+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Ogataea parapolymorpha

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D HPODL_02333 rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D HPODL_04385 Nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D HPODL_01468 Nucleolar protein 58 K14565 NOP58; nucleolar protein 58 D HPODL_02711 ribonucleoprotein-associated protein K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D HPODL_04067 Centromere/microtubule-binding protein CBF5 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D HPODL_01087 Protein component of the H/ACA snoRNP pseudouridylase complex K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D HPODL_02076 hypothetical protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D HPODL_02898 H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 D HPODL_04173 protein SHQ1 K14764 SHQ1; protein SHQ1 B 90S particles C U3 small nucleolar RNA-associated proteins D HPODL_01493 U3 small nucleolar ribonucleoprotein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D HPODL_03316 U3 small nucleolar ribonucleoprotein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D HPODL_02514 U3 small nucleolar RNA-associated protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D HPODL_04268 U3 small nucleolar ribonucleoprotein LCP5 K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D HPODL_05048 putative ribosomal rna-processing protein K14545 RRP7; ribosomal RNA-processing protein 7 D HPODL_04081 Periodic tryptophan protein 2 K14558 PWP2; periodic tryptophan protein 2 D HPODL_03150 Nucleolar protein, forms a complex with Noc4p K14766 NOP14; nucleolar protein 14 D HPODL_02580 Component of the small (ribosomal) subunit (SSU) processosome required for pre-18S rRNa processing K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D HPODL_03566 U3 small nucleolar RNA-associated protein 4 K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D HPODL_02314 hypothetical protein K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D HPODL_03141 hypothetical protein K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D HPODL_02112 hypothetical protein K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D HPODL_05031 U3 small nucleolar RNA-associated protein 7 K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D HPODL_00516 U3 small nucleolar RNA-associated protein 8 K14547 UTP8; U3 small nucleolar RNA-associated protein 8 D HPODL_01402 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D HPODL_01501 U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D HPODL_05006 U3 small nucleolar RNA-associated protein 12 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D HPODL_02182 U3 small nucleolar RNA-associated protein 13 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D HPODL_00945 U3 small nucleolar RNA-associated protein K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D HPODL_03207 U3 small nucleolar RNA-associated protein 15 K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D HPODL_01213 hypothetical protein K14770 BUD21; U3 small nucleolar RNA-associated protein 16 D HPODL_02258 NAN1 U3 snoRNP protein K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D HPODL_02057 U3 snoRNA associated protein K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D HPODL_01532 Nucleolar protein, forms a complex with Nop14p K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D HPODL_00356 U3 small nucleolar RNA-associated protein 20 K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D HPODL_00590 U3 small nucleolar RNA-associated protein 21 K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D HPODL_01125 U3 snoRNP protein involved in maturation of pre-18S rRNA K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D HPODL_02189 rRNA-processing protein UTP23 K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D HPODL_00449 rRNA-processing protein FCF1 K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D HPODL_01321 Protein required for cell viability K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D HPODL_01564 Ribosome biogenesis protein UTP30 K14775 UTP30; ribosome biogenesis protein UTP30 D HPODL_00065 Proteasome-interacting protein CIC1 K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D HPODL_02236 ATP-dependent RNA helicase DBP4 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D HPODL_01445 ATP-dependent RNA helicase HAS1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D HPODL_01043 ATP-dependent rRNA helicase RRP3 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D HPODL_03849 ATP-dependent RNA helicase DBP8 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D HPODL_00644 ATP-dependent RNA helicase ROK1 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D HPODL_01421 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D HPODL_03264 Essential DEAH-box ATP-dependent RNA helicase specific to the U3 snoRNP K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D HPODL_04506 ATP-dependent RNA helicase DHR2 K14781 DHR2; ATP-dependent RNA helicase DHR2 [EC:5.6.2.6] D HPODL_00674 ATP-dependent RNA helicase fal-1 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D HPODL_02701 Ribosome biogenesis protein BMS1 K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D HPODL_03688 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HPODL_02423 lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D HPODL_01572 Casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D HPODL_04421 Casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D HPODL_04318 Casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta D HPODL_02884 Beta regulatory subunit of casein kinase 2, a Ser/Thr protein kinase K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D HPODL_02808 Essential protein possibly involved in secretion K14782 AATF; protein AATF/BFR2 D HPODL_04707 Protein CMS1 K14784 CMS1; protein CMS1 D HPODL_00411 Ribosomal RNA small subunit methyltransferase NEP1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D HPODL_01727 putative pre-rRNA-processing protein K14785 ESF2; ESF2/ABP1 family protein D HPODL_04667 KRRI-Interacting protein 1 K14786 KRI1; protein KRI1 D HPODL_00407 KRR1 small subunit processome component K06961 KRR1; ribosomal RNA assembly protein D HPODL_04332 Multiple RNA-binding domain-containing protein 1 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D HPODL_02897 hypothetical protein K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D HPODL_00258 Nuclear localization sequence-binding protein K11294 NCL; nucleolin D HPODL_02279 Ribosome biogenesis protein ENP2 K14788 NOL10; ribosome biogenesis protein ENP2 D HPODL_02946 hypothetical protein K14789 NOP6; nucleolar protein 6 D HPODL_03705 Nucleolar protein 9 K14790 NOP9; nucleolar protein 9 D HPODL_01680 Protein PXR1 K11135 PINX1; Pin2-interacting protein X1 D HPODL_00612 Periodic tryptophan protein 1 K14791 PWP1; periodic tryptophan protein 1 D HPODL_04134 RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D HPODL_01843 rRNA biogenesis protein RRP5 K14792 RRP5; rRNA biogenesis protein RRP5 D HPODL_00227 Protein involved in pre-rRNA processing K14793 RRP9; ribosomal RNA-processing protein 9 D HPODL_02991 Ribosomal RNA-processing protein 12 K14794 RRP12; ribosomal RNA-processing protein 12 D HPODL_02298 hypothetical protein K14795 RRP36; ribosomal RNA-processing protein 36 D HPODL_03408 hypothetical protein K14796 TMA23; nucleolar protein TMA23 D HPODL_00212 Protein SOF1 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D HPODL_01359 putative casein kinase I K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1] D HPODL_00952 putative ribosomal RNA processing protein (10) K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D HPODL_02201 Serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D HPODL_04989 Dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D HPODL_02961 putative methyltransferase BUD23 K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D HPODL_00322 protein enp1 K14797 ENP1; essential nuclear protein 1 D HPODL_02809 putative low-temperature viability protein K14798 LTV1; protein LTV1 D HPODL_02679 20S-pre-rRNA D-site endonuclease NOB1 K11883 NOB1; RNA-binding protein NOB1 D HPODL_00363 Pre-rRNA-processing protein PNO1 K11884 PNO1; RNA-binding protein PNO1 D HPODL_02779 GTP-binding nuclear protein GSP1/Ran K07936 RAN; GTP-binding nuclear protein Ran D HPODL_04387 nucleotide kinase/nuclear protein involved oxidative stress response K18532 AK6; adenylate kinase [EC:2.7.4.3] D HPODL_01950 Protein required for processing of 20S pre-rRNA in the cytoplasm K14799 TSR1; pre-rRNA-processing protein TSR1 D HPODL_00607 Pre-rRNA-processing protein TSR2 K14800 TSR2; pre-rRNA-processing protein TSR2 D HPODL_04726 Ribosome biogenesis protein TSR3 K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D HPODL_04949 Programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4 D HPODL_04872 Exportin-1 K14290 XPO1; exportin-1 D HPODL_01657 Importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D HPODL_02327 Transportin, cytosolic karyopherin beta 2 K18752 TNPO1; transportin-1 D HPODL_04802 Importin subunit beta-4 K20221 IPO4; importin-4 D HPODL_01679 Importin subunit beta-3 K20222 IPO5; importin-5 D HPODL_00306 putative nonsense-mediated mRNA decay protein (Nmd5) K20223 IPO7; importin-7 D HPODL_02316 hypothetical protein K20223 IPO7; importin-7 D HPODL_00733 Importin subunit beta-5 K20224 IPO9; importin-9 C Other pre-40S particles D HPODL_00791 phospholipid-transporting ATPase DRS2 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D HPODL_02176 Dual function protein K03245 EIF3J; translation initiation factor 3 subunit J D HPODL_00851 type 2c protein phosphatase K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D HPODL_02757 hypothetical protein K14804 SLX9; ribosome biogenesis protein SLX9 D HPODL_00052 Translation initiation factor RLI1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D HPODL_02525 ATP-dependent RNA helicase DBP2 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D HPODL_01445 ATP-dependent RNA helicase HAS1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D HPODL_04687 ATP-dependent RNA helicase MAK5 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D HPODL_02000 ATP-dependent RNA helicase DRS1 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D HPODL_02038 ATP-dependent RNA helicase DBP7 (DEAD-box protein 7) K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D HPODL_02248 ATP-dependent RNA helicase DBP6 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D HPODL_04659 ATP-dependent RNA helicase DBP10 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D HPODL_04008 ATP-dependent rRNA helicase SPB4 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D HPODL_00795 ATP-dependent RNA helicase DBP9 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D HPODL_03747 ATP-dependent RNA helicase DBP3 K14811 DBP3; ATP-dependent RNA helicase DBP3 [EC:5.6.2.7] D HPODL_03649 ATP-dependent RNA helicase DOB1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D HPODL_01486 Nuclear GTP-binding protein NUG1 K14538 NUG1; nuclear GTP-binding protein D HPODL_00767 Nucleolar GTP-binding protein 2 K14537 NUG2; nuclear GTP-binding protein D HPODL_04512 Nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein D HPODL_02708 putative GTPase involved in 60S ribosomal subunit biogenesis K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D HPODL_03519 Ribosome assembly protein 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D HPODL_04313 NGL2 Protein involved in 5.8S rRNA processing K14812 NGL2; RNA exonuclease NGL2 [EC:3.1.-.-] D HPODL_00770 Oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-] D HPODL_00534 hypothetical protein K14570 REX1; RNA exonuclease [EC:3.1.-.-] D HPODL_03219 RNA exonuclease 1 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D HPODL_03406 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D HPODL_04821 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D RNase MRP E HPODL_02233 hypothetical protein K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E HPODL_00348 hypothetical protein K14522 POP3; ribonuclease P/MRP protein subunit POP3 [EC:3.1.26.5] E HPODL_00659 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E HPODL_05368 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E HPODL_03166 Subunit of both RNase MRP and nuclear RNase P K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] E HPODL_02822 hypothetical protein K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] E HPODL_05085 hypothetical protein K14531 SNM1; ribonuclease MRP protein subunit SNM1 C Kinases D HPODL_01359 putative casein kinase I K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1] D HPODL_03414 Protein GRC3 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D HPODL_03450 ABC transporter ATP-binding protein ARB1 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D HPODL_02818 metalloprotease ARX1 K14813 ARX1; metalloprotease ARX1 [EC:3.-.-.-] D HPODL_03356 hypothetical protein K14814 ALB1; ribosome biogenesis protein ALB1 D HPODL_00722 J protein JJJ1 K09506 DNAJA5; DnaJ homolog subfamily A member 5 D HPODL_02028 Eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D HPODL_02193 Heat shock protein 70 2 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D HPODL_02202 Heat shock protein SSB1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D HPODL_02450 Heat shock protein 70 1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D HPODL_02634 mrna turnover protein 4 K14815 MRT4; mRNA turnover protein 4 D HPODL_01598 mRNA transport regulator MTR2 K14543 MTR2; mRNA transport regulator MTR2 D HPODL_03853 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D HPODL_04004 mRNA export factor MEX67 K14284 NXF; nuclear RNA export factor D HPODL_02779 GTP-binding nuclear protein GSP1/Ran K07936 RAN; GTP-binding nuclear protein Ran D HPODL_01951 Zinc finger protein K14816 REI1; pre-60S factor REI1 D HPODL_00685 Pre-60S factor REI1 K14816 REI1; pre-60S factor REI1 D HPODL_00837 60S ribosomal subunit assembly/export protein LOC1 K14817 LOC1; 60S ribosomal subunit assembly/export protein LOC1 D HPODL_01765 Ribosome maturation protein SDO1 K14574 SDO1; ribosome maturation protein SDO1 D HPODL_01946 protein AFG2 K14575 AFG2; AAA family ATPase D HPODL_01801 Ribosome assembly protein SQT1 K14818 SQT1; ribosome assembly protein SQT1 D HPODL_04872 Exportin-1 K14290 XPO1; exportin-1 D HPODL_01657 Importin subunit beta-1 K14293 KPNB1; importin subunit beta-1 D HPODL_02327 Transportin, cytosolic karyopherin beta 2 K18752 TNPO1; transportin-1 D HPODL_04802 Importin subunit beta-4 K20221 IPO4; importin-4 D HPODL_01679 Importin subunit beta-3 K20222 IPO5; importin-5 D HPODL_00306 putative nonsense-mediated mRNA decay protein (Nmd5) K20223 IPO7; importin-7 D HPODL_02316 hypothetical protein K20223 IPO7; importin-7 D HPODL_00733 Importin subunit beta-5 K20224 IPO9; importin-9 D HPODL_01708 Protein phosphatase K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D HPODL_04731 Pre-rRNA-processing protein IPI1-1 K14827 IPI1; pre-rRNA-processing protein IPI1 D HPODL_02944 Pre-rRNA-processing protein IPI3 K14829 IPI3; pre-rRNA-processing protein IPI3 D HPODL_01948 Protein LAS1 K16912 LAS1; ribosomal biogenesis protein LAS1 C Ribosome quality control proteins D HPODL_00032 hypothetical protein K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D HPODL_03367 hypothetical protein K24970 TCF25; transcription factor 25 D HPODL_04087 hypothetical protein K24971 NEMF; nuclear export mediator factor NEMF D HPODL_02504 Cell division control protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase D HPODL_03969 Nuclear protein localization protein 4 K14015 NPLOC4; nuclear protein localization protein 4 D HPODL_01915 Ubiquitin fusion degradation protein 1 K14016 UFD1; ubiquitin fusion degradation protein 1 D HPODL_01004 zinc finger-containing protein K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D HPODL_04017 Ribosome biogenesis protein BRX1 K14820 BRX1; ribosome biogenesis protein BRX1 D HPODL_00276 Protein involved in bud-site selection K14821 BUD20; bud site selection protein 20 D HPODL_05127 hypothetical protein K14822 CGR1; rRNA-processing protein CGR1 D HPODL_04977 Essential protein required for the maturation of 25S rRNA and 60S ribosomal subunit assembly K14823 EBP2; rRNA-processing protein EBP2 D HPODL_05014 Ribosome biogenesis protein ERB1 K14824 ERB1; ribosome biogenesis protein ERB1 D HPODL_05124 hypothetical protein K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D HPODL_00112 Protein MAK11 K14830 MAK11; protein MAK11 D HPODL_01938 Protein MAK16 K14831 MAK16; protein MAK16 D HPODL_00936 Ribosome biogenesis protein MAK21 K14832 MAK21; ribosome biogenesis protein MAK21 D HPODL_04922 Midasin K14572 MDN1; midasin D HPODL_00202 60S ribosome subunit biogenesis protein NIP7 K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D HPODL_04146 Nucleolar complex protein 2 K14833 NOC2; nucleolar complex protein 2 D HPODL_03702 Protein involved in the nuclear export of pre-ribosomes K14834 NOC3; nucleolar complex protein 3 D HPODL_02064 putative ribosomal RNA methyltransferase Nop2 K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D HPODL_01883 NOP4 Nucleolar protein K14573 NOP4; nucleolar protein 4 D HPODL_03712 Nucleolar protein 12 K14837 NOP12; nucleolar protein 12 D HPODL_01961 putative RNA-binding protein K14838 NOP15; nucleolar protein 15 D HPODL_04475 Nucleolar protein 16 K14839 NOP16; nucleolar protein 16 D HPODL_00215 Cellular protein K14840 NOP53; nucleolar protein 53 D HPODL_03928 Ribosome biogenesis protein NSA1 K14841 NSA1; ribosome biogenesis protein NSA1 D HPODL_04269 Ribosome biogenesis protein NSA2 K14842 NSA2; ribosome biogenesis protein NSA2 D HPODL_04330 Nucleolar protein K14843 PES1; pescadillo D HPODL_02422 protein PUF6 K14844 PUF6; pumilio homology domain family member 6 D HPODL_00612 Periodic tryptophan protein 1 K14791 PWP1; periodic tryptophan protein 1 D HPODL_00737 Protein RAI1 K14845 RAI1; RAT1-interacting protein D HPODL_01533 Pre-rRNA-processing protein RIX1 K14828 RIX1; pre-rRNA-processing protein RIX1 D HPODL_03417 Ribosome biogenesis ATPase RIX7 K14571 RIX7; ribosome biogenesis ATPase D HPODL_03620 Ribosome production factor 1 K14846 RPF1; ribosome production factor 1 D HPODL_02601 Ribosome biogenesis protein RPF2 K14847 RPF2; ribosome production factor 2 D HPODL_02849 Ribosome assembly protein RRB1 K14848 RRB1; ribosome assembly protein RRB1 D HPODL_01582 Rrp1p K14849 RRP1; ribosomal RNA-processing protein 1 D HPODL_05315 Ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D HPODL_02991 Ribosomal RNA-processing protein 12 K14794 RRP12; ribosomal RNA-processing protein 12 D HPODL_00456 Component of the pre-60S pre-ribosomal particle K14851 RRP17; ribosomal RNA-processing protein 17 D HPODL_02078 Regulator of ribosome biosynthesis K14852 RRS1; regulator of ribosome biosynthesis D HPODL_02280 hypothetical protein K14853 RSA1; ribosome assembly protein 1 D HPODL_01879 Ribosome assembly protein 3 K14854 RSA3; ribosome assembly protein 3 D HPODL_04433 Ribosome assembly protein 4 K14855 RSA4; ribosome assembly protein 4 D HPODL_03848 Protein SDA1 K14856 SDA1; protein SDA1 D HPODL_03836 AdoMet-dependent rRNA methyltransferase SPB1 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D HPODL_01042 SSF2 high copy suppressor of G beta subunit temperature sensitive mutation K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D HPODL_01906 Translation machinery-associated protein 16 K14860 TMA16; translation machinery-associated protein 16 D HPODL_03338 Nucleolar pre-ribosomal-associated protein 1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D HPODL_02745 Nucleolar pre-ribosomal-associated protein 2 K14862 URB2; nucleolar pre-ribosomal-associated protein 2 D HPODL_01741 Ribosome biogenesis protein YTM1 K14863 WDR12; ribosome biogenesis protein D HPODL_05089 hypothetical protein K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C HPODL_04644 Protein BCP1 K15262 BCP1; protein BCP1 C HPODL_04852 hypothetical protein K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C HPODL_02022 rRNA methylase, putative, group 3 K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C HPODL_02704 Ribosomal RNA methyltransferase MRM2, mitochondrial K15508 MRM2; 21S rRNA (uridine2791-2'-O)-methyltransferase [EC:2.1.1.168] C HPODL_04686 putative methyltransferase K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] C HPODL_01694 hypothetical protein K19307 BMT5; 25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313] C HPODL_00121 hypothetical protein K19308 BMT6; 25S rRNA (uracil2843-N3)-methyltransferase [EC:2.1.1.312] C HPODL_04871 putative mitochondrial GTPase K19828 MTG1; mitochondrial GTPase 1 C HPODL_03846 GTPase MTG2, mitochondrial K03979 obgE; GTPase [EC:3.6.5.-] C HPODL_03396 hypothetical protein K19829 GEP3; genetic interactor of prohibitins 3, mitochondrial C HPODL_04183 Mitochondrial replication protein MTF1 K15267 MTEF1; mitochondrial transcription factor 1 C HPODL_02099 hypothetical protein K18803 HPM1; protein-histidine N-methyltransferase [EC:2.1.1.85] C HPODL_01463 hypothetical protein K27349 RKM2; ribosomal lysine N-methyltransferase 2 [EC:2.1.1.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D HPODL_04385 Nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D HPODL_00751 60S ribosomal protein L8-B K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D HPODL_02286 60S ribosomal protein L8-B K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D HPODL_04067 Centromere/microtubule-binding protein CBF5 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors B ribosomal protein modification factors B rRNA processing factors C HPODL_03688 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] B rRNA helicases B GTPases C HPODL_03846 GTPase MTG2, mitochondrial K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C HPODL_03787 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C HPODL_00107 putative GTP-binding protein K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024