+D GENES KO #

  KEGG Orthology (KO) - Oceanimonas pelagia

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ope00010] D PU634_03940 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PU634_06910 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PU634_08375 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PU634_15045 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D PU634_10665 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PU634_06915 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PU634_09545 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PU634_09555 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PU634_10670 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PU634_15010 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PU634_01785 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PU634_06530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PU634_09235 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PU634_01575 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PU634_01580 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PU634_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PU634_02125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PU634_05665 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PU634_07720 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_05660 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D PU634_11840 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PU634_06300 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PU634_16975 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PU634_03030 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:ope00020] D PU634_08370 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PU634_09940 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PU634_01605 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D PU634_00445 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PU634_03435 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D PU634_08345 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PU634_08340 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PU634_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PU634_08330 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PU634_08335 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PU634_08355 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PU634_08350 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PU634_08365 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PU634_08360 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PU634_07935 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D PU634_15035 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PU634_01695 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PU634_16975 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PU634_01575 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PU634_01580 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:ope00030] D PU634_03940 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PU634_02045 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PU634_05415 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PU634_04015 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D PU634_09915 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D PU634_12870 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D PU634_04110 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D PU634_12865 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D PU634_06300 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PU634_00705 phnN; ribose 1,5-bisphosphokinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D PU634_11310 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PU634_16825 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PU634_06525 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PU634_16445 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PU634_10665 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PU634_08375 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PU634_15045 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D PU634_06910 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:ope00040] D PU634_01150 SAF domain-containing protein K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7] D PU634_01145 UxaA family hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7] D PU634_09820 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PU634_02045 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PU634_01855 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:ope00051] D PU634_08735 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D PU634_08780 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D PU634_08770 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D PU634_01140 mandelate racemase/muconate lactonizing enzyme family protein K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90] D PU634_06910 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PU634_08375 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PU634_15045 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D PU634_08960 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D PU634_10665 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PU634_06915 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PU634_08775 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] D PU634_08955 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:ope00052] D PU634_03935 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PU634_09820 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PU634_06300 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PU634_06910 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PU634_12295 mandelate racemase/muconate lactonizing enzyme family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] C 00053 Ascorbate and aldarate metabolism D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:ope00500] D PU634_09820 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PU634_03030 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PU634_06300 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PU634_03940 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ope00520] D PU634_08510 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PU634_03030 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PU634_09085 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PU634_09445 ROK family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59] D PU634_09095 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D PU634_09090 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D PU634_15910 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PU634_10040 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D PU634_15900 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PU634_16695 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D PU634_16700 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D PU634_06170 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D PU634_13770 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PU634_14380 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PU634_06300 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PU634_09820 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PU634_03935 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PU634_03940 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PU634_08780 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D PU634_08735 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D PU634_08770 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D PU634_08775 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] C 00620 Pyruvate metabolism [PATH:ope00620] D PU634_11840 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PU634_01575 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PU634_01580 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PU634_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PU634_05665 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PU634_07720 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PU634_02125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PU634_12165 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D PU634_01025 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D PU634_12160 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PU634_06530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PU634_10110 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PU634_11850 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PU634_11855 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PU634_09010 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PU634_07940 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_05660 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D PU634_00625 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D PU634_15725 FAD-binding and (Fe-S)-binding domain-containing protein K18930 dld; D-lactate dehydrogenase D PU634_12300 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D PU634_06865 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D PU634_03355 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PU634_07960 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PU634_05560 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PU634_14625 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D PU634_01930 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D PU634_01935 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PU634_01925 OadG family transporter subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D PU634_01695 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PU634_07935 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D PU634_15035 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PU634_17050 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D PU634_16975 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PU634_09235 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PU634_10690 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D PU634_01725 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06240 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_00880 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ope00630] D PU634_11090 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D PU634_11840 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PU634_10690 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D PU634_01695 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PU634_08370 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PU634_09940 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PU634_01605 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D PU634_01725 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06240 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06235 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D PU634_15685 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D PU634_15690 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D PU634_15695 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D PU634_16875 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6] D PU634_12390 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D PU634_02050 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D PU634_07690 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D PU634_05450 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D PU634_16285 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09180 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_00585 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_11800 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PU634_04760 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PU634_09865 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PU634_09875 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PU634_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PU634_09870 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D PU634_16460 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D PU634_16455 hyi; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D PU634_16450 glxR; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D PU634_16445 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PU634_12300 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D PU634_06525 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PU634_04435 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PU634_04430 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PU634_04425 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D PU634_04785 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PU634_05710 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PU634_09470 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:ope00640] D PU634_11840 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PU634_07580 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D PU634_12165 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D PU634_01025 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D PU634_12160 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PU634_11085 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D PU634_11080 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D PU634_11075 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D PU634_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PU634_15225 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D PU634_16520 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D PU634_15515 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PU634_08865 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PU634_10110 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PU634_11850 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PU634_11855 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PU634_09010 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PU634_02510 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PU634_09810 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_12040 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_07375 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_08335 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PU634_08330 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PU634_09805 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_12035 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_12335 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_01730 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_05735 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D PU634_07595 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D PU634_05740 bifunctional 2-methylcitrate dehydratase/aconitate hydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D PU634_07590 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D PU634_07585 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D PU634_01605 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D PU634_07600 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D PU634_07790 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:ope00650] D PU634_01725 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06240 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_15515 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PU634_08865 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PU634_10855 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D PU634_06250 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D PU634_06235 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D PU634_01935 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PU634_15385 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D PU634_15380 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D PU634_05435 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D PU634_08355 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PU634_08350 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PU634_08365 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PU634_08360 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PU634_02510 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PU634_12140 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_02505 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_01070 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_01700 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D PU634_02065 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D PU634_04395 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D PU634_04390 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D PU634_16010 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PU634_00885 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PU634_00890 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PU634_16015 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:ope00660] D PU634_16010 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PU634_00885 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PU634_00890 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PU634_16015 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D PU634_08335 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PU634_08330 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PU634_00870 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PU634_00865 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PU634_00875 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ope00562] D PU634_10795 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PU634_09805 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_12035 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_12335 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_01730 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_06915 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ope00190] D PU634_08505 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D PU634_08355 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PU634_08350 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PU634_08365 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PU634_08360 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PU634_13735 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D PU634_13730 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D PU634_13725 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D PU634_14710 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PU634_16810 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PU634_16805 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D PU634_14735 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D PU634_14745 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D PU634_14750 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D PU634_14740 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D PU634_14715 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PU634_07200 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D PU634_07205 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D PU634_07210 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D PU634_07215 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D PU634_16800 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D PU634_16795 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D PU634_16790 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D PU634_02215 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PU634_02220 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PU634_15880 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PU634_15890 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PU634_15885 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PU634_15875 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PU634_15895 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PU634_15860 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PU634_15870 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PU634_15865 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PU634_14265 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D PU634_10720 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:ope00680] D PU634_04420 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D PU634_02125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PU634_02130 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D PU634_04435 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D PU634_04430 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D PU634_04425 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D PU634_11800 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PU634_04760 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PU634_05450 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D PU634_12390 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D PU634_16445 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PU634_01785 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PU634_17050 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D PU634_01695 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PU634_10665 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PU634_08375 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PU634_15045 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D PU634_06910 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PU634_15295 NAD(P)/FAD-dependent oxidoreductase K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148] D PU634_05755 torA; trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D PU634_05760 torC; pentaheme c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D PU634_11805 molecular chaperone TorD family protein K03533 torD; TorA specific chaperone D PU634_05750 torD; molecular chaperone TorD K03533 torD; TorA specific chaperone D PU634_12165 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D PU634_01025 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D PU634_12160 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PU634_11840 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PU634_09235 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PU634_15010 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PU634_03995 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PU634_06185 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PU634_12850 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:ope00910] D PU634_06445 napA; nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D PU634_06450 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D PU634_04055 nirK; copper-containing nitrite reductase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D PU634_00335 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D PU634_06815 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D PU634_07115 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PU634_15735 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PU634_16285 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09180 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_00585 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_14115 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PU634_14120 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PU634_15050 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:ope00920] D PU634_15445 cysP; thiosulfate ABC transporter substrate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D PU634_15450 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D PU634_15455 cysW; sulfate/thiosulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D PU634_15460 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D PU634_06690 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PU634_08835 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PU634_06695 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PU634_08825 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PU634_16995 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PU634_02135 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PU634_08840 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PU634_14280 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D PU634_14290 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D PU634_14285 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D PU634_15090 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PU634_14780 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D PU634_14680 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PU634_03035 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D PU634_09335 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D PU634_14010 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D PU634_17005 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ope00061] D PU634_10110 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PU634_11850 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PU634_11855 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PU634_09010 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PU634_07650 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D PU634_07660 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PU634_02860 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PU634_07665 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PU634_09035 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D PU634_07645 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PU634_09780 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_12895 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_01755 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_07655 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_00365 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_07170 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D PU634_10135 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PU634_10855 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D PU634_06615 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ope00071] D PU634_01725 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06240 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_15520 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PU634_08870 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PU634_15515 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PU634_08865 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PU634_06520 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D PU634_06615 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PU634_04610 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D PU634_02125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PU634_05665 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PU634_07720 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:ope00121] D PU634_09790 glucose 1-dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ope00561] D PU634_16445 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_07985 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PU634_07670 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D PU634_01225 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PU634_13585 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PU634_04285 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:ope00564] D PU634_14995 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D PU634_07990 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D PU634_01225 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PU634_13585 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PU634_04285 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D PU634_16720 alpha/beta fold hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5] D PU634_02705 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PU634_10165 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D PU634_16375 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PU634_12545 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D PU634_05630 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D PU634_11715 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D PU634_09030 phosphatase PAP2 family protein K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D PU634_10880 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:ope00592] D PU634_15520 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PU634_08870 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:ope01040] D PU634_12195 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D PU634_04000 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D PU634_03340 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ope00230] D PU634_01350 nudF; ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PU634_16990 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D PU634_12865 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D PU634_06300 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PU634_11310 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PU634_16825 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PU634_03630 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PU634_02460 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D PU634_11195 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PU634_02525 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D PU634_10895 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D PU634_11190 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D PU634_09350 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D PU634_09355 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D PU634_12715 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D PU634_10220 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PU634_02465 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PU634_05965 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PU634_05715 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PU634_01810 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PU634_08155 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D PU634_12860 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D PU634_09255 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D PU634_13035 yfiH; purine nucleoside phosphorylase YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PU634_14250 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D PU634_08285 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PU634_10960 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PU634_01400 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D PU634_11545 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D PU634_00970 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D PU634_00975 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D PU634_08280 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PU634_12570 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D PU634_00985 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D PU634_16735 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D PU634_06165 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PU634_06160 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PU634_09055 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PU634_14105 dgt; dGTPase K01129 dgt; dGTPase [EC:3.1.5.1] D PU634_09480 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D PU634_16725 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PU634_10725 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D PU634_00075 gppA; guanosine-5'-triphosphate,3'-diphosphate diphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D PU634_13280 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D PU634_16065 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D PU634_12455 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PU634_16250 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D PU634_03445 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D PU634_09765 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D PU634_08145 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D PU634_08680 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PU634_13275 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PU634_01360 cpdA; 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D PU634_12425 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D PU634_06690 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PU634_08835 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PU634_06695 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PU634_08825 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PU634_12935 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D PU634_01095 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D PU634_01105 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D PU634_14960 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3] D PU634_01100 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5] D PU634_14920 bifunctional allantoicase/(S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D PU634_01110 ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D PU634_05785 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D PU634_05780 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D PU634_05775 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:ope00240] D PU634_09425 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PU634_09430 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PU634_12980 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PU634_12985 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PU634_00360 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D PU634_07120 pyrD; quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D PU634_16770 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D PU634_08915 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D PU634_10180 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D PU634_10960 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PU634_13275 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PU634_13890 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D PU634_00230 M48 family metallopeptidase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D PU634_01780 pyrG; CTP synthase (glutamine hydrolyzing) K01937 pyrG; CTP synthase [EC:6.3.4.2] D PU634_08940 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D PU634_05715 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PU634_01810 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PU634_08155 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D PU634_16775 yjjG; pyrimidine 5'-nucleotidase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D PU634_03860 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D PU634_09255 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D PU634_11185 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D PU634_03445 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D PU634_09055 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PU634_07905 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D PU634_06165 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PU634_06160 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PU634_09480 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D PU634_07630 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D PU634_14905 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PU634_16830 thymidine phosphorylase family protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D PU634_13200 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D PU634_05445 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ope00250] D PU634_13345 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PU634_16325 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D PU634_04450 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D PU634_09415 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PU634_14475 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D PU634_08240 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PU634_10875 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PU634_05450 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D PU634_09135 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D PU634_12315 lyase family protein K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D PU634_04445 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D PU634_17075 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PU634_17080 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PU634_12455 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PU634_10220 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PU634_04635 aspartoacylase K01437 ASPA; aspartoacylase [EC:3.5.1.15] D PU634_12980 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PU634_12985 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PU634_02510 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PU634_12140 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_02505 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_01070 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_14115 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PU634_14120 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PU634_07115 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PU634_15735 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PU634_03390 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PU634_01245 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PU634_16285 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09180 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_00585 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09425 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PU634_09430 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PU634_03505 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D PU634_15910 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PU634_03630 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ope00260] D PU634_06030 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PU634_09125 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D PU634_09965 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PU634_17010 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PU634_02790 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PU634_09960 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D PU634_09955 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PU634_11800 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PU634_04760 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PU634_05450 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D PU634_12390 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D PU634_16445 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PU634_15010 gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PU634_03995 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PU634_06185 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PU634_12850 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PU634_14815 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D PU634_14810 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D PU634_09865 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PU634_09875 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PU634_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PU634_09870 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D PU634_04290 M24 family metallopeptidase K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D PU634_04315 M24 family metallopeptidase K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D PU634_16375 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PU634_04405 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D PU634_12105 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D PU634_04410 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D PU634_04485 aromatic ring-hydroxylating dioxygenase subunit alpha K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D PU634_04480 hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D PU634_04515 dgcA; dimethylglycine demethylation protein DgcA K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3] D PU634_04520 (Fe-S)-binding protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit D PU634_04525 electron transfer flavoprotein subunit alpha/FixB family protein K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha D PU634_04530 electron transfer flavoprotein subunit beta K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta D PU634_04775 sarcosine oxidase subunit alpha family protein K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D PU634_04765 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D PU634_04780 soxG; sarcosine oxidase subunit gamma family protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D PU634_04770 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D PU634_07920 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D PU634_16030 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PU634_03010 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D PU634_09760 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PU634_09755 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PU634_16670 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PU634_06020 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D PU634_06015 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D PU634_06025 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] D PU634_13380 M24 family metallopeptidase K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D PU634_01515 aminotransferase K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D PU634_01520 NAD-dependent succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] C 00270 Cysteine and methionine metabolism [PATH:ope00270] D PU634_14680 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PU634_03035 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D PU634_09335 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D PU634_06345 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PU634_13990 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D PU634_07735 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PU634_05410 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PU634_14125 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D PU634_08180 mtnK; S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D PU634_13035 yfiH; purine nucleoside phosphorylase YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PU634_07065 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PU634_07090 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D PU634_04870 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PU634_13110 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D PU634_13910 pyridoxal-phosphate dependent enzyme K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D PU634_06030 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PU634_09125 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D PU634_09965 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PU634_17010 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PU634_02790 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PU634_14010 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D PU634_17005 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PU634_14500 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D PU634_16020 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PU634_13055 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D PU634_05385 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D PU634_15090 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PU634_01695 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PU634_16355 D-cysteine desulfhydrase K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25] D PU634_07920 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D PU634_15465 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D PU634_03995 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PU634_06185 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ope00280] D PU634_16020 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PU634_11085 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D PU634_11080 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D PU634_11075 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D PU634_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PU634_01720 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D PU634_15515 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PU634_08865 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PU634_15520 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PU634_08870 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PU634_01750 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D PU634_02440 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D PU634_09805 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_12035 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_12335 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_01730 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_09810 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_12040 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_07375 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_02510 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PU634_01705 acetyl-CoA carboxylase biotin carboxylase subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D PU634_01715 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D PU634_01710 enoyl-CoA hydratase-related protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D PU634_01700 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D PU634_02065 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D PU634_04395 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D PU634_01725 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06240 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ope00290] D PU634_16030 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PU634_00870 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PU634_00865 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PU634_00875 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D PU634_16010 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PU634_00885 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PU634_00890 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PU634_16015 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D PU634_00115 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PU634_15575 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PU634_16025 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PU634_16020 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PU634_15560 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D PU634_10875 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PU634_00880 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ope00300] D PU634_06030 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PU634_09125 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D PU634_09965 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PU634_17010 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PU634_02790 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PU634_12115 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PU634_13445 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PU634_04715 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PU634_09435 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D PU634_03535 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D PU634_02410 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PU634_05545 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PU634_16085 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PU634_12755 type III PLP-dependent enzyme K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PU634_16080 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PU634_13390 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D PU634_13660 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PU634_13655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ope00310] D PU634_08340 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PU634_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PU634_15515 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PU634_08865 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PU634_01725 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06240 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_02510 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PU634_12140 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_02505 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_01070 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_14530 glaH; glutarate dioxygenase GlaH K15737 csiD; glutarate dioxygenase [EC:1.14.11.64] D PU634_14535 lhgO; L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D PU634_10820 FAD-binding and (Fe-S)-binding domain-containing protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:ope00220] D PU634_17070 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D PU634_17075 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PU634_17080 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PU634_05785 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D PU634_05780 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D PU634_05775 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D PU634_03505 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D PU634_16285 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09180 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_00585 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_07115 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PU634_15735 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D PU634_10875 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PU634_09120 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D PU634_17065 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D PU634_17060 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D PU634_02410 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PU634_17055 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:ope00330] D PU634_04300 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D PU634_04290 M24 family metallopeptidase K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D PU634_04315 M24 family metallopeptidase K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D PU634_03000 arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D PU634_06505 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D PU634_06555 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D PU634_06560 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D PU634_16440 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D PU634_09170 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D PU634_00575 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_00570 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-] D PU634_02415 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D PU634_06365 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D PU634_02420 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D PU634_06305 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D PU634_02240 glutamine synthetase family protein K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11] D PU634_02260 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D PU634_09185 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D PU634_02255 puuC; aldehyde dehydrogenase PuuC K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D PU634_04720 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D PU634_02245 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D PU634_16920 NAD(P)/FAD-dependent oxidoreductase K24954 ooxA; octopine oxidase subunit A D PU634_16930 FAD-dependent oxidoreductase K24955 ooxB; octopine oxidase subunit B D PU634_12085 NAD(P)-binding domain-containing protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D PU634_07715 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D PU634_01420 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D PU634_03390 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PU634_01245 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PU634_11530 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PU634_11525 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D PU634_16310 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism [PATH:ope00340] D PU634_07475 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D PU634_07510 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D PU634_07500 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D PU634_07495 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D PU634_07505 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D PU634_07490 hisB; bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D PU634_06190 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_07485 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_07480 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D PU634_12760 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D PU634_12765 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D PU634_12770 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D PU634_15165 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04635 aspartoacylase K01437 ASPA; aspartoacylase [EC:3.5.1.15] C 00350 Tyrosine metabolism [PATH:ope00350] D PU634_06190 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_07485 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_07065 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PU634_02185 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D PU634_02075 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D PU634_05900 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D PU634_02070 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D PU634_02125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PU634_05665 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PU634_07720 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PU634_12730 aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D PU634_12140 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_02505 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_01070 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:ope00360] D PU634_02270 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D PU634_06190 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_07485 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_07065 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PU634_02185 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D PU634_08085 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D PU634_15925 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D PU634_05475 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:ope00380] D PU634_08340 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PU634_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PU634_15515 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PU634_08865 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PU634_01725 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06240 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_16875 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6] D PU634_15925 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ope00400] D PU634_11475 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PU634_03310 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PU634_05340 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PU634_02020 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D PU634_11845 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D PU634_00795 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D PU634_02015 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D PU634_06195 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D PU634_06670 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D PU634_09735 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PU634_09740 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PU634_09745 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D PU634_09750 trpCF; bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D PU634_09760 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PU634_09755 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PU634_16670 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PU634_03315 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D PU634_06190 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_07485 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_07065 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PU634_02270 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ope00410] D PU634_14235 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D PU634_02510 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_14230 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D PU634_05445 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D PU634_09810 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_12040 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_07375 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_15515 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PU634_08865 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PU634_09805 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_12035 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_12335 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PU634_01730 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:ope00430] D PU634_06390 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PU634_09135 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D PU634_07115 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PU634_00995 nuclear transport factor 2 family protein K07255 tauX; taurine dehydrogenase small subunit [EC:1.4.2.-] D PU634_01000 FAD-binding oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-] D PU634_01020 xsc; sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] D PU634_01025 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D PU634_12160 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PU634_12165 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:ope00440] D PU634_00680 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D PU634_00670 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D PU634_00675 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D PU634_00695 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D PU634_00700 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D PU634_00685 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D PU634_00710 phnP; phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:ope00450] D PU634_17005 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PU634_06345 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PU634_13990 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D PU634_07735 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PU634_00135 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D PU634_03590 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PU634_06690 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PU634_08835 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PU634_06695 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PU634_08825 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PU634_07950 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D PU634_07915 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ope00460] D PU634_06390 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PU634_09415 ansA; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PU634_14475 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D PU634_11800 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PU634_04760 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ope00470] D PU634_01950 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D PU634_13625 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PU634_03505 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D PU634_14595 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D PU634_13645 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PU634_16325 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D PU634_04450 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D PU634_03010 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D PU634_16085 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PU634_12755 type III PLP-dependent enzyme K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PU634_16080 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PU634_08085 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:ope00480] D PU634_06390 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PU634_15025 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D PU634_15280 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D PU634_13055 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D PU634_05385 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D PU634_13540 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PU634_10965 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D PU634_07105 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PU634_11555 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D PU634_00155 glutathione binding-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PU634_00180 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PU634_16485 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D PU634_00445 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PU634_15270 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D PU634_01975 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D PU634_05400 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:ope00540] D PU634_10130 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D PU634_13605 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D PU634_10140 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D PU634_04280 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D PU634_10125 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D PU634_08390 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D PU634_13805 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D PU634_11275 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D PU634_13810 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D PU634_08380 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D PU634_14845 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D PU634_01295 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D PU634_08125 lpxM; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D PU634_14020 phosphatase PAP2 family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D PU634_14560 phosphatase PAP2 family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D PU634_04265 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D PU634_10790 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D PU634_14855 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D PU634_11235 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D PU634_01300 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D PU634_14055 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D PU634_14820 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D PU634_14840 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D PU634_03945 O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ope00541] D PU634_09820 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PU634_03935 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PU634_08810 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PU634_08800 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PU634_08815 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PU634_08805 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D PU634_08735 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D PU634_08780 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D PU634_08770 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D PU634_08775 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] D PU634_15900 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PU634_03925 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D PU634_03915 SDR family oxidoreductase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426] C 00550 Peptidoglycan biosynthesis [PATH:ope00550] D PU634_13770 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PU634_14380 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PU634_13630 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PU634_13645 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PU634_13660 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PU634_13625 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PU634_13655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PU634_10170 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PU634_01235 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PU634_13650 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PU634_13635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PU634_08150 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D PU634_01985 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PU634_14180 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D PU634_11430 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PU634_13665 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PU634_11450 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PU634_10865 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:ope00552] D PU634_01235 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PU634_03925 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ope00543] D PU634_14680 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PU634_03900 glycosyltransferase family 2 protein K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ope00730] D PU634_15350 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D PU634_16150 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D PU634_15345 thiE; thiamine phosphate synthase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D PU634_15340 moeB; molybdopterin-synthase adenylyltransferase MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D PU634_11000 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PU634_11650 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PU634_15325 thiH; 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D PU634_11675 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PU634_15330 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D PU634_15305 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D PU634_15300 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D PU634_11720 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D PU634_12540 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PU634_08680 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PU634_01775 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:ope00740] D PU634_08945 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PU634_11780 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PU634_11790 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PU634_16100 HAD-IA family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D PU634_11730 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D PU634_11785 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D PU634_07345 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D PU634_13170 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D PU634_00100 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D PU634_06630 nfsA; oxygen-insensitive NADPH nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38] D PU634_12510 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D PU634_15305 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D PU634_01350 nudF; ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PU634_10205 NUDIX hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D PU634_14255 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:ope00750] D PU634_09985 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D PU634_12080 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D PU634_10675 epd; erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D PU634_09025 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D PU634_06185 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PU634_12410 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D PU634_13295 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D PU634_09955 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:ope00760] D PU634_13345 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PU634_09560 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D PU634_01555 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D PU634_02275 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D PU634_12860 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D PU634_05715 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D PU634_01810 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PU634_08155 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D PU634_11415 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D PU634_13275 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PU634_13120 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D PU634_01880 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D PU634_02280 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D PU634_07285 cobB; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D PU634_10090 nadK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D PU634_12945 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D PU634_12940 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D PU634_05435 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D PU634_12140 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_02505 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PU634_01070 aldehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:ope00770] D PU634_16010 ilvG; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PU634_00885 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PU634_00890 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PU634_16015 ilvM; acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D PU634_00115 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PU634_15575 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PU634_16025 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PU634_14225 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D PU634_11645 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D PU634_14230 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D PU634_14370 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D PU634_14900 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D PU634_13275 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PU634_14875 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D PU634_01530 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D PU634_11125 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D PU634_11065 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D PU634_16020 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PU634_05445 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D PU634_14235 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:ope00780] D PU634_08655 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D PU634_09035 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D PU634_07645 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PU634_09780 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_12895 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_01755 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_07655 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_00365 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_10135 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PU634_14980 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D PU634_08660 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PU634_08670 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D PU634_08650 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D PU634_08665 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D PU634_14375 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ope00785] D PU634_11460 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D PU634_11465 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D PU634_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PU634_01575 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PU634_01580 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PU634_08345 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PU634_08340 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PU634_11085 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D PU634_11080 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D PU634_11075 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D PU634_09865 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PU634_09875 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PU634_09870 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ope00790] D PU634_06485 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D PU634_07575 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D PU634_09680 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D PU634_01230 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D PU634_14220 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D PU634_10045 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D PU634_12430 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PU634_09005 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D PU634_08945 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PU634_11780 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PU634_02405 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D PU634_07930 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D PU634_07640 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D PU634_09225 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PU634_02265 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D PU634_02270 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D PU634_07335 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33] D PU634_09220 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PU634_09230 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PU634_03460 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D PU634_06430 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PU634_06465 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PU634_06475 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PU634_06460 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D PU634_06480 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PU634_09395 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:ope00670] D PU634_12430 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PU634_04230 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D PU634_11800 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PU634_04760 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PU634_11195 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PU634_02465 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PU634_00750 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PU634_09875 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PU634_13990 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D PU634_13200 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D PU634_04785 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PU634_05710 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PU634_09470 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PU634_14520 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D PU634_09910 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ope00860] D PU634_12225 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PU634_11295 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D PU634_14170 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PU634_00070 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PU634_16060 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D PU634_16055 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D PU634_12825 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D PU634_00785 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D PU634_16245 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D PU634_15500 hemG; menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D PU634_08675 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D PU634_16050 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D PU634_14275 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D PU634_14710 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PU634_16810 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PU634_14715 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PU634_01060 AAA family ATPase K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D PU634_01055 cobalamin biosynthesis protein CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D PU634_14615 ATP--cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PU634_08495 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PU634_08500 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D PU634_14130 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D PU634_12235 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D PU634_08585 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D PU634_08580 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D PU634_08590 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D PU634_02685 hutZ; heme utilization protein HutZ K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D PU634_02095 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D PU634_02100 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ope00130] D PU634_14765 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D PU634_14760 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PU634_00095 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D PU634_14255 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PU634_09880 FAD-dependent oxidoreductase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D PU634_06175 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D PU634_09885 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D PU634_00035 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D PU634_11365 FAD-dependent monooxygenase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D PU634_15360 o-succinylbenzoic acid (OSB) synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D PU634_10810 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D PU634_15355 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D PU634_07855 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D PU634_02290 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D PU634_02185 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ope00900] D PU634_11675 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PU634_10160 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D PU634_01795 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D PU634_11305 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D PU634_01800 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D PU634_10935 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D PU634_13150 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D PU634_01725 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06240 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_14255 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PU634_11670 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D PU634_12450 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D PU634_10170 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:ope00907] D PU634_15515 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PU634_08865 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PU634_01700 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D PU634_15520 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PU634_08870 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D PU634_05415 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ope00523] D PU634_08810 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PU634_08800 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PU634_08815 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PU634_08805 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:ope01054] D PU634_16325 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D PU634_04450 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D PU634_08800 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:ope00332] D PU634_11530 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PU634_11525 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ope00261] D PU634_06690 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PU634_08835 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PU634_06695 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PU634_08825 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PU634_06030 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PU634_09125 lysC; lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D PU634_09965 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PU634_17010 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PU634_02790 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PU634_12115 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PU634_13445 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PU634_04715 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PU634_09435 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ope00521] D PU634_06300 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PU634_10795 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PU634_08810 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PU634_08800 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PU634_08815 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PU634_08805 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:ope00525] D PU634_08810 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PU634_08800 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ope00401] D PU634_03315 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D PU634_06190 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_07485 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_07065 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D PU634_09735 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PU634_09740 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D PU634_07660 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PU634_09780 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_12895 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_01755 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_07655 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_00365 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D PU634_07650 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:ope00999] D PU634_05410 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PU634_00795 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ope00362] D PU634_15415 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D PU634_15420 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D PU634_15425 benC; benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D PU634_15430 benD; benzoate diol dehydrogenase BenD K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D PU634_15410 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D PU634_15400 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D PU634_15405 catC; muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D PU634_15370 alpha/beta fold hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D PU634_15520 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PU634_08870 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PU634_15375 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D PU634_05475 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PU634_00025 2-hydroxymuconate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PU634_08865 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PU634_15515 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PU634_01935 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PU634_01725 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06240 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:ope00627] D PU634_07940 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D PU634_14255 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:ope00364] D PU634_15415 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D PU634_15420 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D PU634_15425 benC; benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D PU634_15430 benD; benzoate diol dehydrogenase BenD K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D PU634_15410 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D PU634_07970 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D PU634_15400 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:ope00625] D PU634_05665 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PU634_07720 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PU634_02125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PU634_12310 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04600 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PU634_04420 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ope00361] D PU634_15410 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D PU634_07970 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D PU634_15400 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00623 Toluene degradation [PATH:ope00623] D PU634_15410 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D PU634_15400 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D PU634_07970 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:ope00622] D PU634_15415 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D PU634_15420 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D PU634_15425 benC; benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D PU634_15430 benD; benzoate diol dehydrogenase BenD K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D PU634_00025 2-hydroxymuconate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PU634_05475 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation [PATH:ope00633] D PU634_07835 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D PU634_15520 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PU634_08870 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:ope00643] D PU634_02075 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D PU634_05900 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D PU634_02070 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D PU634_15385 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D PU634_15380 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation D PU634_05785 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D PU634_05780 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D PU634_05775 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:ope00930] D PU634_15515 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PU634_08865 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:ope00621] D PU634_00025 2-hydroxymuconate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PU634_05475 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00626 Naphthalene degradation [PATH:ope00626] D PU634_05665 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D PU634_07720 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PU634_02125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ope03020] D PU634_14305 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PU634_14300 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PU634_17215 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PU634_16730 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ope03010] D PU634_08935 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PU634_10190 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PU634_17120 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PU634_17210 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PU634_17175 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PU634_13090 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PU634_00925 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PU634_17160 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PU634_13745 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PU634_17085 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PU634_17205 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PU634_00920 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PU634_17200 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PU634_17155 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PU634_09995 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PU634_13245 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PU634_17135 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PU634_13085 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PU634_17110 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PU634_13180 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PU634_01215 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D PU634_14320 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PU634_17105 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PU634_17090 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PU634_17095 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PU634_17150 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PU634_17165 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PU634_14310 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PU634_13080 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PU634_14315 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PU634_14325 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PU634_13750 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PU634_17140 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PU634_17185 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PU634_17125 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PU634_17220 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PU634_17170 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PU634_13230 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PU634_07305 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PU634_12445 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PU634_17115 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PU634_17100 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PU634_17145 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PU634_06065 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D PU634_12440 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PU634_14890 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D PU634_17130 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PU634_17180 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PU634_14635 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PU634_07675 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D PU634_14885 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PU634_15615 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PU634_07310 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PU634_17195 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PU634_00835 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PU634_00020 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ope00970] D PU634_12205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PU634_12215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PU634_04225 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PU634_16410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PU634_06215 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PU634_03380 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PU634_12345 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PU634_13000 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PU634_14565 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PU634_06405 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PU634_10030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PU634_07130 tRNA-Met K14230 tRNA-Met; tRNA Met D PU634_13405 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PU634_13410 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PU634_13415 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PU634_06605 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PU634_08230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PU634_07360 tRNA-Val K14237 tRNA-Val; tRNA Val D PU634_09570 tRNA-Val K14237 tRNA-Val; tRNA Val D PU634_09580 tRNA-Val K14237 tRNA-Val; tRNA Val D PU634_12225 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PU634_06255 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PU634_01895 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PU634_09685 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PU634_04305 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PU634_05815 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PU634_15545 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PU634_15550 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PU634_07320 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PU634_03620 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PU634_04250 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PU634_07915 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PU634_00750 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PU634_13550 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PU634_11400 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PU634_13165 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PU634_01510 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PU634_14650 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PU634_10095 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PU634_10930 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PU634_07300 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PU634_07295 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PU634_14145 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PU634_02055 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ope03060] D PU634_17190 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PU634_14335 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PU634_10035 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PU634_11040 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PU634_11035 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D PU634_11045 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PU634_15630 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PU634_13600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PU634_15000 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D PU634_13250 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PU634_15070 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PU634_00540 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PU634_00050 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D PU634_00060 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D PU634_13315 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PU634_13160 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ope04122] D PU634_11000 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PU634_15090 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PU634_11145 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PU634_15525 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PU634_00915 tusB; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D PU634_00910 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D PU634_00905 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D PU634_08995 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D PU634_10210 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PU634_06475 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PU634_06430 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PU634_06470 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D PU634_06465 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PU634_06460 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D PU634_11650 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PU634_15335 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D PU634_15340 moeB; molybdopterin-synthase adenylyltransferase MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:ope03018] D PU634_13215 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D PU634_07700 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D PU634_00080 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D PU634_01785 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PU634_09990 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PU634_02700 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PU634_04555 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PU634_13105 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D PU634_10805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PU634_16115 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PU634_00090 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D PU634_06910 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PU634_10080 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PU634_12600 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PU634_12475 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PU634_13440 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PU634_10720 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PU634_14215 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ope03030] D PU634_11835 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_03370 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_03405 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_10115 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PU634_05970 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PU634_07625 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PU634_11410 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PU634_13545 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PU634_15590 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PU634_01945 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PU634_01205 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PU634_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PU634_03365 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PU634_10120 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PU634_16145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PU634_03060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ope03410] D PU634_06870 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PU634_04005 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PU634_13395 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D PU634_14880 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PU634_15540 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D PU634_02820 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PU634_16145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PU634_01475 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PU634_03060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ope03420] D PU634_08435 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PU634_13930 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D PU634_09070 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D PU634_05625 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D PU634_16105 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PU634_16145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PU634_03060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ope03430] D PU634_01835 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D PU634_12485 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D PU634_13220 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D PU634_16105 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PU634_06000 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D PU634_08290 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PU634_11665 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PU634_01475 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PU634_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PU634_10115 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PU634_15590 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PU634_05970 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PU634_11410 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PU634_07625 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PU634_11835 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_03370 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_03405 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_13545 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PU634_03060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PU634_02030 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:ope03440] D PU634_01475 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PU634_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PU634_15585 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D PU634_13300 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D PU634_05980 recR; recombination mediator RecR K06187 recR; recombination protein RecR D PU634_01885 recA; recombinase RecA K03553 recA; recombination protein RecA D PU634_16145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PU634_09665 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PU634_09660 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PU634_09670 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PU634_16370 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PU634_06125 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D PU634_06120 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D PU634_06130 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D PU634_10115 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PU634_15590 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PU634_05970 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PU634_11410 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PU634_07625 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PU634_11835 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_03370 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_03405 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_13545 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PU634_14640 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D PU634_09830 DnaT-like ssDNA-binding domain-containing protein K02317 dnaT; DNA replication protein DnaT C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:ope03250] D PU634_11630 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ope02010] D PU634_15445 cysP; thiosulfate ABC transporter substrate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D PU634_15450 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D PU634_15455 cysW; sulfate/thiosulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D PU634_15460 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D PU634_09930 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D PU634_09925 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D PU634_09920 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PU634_06590 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D PU634_01305 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PU634_01650 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PU634_01655 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PU634_01660 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PU634_00855 thiB; thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D PU634_00850 thiP; thiamine/thiamine pyrophosphate ABC transporter permease K02063 thiP; thiamine transport system permease protein D PU634_00845 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D PU634_14005 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D PU634_07280 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D PU634_07275 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein D PU634_07270 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein D PU634_07265 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D PU634_09165 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D PU634_09150 potI; putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein D PU634_09155 potH; putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein D PU634_09160 potG; putrescine ABC transporter ATP-binding subunit PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D PU634_12130 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D PU634_00390 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D PU634_00375 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D PU634_00385 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D PU634_00380 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D PU634_13785 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D PU634_13790 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PU634_13950 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PU634_13795 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PU634_13960 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PU634_13780 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D PU634_13800 mlaF; phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PU634_13955 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PU634_02660 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D PU634_04115 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D PU634_04120 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D PU634_04125 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PU634_04130 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D PU634_10745 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D PU634_10710 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D PU634_10705 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D PU634_10700 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PU634_12910 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D PU634_00655 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D PU634_00660 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D PU634_12900 ABC transporter permease K02042 phnE; phosphonate transport system permease protein D PU634_12905 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D PU634_00650 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D PU634_01680 transporter substrate-binding domain-containing protein K09997 artI; arginine transport system substrate-binding protein D PU634_01690 artM; arginine ABC transporter permease ArtM K09998 artM; arginine transport system permease protein D PU634_01685 artQ; arginine ABC transporter permease ArtQ K09999 artQ; arginine transport system permease protein D PU634_01675 ATP-binding cassette domain-containing protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D PU634_09265 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D PU634_01500 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D PU634_01495 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D PU634_01490 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D PU634_01485 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D PU634_15600 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein D PU634_15605 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein D PU634_15610 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein D PU634_02805 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D PU634_08315 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D PU634_02815 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein D PU634_02810 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D PU634_02800 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D PU634_14805 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PU634_14800 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D PU634_14795 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D PU634_14790 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D PU634_14785 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PU634_14095 metQ; methionine ABC transporter substrate-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D PU634_09215 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D PU634_14090 ABC transporter permease K02072 metI; D-methionine transport system permease protein D PU634_14085 metN; methionine ABC transporter ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D PU634_05565 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PU634_05570 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D PU634_05575 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D PU634_05580 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D PU634_05585 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D PU634_04160 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D PU634_04155 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein D PU634_04150 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein D PU634_04145 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein D PU634_04140 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein D PU634_14070 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D PU634_14080 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein D PU634_14075 ABC transporter permease subunit K13895 yejE; microcin C transport system permease protein D PU634_14135 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D PU634_05330 btuC; vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein D PU634_05335 ATP-binding cassette domain-containing protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D PU634_12815 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D PU634_00275 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D PU634_12805 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein D PU634_00285 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D PU634_12810 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PU634_00280 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PU634_15660 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D PU634_15650 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein D PU634_15645 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D PU634_15655 manganese/iron ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein D PU634_08725 chain-length determining protein K10107 kpsE; capsular polysaccharide transport system permease protein D PU634_08715 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D PU634_08720 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D PU634_08415 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D PU634_08425 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D PU634_08420 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D PU634_03270 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D PU634_03265 heme ABC transporter permease K02195 ccmC; heme exporter protein C D PU634_03260 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D PU634_03255 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D PU634_13535 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D PU634_13530 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D PU634_13825 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D PU634_15060 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D PU634_15065 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D PU634_08395 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D PU634_15230 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D PU634_06135 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D PU634_02355 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PU634_03950 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB C 02060 Phosphotransferase system (PTS) [PATH:ope02060] D PU634_03030 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PU634_09085 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PU634_08965 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D PU634_08955 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PU634_08960 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D PU634_13210 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D PU634_13850 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D PU634_13840 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:ope03070] D PU634_01345 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D PU634_15790 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D PU634_15745 type II secretion system F family protein K02455 gspF; general secretion pathway protein F D PU634_15750 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D PU634_15755 GspH/FimT family protein K02457 gspH; general secretion pathway protein H D PU634_15760 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I D PU634_15765 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D PU634_15770 type II secretion system protein GspK K02460 gspK; general secretion pathway protein K D PU634_15775 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D PU634_15780 gspM; type II secretion system protein GspM K02462 gspM; general secretion pathway protein M D PU634_15740 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D PU634_11040 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PU634_11035 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D PU634_14335 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PU634_10035 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PU634_17190 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PU634_11045 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PU634_15630 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PU634_13600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PU634_15070 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PU634_15000 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D PU634_13250 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PU634_00050 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D PU634_00060 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:ope02020] D PU634_10750 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PU634_10755 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D PU634_07575 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D PU634_10745 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D PU634_12925 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_03730 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_06770 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_12930 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D PU634_03680 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D PU634_06745 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D PU634_03200 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D PU634_11660 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D PU634_03225 flagellar motor protein K02556 motA; chemotaxis protein MotA D PU634_05760 torC; pentaheme c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D PU634_05755 torA; trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D PU634_11805 molecular chaperone TorD family protein K03533 torD; TorA specific chaperone D PU634_05750 torD; molecular chaperone TorD K03533 torD; TorA specific chaperone D PU634_14110 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D PU634_10660 arcA; two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D PU634_01310 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D PU634_01315 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D PU634_14430 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D PU634_01330 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D PU634_14425 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D PU634_01325 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D PU634_14420 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D PU634_01320 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D PU634_14715 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PU634_15595 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PU634_12150 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PU634_04075 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PU634_02575 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D PU634_05560 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PU634_03875 rcsF; Rcs stress response system protein RcsF K06080 rcsF; RcsF protein D PU634_13290 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D PU634_05620 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D PU634_01900 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D PU634_05830 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA D PU634_05845 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D PU634_05850 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D PU634_05875 cellulose synthase operon protein YhjQ/BcsQ K02282 cpaE; pilus assembly protein CpaE D PU634_05880 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PU634_05885 type II secretion system F family protein K12510 tadB; tight adherence protein B D PU634_05890 type II secretion system F family protein K12511 tadC; tight adherence protein C D PU634_03540 glnD; bifunctional uridylyltransferase/uridylyl-removing protein GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D PU634_13115 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D PU634_16260 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PU634_16255 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D PU634_16285 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09180 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_00585 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_02205 sigma-54 dependent transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D PU634_01725 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06240 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_02755 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D PU634_00520 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D PU634_00515 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D PU634_02750 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D PU634_13830 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D PU634_14465 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PU634_14455 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D PU634_02935 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PU634_11550 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_13555 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_13590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_02195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_04030 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_07000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_07060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_07965 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_08320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_08450 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_00715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_01120 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_01480 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_01595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_04325 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D PU634_06385 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D PU634_00450 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D PU634_03240 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PU634_03245 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PU634_03215 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PU634_03205 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PU634_03220 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PU634_02930 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D PU634_15920 substrate-binding domain-containing protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP D PU634_00425 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D PU634_05465 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D PU634_05360 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D PU634_05365 response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR D PU634_03095 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D PU634_03100 HAMP domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D PU634_03105 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D PU634_12710 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PU634_03505 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D PU634_13735 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D PU634_13730 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D PU634_13725 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D PU634_07200 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D PU634_07205 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D PU634_07210 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D PU634_07215 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D PU634_02215 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PU634_02220 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PU634_01345 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D PU634_11990 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D PU634_07705 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D PU634_02920 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D PU634_13735 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ope02024] D PU634_13110 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D PU634_15920 substrate-binding domain-containing protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP D PU634_12475 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PU634_13440 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PU634_09735 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PU634_09740 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PU634_11475 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PU634_03310 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PU634_05340 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PU634_14465 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PU634_14455 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D PU634_05350 putative quinol monooxygenase K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] D PU634_02320 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D PU634_02305 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D PU634_02310 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D PU634_02300 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D PU634_14805 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PU634_14800 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D PU634_14795 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D PU634_14790 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D PU634_14785 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PU634_06615 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PU634_12710 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PU634_01960 zur; zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D PU634_08945 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PU634_11790 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PU634_05565 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PU634_05570 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D PU634_05575 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D PU634_05580 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D PU634_05585 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D PU634_11705 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PU634_15265 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PU634_11700 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PU634_15260 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PU634_11695 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PU634_15255 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PU634_11710 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PU634_14065 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PU634_15250 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PU634_14060 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D PU634_15630 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PU634_14335 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PU634_10035 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PU634_17190 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PU634_11045 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PU634_13600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PU634_15070 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PU634_15000 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D PU634_13250 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:ope02030] D PU634_11550 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_13555 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_13590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_02195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_04030 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_07000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_07060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_07965 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_08320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_08450 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_00715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_01120 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_01480 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_01595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_04325 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D PU634_06385 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D PU634_00450 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D PU634_04115 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D PU634_03215 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PU634_03240 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PU634_03245 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PU634_03205 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PU634_03210 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D PU634_03220 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PU634_02930 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D PU634_02935 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PU634_03120 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D PU634_03150 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D PU634_03155 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PU634_11660 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D PU634_03225 flagellar motor protein K02556 motA; chemotaxis protein MotA D PU634_11655 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PU634_03230 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:ope02040] D PU634_03110 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D PU634_03115 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D PU634_03120 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D PU634_03125 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D PU634_03130 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PU634_03135 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D PU634_14770 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D PU634_03145 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D PU634_03150 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D PU634_03155 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PU634_03160 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D PU634_03165 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D PU634_03170 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PU634_03175 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D PU634_03185 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PU634_03180 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PU634_02925 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D PU634_02940 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D PU634_02945 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D PU634_02950 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D PU634_02960 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D PU634_02965 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D PU634_02970 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D PU634_02975 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D PU634_02980 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D PU634_02985 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D PU634_02990 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D PU634_02995 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D PU634_02910 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP D PU634_13270 flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX D PU634_08140 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D PU634_03080 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D PU634_03090 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D PU634_11660 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D PU634_03225 flagellar motor protein K02556 motA; chemotaxis protein MotA D PU634_11655 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PU634_03230 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PU634_02920 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D PU634_02915 flgN; flagellar export chaperone FlgN K02399 flgN; flagellar biosynthesis protein FlgN D PU634_01200 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D PU634_03095 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D PU634_13830 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D PU634_03105 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D PU634_03200 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D PU634_01785 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:ope04980] D PU634_14615 ATP--cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PU634_13990 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ope01501] D PU634_11635 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D PU634_08510 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PU634_05565 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PU634_05570 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D PU634_05575 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D PU634_05580 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D PU634_05585 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D PU634_16405 TetR/AcrR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D PU634_16400 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_02830 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_06790 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_16395 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PU634_06795 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PU634_01345 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D PU634_01985 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PU634_11430 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PU634_13665 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ope01502] D PU634_12150 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PU634_04075 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PU634_13625 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PU634_01950 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D PU634_13655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PU634_13650 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PU634_13635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ope01503] D PU634_04265 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D PU634_04160 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D PU634_04155 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein D PU634_04150 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein D PU634_04145 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein D PU634_04140 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein D PU634_12490 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PU634_06270 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS D PU634_15995 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D PU634_11630 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D PU634_16400 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_02830 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_06790 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_16395 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PU634_06795 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PU634_01345 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D PU634_10130 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ope01000] C 01001 Protein kinases [BR:ope01001] D PU634_10750 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PU634_12925 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_03730 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_06770 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_14110 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D PU634_01310 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D PU634_13290 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D PU634_01175 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D PU634_16260 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PU634_14465 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PU634_02755 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D PU634_00520 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D PU634_03215 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PU634_05360 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D PU634_03100 HAMP domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D PU634_08090 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ope01009] D PU634_06910 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PU634_08860 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D PU634_12850 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:ope01002] D PU634_13160 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D PU634_01535 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D PU634_05835 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D PU634_08280 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PU634_02245 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D PU634_11820 type 1 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D PU634_00580 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase D PU634_11120 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D PU634_03630 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PU634_14115 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PU634_15910 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PU634_08240 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PU634_06270 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS D PU634_03040 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D PU634_05825 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D PU634_07105 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PU634_16490 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D PU634_12150 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PU634_04075 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PU634_13060 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D PU634_13540 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PU634_10965 pepB; aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D PU634_01850 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PU634_04505 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PU634_05545 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PU634_11555 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D PU634_09200 M20 family metallopeptidase K01451 hipO; hippurate hydrolase [EC:3.5.1.32] D PU634_12820 mepM; murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D PU634_10195 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PU634_16380 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D PU634_02870 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D PU634_10050 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PU634_08645 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D PU634_02200 M48 family metallopeptidase K07387 K07387; metalloprotease [EC:3.4.24.-] D PU634_11150 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D PU634_10155 rseP; sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D PU634_07980 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D PU634_12950 zinc-dependent peptidase K09933 mtfA; MtfA peptidase D PU634_13760 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-] D PU634_13765 degS; outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-] D PU634_15110 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D PU634_11450 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PU634_10865 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D PU634_05595 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PU634_05605 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D PU634_07175 AAA family ATPase K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D PU634_14755 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D PU634_02395 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D PU634_13315 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PU634_16310 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D PU634_07100 prc; carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D PU634_09410 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D PU634_06360 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D PU634_14775 glpG; rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D PU634_14660 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D PU634_06390 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PU634_10775 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-] D PU634_11025 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D PU634_11020 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D PU634_13860 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein D PU634_13870 tldD; metalloprotease TldD K03568 tldD; TldD protein D PU634_12460 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D PU634_12465 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:ope01003] D PU634_08150 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D PU634_14180 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D PU634_01985 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PU634_03900 glycosyltransferase family 2 protein K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ope01005] D PU634_10130 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D PU634_10125 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D PU634_13605 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D PU634_10140 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D PU634_04280 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D PU634_08390 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D PU634_01295 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D PU634_08125 lpxM; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D PU634_14020 phosphatase PAP2 family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D PU634_14560 phosphatase PAP2 family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D PU634_14845 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D PU634_10790 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D PU634_04265 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D PU634_14855 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D PU634_11275 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D PU634_08380 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D PU634_13810 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D PU634_13805 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D PU634_14865 glycosyltransferase family 2 protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-] D PU634_14840 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D PU634_03945 O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D PU634_14860 glycosyltransferase family 9 protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D PU634_11235 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D PU634_14055 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D PU634_01300 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D PU634_14820 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D PU634_03920 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ope01011] D PU634_13770 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PU634_14380 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PU634_13630 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PU634_13645 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PU634_13660 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PU634_13625 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PU634_01950 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D PU634_14595 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D PU634_13650 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PU634_13635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PU634_01235 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PU634_13175 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D PU634_01985 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PU634_14180 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D PU634_11430 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PU634_13665 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PU634_11450 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PU634_10865 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D PU634_08150 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D PU634_06270 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS D PU634_03040 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D PU634_05825 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D PU634_12150 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PU634_04075 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PU634_07980 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D PU634_11120 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D PU634_12820 mepM; murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D PU634_03330 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PU634_11440 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D PU634_05700 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D PU634_03350 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D PU634_10900 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D PU634_07635 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D PU634_11445 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PU634_08595 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PU634_12490 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PU634_01565 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D PU634_06265 LPP leucine zipper domain-containing protein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:ope01004] D PU634_07660 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PU634_02860 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PU634_07665 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PU634_09035 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D PU634_07645 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PU634_09780 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_12895 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_01755 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_07655 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_00365 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PU634_07170 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D PU634_10135 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PU634_10855 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D PU634_12195 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D PU634_04000 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D PU634_03340 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D PU634_11840 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PU634_07580 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D PU634_02065 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D PU634_04395 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D PU634_06615 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PU634_07670 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D PU634_01225 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PU634_13585 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:ope01008] D PU634_16325 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D PU634_04450 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:ope01006] D PU634_11670 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D PU634_12450 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D PU634_10170 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PU634_12480 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PU634_15355 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D PU634_14760 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PU634_14710 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PU634_16810 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:ope01007] D PU634_12225 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PU634_06255 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PU634_14210 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D PU634_14145 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PU634_02055 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PU634_04250 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PU634_14650 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PU634_07915 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PU634_13165 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PU634_13550 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PU634_11400 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PU634_01510 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PU634_09685 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PU634_04305 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PU634_05815 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PU634_10930 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PU634_15545 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PU634_15550 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PU634_03620 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PU634_10095 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PU634_07320 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PU634_01895 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PU634_07300 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PU634_07295 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PU634_15560 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D PU634_10875 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PU634_07065 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PU634_06190 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_07485 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PU634_14815 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D PU634_08660 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PU634_06345 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PU634_09810 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_12040 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_07375 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PU634_02410 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PU634_02510 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PU634_06020 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D PU634_09170 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D PU634_00575 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D PU634_08670 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D PU634_14170 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PU634_16020 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PU634_05450 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D PU634_06185 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ope00194] D PU634_15895 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PU634_15890 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PU634_15885 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PU634_15880 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PU634_15875 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PU634_15870 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PU634_15865 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PU634_15860 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PU634_15855 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ope03000] D PU634_04870 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PU634_04500 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D PU634_04755 helix-turn-helix domain-containing protein K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D PU634_12065 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PU634_12340 gcvA; transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PU634_12680 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PU634_03415 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PU634_04640 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PU634_04585 gcvA; transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PU634_12270 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PU634_00110 ilvY; HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D PU634_07745 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D PU634_13190 nhaR; transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D PU634_01980 oxyR; DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D PU634_14510 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PU634_06860 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D PU634_06620 LysR family transcriptional regulator K18927 lldR; LysR family transcriptional regulator, L-lactate utilization regulator D PU634_16360 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D PU634_04455 LysR substrate-binding domain-containing protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D PU634_01015 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D PU634_12120 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D PU634_02500 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D PU634_04060 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D PU634_09375 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D PU634_15395 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D PU634_00790 hdfR; HTH-type transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D PU634_04105 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PU634_00665 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D PU634_12780 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D PU634_07400 fadR; fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D PU634_01570 pdhR; pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PU634_02640 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PU634_01005 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PU634_14525 csiR; DNA-binding transcriptional regulator CsiR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D PU634_04415 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D PU634_16405 TetR/AcrR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D PU634_14910 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D PU634_00960 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PU634_15220 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PU634_15100 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D PU634_14480 asnC; transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D PU634_16910 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PU634_03385 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PU634_03595 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PU634_02160 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PU634_13385 Lrp/AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes D PU634_09330 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D PU634_16265 slyA; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D PU634_15980 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D PU634_02470 zntR; Zn(2+)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D PU634_09530 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D PU634_06260 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PU634_01960 zur; zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D PU634_16430 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D PU634_15390 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D PU634_12710 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PU634_07240 FNR family transcription factor K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D PU634_11005 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D PU634_13265 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D PU634_00305 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D PU634_13185 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D PU634_06535 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D PU634_14375 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PU634_11885 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PU634_02250 puuR; HTH-type transcriptional regulator PuuR K14056 puuR; HTH-type transcriptional regulator, repressor for puuD D PU634_03095 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D PU634_00210 VpsR-related response regulator K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation D PU634_05655 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D PU634_00345 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D PU634_09935 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein D PU634_17000 metJ; met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D PU634_03390 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PU634_01245 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PU634_16640 rcnR; Ni(II)/Co(II)-binding transcriptional repressor RcnR K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression D PU634_03735 rcnR; Ni(II)/Co(II)-binding transcriptional repressor RcnR K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression D PU634_11610 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D PU634_15850 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PU634_14100 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D PU634_01670 argR; transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism D PU634_09100 ROK family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor D PU634_01775 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D PU634_04800 tyrR; transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D PU634_05520 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D PU634_04165 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D PU634_04180 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D PU634_14545 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D PU634_03815 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D PU634_05380 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D PU634_14205 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PU634_11795 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D PU634_11535 crl; sigma factor-binding protein Crl K11926 crl; sigma factor-binding protein Crl D PU634_04990 Cro/CI family transcriptional regulator K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D PU634_13680 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ope03021] D PU634_17215 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PU634_14305 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PU634_14300 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PU634_16730 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PU634_01200 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D PU634_01830 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D PU634_13340 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PU634_08875 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PU634_15055 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D PU634_13830 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D PU634_03200 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D PU634_12375 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D PU634_10015 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D PU634_11725 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D PU634_14330 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PU634_13720 sspA; stringent starvation protein SspA K03599 sspA; stringent starvation protein A D PU634_13715 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D PU634_11985 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist D PU634_13335 RseA family anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA D PU634_13330 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB D PU634_13325 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC D PU634_14205 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PU634_10070 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D PU634_16870 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D PU634_00090 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D PU634_16905 Rho-binding antiterminator K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:ope03019] D PU634_07700 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D PU634_13885 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D PU634_13310 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PU634_13105 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D PU634_12535 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D PU634_00080 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D PU634_02700 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PU634_04555 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PU634_10805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PU634_16115 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PU634_01785 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PU634_09990 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PU634_00090 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D PU634_06910 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PU634_10080 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PU634_12600 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PU634_12475 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PU634_13440 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PU634_10720 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PU634_14215 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D PU634_13215 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D PU634_01900 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D PU634_13915 EAL domain-containing protein K18765 csrD; RNase E specificity factor CsrD D PU634_10230 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A D PU634_14670 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D PU634_13580 rraB; ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B D PU634_13845 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D PU634_06060 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D PU634_14185 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:ope03011] D PU634_08935 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PU634_10190 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PU634_17120 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PU634_17210 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PU634_17175 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PU634_13090 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PU634_00925 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PU634_17160 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PU634_13745 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PU634_17085 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PU634_17205 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PU634_00920 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PU634_17200 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PU634_17155 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PU634_09995 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PU634_13245 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PU634_17135 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PU634_13085 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PU634_17110 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PU634_13180 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PU634_01215 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D PU634_14320 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PU634_17105 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PU634_17090 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PU634_17095 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PU634_17150 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PU634_17165 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PU634_13080 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PU634_14315 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PU634_14325 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PU634_14310 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PU634_13750 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PU634_17140 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PU634_17185 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PU634_17125 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PU634_17220 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PU634_17170 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PU634_13230 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PU634_07305 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PU634_12445 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PU634_17115 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PU634_17100 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PU634_17145 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PU634_12440 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PU634_14890 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D PU634_17130 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PU634_17180 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PU634_14635 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PU634_07675 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D PU634_14885 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PU634_15615 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PU634_07310 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PU634_17195 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PU634_06065 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D PU634_00835 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PU634_00020 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:ope03009] D PU634_13310 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PU634_12535 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D PU634_13305 era; GTPase Era K03595 era; GTPase D PU634_12435 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D PU634_14205 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PU634_10015 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D PU634_11725 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D PU634_14330 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PU634_16215 rsuA; 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D PU634_12415 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D PU634_00745 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PU634_13450 rsmC; 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D PU634_15075 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D PU634_05390 rsmE; 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D PU634_15840 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PU634_13675 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D PU634_13690 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D PU634_16500 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D PU634_13100 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D PU634_10055 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D PU634_11620 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D PU634_11425 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D PU634_07945 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D PU634_09315 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D PU634_12675 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D PU634_07150 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D PU634_03430 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D PU634_10950 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D PU634_13285 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D PU634_13475 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D PU634_12380 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PU634_08975 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PU634_09720 rluB; 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D PU634_07695 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D PU634_13040 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D PU634_10825 rluF; 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D PU634_12965 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D PU634_09945 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D PU634_13240 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D PU634_06540 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D PU634_02785 ycaO; 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D PU634_11875 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D PU634_06665 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D PU634_09975 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D PU634_07700 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D PU634_13885 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D PU634_05375 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D PU634_03530 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D PU634_10805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PU634_01450 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D PU634_12540 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PU634_10915 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D PU634_12470 hflX; GTPase HflX K03665 hflX; GTPase D PU634_00780 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PU634_16725 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PU634_10005 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D PU634_10020 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D PU634_00640 ybcJ; ribosome-associated protein YbcJ K14761 rlbA; ribosome-associated protein D PU634_11420 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D PU634_11380 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D PU634_10060 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D PU634_13865 yjgA; ribosome biogenesis factor YjgA K09889 yjgA; ribosome-associated protein D PU634_07165 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor D PU634_13835 hpf; ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor D PU634_03325 raiA; ribosome-associated translation inhibitor RaiA K05809 raiA; ribosome-associated inhibitor A D PU634_11325 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D PU634_07680 yceD; 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ope03016] D PU634_06740 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D PU634_01240 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D PU634_12225 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PU634_10095 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PU634_13165 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PU634_11400 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PU634_07915 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PU634_06255 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PU634_14650 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PU634_01510 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PU634_09685 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PU634_01895 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PU634_04305 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PU634_05815 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PU634_07320 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PU634_03620 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PU634_04250 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PU634_13550 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PU634_10930 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PU634_07300 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PU634_07295 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PU634_14145 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PU634_02055 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PU634_16315 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D PU634_08525 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PU634_01525 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D PU634_03870 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D PU634_09015 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D PU634_10000 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D PU634_01805 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D PU634_11000 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PU634_00780 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PU634_12480 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PU634_15635 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D PU634_15835 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PU634_07950 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D PU634_16995 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PU634_02135 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PU634_08840 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PU634_15620 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D PU634_06600 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D PU634_16765 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D PU634_15365 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D PU634_07440 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D PU634_14195 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D PU634_02655 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D PU634_15545 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PU634_15550 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PU634_14210 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D PU634_17045 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D PU634_16480 YbaK/EbsC family protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D PU634_05355 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D PU634_08325 YbaK/EbsC family protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D PU634_10730 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D PU634_01965 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D PU634_11880 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D PU634_05955 dusC; tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D PU634_11370 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D PU634_09695 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D PU634_09700 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D PU634_06925 methyltransferase domain-containing protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D PU634_09970 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D PU634_14620 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D PU634_13235 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PU634_11010 trmJ; tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D PU634_14695 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D PU634_01455 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D PU634_03500 truC; tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D PU634_12380 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PU634_08975 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PU634_10210 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PU634_07250 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D PU634_11145 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PU634_15525 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PU634_00915 tusB; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D PU634_00910 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D PU634_00905 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D PU634_08995 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D PU634_10990 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D PU634_13360 folate-binding Fe/S cluster repair protein K06980 ygfZ; tRNA-modifying protein YgfZ D PU634_04135 miaE; tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D PU634_09040 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D PU634_11055 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D PU634_09230 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PU634_09225 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PU634_09220 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PU634_03460 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D PU634_12505 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D PU634_07955 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D PU634_11050 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D PU634_11650 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PU634_10105 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D PU634_03020 GNAT family N-acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D PU634_07450 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D PU634_01220 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D PU634_12495 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D PU634_00120 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D PU634_13105 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D PU634_09990 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ope03012] D PU634_09105 stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1 D PU634_10010 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D PU634_07315 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D PU634_12665 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D PU634_10185 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D PU634_14345 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PU634_00935 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PU634_11685 fusA; elongation factor G K02355 fusA; elongation factor G D PU634_00930 fusA; elongation factor G K02355 fusA; elongation factor G D PU634_11290 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D PU634_10175 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D PU634_11285 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D PU634_11320 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D PU634_03565 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D PU634_12575 efp; elongation factor P K02356 efp; elongation factor P D PU634_12560 epmA; elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D PU634_12580 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D PU634_06675 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D PU634_01505 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D PU634_12880 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D PU634_01635 arfB; alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:ope03110] D PU634_03560 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D PU634_13030 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D PU634_05600 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D PU634_14665 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D PU634_08860 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D PU634_10080 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PU634_10980 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D PU634_06075 yegD; molecular chaperone K04046 yegD; hypothetical chaperone protein D PU634_12600 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PU634_10075 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D PU634_12395 djlA; co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein D PU634_10985 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D PU634_16980 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D PU634_10085 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D PU634_15565 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D PU634_15570 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D PU634_16985 hslR; ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D PU634_12605 co-chaperone GroES K04078 groES; chaperonin GroES D PU634_10050 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PU634_15860 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PU634_15000 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D PU634_00595 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D PU634_11805 molecular chaperone TorD family protein K03533 torD; TorA specific chaperone D PU634_05750 torD; molecular chaperone TorD K03533 torD; TorA specific chaperone D PU634_11630 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D PU634_04275 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D PU634_05615 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D PU634_12630 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D PU634_09440 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D PU634_13155 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D PU634_12650 slyD; peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D PU634_16470 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D PU634_06035 ppiC; peptidylprolyl isomerase PpiC K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D PU634_12405 surA; peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D PU634_00085 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D PU634_00615 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D PU634_11130 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin D PU634_10870 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1 D PU634_06550 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D PU634_15995 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D PU634_07405 dsbB; disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D PU634_03285 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:ope04131] D PU634_10960 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PU634_09110 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D PU634_00540 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PU634_09545 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PU634_09555 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PU634_06530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PU634_08860 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:ope03051] D PU634_08860 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:ope03032] D PU634_03365 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PU634_04870 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PU634_02445 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D PU634_10565 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PU634_05610 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PU634_07290 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D PU634_08930 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D PU634_15595 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PU634_01945 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PU634_09835 DnaA/Hda family protein K02315 dnaC; DNA replication protein DnaC D PU634_01205 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PU634_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PU634_10115 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PU634_15590 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PU634_13545 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PU634_11410 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PU634_07625 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PU634_11835 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_03370 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_03405 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_05970 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PU634_10120 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PU634_16145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PU634_03060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PU634_07075 DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein D PU634_02030 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PU634_06295 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D PU634_11170 hda; DnaA inactivator Hda K10763 hda; DnaA-homolog protein D PU634_06180 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PU634_15580 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PU634_01375 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PU634_01370 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PU634_06370 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PU634_14435 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ope03036] D PU634_04870 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PU634_13310 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PU634_08905 H-NS family nucleoid-associated regulatory protein K03746 hns; DNA-binding protein H-NS D PU634_02445 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D PU634_10565 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PU634_05610 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PU634_07290 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D PU634_08930 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D PU634_15595 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PU634_13705 SIS domain-containing protein K12961 diaA; DnaA initiator-associating protein D PU634_11885 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PU634_12475 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PU634_13440 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PU634_14510 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PU634_16910 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PU634_03385 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PU634_03595 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PU634_02160 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PU634_11105 yejK; nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein D PU634_06940 mukB; chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB D PU634_06935 mukE; chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE D PU634_06930 mukF; chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF D PU634_13615 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D PU634_01790 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D PU634_15065 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D PU634_13665 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PU634_03605 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D PU634_13670 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D PU634_13620 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D PU634_13640 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D PU634_15060 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D PU634_13610 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PU634_15155 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PU634_03055 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D PU634_09895 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D PU634_14675 cell division protein ZapB K09892 zapB; cell division protein ZapB D PU634_07125 cell division protein ZapC K18657 zapC; cell division protein ZapC D PU634_01390 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD D PU634_13755 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D PU634_02385 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D PU634_12230 LysM-like peptidoglycan-binding domain-containing protein K07269 ytfB; cell division protein YtfB D PU634_12490 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PU634_16400 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_02830 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_06790 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_07425 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D PU634_07430 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D PU634_07435 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D PU634_14910 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D PU634_06295 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D PU634_13905 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D PU634_13900 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D PU634_13895 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D PU634_11435 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D PU634_15845 ParA family protein K03496 parA; chromosome partitioning protein D PU634_03235 ParA family protein K03496 parA; chromosome partitioning protein D PU634_15850 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PU634_01375 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PU634_01370 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PU634_15835 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PU634_15840 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PU634_16095 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D PU634_01470 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D PU634_07910 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D PU634_16220 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:ope03400] D PU634_13980 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D PU634_09525 phrB; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D PU634_04005 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PU634_13395 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D PU634_06870 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PU634_01380 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PU634_17015 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PU634_14905 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PU634_15540 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D PU634_14880 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PU634_02820 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PU634_01475 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PU634_03060 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PU634_16145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PU634_13930 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D PU634_09070 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D PU634_05625 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D PU634_16105 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PU634_14305 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PU634_14300 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PU634_17215 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PU634_16730 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PU634_08435 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PU634_01835 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D PU634_12485 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D PU634_13220 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D PU634_06000 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D PU634_08290 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PU634_11665 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PU634_10115 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PU634_15590 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PU634_13545 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PU634_11410 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PU634_07625 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PU634_11835 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_03370 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_03405 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PU634_05970 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PU634_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PU634_02030 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PU634_06125 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D PU634_06120 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D PU634_06130 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D PU634_01885 recA; recombinase RecA K03553 recA; recombination protein RecA D PU634_09665 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PU634_09660 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PU634_09670 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PU634_14640 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D PU634_09830 DnaT-like ssDNA-binding domain-containing protein K02317 dnaT; DNA replication protein DnaT D PU634_00170 sbcC; exonuclease subunit SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D PU634_00165 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D PU634_12840 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D PU634_15585 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D PU634_16370 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PU634_13300 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D PU634_05980 recR; recombination mediator RecR K06187 recR; recombination protein RecR D PU634_03865 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D PU634_10630 Holliday junction resolvase RecU K03700 recU; recombination protein U D PU634_10600 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D PU634_10765 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D PU634_04940 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D PU634_08635 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1 D PU634_10860 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD D PU634_02105 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D PU634_06180 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PU634_15580 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PU634_06370 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PU634_02445 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D PU634_10565 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PU634_05610 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PU634_11885 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PU634_07290 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D PU634_08930 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D PU634_16115 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PU634_08905 H-NS family nucleoid-associated regulatory protein K03746 hns; DNA-binding protein H-NS D PU634_11565 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D PU634_02400 umuC; translesion error-prone DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D PU634_02395 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D PU634_14755 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D PU634_05530 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D PU634_01890 regulatory protein RecX K03565 recX; regulatory protein D PU634_00140 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D PU634_02165 UvrD-helicase domain-containing protein K03658 helD; DNA helicase IV [EC:5.6.2.4] D PU634_05935 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D PU634_07455 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D PU634_06165 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PU634_06160 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:ope03029] D PU634_13730 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D PU634_10010 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D PU634_07315 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D PU634_10185 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D PU634_14345 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PU634_00935 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PU634_11685 fusA; elongation factor G K02355 fusA; elongation factor G D PU634_00930 fusA; elongation factor G K02355 fusA; elongation factor G D PU634_13305 era; GTPase Era K03595 era; GTPase D PU634_14145 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PU634_11400 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PU634_09685 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PU634_14650 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PU634_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PU634_10150 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D PU634_10080 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PU634_10085 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D PU634_12600 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PU634_12605 co-chaperone GroES K04078 groES; chaperonin GroES D PU634_10075 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D PU634_11000 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PU634_10985 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D PU634_06550 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D PU634_07910 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D PU634_14710 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PU634_16810 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PU634_14740 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D PU634_14715 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PU634_15630 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PU634_14725 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D PU634_14705 SCO family protein K07152 SCO1; protein SCO1 D PU634_04045 SCO family protein K07152 SCO1; protein SCO1 D PU634_08860 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ope02000] D PU634_08395 msbA; lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D PU634_15230 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D PU634_06135 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D PU634_02355 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PU634_03950 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PU634_07160 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D PU634_15445 cysP; thiosulfate ABC transporter substrate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D PU634_15450 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D PU634_15455 cysW; sulfate/thiosulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D PU634_15460 cysA; sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D PU634_09930 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D PU634_09925 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D PU634_09920 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PU634_06590 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D PU634_01305 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PU634_01650 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PU634_01655 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PU634_01660 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PU634_00855 thiB; thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D PU634_00850 thiP; thiamine/thiamine pyrophosphate ABC transporter permease K02063 thiP; thiamine transport system permease protein D PU634_00845 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D PU634_14005 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D PU634_07280 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D PU634_07275 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein D PU634_07270 potB; spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein D PU634_07265 potA; spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D PU634_09165 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D PU634_09150 potI; putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein D PU634_09155 potH; putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein D PU634_09160 potG; putrescine ABC transporter ATP-binding subunit PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D PU634_02320 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D PU634_02305 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D PU634_02310 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D PU634_02300 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D PU634_12130 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D PU634_00390 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D PU634_00375 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D PU634_00385 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D PU634_00380 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D PU634_07470 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D PU634_04115 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D PU634_04120 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D PU634_04125 rbsA; ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PU634_02660 BMP family protein K07335 bmpA; basic membrane protein A and related proteins D PU634_13790 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PU634_13950 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PU634_13795 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PU634_13960 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PU634_13800 mlaF; phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PU634_13955 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PU634_13945 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component D PU634_13785 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D PU634_13780 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D PU634_10745 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D PU634_10710 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D PU634_10705 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D PU634_10700 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PU634_12910 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D PU634_00655 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D PU634_00660 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D PU634_12900 ABC transporter permease K02042 phnE; phosphonate transport system permease protein D PU634_12905 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D PU634_00650 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D PU634_01680 transporter substrate-binding domain-containing protein K09997 artI; arginine transport system substrate-binding protein D PU634_01690 artM; arginine ABC transporter permease ArtM K09998 artM; arginine transport system permease protein D PU634_01685 artQ; arginine ABC transporter permease ArtQ K09999 artQ; arginine transport system permease protein D PU634_01675 ATP-binding cassette domain-containing protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D PU634_09265 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D PU634_01500 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D PU634_01495 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D PU634_01490 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D PU634_01485 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D PU634_02805 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D PU634_08315 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D PU634_02815 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein D PU634_02810 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D PU634_02800 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D PU634_14805 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D PU634_14800 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D PU634_14795 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D PU634_14790 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D PU634_14785 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D PU634_14095 metQ; methionine ABC transporter substrate-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D PU634_09215 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D PU634_14090 ABC transporter permease K02072 metI; D-methionine transport system permease protein D PU634_14085 metN; methionine ABC transporter ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D PU634_15600 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein D PU634_15605 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein D PU634_15610 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein D PU634_04745 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PU634_05565 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PU634_05570 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D PU634_05575 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D PU634_05580 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D PU634_05585 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D PU634_04160 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D PU634_04155 ABC transporter permease subunit K19227 sapB; cationic peptide transport system permease protein D PU634_04150 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein D PU634_04145 ATP-binding cassette domain-containing protein K19229 sapD; cationic peptide transport system ATP-binding protein D PU634_04140 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein D PU634_11705 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PU634_15265 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PU634_11700 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PU634_15260 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D PU634_11695 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PU634_15255 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PU634_11710 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PU634_14065 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PU634_15250 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D PU634_14060 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D PU634_14070 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D PU634_14080 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein D PU634_14075 ABC transporter permease subunit K13895 yejE; microcin C transport system permease protein D PU634_04355 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PU634_04360 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D PU634_04365 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PU634_14135 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D PU634_05330 btuC; vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein D PU634_05335 ATP-binding cassette domain-containing protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D PU634_12815 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D PU634_00275 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D PU634_12805 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein D PU634_00285 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D PU634_12810 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PU634_00280 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PU634_15660 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D PU634_15650 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein D PU634_15645 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D PU634_15655 manganese/iron ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein D PU634_08715 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D PU634_08725 chain-length determining protein K10107 kpsE; capsular polysaccharide transport system permease protein D PU634_08720 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D PU634_13535 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D PU634_13530 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D PU634_13825 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D PU634_08415 lolE; lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D PU634_08425 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D PU634_08420 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D PU634_03270 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D PU634_03265 heme ABC transporter permease K02195 ccmC; heme exporter protein C D PU634_03260 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D PU634_03255 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D PU634_15060 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D PU634_15065 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D PU634_14240 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PU634_02150 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PU634_14245 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PU634_02145 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PU634_12185 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D PU634_06725 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PU634_06825 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PU634_12190 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PU634_12995 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PU634_06720 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PU634_06830 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PU634_05480 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PU634_09320 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PU634_08095 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D PU634_09310 Na/Pi symporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D PU634_07350 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D PU634_14700 dinF; MATE family efflux transporter DinF K26937 dinF; MATE family, multidrug efflux pump D PU634_12610 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D PU634_15435 aromatic acid/H+ symport family MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein D PU634_04575 cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D PU634_09390 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D PU634_02725 3-phenylpropionate MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D PU634_07750 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D PU634_11635 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D PU634_13430 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D PU634_07070 Bcr/CflA family multidrug efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D PU634_10785 MFS transporter K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D PU634_07800 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D PU634_07845 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D PU634_06845 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D PU634_06050 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein D PU634_13210 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D PU634_13850 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D PU634_08965 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D PU634_03030 crr; PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PU634_09085 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PU634_08955 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PU634_13840 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D PU634_16540 ion transporter K10716 kch; voltage-gated potassium channel D PU634_04235 ion transporter K10716 kch; voltage-gated potassium channel D PU634_01645 ammonium transporter K03320 amt; ammonium transporter, Amt family D PU634_00155 glutathione binding-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PU634_00180 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PU634_13720 sspA; stringent starvation protein SspA K03599 sspA; stringent starvation protein A D PU634_08985 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease D PU634_12550 mscM; miniconductance mechanosensitive channel MscM K22051 mscM; miniconductance mechanosensitive channel D PU634_14915 mscS; small-conductance mechanosensitive channel MscS K03442 mscS; small conductance mechanosensitive channel D PU634_07030 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D PU634_00185 mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel D PU634_13855 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D PU634_16035 urea transporter K08717 utp; urea transporter D PU634_11660 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D PU634_03225 flagellar motor protein K02556 motA; chemotaxis protein MotA D PU634_11655 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PU634_03230 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PU634_13270 flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX D PU634_08140 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D PU634_02675 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D PU634_09650 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D PU634_09645 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D PU634_09050 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D PU634_15245 zntB; zinc transporter ZntB K16074 zntB; zinc transporter D PU634_00030 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D PU634_13260 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D PU634_15940 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D PU634_09460 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D PU634_08890 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D PU634_01610 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D PU634_12725 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein D PU634_14600 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D PU634_00295 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D PU634_01345 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D PU634_02360 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D PU634_03960 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D PU634_07810 TolC family protein K18300 oprN; outer membrane protein, multidrug efflux system D PU634_11990 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D PU634_10150 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D PU634_10920 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D PU634_05525 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D PU634_13045 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D PU634_03855 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D PU634_08555 autotransporter assembly complex protein TamA K07278 tamA; translocation and assembly module TamA D PU634_08550 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB D PU634_13820 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D PU634_13815 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D PU634_12400 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein D PU634_11405 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein D PU634_11385 corC; CNNM family magnesium/cobalt transport protein CorC K06189 corC; hemolysin (HlyC) family protein D PU634_05995 CidA/LrgA family protein K06518 cidA; holin-like protein D PU634_02155 yjeH; L-methionine/branched-chain amino acid transporter K16263 yjeH; amino acid efflux transporter D PU634_14685 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D PU634_07460 divalent cation transporter K07238 TC.ZIP; zinc transporter, ZIP family D PU634_07815 multidrug efflux RND transporter permease subunit K18299 mexF; multidrug efflux pump D PU634_16395 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PU634_06795 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PU634_09340 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump D PU634_02710 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump D PU634_07870 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family D PU634_16110 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D PU634_05680 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D PU634_02590 SLC13 family permease K07084 yuiF; putative amino acid transporter D PU634_06570 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter D PU634_15705 L-lactate permease K03303 lutP; lactate permease D PU634_04295 BCCT family transporter K05020 opuD; glycine betaine transporter D PU634_04310 BCCT family transporter K05020 opuD; glycine betaine transporter D PU634_01845 BCCT family transporter K05020 opuD; glycine betaine transporter D PU634_04475 BCCT family transporter K05020 opuD; glycine betaine transporter D PU634_12280 BCCT family transporter K05020 opuD; glycine betaine transporter D PU634_12285 BCCT family transporter K05020 opuD; glycine betaine transporter D PU634_12325 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D PU634_04495 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D PU634_04590 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D PU634_09800 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D PU634_11870 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter D PU634_02110 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D PU634_04320 sodium:solute symporter family protein K11928 putP; sodium/proline symporter D PU634_08885 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D PU634_08070 cation acetate symporter K14393 actP; cation/acetate symporter D PU634_00400 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D PU634_15160 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D PU634_13195 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D PU634_12060 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D PU634_04735 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D PU634_08900 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump D PU634_09290 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D PU634_13995 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter D PU634_15505 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D PU634_00735 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D PU634_00740 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D PU634_11180 uracil-xanthine permease family protein K02824 uraA; uracil permease D PU634_10955 nucleobase:cation symporter-2 family protein K24206 uacT; uric acid transporter D PU634_14030 nucleobase:cation symporter-2 family protein K16345 xanP; xanthine permease XanP D PU634_01620 nucleobase:cation symporter-2 family protein K16345 xanP; xanthine permease XanP D PU634_05810 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D PU634_01090 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D PU634_15440 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D PU634_02695 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D PU634_13965 chloride channel protein K03281 clcA; chloride channel protein, CIC family D PU634_02540 chrA; chromate efflux transporter K07240 chrA; chromate transporter D PU634_03585 dauA; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family D PU634_08170 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D PU634_01065 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D PU634_00425 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D PU634_05465 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D PU634_04080 TRAP transporter large permease K21393 yiaN; TRAP-type transport system large permease protein D PU634_16945 TRAP transporter small permease subunit K21394 yiaM; TRAP-type transport system small permease protein D PU634_05425 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein D PU634_16685 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein D PU634_04090 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein D PU634_04685 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein D PU634_05420 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D PU634_00435 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein D PU634_00540 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D PU634_07760 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D PU634_16155 putative monovalent cation/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D PU634_16160 Na+/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D PU634_16165 Na+/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D PU634_16170 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D PU634_16175 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D PU634_16180 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D PU634_16185 mnhG; monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D PU634_13175 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D PU634_14550 AEC family transporter K13936 mdcF; malonate transporter and related proteins D PU634_15530 AEC family transporter K13936 mdcF; malonate transporter and related proteins D PU634_08080 AEC family transporter K24180 mleP; malate permease and related proteins D PU634_11680 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D PU634_14505 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D PU634_11500 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein D PU634_12055 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein D PU634_05690 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein D PU634_16780 LysE family translocator K05835 rhtC; threonine efflux protein D PU634_12920 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D PU634_02650 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D PU634_04655 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D PU634_04700 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D PU634_12915 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D PU634_02645 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D PU634_04660 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D PU634_04705 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D PU634_14430 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D PU634_01330 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D PU634_14425 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D PU634_01325 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D PU634_14420 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D PU634_01320 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D PU634_11140 AI-2E family transporter K03548 perM; putative permease D PU634_16135 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter D PU634_13640 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D PU634_09110 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D PU634_16635 nickel/cobalt efflux protein RcnA K08970 rcnA; nickel/cobalt transporter (NicO) family protein D PU634_03740 nickel/cobalt efflux protein RcnA K08970 rcnA; nickel/cobalt transporter (NicO) family protein D PU634_02680 energy transducer TonB K03832 tonB; periplasmic protein TonB D PU634_09630 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D PU634_09640 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D PU634_09635 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D PU634_01935 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PU634_01930 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D PU634_01925 OadG family transporter subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D PU634_11510 protein-disulfide reductase DsbD family protein K08344 scsB; suppressor for copper-sensitivity B D PU634_05755 torA; trimethylamine-N-oxide reductase TorA K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D PU634_05760 torC; pentaheme c-type cytochrome TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D PU634_11805 molecular chaperone TorD family protein K03533 torD; TorA specific chaperone D PU634_05750 torD; molecular chaperone TorD K03533 torD; TorA specific chaperone D PU634_02350 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D PU634_03955 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D PU634_07820 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D PU634_16400 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_02830 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_06790 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_09345 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system D PU634_02570 entericidin A/B family lipoprotein K16348 ecnB; entericidin B D PU634_03280 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D PU634_12935 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D PU634_01095 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D PU634_00440 MipA/OmpV family protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:ope02044] D PU634_01345 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein D PU634_02355 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PU634_03950 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PU634_02350 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D PU634_03955 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D PU634_02360 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D PU634_03960 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D PU634_15820 AAA family ATPase K02450 gspA; general secretion pathway protein A D PU634_15790 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D PU634_15740 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D PU634_15745 type II secretion system F family protein K02455 gspF; general secretion pathway protein F D PU634_15750 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D PU634_15755 GspH/FimT family protein K02457 gspH; general secretion pathway protein H D PU634_15760 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I D PU634_15765 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D PU634_15770 type II secretion system protein GspK K02460 gspK; general secretion pathway protein K D PU634_15775 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D PU634_15780 gspM; type II secretion system protein GspM K02462 gspM; general secretion pathway protein M D PU634_01535 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D PU634_01545 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D PU634_01540 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D PU634_13145 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D PU634_10945 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D PU634_01990 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D PU634_01995 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D PU634_02000 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D PU634_02005 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D PU634_02010 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D PU634_01430 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D PU634_01435 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D PU634_13140 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT D PU634_05835 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D PU634_05845 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D PU634_05850 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D PU634_05875 cellulose synthase operon protein YhjQ/BcsQ K02282 cpaE; pilus assembly protein CpaE D PU634_05880 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PU634_05885 type II secretion system F family protein K12510 tadB; tight adherence protein B D PU634_05890 type II secretion system F family protein K12511 tadC; tight adherence protein C D PU634_05830 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA D PU634_08025 type II secretion system protein K10924 mshA; MSHA pilin protein MshA D PU634_08015 prepilin-type N-terminal cleavage/methylation domain-containing protein K10927 mshD; MSHA pilin protein MshD D PU634_08035 GspE/PulE family protein K12276 mshE; MSHA biogenesis protein MshE D PU634_08030 type II secretion system F family protein K12278 mshG; MSHA biogenesis protein MshG D PU634_08065 MSHA biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI D PU634_08055 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ D PU634_08050 MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK D PU634_08045 mshL; pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL D PU634_08040 tetratricopeptide repeat protein K12284 mshN; MSHA biogenesis protein MshN D PU634_08010 type II secretion system protein K12285 mshO; MSHA biogenesis protein MshO D PU634_13135 prepilin-type N-terminal cleavage/methylation domain-containing protein K02680 ppdB; prepilin peptidase dependent protein B D PU634_01415 YggT family protein K02221 yggT; YggT family protein D PU634_09815 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D PU634_08400 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D PU634_03185 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PU634_03180 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PU634_03115 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D PU634_03125 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D PU634_03130 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PU634_03155 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PU634_03160 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D PU634_03165 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D PU634_03170 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PU634_03175 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D PU634_13600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PU634_15000 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D PU634_11040 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PU634_14335 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PU634_11035 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D PU634_10035 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PU634_17190 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PU634_13250 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PU634_15070 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PU634_11045 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PU634_15630 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PU634_00050 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D PU634_00060 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:ope02042] D PU634_15670 TDT family transporter K11041 eta; exfoliative toxin A/B D PU634_13260 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D PU634_15940 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:ope02022] D PU634_10750 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PU634_10755 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D PU634_12925 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_03730 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_06770 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_12930 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D PU634_03680 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D PU634_06745 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D PU634_14110 arcB; aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D PU634_10660 arcA; two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D PU634_01310 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D PU634_01315 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD D PU634_14490 response regulator K02483 K02483; two-component system, OmpR family, response regulator D PU634_05490 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D PU634_13290 barA; two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D PU634_05620 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D PU634_01175 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D PU634_01170 btsR; two-component system response regulator BtsR K02477 K02477; two-component system, LytTR family, response regulator D PU634_16260 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PU634_16255 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D PU634_02205 sigma-54 dependent transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D PU634_14465 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PU634_14455 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D PU634_02755 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D PU634_00520 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D PU634_00515 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D PU634_02750 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D PU634_03215 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PU634_03205 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PU634_03220 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PU634_02930 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D PU634_05360 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D PU634_05365 response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR D PU634_03100 HAMP domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D PU634_03105 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D PU634_08090 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:ope02035] D PU634_03215 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PU634_03240 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PU634_03245 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PU634_02935 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PU634_03220 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PU634_03205 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PU634_03210 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D PU634_02930 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D PU634_11550 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_13555 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_13590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_02195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_04030 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_07000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_07060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_07965 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_08320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_08450 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_00715 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_01120 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_01480 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_01595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PU634_04325 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D PU634_06385 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D PU634_00450 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D PU634_03125 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D PU634_03130 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PU634_03135 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D PU634_03160 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D PU634_03165 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D PU634_03170 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PU634_03175 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D PU634_03185 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PU634_03180 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PU634_03120 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D PU634_03150 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D PU634_03155 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PU634_03115 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D PU634_02980 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D PU634_02925 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D PU634_02975 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D PU634_14770 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D PU634_03145 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D PU634_03110 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D PU634_02940 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D PU634_02945 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D PU634_02950 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D PU634_02965 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D PU634_02970 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D PU634_02985 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D PU634_02960 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D PU634_02990 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D PU634_02995 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D PU634_02915 flgN; flagellar export chaperone FlgN K02399 flgN; flagellar biosynthesis protein FlgN D PU634_02910 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP D PU634_13270 flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX D PU634_08140 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D PU634_03080 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D PU634_03090 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D PU634_03200 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D PU634_11660 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D PU634_03225 flagellar motor protein K02556 motA; chemotaxis protein MotA D PU634_11655 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PU634_03230 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PU634_03095 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D PU634_03100 HAMP domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D PU634_03105 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D PU634_02920 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D PU634_03075 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D PU634_03190 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D PU634_03195 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D PU634_01430 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D PU634_01435 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D PU634_01545 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D PU634_01540 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D PU634_01535 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D PU634_10945 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D PU634_02010 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D PU634_02005 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D PU634_02000 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D PU634_01995 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D PU634_01990 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D PU634_13145 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D PU634_05830 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA D PU634_05835 A24 family peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D PU634_05845 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D PU634_05850 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D PU634_05875 cellulose synthase operon protein YhjQ/BcsQ K02282 cpaE; pilus assembly protein CpaE D PU634_05880 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ope04812] D PU634_13905 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D PU634_13610 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PU634_15155 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PU634_13615 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D PU634_07425 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D PU634_07430 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D PU634_07435 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D PU634_15845 ParA family protein K03496 parA; chromosome partitioning protein D PU634_03235 ParA family protein K03496 parA; chromosome partitioning protein D PU634_15850 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ope04147] D PU634_08860 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D PU634_01785 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PU634_09545 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PU634_09555 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PU634_10670 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PU634_06530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PU634_11630 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D PU634_01850 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PU634_04505 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PU634_06575 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D PU634_12600 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PU634_10080 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PU634_03940 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PU634_08285 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PU634_14345 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PU634_00935 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PU634_08525 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PU634_05480 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PU634_09320 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PU634_06615 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PU634_09310 Na/Pi symporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter) D PU634_01725 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_06240 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PU634_08680 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PU634_05965 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PU634_17080 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PU634_17075 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PU634_05445 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D PU634_08375 fbp; class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PU634_07985 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PU634_16285 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_09180 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_00585 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PU634_00070 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PU634_02185 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D PU634_02265 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D PU634_03995 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PU634_02465 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PU634_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PU634_01770 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit D PU634_06915 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PU634_07035 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:ope02048] D PU634_08635 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1 D PU634_08630 cas3f; type I-F CRISPR-associated helicase Cas3f K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D PU634_08625 csy1; type I-F CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1 D PU634_08620 csy2; type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2 D PU634_08615 csy3; type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3 D PU634_08610 cas6f; type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] D PU634_16610 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D PU634_03785 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D PU634_16590 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D PU634_03780 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D PU634_16585 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D PU634_03775 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D PU634_02030 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PU634_04870 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PU634_16600 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D PU634_16605 McrC family protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D PU634_04180 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D PU634_04175 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B D PU634_13610 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PU634_15155 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PU634_13905 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D PU634_01375 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PU634_01370 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PU634_12225 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PU634_13350 hypothetical protein K19168 cptA; toxin CptA D PU634_13355 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D PU634_11000 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PU634_11905 dndB; DNA sulfur modification protein DndB K19169 dndB; DNA sulfur modification protein DndB D PU634_11910 dndC; DNA phosphorothioation system sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC D PU634_11915 dndD; DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD D PU634_11920 dndE; DNA sulfur modification protein DndE K19172 dndE; DNA sulfur modification protein DndE D PU634_11940 dptF; DNA phosphorothioation-dependent restriction protein DptF K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF D PU634_11935 dptG; DNA phosphorothioation-dependent restriction protein DptG K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG D PU634_11930 dptH; DNA phosphorothioation-dependent restriction protein DptH K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:ope01504] D PU634_08900 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump D PU634_12925 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_03730 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_06770 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D PU634_12930 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D PU634_03680 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D PU634_06745 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D PU634_12150 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PU634_04075 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PU634_16400 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_02830 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_06790 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PU634_16395 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PU634_06795 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PU634_07820 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D PU634_07815 multidrug efflux RND transporter permease subunit K18299 mexF; multidrug efflux pump D PU634_07810 TolC family protein K18300 oprN; outer membrane protein, multidrug efflux system D PU634_15980 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D PU634_01345 tolC; outer membrane channel protein TolC K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ope00537] D PU634_01850 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PU634_04505 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ope03100] D PU634_12205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PU634_12215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PU634_04225 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PU634_16410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PU634_06215 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PU634_03380 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PU634_12345 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PU634_13000 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PU634_14565 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PU634_06405 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PU634_10030 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PU634_07130 tRNA-Met K14230 tRNA-Met; tRNA Met D PU634_13405 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PU634_13410 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PU634_13415 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PU634_06605 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PU634_08230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PU634_07360 tRNA-Val K14237 tRNA-Val; tRNA Val D PU634_09570 tRNA-Val K14237 tRNA-Val; tRNA Val D PU634_09580 tRNA-Val K14237 tRNA-Val; tRNA Val D PU634_00835 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PU634_00020 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D PU634_16350 hisD; histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] D PU634_09275 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D PU634_12275 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D PU634_07755 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D PU634_09405 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D PU634_00410 NAD/NADP octopine/nopaline dehydrogenase family protein K04940 odh; opine dehydrogenase [EC:1.5.1.28] D PU634_01760 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D PU634_00315 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5] D PU634_13065 NADP-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D PU634_07380 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D PU634_11100 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D PU634_00220 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D PU634_05320 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D PU634_08565 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D PU634_05315 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D PU634_16750 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D PU634_07860 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D PU634_03660 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D PU634_00610 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D PU634_14450 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D PU634_05515 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PU634_12175 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PU634_11095 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D PU634_01665 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D PU634_00330 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D PU634_00605 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D PU634_01615 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D PU634_02580 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D PU634_13075 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D PU634_11160 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D PU634_00310 ArsR family transcriptional regulator K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D PU634_09060 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D PU634_01815 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D PU634_09500 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D PU634_11390 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D PU634_09980 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D PU634_10760 N-acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D PU634_06810 GNAT family N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D PU634_10740 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D PU634_05705 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D PU634_13940 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D PU634_03575 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D PU634_03570 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D PU634_12885 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D PU634_13205 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D PU634_11575 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D PU634_09240 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D PU634_01290 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D PU634_05945 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D PU634_02715 GGDEF domain-containing protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D PU634_16125 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D PU634_11070 phosphotransferase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1] D PU634_10225 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D PU634_09295 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D PU634_09655 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D PU634_09730 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D PU634_06650 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D PU634_05395 endonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D PU634_12875 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PU634_07620 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PU634_00065 tatD; 3'-5' ssDNA/RNA exonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PU634_06290 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D PU634_11540 frsA; esterase FrsA K11750 frsA; esterase FrsA [EC:3.1.-.-] D PU634_13985 serine hydrolase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D PU634_00755 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D PU634_13875 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D PU634_14025 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D PU634_00900 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D PU634_01840 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D PU634_01270 CYTH domain-containing protein K18446 ygiF; triphosphatase [EC:3.6.1.25] D PU634_07685 Maf family protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D PU634_11250 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PU634_12500 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D PU634_01340 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D PU634_14260 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D PU634_09385 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D PU634_06885 rsxD; electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D PU634_06890 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D PU634_06895 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D PU634_11605 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D PU634_11600 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D PU634_11595 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D PU634_11590 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D PU634_11585 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D PU634_11580 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D PU634_07225 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D PU634_14515 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D PU634_14200 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D PU634_11060 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB D PU634_15710 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D PU634_15715 LutB/LldF family L-lactate oxidation iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D PU634_15720 lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D PU634_16960 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D PU634_10975 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D PU634_06155 yfaE; class I ribonucleotide reductase maintenance protein YfaE K11107 yfaE; ferredoxin D PU634_06880 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D PU634_06875 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D PU634_06900 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D PU634_15830 mioC; FMN-binding protein MioC K06205 mioC; MioC protein D PU634_01465 fldB; flavodoxin FldB K03840 fldB; flavodoxin II D PU634_10995 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D PU634_06440 chaperone NapD K02570 napD; periplasmic nitrate reductase NapD D PU634_06435 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF D PU634_05765 periplasmic nitrate reductase, NapE protein K02571 napE; periplasmic nitrate reductase NapE D PU634_06275 fldA; flavodoxin FldA K03839 fldA; flavodoxin I D PU634_06455 cytochrome c3 family protein K02569 napC; cytochrome c-type protein NapC D PU634_01765 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D PU634_03050 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein D PU634_14175 VOC family protein K08234 yaeR; glyoxylase I family protein D PU634_12565 VOC family protein K08234 yaeR; glyoxylase I family protein D PU634_01425 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D PU634_08925 lipopolysaccharide assembly protein LapA domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A D PU634_08920 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B C 99987 Cofactor metabolism D PU634_16045 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein D PU634_00045 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D PU634_00040 SCP2 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D PU634_00105 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D PU634_11015 SCP2 sterol-binding domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D PU634_08560 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others D PU634_03655 DoxX family protein K15977 K15977; putative oxidoreductase D PU634_06085 DoxX family protein K15977 K15977; putative oxidoreductase D PU634_00465 DoxX family protein K15977 K15977; putative oxidoreductase D PU634_11750 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase D PU634_15475 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D PU634_13425 cold-shock protein K03704 cspA; cold shock protein D PU634_03550 cspD; cold shock domain-containing protein CspD K03704 cspA; cold shock protein D PU634_09420 cold-shock protein K03704 cspA; cold shock protein D PU634_12830 rsd; sigma D regulator K07740 rsd; regulator of sigma D D PU634_01640 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D PU634_16865 Tex family protein K06959 tex; protein Tex C 99974 Translation D PU634_16815 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein D PU634_03930 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D PU634_00620 META domain-containing protein K03668 hslJ; heat shock protein HslJ D PU634_03555 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D PU634_05590 tig; trigger factor K03545 tig; trigger factor D PU634_14445 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D PU634_05790 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein D PU634_05795 urease accessory UreF family protein K03188 ureF; urease accessory protein D PU634_05800 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D PU634_05770 urease accessory protein UreD K03190 ureD; urease accessory protein D PU634_05805 HupE/UreJ family protein K03192 ureJ; urease accessory protein D PU634_03840 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D PU634_16005 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D PU634_08235 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D PU634_12705 OsmC family protein K07397 yhfA; putative redox protein D PU634_14990 nfuA; Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D PU634_06490 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein D PU634_00980 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D PU634_11265 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D PU634_06380 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D PU634_03440 xni; flap endonuclease Xni K01146 xni; protein Xni D PU634_14895 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D PU634_03795 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D PU634_00730 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D PU634_06040 DUF2813 domain-containing protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D PU634_13700 YraN family protein K07460 yraN; putative endonuclease D PU634_12625 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D PU634_00765 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D PU634_03615 replication-associated recombination protein A K07478 ycaJ; putative ATPase D PU634_00775 topoisomerase DNA-binding C4 zinc finger domain-containing protein K07479 yrdD; putative DNA topoisomerase D PU634_10800 IS3 family transposase K07497 K07497; putative transposase D PU634_11470 IS3 family transposase K07497 K07497; putative transposase D PU634_14295 IS3 family transposase K07497 K07497; putative transposase D PU634_16280 IS3 family transposase K07497 K07497; putative transposase D PU634_02035 IS3 family transposase K07497 K07497; putative transposase D PU634_05370 IS3 family transposase K07497 K07497; putative transposase D PU634_00805 IS3 family transposase K07497 K07497; putative transposase D PU634_01590 IS3 family transposase K07497 K07497; putative transposase D PU634_10655 site-specific integrase K14059 int; integrase D PU634_04850 site-specific integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D PU634_04170 pspA; phage shock protein PspA K03969 pspA; phage shock protein A D PU634_09285 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E D PU634_05975 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC D PU634_15040 DASH family cryptochrome K25656 cry; cryptochrome B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D PU634_02835 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D PU634_03395 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D PU634_06115 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D PU634_01135 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D PU634_01260 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D PU634_04335 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D PU634_11135 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D PU634_15105 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D PU634_02190 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D PU634_07710 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D PU634_08105 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D PU634_12145 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D PU634_03015 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D PU634_04020 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D PU634_01460 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D PU634_14945 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D PU634_14955 NCS1 family transporter K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D PU634_05745 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D PU634_04070 septation protein A K06190 ispZ; intracellular septation protein D PU634_00340 ytfE; iron-sulfur cluster repair protein YtfE K07322 ytfE; regulator of cell morphogenesis and NO signaling D PU634_07395 SpoVR family protein K06415 spoVR; stage V sporulation protein R D PU634_15015 envC; murein hydrolase activator EnvC K22719 envC; murein hydrolase activator C 99993 Cell motility D PU634_08520 penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator D PU634_03465 SecY-interacting protein Syd K15723 syd; SecY interacting protein Syd C 99995 Signaling proteins D PU634_07095 proQ; RNA chaperone ProQ K03607 proQ; ProP effector D PU634_16535 universal stress protein K06149 uspA; universal stress protein A D PU634_06635 universal stress protein K06149 uspA; universal stress protein A D PU634_07245 uspE; universal stress protein UspE K14055 uspE; universal stress protein E D PU634_00530 carbon starvation protein A K06200 cstA; carbon starvation protein D PU634_16290 typA; translational GTPase TypA K06207 typA; GTP-binding protein D PU634_02690 CBS domain-containing protein K07168 K07168; CBS domain-containing membrane protein D PU634_11375 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D PU634_00840 PhoH family protein K07175 phoH2; PhoH-like ATPase D PU634_07385 PrkA family serine protein kinase K07180 prkA; serine protein kinase D PU634_11830 putative nucleotidyltransferase substrate binding domain-containing protein K07182 K07182; CBS domain-containing protein D PU634_03400 putative nucleotidyltransferase substrate binding domain-containing protein K07182 K07182; CBS domain-containing protein D PU634_01255 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein D PU634_12855 hypothetical protein K07186 smp; membrane protein D PU634_11640 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D PU634_03610 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D PU634_11300 lolB; lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB D PU634_03300 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D PU634_06055 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB D PU634_10145 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D PU634_01825 LysM peptidoglycan-binding domain-containing protein K06194 nlpD; lipoprotein NlpD D PU634_11030 nlpI; lipoprotein NlpI K05803 nlpI; lipoprotein NlpI D PU634_08700 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein D PU634_08845 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein D PU634_14540 outer membrane beta-barrel protein K07275 ompW; outer membrane protein D PU634_11625 YajG family lipoprotein K07286 yajG; uncharacterized lipoprotein D PU634_07900 AsmA family protein K07289 asmA; AsmA protein D PU634_02140 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein D PU634_13565 glycine zipper 2TM domain-containing protein K04062 osmB; osmotically inducible lipoprotein OsmB D PU634_03275 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D PU634_03290 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D PU634_10940 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D PU634_10695 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D PU634_00945 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin D PU634_00690 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D PU634_12420 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D PU634_16070 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D PU634_17040 imelysin family protein K07231 K07231; putative iron-regulated protein D PU634_03690 copper resistance protein B K07233 pcoB; copper resistance protein B D PU634_06755 copper resistance protein B K07233 pcoB; copper resistance protein B D PU634_13025 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D PU634_06100 GlpM family protein K02442 glpM; membrane protein GlpM D PU634_03625 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D PU634_07050 pqiB; intermembrane transport protein PqiB K06192 pqiB; paraquat-inducible protein B D PU634_09305 osmY; molecular chaperone OsmY K04065 osmY; hyperosmotically inducible periplasmic protein D PU634_10100 patatin-like phospholipase family protein K07001 K07001; NTE family protein D PU634_06800 patatin-like phospholipase family protein K07001 K07001; NTE family protein D PU634_01600 patatin-like phospholipase family protein K07001 K07001; NTE family protein D PU634_14165 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D PU634_08575 metal-dependent hydrolase K07038 K07038; inner membrane protein D PU634_16305 virulence factor BrkB family protein K07058 K07058; membrane protein D PU634_08535 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D PU634_12615 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D PU634_00130 csdE; cysteine desulfurase sulfur acceptor subunit CsdE K02426 sufE; cysteine desulfuration protein SufE D PU634_10215 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D PU634_12645 SlyX family protein K03745 slyX; SlyX protein D PU634_00770 DUF494 family protein K03747 smg; Smg protein D PU634_09065 CreA family protein K05805 creA; CreA protein D PU634_05405 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein D PU634_09000 dedD; cell division protein DedD K03749 dedD; DedD protein D PU634_02025 SPOR domain-containing protein K03112 damX; DamX protein D PU634_07055 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D PU634_04190 TIGR01620 family protein K08990 ycjF; putative membrane protein D PU634_15080 DUF1145 domain-containing protein K08993 yhhL; putative membrane protein D PU634_09465 YchJ family metal-binding protein K09858 K09858; SEC-C motif domain protein D PU634_06805 cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein D PU634_08165 phosphate-starvation-inducible PsiE family protein K13256 psiE; protein PsiE D PU634_06985 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA C 99997 Function unknown D PU634_04570 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D PU634_04185 YcjX family protein K06918 K06918; uncharacterized protein D PU634_00600 CoA-binding protein K06929 K06929; uncharacterized protein D PU634_07020 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D PU634_09190 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D PU634_15020 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D PU634_04035 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D PU634_09510 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D PU634_05695 L-cystine transporter K06956 K06956; uncharacterized protein D PU634_09950 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D PU634_00200 C39 family peptidase K06992 K06992; uncharacterized protein D PU634_04790 cupin domain-containing protein K06995 K06995; uncharacterized protein D PU634_16820 VOC family protein K06996 K06996; uncharacterized protein D PU634_01365 esterase YqiA K07000 K07000; uncharacterized protein D PU634_11115 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein D PU634_03420 alpha/beta fold hydrolase K07020 K07020; uncharacterized protein D PU634_12655 YheV family putative zinc ribbon protein K07070 K07070; uncharacterized protein D PU634_12180 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein D PU634_02770 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D PU634_06340 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D PU634_00495 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D PU634_09370 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein D PU634_11315 TSUP family transporter K07090 K07090; uncharacterized protein D PU634_01875 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D PU634_05325 TSUP family transporter K07090 K07090; uncharacterized protein D PU634_06905 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D PU634_08135 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D PU634_04845 PhoX family phosphatase K07093 K07093; uncharacterized protein D PU634_05505 YeeE/YedE family protein K07112 K07112; uncharacterized protein D PU634_05510 hypothetical protein K07112 K07112; uncharacterized protein D PU634_01335 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D PU634_13695 penicillin-binding protein activator K07121 K07121; uncharacterized protein D PU634_14645 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein D PU634_15625 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D PU634_01210 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D PU634_01410 DUF167 family protein K09131 K09131; uncharacterized protein D PU634_11455 ybeD; DUF493 family protein YbeD K09158 K09158; uncharacterized protein D PU634_07410 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D PU634_09505 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D PU634_07570 DUF503 domain-containing protein K09764 K09764; uncharacterized protein D PU634_11490 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D PU634_04065 YciI family protein K09780 K09780; uncharacterized protein D PU634_07390 YeaH/YhbH family protein K09786 K09786; uncharacterized protein D PU634_05960 YbaN family protein K09790 K09790; uncharacterized protein D PU634_08385 Trm112 family protein K09791 K09791; uncharacterized protein D PU634_07235 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D PU634_01970 YdcH family protein K09794 K09794; uncharacterized protein D PU634_03850 RnfH family protein K09801 K09801; uncharacterized protein D PU634_03990 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D PU634_11570 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein D PU634_03515 S1-like domain-containing RNA-binding protein K00243 K00243; uncharacterized protein D PU634_07045 ABC-type transport auxiliary lipoprotein family protein K09857 K09857; uncharacterized protein D PU634_01440 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D PU634_01385 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D PU634_12790 YjaG family protein K09891 K09891; uncharacterized protein D PU634_16235 yihI; Der GTPase-activating protein YihI K09894 K09894; uncharacterized protein D PU634_09890 UPF0149 family protein K09895 K09895; uncharacterized protein D PU634_06005 DUF413 domain-containing protein K09897 K09897; uncharacterized protein D PU634_12695 YheU family protein K09898 K09898; uncharacterized protein D PU634_12170 yfbV; terminus macrodomain insulation protein YfbV K09899 K09899; uncharacterized protein D PU634_07420 YcgL domain-containing protein K09902 K09902; uncharacterized protein D PU634_11110 YejL family protein K09904 K09904; uncharacterized protein D PU634_06850 VOC family protein K09907 K09907; uncharacterized protein D PU634_05930 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein D PU634_01630 YacL family protein K09910 K09910; uncharacterized protein D PU634_04040 DUF480 domain-containing protein K09915 K09915; uncharacterized protein D PU634_09540 DUF1315 family protein K09916 K09916; uncharacterized protein D PU634_07080 YebG family protein K09918 K09918; uncharacterized protein D PU634_01355 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein D PU634_16090 DUF484 family protein K09921 K09921; uncharacterized protein D PU634_07220 FixH family protein K09926 K09926; uncharacterized protein D PU634_08405 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D PU634_08410 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D PU634_00475 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D PU634_08195 TIGR04282 family arsenosugar biosynthesis glycosyltransferase K09931 K09931; uncharacterized protein D PU634_11175 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein D PU634_00250 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein D PU634_17025 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein D PU634_09475 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein D PU634_06820 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein D PU634_08910 DUF3820 family protein K09954 K09954; uncharacterized protein D PU634_02885 TraB/GumN family protein K09973 K09973; uncharacterized protein D PU634_11755 HutD family protein K09975 K09975; uncharacterized protein D PU634_06410 DUF1853 family protein K09977 K09977; uncharacterized protein D PU634_15115 YdbL family protein K09978 K09978; uncharacterized protein D PU634_01285 YjfI family protein K09980 K09980; uncharacterized protein D PU634_16660 metal-sensing transcriptional repressor K07807 K07807; uncharacterized protein D PU634_01265 TIGR00153 family protein K07220 K07220; uncharacterized protein D PU634_17030 imelysin family protein K07338 K07338; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 24, 2024