+F Repair protein KO
#
DNA Repair and Recombination Proteins - Oncorhynchus masou masou (cherry salmon)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 135511050 mgmt; (RefSeq) methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D 135514016 alkbh2; (RefSeq) DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 135509625 LOW QUALITY PROTEIN: alpha-ketoglutarate-dependent dioxygenase alkB homolog 3-like K10860 ALKBH3; mRNA N1-methyladenine demethylase [EC:1.14.11.54]
D 135522059 LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3-like K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 135558437 cpdp; (RefSeq) CPD photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 135514015 unga; (RefSeq) uracil DNA glycosylase a isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 135544707 LOW QUALITY PROTEIN: cyclin-O K10861 UDG2; uracil-DNA glycosylase 2 [EC:3.2.2.-]
E 135509616 tdg.1; (RefSeq) thymine DNA glycosylase, tandem duplicate 1 K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E 135509617 G/T mismatch-specific thymine DNA glycosylase-like isoform X1 K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E 135556690 G/T mismatch-specific thymine DNA glycosylase-like K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E 135556691 G/T mismatch-specific thymine DNA glycosylase-like isoform X1 K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E 135555637 mpg; (RefSeq) DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 135541853 smug1; (RefSeq) single-strand-selective monofunctional uracil-DNA glycosylase 1 K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
E 135512563 mutyh; (RefSeq) adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 135504708 methyl-CpG-binding domain protein 4-like K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 135527942 ogg1; (RefSeq) N-glycosylase/DNA lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 135556791 neil1; (RefSeq) endonuclease 8-like 1 isoform X1 K10567 NEIL1; endonuclease VIII-like 1 [EC:3.2.2.- 4.2.99.18]
E 135526494 neil3; (RefSeq) endonuclease 8-like 3 K10569 NEIL3; endonuclease VIII-like 3 [EC:3.2.2.- 4.2.99.18]
E 135537958 endonuclease III-like protein 1 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 135537960 endonuclease III-like protein 1 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 135515650 apex1; (RefSeq) DNA repair nuclease APEX1 K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E 135504231 apex2; (RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 135529930 DNA polymerase delta catalytic subunit-like K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 135513848 pold2; (RefSeq) DNA polymerase delta subunit 2 K02328 POLD2; DNA polymerase delta subunit 2
F 135550369 pold3; (RefSeq) DNA polymerase delta subunit 3 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
F 135507760 pold4; (RefSeq) DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 135514355 pole; (RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 135507435 pole2; (RefSeq) DNA polymerase epsilon subunit 2 K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 135518301 pole3; (RefSeq) DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F 135511707 DNA polymerase epsilon subunit 4-like K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
F 135524584 pole4; (RefSeq) DNA polymerase epsilon subunit 4 K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E 135513946 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 135543163 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 135516663 probable flap endonuclease 1 homolog isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 135522910 flap endonuclease 1 isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 135558095 zgc:110269; (RefSeq) LOW QUALITY PROTEIN: probable flap endonuclease 1 homolog K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 135509681 lig1; (RefSeq) DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 135542974 DNA polymerase beta K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
E 135520141 DNA repair protein XRCC1-like K10803 XRCC1; DNA-repair protein XRCC1
E 135522355 DNA repair protein XRCC1-like K10803 XRCC1; DNA-repair protein XRCC1
E 135550607 xndc1; (RefSeq) DNA repair protein XRCC1 isoform X1 K10803 XRCC1; DNA-repair protein XRCC1
E 135550903 lig3; (RefSeq) DNA ligase 3 isoform X1 K10776 LIG3; DNA ligase 3 [EC:6.5.1.1]
D Other BER factors
E 135507857 tdp1; (RefSeq) tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 135514669 aptx; (RefSeq) aprataxin K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 135539393 aplf; (RefSeq) aprataxin and PNK-like factor isoform X1 K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-]
E 135546225 pnkp; (RefSeq) bifunctional polynucleotide phosphatase/kinase isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 135514622 high mobility group-T protein-like K10802 HMGB1; high mobility group protein B1
E 135544051 high mobility group-T protein isoform X1 K10802 HMGB1; high mobility group protein B1
E 135551077 high mobility group-T protein-like K10802 HMGB1; high mobility group protein B1
E 135552478 high mobility group protein B1-like K10802 HMGB1; high mobility group protein B1
E 135536842 DNA polymerase lambda-like K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 135557706 parp1; (RefSeq) poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 135511654 parp2; (RefSeq) poly [ADP-ribose] polymerase 2 K28005 PARP2; poly [ADP-ribose] polymerase 2 [EC:2.4.2.30]
E 135541895 parp3; (RefSeq) protein mono-ADP-ribosyltransferase PARP3 K10798 PARP3_4; protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
E 135547457 parp4; (RefSeq) protein mono-ADP-ribosyltransferase PARP4 K10798 PARP3_4; protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 135504572 xpc; (RefSeq) DNA repair protein complementing XP-C cells K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 135512698 UV excision repair protein RAD23 homolog B-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 135517592 UV excision repair protein RAD23 homolog B-like K10839 RAD23; UV excision repair protein RAD23
F 135524598 UV excision repair protein RAD23 homolog B-like K10839 RAD23; UV excision repair protein RAD23
F 135548114 UV excision repair protein RAD23 homolog B-like K10839 RAD23; UV excision repair protein RAD23
F 135554255 UV excision repair protein RAD23 homolog A-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 135555511 UV excision repair protein RAD23 homolog A-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 135526466 uncharacterized protein LOC135526466 K10840 CETN2; centrin-2
F 135526705 uncharacterized protein LOC135526705 isoform X1 K10840 CETN2; centrin-2
F 135545153 cetn2; (RefSeq) uncharacterized protein cetn2 K10840 CETN2; centrin-2
F 135545948 uncharacterized protein LOC135545948 K10840 CETN2; centrin-2
E Cul4-DDB2 complex
F 135527084 RING-box protein 1-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 135554200 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 135555565 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 135526533 cullin-4B-like isoform X1 K10609 CUL4; cullin 4
F 135531207 cullin-4A-like isoform X1 K10609 CUL4; cullin 4
F 135537925 cullin-4A-like isoform X1 K10609 CUL4; cullin 4
F 135546000 cullin-4B-like K10609 CUL4; cullin 4
F 135505870 LOW QUALITY PROTEIN: DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
F 135546551 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
F 135556760 ddb2; (RefSeq) DNA damage-binding protein 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 135510686 DNA-directed RNA polymerase II subunit RPB1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 135516389 DNA-directed RNA polymerase II subunit RPB1-like K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 135526434 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 135545918 polr2b; (RefSeq) DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 135524492 polr2c; (RefSeq) DNA-directed RNA polymerase II subunit RPB3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 135552823 DNA-directed RNA polymerase II subunit RPB4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 135511044 DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 135524566 polr2eb; (RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 135554228 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 135555546 DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 135526781 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 135545456 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 135524794 polr2h; (RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 135546532 polr2i; (RefSeq) DNA-directed RNA polymerase II subunit RPB9 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 135550380 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 135557976 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 135548671 polr2j; (RefSeq) DNA-directed RNA polymerase II subunit RPB11-a K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 135549013 DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 135551672 DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 135527084 RING-box protein 1-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 135554200 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 135555565 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 135526533 cullin-4B-like isoform X1 K10609 CUL4; cullin 4
F 135531207 cullin-4A-like isoform X1 K10609 CUL4; cullin 4
F 135537925 cullin-4A-like isoform X1 K10609 CUL4; cullin 4
F 135546000 cullin-4B-like K10609 CUL4; cullin 4
F 135505870 LOW QUALITY PROTEIN: DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
F 135546551 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
F 135513860 ercc8; (RefSeq) DNA excision repair protein ERCC-8 isoform X1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 135510794 ercc6; (RefSeq) DNA excision repair protein ERCC-6 K10841 ERCC6; DNA excision repair protein ERCC-6
F 135545659 uvssa; (RefSeq) LOW QUALITY PROTEIN: UV-stimulated scaffold protein A K23720 UVSSA; UV-stimulated scaffold protein A
F 135535884 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 135554267 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 135555497 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 135542908 general transcription and DNA repair factor IIH helicase subunit XPB-like K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 135543107 general transcription and DNA repair factor IIH helicase subunit XPB-like K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 135543112 general transcription and DNA repair factor IIH helicase subunit XPB isoform X1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 135552740 ercc2; (RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 135532203 general transcription factor IIH subunit 1-like K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 135513746 gtf2h2; (RefSeq) general transcription factor IIH subunit 2 isoform X1 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 135541847 gtf2h3; (RefSeq) general transcription factor IIH subunit 3 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 135549520 gtf2h4; (RefSeq) general transcription factor IIH subunit 4 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 135557729 gtf2h5; (RefSeq) general transcription factor IIH subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 135542605 cdk7; (RefSeq) cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 135539017 ccnh; (RefSeq) cyclin-H K06634 CCNH; cyclin H
E 135525806 mnat1; (RefSeq) CDK-activating kinase assembly factor MAT1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 135546466 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 135552943 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 135520070 replication protein A 32 kDa subunit-like K10739 RFA2; replication factor A2
E 135522424 replication protein A 32 kDa subunit-like K10739 RFA2; replication factor A2
E 135553296 replication protein A 32 kDa subunit-like K10739 RFA2; replication factor A2
E 135552024 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Other NER factors
E 135506830 DNA repair protein complementing XP-A cells homolog K10847 XPA; DNA-repair protein complementing XP-A cells
E 135507606 DNA repair protein complementing XP-A cells homolog K10847 XPA; DNA-repair protein complementing XP-A cells
E 135547704 DNA excision repair protein ERCC-1-like K10849 ERCC1; DNA excision repair protein ERCC-1
E 135547773 DNA excision repair protein ERCC-1-like K10849 ERCC1; DNA excision repair protein ERCC-1
E 135523688 ercc4; (RefSeq) DNA repair endonuclease XPF K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 135530412 DNA excision repair protein ERCC-5-like K10846 ERCC5; DNA excision repair protein ERCC-5
E 135537414 LOW QUALITY PROTEIN: DNA excision repair protein ERCC-5-like K10846 ERCC5; DNA excision repair protein ERCC-5
E 135509681 lig1; (RefSeq) DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 135505089 MMS19 nucleotide excision repair protein homolog isoform X1 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 135523877 MMS19 nucleotide excision repair protein homolog isoform X1 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 135514042 coiled-coil domain-containing protein 117-like K27967 CCDC117; coiled-coil domain-containing protein 117
E 135542130 coiled-coil domain-containing protein 117-like K27967 CCDC117; coiled-coil domain-containing protein 117
E 135514151 probable cytosolic iron-sulfur protein assembly protein ciao1-A isoform X1 K24730 CIAO1; cytosolic iron-sulfur protein assembly protein CIAO1
E 135540995 probable cytosolic iron-sulfur protein assembly protein ciao1-B isoform X1 K24730 CIAO1; cytosolic iron-sulfur protein assembly protein CIAO1
E 135504438 cytosolic iron-sulfur assembly component 2B-like K26403 CIAO2; cytosolic iron-sulfur assembly component 2
E 135509651 ciao2a; (RefSeq) cytosolic iron-sulfur assembly component 2A K26403 CIAO2; cytosolic iron-sulfur assembly component 2
E 135547825 cytosolic iron-sulfur assembly component 2B-like K26403 CIAO2; cytosolic iron-sulfur assembly component 2
E 135509911 cullin-3-like K03869 CUL3; cullin 3
E 135546040 cullin-3-like K03869 CUL3; cullin 3
E 135552509 cullin-3 K03869 CUL3; cullin 3
E 135559040 cullin-3-like K03869 CUL3; cullin 3
E 135546356 cullin-5-like K10612 CUL5; cullin 5
E 135550864 cullin-5-like isoform X1 K10612 CUL5; cullin 5
E 135552827 cullin-5 K10612 CUL5; cullin 5
E 135522962 elongin-C K03872 ELOC; elongin-C
E 135539297 elongin-C K03872 ELOC; elongin-C
E 135504760 elongin-B-like K03873 ELOB; elongin-B
E 135554436 elongin-B K03873 ELOB; elongin-B
E 135524900 eloal; (RefSeq) elongin A, like K15076 ELOA; elongin-A
E 135550035 elongin-A-like isoform X1 K15076 ELOA; elongin-A
E 135552293 LOW QUALITY PROTEIN: elongin-A-like K15076 ELOA; elongin-A
E 135528708 ubiquitin-associated protein 2-like isoform X1 K26545 UBAP2; ubiquitin-associated protein 2
E 135539651 ubap2a; (RefSeq) LOW QUALITY PROTEIN: ubiquitin-associated protein 2a K26545 UBAP2; ubiquitin-associated protein 2
E 135541483 ubiquitin-associated protein 2-like isoform X1 K26545 UBAP2; ubiquitin-associated protein 2
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 135523823 msh2; (RefSeq) DNA mismatch repair protein Msh2 K08735 MSH2; DNA mismatch repair protein MSH2
E 135545727 msh3; (RefSeq) DNA mismatch repair protein Msh3 isoform X1 K08736 MSH3; DNA mismatch repair protein MSH3
E 135523506 msh6; (RefSeq) DNA mismatch repair protein Msh6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 135547127 pms1; (RefSeq) PMS1 protein homolog 1 K10864 PMS1; DNA mismatch repair protein PMS1
E 135510817 mlh1; (RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh1 K08734 MLH1; DNA mismatch repair protein MLH1
E 135523643 pms2; (RefSeq) mismatch repair endonuclease PMS2 K10858 PMS2; DNA mismatch repair protein PMS2
E 135525869 mlh3; (RefSeq) DNA mismatch repair protein Mlh3 isoform X1 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 135529930 DNA polymerase delta catalytic subunit-like K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 135513848 pold2; (RefSeq) DNA polymerase delta subunit 2 K02328 POLD2; DNA polymerase delta subunit 2
E 135550369 pold3; (RefSeq) DNA polymerase delta subunit 3 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
E 135507760 pold4; (RefSeq) DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 135546466 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 135552943 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 135520070 replication protein A 32 kDa subunit-like K10739 RFA2; replication factor A2
E 135522424 replication protein A 32 kDa subunit-like K10739 RFA2; replication factor A2
E 135553296 replication protein A 32 kDa subunit-like K10739 RFA2; replication factor A2
E 135552024 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 135533090 replication factor C subunit 1-like K10754 RFC1; replication factor C subunit 1
E 135533508 replication factor C subunit 1-like K10754 RFC1; replication factor C subunit 1
E 135512915 replication factor C subunit 4-like K10755 RFC2_4; replication factor C subunit 2/4
E 135550794 rfc2; (RefSeq) replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 135556394 replication factor C subunit 4-like isoform X1 K10755 RFC2_4; replication factor C subunit 2/4
E 135513791 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
E 135533685 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 135513946 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 135543163 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 135510973 exo1; (RefSeq) LOW QUALITY PROTEIN: exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 135514622 high mobility group-T protein-like K10802 HMGB1; high mobility group protein B1
E 135544051 high mobility group-T protein isoform X1 K10802 HMGB1; high mobility group protein B1
E 135551077 high mobility group-T protein-like K10802 HMGB1; high mobility group protein B1
E 135552478 high mobility group protein B1-like K10802 HMGB1; high mobility group protein B1
E 135509681 lig1; (RefSeq) DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 135551517 WD repeat-containing protein 76-like isoform X1 K24755 WDR76; WD repeat-containing protein 76
E 135556801 WD repeat-containing protein 76-like K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 135553161 mre11a; (RefSeq) double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 135548797 rad50; (RefSeq) DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 135520756 nibrin-like K10867 NBN; nibrin
E 135521746 nibrin-like K10867 NBN; nibrin
D BRCA1-core complex
E 135504841 breast cancer type 1 susceptibility protein homolog isoform X1 K10605 BRCA1; breast cancer type 1 susceptibility protein [EC:2.3.2.27]
E 135547570 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 135504841 breast cancer type 1 susceptibility protein homolog isoform X1 K10605 BRCA1; breast cancer type 1 susceptibility protein [EC:2.3.2.27]
E 135548286 BRCA1-A complex subunit Abraxas 1 K20774 FAM175A; BRCA1-A complex subunit Abraxas
E 135548640 uimc1; (RefSeq) BRCA1-A complex subunit RAP80 isoform X1 K20775 UIMC1; BRCA1-A complex subunit RAP80
E 135550732 BRCA1-A complex subunit RAP80-like isoform X1 K20775 UIMC1; BRCA1-A complex subunit RAP80
E 135513233 babam1; (RefSeq) BRISC and BRCA1-A complex member 1 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 135526139 babam2; (RefSeq) BRISC and BRCA1-A complex member 2 K12173 BRE; BRCA1-A complex subunit BRE
E 135544327 lys-63-specific deubiquitinase BRCC36 isoform X1 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
E 135550438 lys-63-specific deubiquitinase BRCC36-like K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 135504841 breast cancer type 1 susceptibility protein homolog isoform X1 K10605 BRCA1; breast cancer type 1 susceptibility protein [EC:2.3.2.27]
E 135552846 Fanconi anemia group J protein homolog isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 135517428 topbp1; (RefSeq) DNA topoisomerase 2-binding protein 1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 135504841 breast cancer type 1 susceptibility protein homolog isoform X1 K10605 BRCA1; breast cancer type 1 susceptibility protein [EC:2.3.2.27]
E 135517414 rbbp8; (RefSeq) LOW QUALITY PROTEIN: DNA endonuclease RBBP8 K20773 RBBP8; DNA endonuclease RBBP8 [EC:3.1.-.-]
E 135553161 mre11a; (RefSeq) double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 135548797 rad50; (RefSeq) DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 135520756 nibrin-like K10867 NBN; nibrin
E 135521746 nibrin-like K10867 NBN; nibrin
D BRCA complex
E 135504841 breast cancer type 1 susceptibility protein homolog isoform X1 K10605 BRCA1; breast cancer type 1 susceptibility protein [EC:2.3.2.27]
E 135514655 brca2; (RefSeq) breast cancer type 2 susceptibility protein isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 135505900 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
E 135557663 DNA repair protein RAD51 homolog 1 K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 135505900 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
E 135557663 DNA repair protein RAD51 homolog 1 K04482 RAD51; DNA repair protein RAD51
E 135505803 rad51b; (RefSeq) DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 135550750 DNA repair protein RAD51 homolog 3-like isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 135550905 rad51d; (RefSeq) DNA repair protein RAD51 homolog 4 K10871 RAD51L3; RAD51-like protein 3
E 135523207 DNA repair protein XRCC2-like K10879 XRCC2; DNA-repair protein XRCC2
E 135505853 xrcc3; (RefSeq) DNA repair protein XRCC3 isoform X1 K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 135524298 rad52; (RefSeq) DNA repair protein RAD52 homolog K10873 RAD52; DNA repair and recombination protein RAD52
E 135555839 rdm1; (RefSeq) RAD52 motif-containing protein 1 K10874 RDM1; RAD52 motif-containing protein 1
D Rad54 family proteins
E 135513084 rad54l; (RefSeq) DNA repair and recombination protein RAD54-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 135504566 helicase ARIP4-like isoform X1 K10876 RAD54L2; RAD54-like protein 2 [EC:5.6.2.-]
E 135528075 helicase ARIP4-like isoform X1 K10876 RAD54L2; RAD54-like protein 2 [EC:5.6.2.-]
E 135539665 rad54l2; (RefSeq) helicase ARIP4 K10876 RAD54L2; RAD54-like protein 2 [EC:5.6.2.-]
E 135541488 LOW QUALITY PROTEIN: helicase ARIP4-like K10876 RAD54L2; RAD54-like protein 2 [EC:5.6.2.-]
E 135520782 DNA repair and recombination protein RAD54B-like K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
E 135521717 DNA repair and recombination protein RAD54B-like isoform X1 K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E 135514720 ATP-dependent DNA helicase Q1-like K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 135516047 ATP-dependent DNA helicase Q1-like isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 135518348 wrn; (RefSeq) LOW QUALITY PROTEIN: bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 135509332 blm; (RefSeq) recQ-like DNA helicase BLM isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 135551763 ATP-dependent DNA helicase Q4-like isoform X1 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
E 135553806 ATP-dependent DNA helicase Q5-like K10902 RECQL5; ATP-dependent DNA helicase Q5 [EC:5.6.2.4]
E 135554357 ATP-dependent DNA helicase Q5-like isoform X1 K10902 RECQL5; ATP-dependent DNA helicase Q5 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 135509332 blm; (RefSeq) recQ-like DNA helicase BLM isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 135511791 DNA topoisomerase 3-beta-1-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 135511868 LOW QUALITY PROTEIN: DNA topoisomerase 3-beta-1-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 135538756 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 135526857 rmi1; (RefSeq) recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E 135546466 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 135552943 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 135520070 replication protein A 32 kDa subunit-like K10739 RFA2; replication factor A2
E 135522424 replication protein A 32 kDa subunit-like K10739 RFA2; replication factor A2
E 135553296 replication protein A 32 kDa subunit-like K10739 RFA2; replication factor A2
E 135552024 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 135555992 serine/threonine-protein phosphatase 4 catalytic subunit B K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 135556092 serine/threonine-protein phosphatase 4 catalytic subunit B K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 135517313 serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X1 K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1
E 135538931 serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X1 K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1
E 135539547 serine/threonine-protein phosphatase 4 regulatory subunit 1-like K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1
E 135504264 serine/threonine-protein phosphatase 4 regulatory subunit 2-A-like isoform X1 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 135528224 serine/threonine-protein phosphatase 4 regulatory subunit 2-A-like K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 135540231 serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like isoform X1 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 135542166 ppp4r2b; (RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 2-B isoform X1 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 135506186 serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 135511113 serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 135512260 serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 135557374 serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 135505848 ppp4r4; (RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 4 isoform X1 K15426 PPP4R4; serine/threonine-protein phosphatase 4 regulatory subunit 4
D AP-5 complex
E 135540036 ap5b1; (RefSeq) AP-5 complex subunit beta-1 K19022 AP5B1; AP-5 complex subunit beta-1
E 135525845 ap5m1; (RefSeq) AP-5 complex subunit mu-1 K19023 AP5M1; AP-5 complex subunit mu-1
E 135525450 ap5s1; (RefSeq) AP-5 complex subunit sigma-1 K19024 AP5S1; AP-5 complex subunit sigma-1
D SMC5-SMC6 complex
E 135518009 smc5; (RefSeq) structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 135525558 smc6; (RefSeq) structural maintenance of chromosomes protein 6 K22804 SMC6; structural maintenance of chromosomes protein 6
E 135557720 si:dkey-119f1.1; (RefSeq) structural maintenance of chromosomes protein 6-like K22804 SMC6; structural maintenance of chromosomes protein 6
E 135506271 protein LRATD1-like K22805 FAM84A; protein FAM84A
E 135558016 lratd1; (RefSeq) protein LRATD1 isoform X1 K22805 FAM84A; protein FAM84A
E 135554100 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 135555663 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 135519839 E3 SUMO-protein ligase NSE2-like K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 135534071 LOW QUALITY PROTEIN: E3 SUMO-protein ligase NSE2-like K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 135527661 ndnl2; (RefSeq) necdin-like 2 K22823 NSMCE3; non-structural maintenance of chromosomes element 3
E 135505258 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 135535878 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 135514392 slf1; (RefSeq) SMC5-SMC6 complex localization factor protein 1 isoform X1 K26126 SLF1; SMC5-SMC6 complex localization factor protein 1
E 135512166 SMC5-SMC6 complex localization factor protein 2-like K26127 SLF2; SMC5-SMC6 complex localization factor protein 2
E 135523488 SMC5-SMC6 complex localization factor protein 2-like isoform X1 K26127 SLF2; SMC5-SMC6 complex localization factor protein 2
E 135545728 simc1; (RefSeq) SUMO-interacting motif-containing protein 1 K28408 SIMC1; SUMO-interacting motif-containing protein 1
D Other HR factors
E 135512096 eme1; (RefSeq) crossover junction endonuclease EME1 isoform X1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 135525449 exd2; (RefSeq) exonuclease 3'-5' domain-containing protein 2 K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E 135531032 LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing protein 2-like K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E 135510235 mus81; (RefSeq) crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 135549646 26S proteasome complex subunit SEM1-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 135551810 sem1; (RefSeq) 26S proteasome complex subunit SEM1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 135517615 swi5; (RefSeq) DNA repair protein SWI5 homolog isoform X1 K10991 SWI5; DNA repair protein Swi5/Sae3
E 135511037 sfr1; (RefSeq) swi5-dependent recombination DNA repair protein 1 homolog K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
E 135510750 slx1b; (RefSeq) structure-specific endonuclease subunit SLX1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 135535160 slx4; (RefSeq) LOW QUALITY PROTEIN: structure-specific endonuclease subunit SLX4 K10484 BTBD12; structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
E 135557721 flap endonuclease GEN homolog 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 135509649 spg11; (RefSeq) spatacsin isoform X1 K19026 SPG11; spatacsin
E 135526878 zfyve26; (RefSeq) LOW QUALITY PROTEIN: zinc finger FYVE domain-containing protein 26 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 135508664 RAD51-associated protein 1-like K20778 RAD51AP1; RAD51-associated protein 1
E 135514944 RAD51-associated protein 1-like K20778 RAD51AP1; RAD51-associated protein 1
E 135515305 RAD51-associated protein 1-like K20778 RAD51AP1; RAD51-associated protein 1
E 135556041 mortality factor 4-like protein 1 K11339 MORF4L1; mortality factor 4-like protein 1
E 135527864 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 135558284 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 135512460 fignl1; (RefSeq) fidgetin-like protein 1 isoform X1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 135558823 spidr; (RefSeq) DNA repair-scaffolding protein isoform X1 K22806 SPIDR; DNA repair-scaffolding protein
E 135520976 lratd2b; (RefSeq) protein LRATD2 K22810 FAM84B; protein FAM84B
E 135549014 lratd2a; (RefSeq) protein LRATD2a K22810 FAM84B; protein FAM84B
E 135551335 protein LRATD2-like K22810 FAM84B; protein FAM84B
E 135536602 BRCA1-associated ATM activator 1-like isoform X1 K23112 BRAT1; BRCA1-associated ATM activator 1
E 135558304 cfap410; (RefSeq) cilia and flagella associated protein 410 K23456 CFAP410; cilla- and flagella-associated protein
E 135512812 LOW QUALITY PROTEIN: hepatoma-derived growth factor-related protein 2-like K25065 HDGFL2; hepatoma-derived growth factor-related protein 2
E 135556493 hepatoma-derived growth factor-related protein 2-like K25065 HDGFL2; hepatoma-derived growth factor-related protein 2
E 135548599 zswim7; (RefSeq) zinc finger SWIM domain-containing protein 7 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 135554261 uncharacterized protein LOC135554261 K25771 SWSAP1; ATPase SWSAP1
E 135548859 BRCA2-interacting transcriptional repressor EMSY-like isoform X1 K25790 EMSY; BRCA2-interacting transcriptional repressor EMSY
E 135550915 emsy; (RefSeq) BRCA2-interacting transcriptional repressor EMSY isoform X1 K25790 EMSY; BRCA2-interacting transcriptional repressor EMSY
E 135530370 hsf2bp; (RefSeq) heat shock factor 2-binding protein K25791 HSF2BP; heat shock factor 2-binding protein
E 135519990 mms22l; (RefSeq) protein MMS22-like isoform X1 K26125 MMS22L; protein MMS22-like
E 135526072 tonsl; (RefSeq) tonsoku-like protein K09257 NFKBIL2; NF-kappa-B inhibitor-like protein 2
E 135527261 bod1l1; (RefSeq) biorientation of chromosomes in cell division protein 1-like 1 K27262 BOD1L1; biorientation of chromosomes in cell division protein 1-like 1
E 135514960 PCNA-interacting partner-like K27412 PARPBP; PCNA-interacting partner
E 135555300 hrob; (RefSeq) LOW QUALITY PROTEIN: homologous recombination OB-fold protein K27803 HROB; homologous recombination OB-fold protein
E 135508106 mcm8; (RefSeq) LOW QUALITY PROTEIN: DNA helicase MCM8 K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
E 135505998 DNA helicase MCM9-like isoform X1 K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 135512011 X-ray repair cross-complementing protein 5-like K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 135518896 xrcc5; (RefSeq) LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 5 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
E 135522864 prkdc; (RefSeq) LOW QUALITY PROTEIN: DNA-dependent protein kinase catalytic subunit K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
D MRX complex
E 135553161 mre11a; (RefSeq) double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 135548797 rad50; (RefSeq) DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 135542438 lig4; (RefSeq) DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 135544600 xrcc4; (RefSeq) DNA repair protein XRCC4 K10886 XRCC4; DNA-repair protein XRCC4
E 135543180 nhej1; (RefSeq) non-homologous end-joining factor 1 K10980 NHEJ1; non-homologous end-joining factor 1
D X-family DNA polymerases
E 135536842 DNA polymerase lambda-like K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 135518216 polm; (RefSeq) DNA-directed DNA/RNA polymerase mu isoform X1 K03513 POLM; DNA polymerase mu [EC:2.7.7.7]
E 135510868 dntt; (RefSeq) DNA nucleotidylexotransferase K00977 DNTT; DNA nucleotidylexotransferase [EC:2.7.7.31]
E 135511671 DNA nucleotidylexotransferase K00977 DNTT; DNA nucleotidylexotransferase [EC:2.7.7.31]
E 135542974 DNA polymerase beta K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 135514669 aptx; (RefSeq) aprataxin K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 135539393 aplf; (RefSeq) aprataxin and PNK-like factor isoform X1 K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-]
E 135536053 dclre1c; (RefSeq) protein artemis isoform X1 K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
E 135536054 protein artemis-like isoform X1 K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
E 135522186 uncharacterized protein LOC135522186 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 135549471 tdp2b; (RefSeq) tyrosyl-DNA phosphodiesterase 2 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 135517474 smchd1; (RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
E 135512637 PWWP domain-containing DNA repair factor 3A-like isoform X1 K23386 PWWP3; PWWP domain-containing DNA repair factor 3
E 135559005 PWWP domain-containing DNA repair factor 3B-like isoform X1 K23386 PWWP3; PWWP domain-containing DNA repair factor 3
E 135513815 protein PAXX-like K25772 PAXX; protein PAXX
E 135544933 protein PAXX-like isoform X1 K25772 PAXX; protein PAXX
E 135532129 jmjd8; (RefSeq) jmjC domain-containing protein 8 K25792 JMJD8; jumonji domain-containing protein 8
E 135510927 shld2; (RefSeq) shieldin complex subunit 2 isoform X1 K26129 SHLD2; shieldin complex subunit 2
E 135546251 zgc:101664; (RefSeq) shieldin complex subunit 3 K26130 SHLD3; shieldin complex subunit 3
E 135527094 BEN domain-containing protein 4-like K27845 BEND4; BEN domain-containing protein 4
E 135556829 BEN domain-containing protein 4-like K27845 BEND4; BEN domain-containing protein 4
C FA (Fanconi anemia) pathway
D FA core complex
E 135509444 Fanconi anemia group A protein-like isoform X1 K10888 FANCA; fanconi anemia group A protein
E 135547450 fancb; (RefSeq) Fanconi anemia group B protein K10889 FANCB; fanconi anemia group B protein
E 135544328 fancc; (RefSeq) Fanconi anemia group C protein K10890 FANCC; fanconi anemia group C protein
E 135503968 Fanconi anemia group E protein-like isoform X1 K10892 FANCE; fanconi anemia group E protein
E 135538670 LOW QUALITY PROTEIN: Fanconi anemia group E protein-like K10892 FANCE; fanconi anemia group E protein
E 135555169 Fanconi anemia group F protein-like K10893 FANCF; fanconi anemia group F protein
E 135555170 Fanconi anemia group F protein-like K10893 FANCF; fanconi anemia group F protein
E 135542536 fancg; (RefSeq) Fanconi anemia group G protein K10894 FANCG; fanconi anemia group G protein
E 135511006 fancl; (RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 135526097 fancm; (RefSeq) Fanconi anemia group M protein isoform X1 K10896 FANCM; fanconi anemia group M protein
E 135509072 faap24; (RefSeq) Fanconi anemia core complex-associated protein 24 K10898 FAAP24; fanconi anemia-associated protein
E 135523629 faap100; (RefSeq) Fanconi anemia core complex-associated protein 100 K10993 FAAP100; fanconi anemia core complex 100 kDa subunit
D FA core complex binding factors
E 135503676 transcription factor HES-4-B-like K06054 HES1; hairy and enhancer of split 1
E 135508308 transcription factor HES-1-B-like K06054 HES1; hairy and enhancer of split 1
E 135512548 transcription factor HES-1-like K06054 HES1; hairy and enhancer of split 1
E 135524745 transcription factor HES-1-like K06054 HES1; hairy and enhancer of split 1
E 135527380 transcription factor HES-4-B-like K06054 HES1; hairy and enhancer of split 1
E 135558150 transcription factor HES-1-B-like K06054 HES1; hairy and enhancer of split 1
E 135540284 cenps; (RefSeq) centromere protein S K11511 APITD1; centromere protein S
E 135554682 centromere protein X-like K15360 STRA13; centromere protein X
E 135554683 centromere protein X-like K15360 STRA13; centromere protein X
E 135503832 ube2t; (RefSeq) ubiquitin-conjugating enzyme E2 T K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 135509332 blm; (RefSeq) recQ-like DNA helicase BLM isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 135511791 DNA topoisomerase 3-beta-1-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 135511868 LOW QUALITY PROTEIN: DNA topoisomerase 3-beta-1-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 135538756 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 135526857 rmi1; (RefSeq) recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
D FANCD2-I complex
E 135539937 fancd2; (RefSeq) Fanconi anemia group D2 protein K10891 FANCD2; fanconi anemia group D2 protein
E 135509205 fanci; (RefSeq) Fanconi anemia group I protein K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 135504841 breast cancer type 1 susceptibility protein homolog isoform X1 K10605 BRCA1; breast cancer type 1 susceptibility protein [EC:2.3.2.27]
E 135514655 brca2; (RefSeq) breast cancer type 2 susceptibility protein isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 135552846 Fanconi anemia group J protein homolog isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 135556727 fan1; (RefSeq) fanconi-associated nuclease 1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 135505900 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
E 135557663 DNA repair protein RAD51 homolog 1 K04482 RAD51; DNA repair protein RAD51
E 135550750 DNA repair protein RAD51 homolog 3-like isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 135523918 telo2; (RefSeq) telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 135513174 usp1; (RefSeq) ubiquitin carboxyl-terminal hydrolase 1 K11832 USP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
E 135509222 WD repeat-containing protein 48-like isoform X1 K15361 WDR48; WD repeat-containing protein 48
E 135517296 WD repeat-containing protein 48 isoform X1 K15361 WDR48; WD repeat-containing protein 48
E 135522884 WD repeat-containing protein 48-like isoform X1 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 135514242 serine/threonine-protein phosphatase 6 catalytic subunit-like isoform X1 K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 135518286 serine/threonine-protein phosphatase 6 catalytic subunit K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 135539639 serine/threonine-protein phosphatase 6 catalytic subunit-like K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 135544737 serine/threonine-protein phosphatase 6 catalytic subunit K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 135509287 ppp6r2b; (RefSeq) serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1 K15500 PPP6R2; serine/threonine-protein phosphatase 6 regulatory subunit 2
E 135514925 serine/threonine-protein phosphatase 6 regulatory subunit 2-like isoform X1 K15500 PPP6R2; serine/threonine-protein phosphatase 6 regulatory subunit 2
E 135515874 LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 6 regulatory subunit 2-like K15500 PPP6R2; serine/threonine-protein phosphatase 6 regulatory subunit 2
E 135524320 serine/threonine-protein phosphatase 6 regulatory subunit 2-like isoform X1 K15500 PPP6R2; serine/threonine-protein phosphatase 6 regulatory subunit 2
E 135509500 serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 135524535 ppp6r3; (RefSeq) serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 135520916 ankrd28b; (RefSeq) serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A K15502 ANKRD28; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A
E 135551938 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like isoform X1 K15502 ANKRD28; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A
E 135519340 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like isoform X1 K15503 ANKRD44; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B
E 135547611 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like K15503 ANKRD44; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B
E 135504163 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X1 K15504 ANKRD52; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C
E 135528327 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X1 K15504 ANKRD52; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C
E 135539836 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like K15504 ANKRD52; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C
E 135541808 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X1 K15504 ANKRD52; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C
D Ubiquitin ligases
E 135506128 rnf8; (RefSeq) E3 ubiquitin-protein ligase rnf8 isoform X1 K10667 RNF8; E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27]
E 135552492 rnf168; (RefSeq) E3 ubiquitin-protein ligase rnf168 K20779 RNF168; E3 ubiquitin-protein ligase RNF168 [EC:2.3.2.31]
E 135538813 E3 ubiquitin-protein ligase RNF169-like K20805 RNF169; E3 ubiquitin-protein ligase RNF169 [EC:2.3.2.31]
E 135552456 rnf169; (RefSeq) E3 ubiquitin-protein ligase RNF169 K20805 RNF169; E3 ubiquitin-protein ligase RNF169 [EC:2.3.2.31]
E 135513321 herc2; (RefSeq) E3 ubiquitin-protein ligase HERC2 K10595 HERC2; E3 ubiquitin-protein ligase HERC2 [EC:2.3.2.26]
D Others
E 135516253 telomerase Cajal body protein 1-like K23314 WRAP53; telomerase Cajal body protein 1
E 135518001 tprn; (RefSeq) taperin K24164 TPRN; taperin
E 135544491 taperin-like K24164 TPRN; taperin
E 135516530 zinc finger CW-type PWWP domain protein 1-like isoform X1 K24688 ZCWPW1; zinc finger CW-type PWWP domain protein 1
E 135517804 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 135551517 WD repeat-containing protein 76-like isoform X1 K24755 WDR76; WD repeat-containing protein 76
E 135556801 WD repeat-containing protein 76-like K24755 WDR76; WD repeat-containing protein 76
E 135542096 hmces; (RefSeq) abasic site processing protein HMCES K28434 HMCES; abasic site processing protein HMCES
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 135511019 polh; (RefSeq) DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 135534933 poli; (RefSeq) DNA polymerase iota isoform X1 K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
D 135513979 DNA polymerase kappa-like isoform X1 K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 135542709 polk; (RefSeq) DNA polymerase kappa isoform X1 K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 135547346 rev1; (RefSeq) DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 135506046 DNA polymerase zeta catalytic subunit-like K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
D 135557514 rev3l; (RefSeq) DNA polymerase zeta catalytic subunit isoform X1 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
D 135515492 poln; (RefSeq) DNA polymerase nu K16618 POLN; DNA polymerase nu [EC:2.7.7.7]
C Rad6 epistasis group
D 135519082 ubiquitin-conjugating enzyme E2 A-like isoform X1 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 135526547 ubiquitin-conjugating enzyme E2 A isoform X1 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 135545989 ubiquitin-conjugating enzyme E2 A K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 135547399 ubiquitin-conjugating enzyme E2 A-like isoform X1 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 135548836 ubiquitin-conjugating enzyme E2 B isoform X1 K10574 UBE2B; ubiquitin-conjugating enzyme E2 B [EC:2.3.2.23]
D 135550943 ubiquitin-conjugating enzyme E2 B-like isoform X1 K10574 UBE2B; ubiquitin-conjugating enzyme E2 B [EC:2.3.2.23]
D 135539930 E3 ubiquitin-protein ligase RAD18-like isoform X1 K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D 135541893 E3 ubiquitin-protein ligase RAD18-like isoform X1 K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D 135523581 hltf; (RefSeq) helicase-like transcription factor isoform X1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 135504183 ubiquitin-conjugating enzyme E2 variant 1 isoform X1 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 135512634 ubiquitin-conjugating enzyme E2 variant 2 isoform X1 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 135539585 ubiquitin-conjugating enzyme E2 variant 1-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 135541406 ubiquitin-conjugating enzyme E2 variant 1-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 135558827 ube2v2; (RefSeq) ubiquitin-conjugating enzyme E2 variant 2 isoform X1 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 135509193 ubiquitin-conjugating enzyme E2 N K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 135515049 ubiquitin-conjugating enzyme E2 N-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 135515744 ubiquitin-conjugating enzyme E2 N-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 135524238 ubiquitin-conjugating enzyme E2 N-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 135513946 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 135543163 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 135514960 PCNA-interacting partner-like K27412 PARPBP; PCNA-interacting partner
D 135557588 DNA-dependent metalloprotease SPRTN-like K24051 SPRTN; SprT-like domain-contaning protein Spartan
D 135526704 germ cell nuclear acidic protein-like K26957 GCNA; germ cell nuclear acidic protein
D 135545517 gcna; (RefSeq) germ cell nuclear acidic protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D 135526405 rad9a; (RefSeq) cell cycle checkpoint control protein RAD9A isoform X1 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 135514217 rad9b; (RefSeq) cell cycle checkpoint control protein RAD9B K10995 RAD9B; cell cycle checkpoint control protein RAD9B
D 135517266 hus1; (RefSeq) checkpoint protein HUS1 isoform X1 K10903 HUS1; HUS1 checkpoint protein
D 135547902 rad1; (RefSeq) cell cycle checkpoint protein RAD1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 135513749 rad17; (RefSeq) cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 135512915 replication factor C subunit 4-like K10755 RFC2_4; replication factor C subunit 2/4
D 135550794 rfc2; (RefSeq) replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 135556394 replication factor C subunit 4-like isoform X1 K10755 RFC2_4; replication factor C subunit 2/4
D 135513791 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
D 135533685 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 135547902 rad1; (RefSeq) cell cycle checkpoint protein RAD1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 135539874 timeless; (RefSeq) protein timeless homolog K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 135528672 TIMELESS-interacting protein-like K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D 135533387 TIMELESS-interacting protein-like K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D 135555098 tipin; (RefSeq) TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D 135550048 LOW QUALITY PROTEIN: claspin-like K25773 CLSPN; claspin
D 135552307 claspin-like isoform X1 K25773 CLSPN; claspin
C Triple T complex
D 135523918 telo2; (RefSeq) telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 135528194 tti1; (RefSeq) TELO2-interacting protein 1 homolog K20403 TTI1; TELO2-interacting protein 1
D 135546196 tti2; (RefSeq) TELO2-interacting protein 2 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 135520176 large proline-rich protein BAG6-like isoform X1 K23390 BAG6; large proline-rich protein BAG6
D 135522322 LOW QUALITY PROTEIN: large proline-rich protein BAG6-like K23390 BAG6; large proline-rich protein BAG6
D 135549754 LOW QUALITY PROTEIN: large proline-rich protein BAG6-like K23390 BAG6; large proline-rich protein BAG6
D 135552004 large proline-rich protein BAG6-like isoform X1 K23390 BAG6; large proline-rich protein BAG6
D 135514121 ubiquitin-like protein 4A-B K23388 UBL4; ubiquitin-like protein 4
D 135541422 ubiquitin-like protein 4A-A K23388 UBL4; ubiquitin-like protein 4
D 135505093 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
D 135523876 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 135543391 atr; (RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 135541295 atrip; (RefSeq) ATR-interacting protein K10905 ATRIP; ATR interacting protein
D 135546508 atm; (RefSeq) serine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 135510682 cellular tumor antigen p53-like K04451 TP53; tumor protein p53
D 135516385 cellular tumor antigen p53-like isoform X1 K04451 TP53; tumor protein p53
D 135550215 tp53; (RefSeq) cellular tumor antigen p53 isoform X1 K04451 TP53; tumor protein p53
D 135544036 chek1; (RefSeq) serine/threonine-protein kinase Chk1 isoform X1 K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D 135514366 chek2; (RefSeq) serine/threonine-protein kinase Chk2 K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D 135524064 serine/threonine-protein kinase Chk2-like K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D 135507547 M-phase inducer phosphatase 2-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 135526905 cdc25b; (RefSeq) LOW QUALITY PROTEIN: M-phase inducer phosphatase 2 K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 135533374 M-phase inducer phosphatase 1-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 135544169 M-phase inducer phosphatase 1-B-like K05867 CDC25C; M-phase inducer phosphatase 3 [EC:3.1.3.48]
D 135504689 14-3-3 protein beta/alpha-2-like K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 135506111 14-3-3 protein zeta-like K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 135508398 14-3-3 protein zeta-like K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 135521065 14-3-3 protein beta/alpha-A-like K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 135526050 14-3-3 protein beta/alpha-1-like K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 135527924 14-3-3 protein beta/alpha-2 K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 135539522 14-3-3 protein beta/alpha-1-like K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 135542340 14-3-3 protein beta/alpha-1 K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 135557446 ywhaqa; (RefSeq) tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 135517897 ywhah; (RefSeq) 14-3-3 protein eta K16198 YWHAG_H; 14-3-3 protein gamma/eta
D 135529134 14-3-3 protein gamma-1-like K16198 YWHAG_H; 14-3-3 protein gamma/eta
D 135544387 14-3-3 protein eta-like K16198 YWHAG_H; 14-3-3 protein gamma/eta
D 135546436 14-3-3 protein gamma-2-like K16198 YWHAG_H; 14-3-3 protein gamma/eta
D 135548750 ywhag1; (RefSeq) 14-3-3 protein gamma-1 K16198 YWHAG_H; 14-3-3 protein gamma/eta
D 135552912 14-3-3 protein gamma-2 K16198 YWHAG_H; 14-3-3 protein gamma/eta
D 135546184 14-3-3 protein epsilon-like isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 135548886 14-3-3 protein epsilon-like isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 135550867 14-3-3 protein epsilon K06630 YWHAE; 14-3-3 protein epsilon
D 135552671 14-3-3 protein epsilon-like isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 135505909 nav2a; (RefSeq) LOW QUALITY PROTEIN: neuron navigator 2 K19483 NAV2; neuron navigator 2 [EC:5.6.2.4]
D 135509090 LOW QUALITY PROTEIN: neuron navigator 2-like K19483 NAV2; neuron navigator 2 [EC:5.6.2.4]
D 135524152 neuron navigator 2-like isoform X1 K19483 NAV2; neuron navigator 2 [EC:5.6.2.4]
D 135546497 neuron navigator 2-like isoform X1 K19483 NAV2; neuron navigator 2 [EC:5.6.2.4]
D 135509148 wee2; (RefSeq) wee1-like protein kinase 2 K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 135509598 wee1-like protein kinase 1-B isoform X1 K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 135550699 wee1-like protein kinase 1-A isoform X1 K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 135556669 wee1; (RefSeq) wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 135557618 wee1-like protein kinase 1-A K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 135516452 per1b; (RefSeq) period circadian protein homolog 1b isoform X1 K21944 PER1; period circadian protein 1
D 135544337 period circadian protein homolog 1-like isoform X1 K21944 PER1; period circadian protein 1
D 135514993 per2; (RefSeq) period circadian protein homolog 2 isoform X1 K02633 PER2; period circadian protein 2
D 135558622 period circadian protein homolog 2-like K02633 PER2; period circadian protein 2
D 135520370 mediator of DNA damage checkpoint protein 1-like K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 135522116 LOW QUALITY PROTEIN: mediator of DNA damage checkpoint protein 1-like K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 135526817 plastin-3-like K17336 PLS3; plastin-3
D 135547846 plastin-3-like K17336 PLS3; plastin-3
D 135550545 plastin-3 K17336 PLS3; plastin-3
D 135509638 apoptosis-enhancing nuclease-like K18340 AEN; apoptosis-enhancing nuclease [EC:3.1.-.-]
D 135556702 apoptosis-enhancing nuclease-like isoform X1 K18340 AEN; apoptosis-enhancing nuclease [EC:3.1.-.-]
D 135514108 serine/threonine-protein kinase PLK3-like K08862 PLK3; polo-like kinase 3 [EC:2.7.11.21]
D 135558695 serine/threonine-protein kinase PLK3-like K08862 PLK3; polo-like kinase 3 [EC:2.7.11.21]
D 135512993 nek1; (RefSeq) serine/threonine-protein kinase Nek1 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 135540115 serine/threonine-protein kinase Nek4-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 135542063 LOW QUALITY PROTEIN: serine/threonine-protein kinase Nek4-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 135547529 serine/threonine-protein kinase Nek5-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 135521606 serine/threonine-protein kinase Nek10-like K20879 NEK10; serine/threonine-protein kinase Nek10 [EC:2.7.11.1]
D 135519791 nek11; (RefSeq) serine/threonine-protein kinase Nek11 K20880 NEK11; serine/threonine-protein kinase Nek11 [EC:2.7.11.1]
D 135528687 serine/threonine-protein kinase Nek11-like K20880 NEK11; serine/threonine-protein kinase Nek11 [EC:2.7.11.1]
D 135542756 protein downstream neighbor of son homolog K22422 DONSON; protein downstream neighbor of Son
D 135543342 LOW QUALITY PROTEIN: protein downstream neighbor of son homolog K22422 DONSON; protein downstream neighbor of Son
D 135511450 KN motif and ankyrin repeat domain-containing protein 1-like K22808 KANK; KN motif and ankyrin repeat domain-containing protein
D 135513670 kank1a; (RefSeq) LOW QUALITY PROTEIN: KN motif and ankyrin repeat domain-containing protein 1a K22808 KANK; KN motif and ankyrin repeat domain-containing protein
D 135516841 KN motif and ankyrin repeat domain-containing protein 4-like K22808 KANK; KN motif and ankyrin repeat domain-containing protein
D 135518190 KN motif and ankyrin repeat domain-containing protein 1-like K22808 KANK; KN motif and ankyrin repeat domain-containing protein
D 135524625 KN motif and ankyrin repeat domain-containing protein 3-like K22808 KANK; KN motif and ankyrin repeat domain-containing protein
D 135534005 LOW QUALITY PROTEIN: KN motif and ankyrin repeat domain-containing protein 1-like K22808 KANK; KN motif and ankyrin repeat domain-containing protein
D 135554138 KN motif and ankyrin repeat domain-containing protein 2-like isoform X1 K22808 KANK; KN motif and ankyrin repeat domain-containing protein
D 135555614 KN motif and ankyrin repeat domain-containing protein 2-like K22808 KANK; KN motif and ankyrin repeat domain-containing protein
D 135556172 KN motif and ankyrin repeat domain-containing protein 4-like K22808 KANK; KN motif and ankyrin repeat domain-containing protein
D 135558411 KN motif and ankyrin repeat domain-containing protein 2-like K22808 KANK; KN motif and ankyrin repeat domain-containing protein
D 135517491 chmp4c; (RefSeq) charged multivesicular body protein 4c K24782 CHMP4C; charged multivesicular body protein 4C
D 135509451 vacuolar protein sorting-associated protein 4A-like isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 135512862 vacuolar protein sorting-associated protein 4B-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 135513201 vacuolar protein sorting-associated protein 4B isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 135524485 vps4a; (RefSeq) vacuolar protein sorting-associated protein 4A K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 135556444 vacuolar protein sorting-associated protein 4B-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 135558773 vacuolar protein sorting-associated protein 4B-like isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 135508273 zfyve19; (RefSeq) LOW QUALITY PROTEIN: abscission/NoCut checkpoint regulator K24778 ZFYVE19; abscission/NoCut checkpoint regulator
D 135539482 splicing regulator SDE2-like K25059 SDE2; replication stress response regulator SDE2
D 135539484 splicing regulator SDE2-like K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D 135550795 mybbp1a; (RefSeq) myb-binding protein 1A-like protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 135506656 primpol; (RefSeq) DNA-directed primase/polymerase protein isoform X1 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 135523926 dclre1a; (RefSeq) DNA cross-link repair 1A protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D 135503911 dclre1b; (RefSeq) 5' exonuclease Apollo K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 135550745 exonuclease V-like K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 135552866 exonuclease V-like K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 135522861 endonuclease V-like isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 135530773 LOW QUALITY PROTEIN: DNA annealing helicase and endonuclease ZRANB3-like K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 135524786 ankle1; (RefSeq) LOW QUALITY PROTEIN: ankyrin repeat and LEM domain-containing protein 1 K21411 ANKLE1; ankyrin repeat and LEM domain-containing protein 1
C Helicases
D 135517774 helq; (RefSeq) helicase POLQ-like K19178 HELQ; POLQ-like helicase [EC:5.6.2.4]
D 135544261 ercc6l2; (RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 135506823 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 135526298 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 135545797 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 135508105 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 135525767 cell division cycle 5-like protein isoform X1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 135504345 pre-mRNA-splicing factor SPF27-like K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 135528135 pre-mRNA-splicing factor SPF27 K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 135506800 pleiotropic regulator 1-like isoform X1 K12862 PLRG1; pleiotropic regulator 1
D 135507767 pleiotropic regulator 1-like K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 135543263 nudt15; (RefSeq) nucleotide triphosphate diphosphatase NUDT15 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 135554080 LOW QUALITY PROTEIN: oxidized purine nucleoside triphosphate hydrolase-like K17816 NUDT1; 8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase [EC:3.6.1.55 3.6.1.56]
D 135555681 nudt1; (RefSeq) oxidized purine nucleoside triphosphate hydrolase K17816 NUDT1; 8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase [EC:3.6.1.55 3.6.1.56]
D 135546136 nudt18; (RefSeq) 8-oxo-dGDP phosphatase NUDT18 isoform X1 K17817 NUDT18; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D 135537030 deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X1 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 135537032 deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X1 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 135548503 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 135550606 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 135506108 ribonucleoside-diphosphate reductase subunit M2 isoform X1 K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 135549465 rrm2b; (RefSeq) ribonucleoside-diphosphate reductase subunit M2 B K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 135557442 ribonucleoside-diphosphate reductase subunit M2 K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
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AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 135511050 mgmt; (RefSeq) methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D 135558437 cpdp; (RefSeq) CPD photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 135514015 unga; (RefSeq) uracil DNA glycosylase a isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 135541853 smug1; (RefSeq) single-strand-selective monofunctional uracil-DNA glycosylase 1 K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
E 135555637 mpg; (RefSeq) DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 135512563 mutyh; (RefSeq) adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 135537958 endonuclease III-like protein 1 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 135537960 endonuclease III-like protein 1 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 135514797 single-stranded DNA-binding protein, mitochondrial-like K03111 ssb; single-strand DNA-binding protein
E 135515991 single-stranded DNA-binding protein, mitochondrial-like K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 135514797 single-stranded DNA-binding protein, mitochondrial-like K03111 ssb; single-strand DNA-binding protein
D 135515991 single-stranded DNA-binding protein, mitochondrial-like K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 135543263 nudt15; (RefSeq) nucleotide triphosphate diphosphatase NUDT15 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 135537030 deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X1 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 135537032 deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X1 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 29, 2025