR2
D 117605234 ribosomal RNA small subunit methyltransferase NEP1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D 117608503 activator of basal transcription 1-like K14785 ESF2; ESF2/ABP1 family protein
D 117600204 protein KRI1 homolog K14786 KRI1; protein KRI1
D 117601502 KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein
D 117602015 probable RNA-binding protein 19 K14787 MRD1; multiple RNA-binding domain-containing protein 1
D 117611130 RNA cytidine acetyltransferase K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-]
D 117606469 nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2
D 117607746 nucleolar protein 9 K14790 NOP9; nucleolar protein 9
D 117603282 transcriptional regulator ATRX-like K11135 PINX1; Pin2-interacting protein X1
D 117601409 RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein
D 117608953 protein RRP5 homolog isoform X1 K14792 RRP5; rRNA biogenesis protein RRP5
D 117600187 U3 small nucleolar RNA-interacting protein 2 isoform X1 K14793 RRP9; ribosomal RNA-processing protein 9
D 117603932 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12
D 117602746 ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36
D 117601656 DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13
B Pre-40S particles
C Kinases
D 117607136 serine/threonine-protein kinase RIO1 isoform X1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D 117609684 serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C Export and cytoplasmic maturation factors
D 117604526 probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
D 117610800 probable 18S rRNA (guanine-N(7))-methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309]
D 117608375 rRNA N6-adenosine-methyltransferase METTL5-like K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5
D 117607464 bystin K14797 ENP1; essential nuclear protein 1
D 117607642 protein LTV1 homolog isoform X1 K14798 LTV1; protein LTV1
D 117606924 RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1
D 117608617 RNA-binding protein pno1 K11884 PNO1; RNA-binding protein PNO1
D 117602400 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 117600713 adenylate kinase isoenzyme 6 isoform X1 K18532 AK6; adenylate kinase [EC:2.7.4.3]
D 117608801 pre-rRNA-processing protein TSR1 homolog isoform X1 K14799 TSR1; pre-rRNA-processing protein TSR1
D 117600642 uncharacterized protein LOC117600642 K14800 TSR2; pre-rRNA-processing protein TSR2
D 117606264 ribosome biogenesis protein TSR3 homolog K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D 117605861 programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4
D 117601466 programmed cell death protein 2-like K14801 TSR4; pre-rRNA-processing protein TSR4
D 117603565 active regulator of SIRT1-like K26536 RPS19BP1; active regulator of SIRT1
D 117600937 exportin-1 K14290 XPO1; exportin-1
D 117603426 importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1
D 117610117 transportin-1 isoform X1 K18752 TNPO1; transportin-1
D 117602634 importin-5 K20222 IPO5; importin-5
D 117601085 importin-7 isoform X1 K20223 IPO7; importin-7
D 117608413 importin-9 isoform X1 K20224 IPO9; importin-9
C Other pre-40S particles
D 117600395 probable phospholipid-transporting ATPase IA isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D 117610113 eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J
D 117611901 probable protein phosphatase 2C T23F11.1 isoform X1 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16]
D 117605191 ATP-binding cassette sub-family E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
B Pre-60S particles
C Helicases
D 117607918 DEAD-box ATP-dependent RNA helicase 20-like isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 117602524 ATP-dependent RNA helicase p62-like isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 117604337 ATP-dependent RNA helicase dbp2-like isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 117604445 ATP-dependent RNA helicase dbp2 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 117601640 probable ATP-dependent RNA helicase pitchoune isoform X1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 117605066 ATP-dependent RNA helicase DDX24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
D 117604888 probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D 117605237 probable ATP-dependent RNA helicase DDX31 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D 117600291 ATP-dependent RNA helicase DDX51 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
D 117609122 ATP-dependent RNA helicase DDX54 isoform X1 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
D 117603731 probable ATP-dependent RNA helicase DDX56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
D 117601086 exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C GTPases
D 117609184 guanine nucleotide-binding protein-like 3 homolog K14538 NUG1; nuclear GTP-binding protein
D 117602313 nucleolar GTP-binding protein 2 K14537 NUG2; nuclear GTP-binding protein
D 117608363 nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein
D 117604695 large subunit GTPase 1 homolog K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-]
D 117609599 elongation factor-like GTPase 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-]
C RNases
D 117600801 probable oligoribonuclease isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-]
D 117601133 probable oligoribonuclease isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-]
D 117608317 small RNA degrading nuclease 5 isoform X1 K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 117608326 RNA exonuclease 1 homolog isoform X1 K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 117602572 serine-rich adhesin for platelets-like isoform X1 K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 117608750 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D 117609943 5'-3' exoribonuclease 2 homolog K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D RNase MRP
E 117608697 ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
E 117604990 ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E 117610015 ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
E 117603109 ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
E 117609231 ribonuclease P protein subunit p20 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
E 117605381 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
E 117607999 uncharacterized protein LOC117607999 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
E 117606929 ribonuclease P protein subunit p40-like K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
C Kinases
D 117608350 polynucleotide 5'-hydroxyl-kinase NOL9 isoform X1 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
C Export and cytoplasmic maturation factors
D 117608766 ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2
D 117601063 dnaJ homolog subfamily C member 21 K09506 DNAJA5; DnaJ homolog subfamily A member 5
D 117601154 eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6
D 117608186 heat shock 70 kDa protein cognate 4 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 117602627 heat shock 70 kDa protein cognate 4-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 117603907 heat shock 70 kDa protein cognate 4-like isoform X1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 117606867 mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4
D 117609559 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3
D 117606732 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor
D 117600886 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor
D 117609113 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
D 117600644 NTF2-related export protein K14285 NXT1_2; NTF2-related export protein 1/2
D 117602400 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 117606303 zinc finger protein 622-like K14816 REI1; pre-60S factor REI1
D 117601246 ATPase family protein 2 homolog isoform X1 K14575 AFG2; AAA family ATPase
D 117608730 cyclin-dependent kinase 2-interacting protein-like isoform X1 K26052 CINP; cyclin-dependent kinase 2-interacting protein
D 117600054 uncharacterized protein LOC117600054 K26053 C1ORF109; ribosome biogenesis protein C1orf109
D 117600937 exportin-1 K14290 XPO1; exportin-1
D 117603426 importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1
D 117610117 transportin-1 isoform X1 K18752 TNPO1; transportin-1
D 117602634 importin-5 K20222 IPO5; importin-5
D 117601085 importin-7 isoform X1 K20223 IPO7; importin-7
D 117608413 importin-9 isoform X1 K20224 IPO9; importin-9
D 117610719 dual specificity protein phosphatase MPK-4-like K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
C 5-FMC complex
D 117604582 testis-expressed protein 10 homolog K14827 IPI1; pre-rRNA-processing protein IPI1
D 117605058 WD repeat-containing protein 18 K14829 IPI3; pre-rRNA-processing protein IPI3
D 117609283 uncharacterized protein LOC117609283 K16912 LAS1; ribosomal biogenesis protein LAS1
D 117608581 proline-, glutamic acid- and leucine-rich protein 1-like K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1
C Ribosome quality control proteins
D 117601626 E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
D 117600885 transcription factor 25 K24970 TCF25; transcription factor 25
D 117602979 nuclear export mediator factor NEMF homolog K24971 NEMF; nuclear export mediator factor NEMF
D 117604689 transitional endoplasmic reticulum ATPase TER94 isoform X1 K13525 VCP; transitional endoplasmic reticulum ATPase
D 117604891 nuclear protein localization protein 4 homolog isoform X1 K14015 NPLOC4; nuclear protein localization protein 4
D 117605163 ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1 K14016 UFD1; ubiquitin fusion degradation protein 1
D 117604136 putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29]
D 117609973 ankyrin repeat and zinc finger domain-containing protein 1-like K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1
C Other pre-60S particles
D 117609084 ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1
D 117611788 zinc finger protein 593 homolog K14821 BUD20; bud site selection protein 20
D 117604763 coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1
D 117606704 probable rRNA-processing protein EBP2 homolog K14823 EBP2; rRNA-processing protein EBP2
D 117611723 ribosome biogenesis protein BOP1 homolog K14824 ERB1; ribosome biogenesis protein ERB1
D 117601091 46 kDa FK506-binding nuclear protein-like K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8]
D 117606240 p21-activated protein kinase-interacting protein 1-like K14830 MAK11; protein MAK11
D 117604816 protein MAK16 homolog A K14831 MAK16; protein MAK16
D 117605716 CCAAT/enhancer-binding protein zeta isoform X1 K14832 MAK21; ribosome biogenesis protein MAK21
D 117608842 midasin K14572 MDN1; midasin
D 117606462 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D 117607686 nucleolar complex protein 2 homolog isoform X1 K14833 NOC2; nucleolar complex protein 2
D 117610505 nucleolar complex protein 3 homolog isoform X1 K14834 NOC3; nucleolar complex protein 3
D 117608802 probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310]
D 117611609 RNA-binding protein 28 K14573 NOP4; nucleolar protein 4
D 117609826 probable RNA-binding protein CG14230 K14836 NOP8; nucleolar protein 8
D 117602672 RNA-binding protein 34-like K14837 NOP12; nucleolar protein 12
D 117606567 MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15
D 117606438 ribosome biogenesis protein NOP53 K14840 NOP53; nucleolar protein 53
D 117611812 WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1
D 117604463 ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2
D 117610986 pescadillo homolog K14843 PES1; pescadillo
D 117607506 pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6
D 117608482 ribosomal oxygenase 1 isoform X1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
D 117604241 nuclear valosin-containing protein-like K14571 RIX7; ribosome biogenesis ATPase
D 117600064 probable ribosome production factor 1 K14846 RPF1; ribosome production factor 1
D 117602811 ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2
D 117605412 glutamate-rich WD repeat-containing protein 1 isoform X1 K14848 RRB1; ribosome assembly protein RRB1
D 117608552 ribosomal RNA processing protein 1 homolog isoform X1 K14849 RRP1; ribosomal RNA-processing protein 1
D 117610256 ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287]
D 117603932 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12
D 117601040 nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17
D 117602449 ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis
D 117608370 notchless protein homolog 1 K14855 RSA4; ribosome assembly protein 4
D 117610734 protein SDA1 homolog K14856 SDA1; protein SDA1
D 117601885 pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
D 117607361 protein Peter pan K14859 SSF1_2; ribosome biogenesis protein SSF1/2
D 117601444 translation machinery-associated protein 16 K14860 TMA16; translation machinery-associated protein 16
D 117607201 nucleolar pre-ribosomal-associated protein 1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1
D 117605501 ribosome biogenesis protein WDR12 homolog isoform X1 K14863 WDR12; ribosome biogenesis protein
D 117611228 nuclear fragile X mental retardation-interacting protein 1-like K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1
D 117608299 zinc finger HIT domain-containing protein 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3
B Other ribosome biogenesis factors
C 117600706 protein BCCIP homolog K15262 BCP1; protein BCP1
C 117605302 cell growth-regulating nucleolar protein isoform X1 K15263 LYER; cell growth-regulating nucleolar protein
C 117608040 5-methylcytosine rRNA methyltransferase NSUN4 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
C 117602345 probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1 K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C 117610683 mitochondrial dimethyladenosine transferase 1 K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-]
C 117601474 S-adenosylmethionine sensor upstream of mTORC1 isoform X1 K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286]
C 117609625 rRNA methyltransferase 3, mitochondrial K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-]
C 117603622 rRNA N6-adenosine-methyltransferase ZCCHC4 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-]
C 117607748 probable ATP-dependent RNA helicase DDX28 isoform X1 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7]
C 117601070 ATP-dependent RNA helicase DHX33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6]
C 117601742 bifunctional peptidase and arginyl-hydroxylase JMJD5 isoform X1 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-]
C 117605503 GTPase Era, mitochondrial K03595 era; GTPase
C 117601294 proliferation-associated protein 2G4 K26736 PA2G4; ERBB-3 binding protein
C 117604906 mitochondrial GTPase 1 K19828 MTG1; mitochondrial GTPase 1
C 117606251 mitochondrial ribosome-associated GTPase 2 isoform X1 K03979 obgE; GTPase [EC:3.6.5.-]
C 117607310 nitric oxide-associated protein 1 K19832 NOA1; nitric oxide-associated protein 1
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 117609572 nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 117611657 60S ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
C Box H/ACA snoRNPs
D 117605243 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 117600598 H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
B rRNA transcription factors
B rRNA modification factors
C 16S rRNA modification factors
C 23S rRNA modification factors
D 117602450 rRNA methyltransferase 2, mitochondrial K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
B ribosomal protein modification factors
B rRNA processing factors
C 117605285 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
C 117605503 GTPase Era, mitochondrial K03595 era; GTPase
C 117606251 mitochondrial ribosome-associated GTPase 2 isoform X1 K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024