+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Onychostruthus taczanowskii (white-rumped snowfinch)</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        121333150 RNMT; mRNA cap guanine-N7 methyltransferase	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        121340035 RNGTT; mRNA-capping enzyme	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        121341288 CDK7; cyclin-dependent kinase 7 isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        121335844 CMTR1; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        121333899 CMTR2; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2	K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] 
E        121343632 RAMAC; RNA guanine-N7 methyltransferase activating subunit isoform X1	K18708 FAM103A1; RNMT-activating mini protein 
D      Cap binding complex
E        121332688 NCBP1; nuclear cap-binding protein subunit 1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        121331937 nuclear cap-binding protein subunit 2	K12883 NCBP2; nuclear cap-binding protein subunit 2 
E        121341165 NCBP2; nuclear cap-binding protein subunit 2 isoform X1	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        121333825 NUDT21; cleavage and polyadenylation specificity factor subunit 5	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        121339428 CPSF6; cleavage and polyadenylation specificity factor subunit 6 isoform X1	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
E        121340058 CPSF7; cleavage and polyadenylation specificity factor subunit 7 isoform X1	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        121334799 CLP1; polyribonucleotide 5'-hydroxyl-kinase Clp1	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
E        121340952 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        121331623 CPSF2; cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        121344847 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        121334466 CPSF4; cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        121338441 CPSF4L; putative cleavage and polyadenylation specificity factor subunit 4-like protein	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        121334957 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 isoform X1	K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 
E        121346518 pre-mRNA 3'-end-processing factor FIP1-like isoform X1	K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 
E        121342139 WDR33; pre-mRNA 3' end processing protein WDR33 isoform X1	K15542 PFS2; polyadenylation factor subunit 2 
E        121347234 WDR82; WD repeat-containing protein 82	K14962 WDR82; COMPASS component SWD2 
E        121338915 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        121339690 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        121340629 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        121343964 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        121343006 CSTF1; cleavage stimulation factor subunit 1 isoform X1	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        121331859 CSTF2; cleavage stimulation factor subunit 2 isoform X1	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        121345951 CSTF3; cleavage stimulation factor subunit 3 isoform X1	K14408 CSTF3; cleavage stimulation factor subunit 3 
D      U7-dependent histone pre-mRNA processing factors
E        121343764 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B'	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        121344500 SNRPD3; small nuclear ribonucleoprotein Sm D3	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        121345523 SNRPE; small nuclear ribonucleoprotein E isoform X1	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        121338635 SNRPF; small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        121342821 LSM10; U7 snRNA-associated Sm-like protein LSm10	K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 
E        121332480 LSM11; U7 snRNA-associated Sm-like protein LSm11 isoform X1	K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 
E        121331623 CPSF2; cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        121344847 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        121331859 CSTF2; cleavage stimulation factor subunit 2 isoform X1	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        121335052 histone RNA hairpin-binding protein	K18710 SLBP; histone RNA hairpin-binding protein 
E        121340006 CASP8AP2; CASP8-associated protein 2 isoform X1	K25593 CASP8AP2; CASP8-associated protein 2 
D      DRB sensitivity inducing factor (DSIF) complex
E        121346854 SUPT4H1; transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
D      N6-methyltransferase complex
E        121332965 METTL14; N6-adenosine-methyltransferase non-catalytic subunit	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        121333223 METTL4; N(6)-adenine-specific methyltransferase METTL4 isoform X1	K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] 
E        121339304 METTL16; RNA N6-adenosine-methyltransferase METTL16	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        121346132 pre-mRNA-splicing regulator WTAP	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        121340182 VIRMA; protein virilizer homolog	K22910 VIRMA; protein virilizer 
E        121345647 RBM15; RNA-binding protein 15	K13190 RBM15; RNA-binding protein 15 
E        121347340 RBM15B; putative RNA-binding protein 15B	K13190 RBM15; RNA-binding protein 15 
E        121337239 ZC3H13; zinc finger CCCH domain-containing protein 13 isoform X1	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        121336384 CBLL1; E3 ubiquitin-protein ligase Hakai isoform X1	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
D      Poly(A) addition factors
E        121334626 PAPOLA; poly(A) polymerase alpha isoform X1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        121342637 PAPOLG; poly(A) polymerase gamma	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        121341251 TENT2; poly(A) RNA polymerase GLD2 isoform X1	K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] 
E        121341314 speckle targeted PIP5K1A-regulated poly(A) polymerase-like	K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52] 
D      Negative regulators of mRNA 3' end processing
E        121339733 BARD1; BRCA1-associated RING domain protein 1	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        121344181 RBM26; RNA-binding protein 26 isoform X1	K13192 RBM26; RNA-binding protein 26 
E        121334050 FTO; alpha-ketoglutarate-dependent dioxygenase FTO isoform X1	K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        121334406 ALKBH5; RNA demethylase ALKBH5	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        121343874 TAR DNA-binding protein 43	K23600 TARDBP; TAR DNA-binding protein 43 
C    Other processing factors
D      121347077 DHX40; probable ATP-dependent RNA helicase DHX40 isoform X1	K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6] 
D      121332844 DNA/RNA-binding protein KIN17-like	K13102 KIN; DNA/RNA-binding protein KIN17 
D      121340550 KIN; DNA/RNA-binding protein KIN17 isoform X1	K13102 KIN; DNA/RNA-binding protein KIN17 
D      121335327 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8	K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-] 
D      121334655 METTL22; methyltransferase-like protein 22 isoform X1	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      121340011 TENT5A; terminal nucleotidyltransferase 5A	K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-] 
D      121342868 TENT5B; terminal nucleotidyltransferase 5B	K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-] 
D      121339339 TENT5C; terminal nucleotidyltransferase 5C isoform X1	K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] 
D      121331843 TENT5D; terminal nucleotidyltransferase 5D	K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19] 
D      121332554 ZC3H14; zinc finger CCCH domain-containing protein 14 isoform X1	K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        121335688 RBM8A; RNA-binding protein 8A isoform X1	K12876 RBM8A; RNA-binding protein 8A 
E        121344941 MAGOH; protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        121338517 ALYREF; THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        121335833 EIF4A3; eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        121347423 CCDC174; coiled-coil domain-containing protein 174	K25178 CCDC174; coiled-coil domain-containing protein 174 
E        121347627 CASC3; protein CASC3	K14323 CASC3; protein CASC3 
E        121341987 SAP18; histone deacetylase complex subunit SAP18 isoform X1	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        121332656 PNN; pinin	K13114 PNN; pinin 
E        121337843 RNPS1; RNA-binding protein with serine-rich domain 1	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        121342737 SRRM1; serine/arginine repetitive matrix protein 1 isoform X1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
D      TREX complex
E        121333206 THOC1; THO complex subunit 1	K12878 THOC1; THO complex subunit 1 
E        121331681 THOC2; THO complex subunit 2 isoform X1	K12879 THOC2; THO complex subunit 2 
E        121332231 THOC3; THO complex subunit 3	K12880 THOC3; THO complex subunit 3 
E        121338517 ALYREF; THO complex subunit 4	K12881 THOC4; THO complex subunit 4 
E        121344495 THOC5; THO complex subunit 5 homolog isoform X1	K13174 THOC5; THO complex subunit 5 
E        121347420 THOC7; THO complex subunit 7 homolog	K13176 THOC7; THO complex subunit 7 
E        121335624 chromatin target of PRMT1 protein isoform X1	K28424 CHTOP; chromatin target of PRMT1 protein 
D      TREX-2 complex
E        121343149 PCID2; PCI domain-containing protein 2 isoform X1	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        121340164 ENY2; transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        121346448 CETN2; centrin-2	K10840 CETN2; centrin-2 
E        121332633 CETN3; centrin-3	K16466 CETN3; centrin-3 
E        121339535 germinal-center associated nuclear protein isoform X1	K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48] 
D      Nuclear pore complex
E        121344572 TPR; nucleoprotein TPR isoform X1	K09291 TPR; nucleoprotein TPR 
E        121343057 RAE1; mRNA export factor	K14298 RAE1; mRNA export factor 
E        121347110 SEC13; protein SEC13 homolog	K14004 SEC13; protein transport protein SEC13 
E        121332790 NUP37; nucleoporin Nup37	K14302 NUP37; nuclear pore complex protein Nup37 
E        121338250 NUP85; nuclear pore complex protein Nup85	K14304 NUP85; nuclear pore complex protein Nup85 
E        121346141 NUP43; nucleoporin Nup43	K14305 NUP43; nuclear pore complex protein Nup43 
E        121332762 NUP50; nuclear pore complex protein Nup50	K14295 NUP50; nuclear pore complex protein Nup50 
E        121348169 NUP54; nucleoporin p54 isoform X1	K14308 NUP54; nuclear pore complex protein Nup54 
E        121346481 nuclear pore glycoprotein p62-like	K14306 NUP62; nuclear pore complex protein Nup62 
E        121345697 NUP88; nuclear pore complex protein Nup88	K14318 NUP88; nuclear pore complex protein Nup88 
E        121333843 NUP93; nuclear pore complex protein Nup93 isoform X1	K14309 NUP93; nuclear pore complex protein Nup93 
E        121334216 NUP98; nuclear pore complex protein Nup98-Nup96	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        121339458 NUP107; nuclear pore complex protein Nup107	K14301 NUP107; nuclear pore complex protein Nup107 
E        121334732 nuclear pore complex protein Nup133-like	K14300 NUP133; nuclear pore complex protein Nup133 
E        121337032 NUP188; nucleoporin NUP188 isoform X1	K14311 NUP188; nuclear pore complex protein Nup188 
E        121340457 NUP153; nuclear pore complex protein Nup153 isoform X1	K14296 NUP153; nuclear pore complex protein Nup153 
E        121331519 NUP155; nuclear pore complex protein Nup155 isoform X1	K14312 NUP155; nuclear pore complex protein Nup155 
E        121336782 NUP160; nuclear pore complex protein Nup160	K14303 NUP160; nuclear pore complex protein Nup160 
E        121339723 NUP35; nucleoporin NUP35 isoform X1	K14313 NUP35; nuclear pore complex protein Nup53 
E        121338651 NUP205; nuclear pore complex protein Nup205 isoform X1	K14310 NUP205; nuclear pore complex protein Nup205 
E        121333297 NUP210; nuclear pore membrane glycoprotein 210	K14314 NUP210; nuclear pore complex protein Nup210 
E        121336968 NUP214; nuclear pore complex protein Nup214 isoform X1	K14317 NUP214; nuclear pore complex protein Nup214 
E        121346846 POM121; nuclear envelope pore membrane protein POM 121	K14316 POM121; nuclear pore complex protein Nup121 
E        121341988 NUP58; nucleoporin p58/p45 isoform X1	K14307 NUPL1; nucleoporin p58/p45 
E        121339588 NUP42; nucleoporin NUP42	K14321 NUPL2; nucleoporin-like protein 2 
E        121344204 nucleoporin NUP42-like	K14321 NUPL2; nucleoporin-like protein 2 
E        121345042 NDC1; nucleoporin NDC1	K14315 NDC1; nucleoporin NDC1 
E        121343225 E3 SUMO-protein ligase RanBP2-like isoform X1	K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] 
E        121342117 SENP2; sentrin-specific protease 2	K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68] 
E        121335584 AAAS; aladin	K14320 AAAS; aladin 
E        121332633 CETN3; centrin-3	K16466 CETN3; centrin-3 
E        121336866 GLE1; nucleoporin GLE1	K18723 GLE1; nucleoporin GLE1 
E        121341460 nucleoporin GLE1-like	K18723 GLE1; nucleoporin GLE1 
E        121331760 NXT2; NTF2-related export protein 2 isoform X1	K14285 NXT1_2; NTF2-related export protein 1/2 
D      Ran-mediated transport factors
E        121338918 RAN; GTP-binding nuclear protein Ran	K07936 RAN; GTP-binding nuclear protein Ran 
E        121343504 ANP32A; acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1	K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D 
E        121341830 acidic leucine-rich nuclear phosphoprotein 32 family member B isoform X1	K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B 
E        121345414 ELAVL1; ELAV-like protein 1 isoform X1	K13088 ELAVL1; ELAV-like protein 1 
E        121333645 ELAVL2; ELAV-like protein 2 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        121342286 ELAV-like protein 3	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        121344982 ELAVL4; ELAV-like protein 4	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        121332230 FAF2; FAS-associated factor 2 isoform X1	K18726 FAF2; FAS-associated factor 2 
E        121345270 transitional endoplasmic reticulum ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        121338824 VCPKMT; protein-lysine methyltransferase METTL21D isoform X1	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        121341467 transportin-2	K18727 TNPO2; transportin-2 
E        121342595 XPO1; exportin-1	K14290 XPO1; exportin-1 
E        121346689 XPO7; exportin-7 isoform X1	K18460 XPO7; exportin-7 
E        121342338 RANGAP1; ran GTPase-activating protein 1 isoform X1	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        121345756 TAF15; TATA-binding protein-associated factor 2N isoform X1	K14651 TAF15; transcription initiation factor TFIID subunit 15 
D      eIF4F and regulatory proteins
E        121332354 EIF4E1B; eukaryotic translation initiation factor 4E type 1B	K03259 EIF4E; translation initiation factor 4E 
E        121336580 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        121346555 EIF4E; eukaryotic translation initiation factor 4E isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        121336592 EIF4A2; eukaryotic initiation factor 4A-II	K03257 EIF4A; translation initiation factor 4A 
E        121336475 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        121341558 EIF4G2; eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        121343886 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        121342838 EIF4B; eukaryotic translation initiation factor 4B isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        121333321 EIF4H; eukaryotic translation initiation factor 4H isoform X1	K24086 EIF4H; translation initiation factor 4H 
E        121346813 EIF4EBP1; eukaryotic translation initiation factor 4E-binding protein 1 isoform X1	K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1 
E        121336141 EIF4EBP2; eukaryotic translation initiation factor 4E-binding protein 2	K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 
E        121344453 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        121331714 ANGEL1; protein angel homolog 1 isoform X1	K18729 ANGEL; protein angel 
E        121340644 ANGEL2; protein angel homolog 2 isoform X1	K18729 ANGEL; protein angel 
E        121331750 FMR1; synaptic functional regulator FMR1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        121336611 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        121332397 CYFIP2; cytoplasmic FMR1-interacting protein 2	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        121345308 CYFIP1; cytoplasmic FMR1-interacting protein 1 isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        121332280 GEMIN5; gem-associated protein 5 isoform X1	K13133 GEMIN5; gem associated protein 5 
E        121335152 TACC3; transforming acidic coiled-coil-containing protein 3 isoform X1	K14283 TACC3; transforming acidic coiled-coil-containing protein 3 
E        121332356 CPEB4; cytoplasmic polyadenylation element-binding protein 4	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121335094 CPEB2; cytoplasmic polyadenylation element-binding protein 2 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121341901 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121343472 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121333451 DDX3X; ATP-dependent RNA helicase DDX3X	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        121341113 GIGYF2; GRB10-interacting GYF protein 2 isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        121340117 PABPC1; polyadenylate-binding protein 1 isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        121342746 PABPC4; polyadenylate-binding protein 4 isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        121343805 PABPC1L; polyadenylate-binding protein 1-like	K13126 PABPC; polyadenylate-binding protein 
E        121346643 PAIP1; polyadenylate-binding protein-interacting protein 1 isoform X1	K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
E        121335102 PAIP2B; polyadenylate-binding protein-interacting protein 2B isoform X1	K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 
E        121343017 PAIP2; polyadenylate-binding protein-interacting protein 2	K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 
E        121337722 DEAF1; deformed epidermal autoregulatory factor 1 homolog isoform X1	K23041 DEAF1; deformed epidermal autoregulatory factor 1 
E        121331835 MCTS1; malignant T-cell-amplified sequence 1	K07575 MCTS; malignant T-cell-amplified sequence 
E        121338841 DENR; density-regulated protein	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
E        121340963 C->U-editing enzyme APOBEC-1-like	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        121340993 C->U-editing enzyme APOBEC-1-like isoform X1	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        121336111 A1CF; APOBEC1 complementation factor isoform X1	K24978 A1CF; APOBEC1 complementation factor 
D      Other transport factors
E        121335510 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        121335602 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        121341753 DAZAP1; DAZ-associated protein 1 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        121344528 MSI1; RNA-binding protein Musashi homolog 1 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        121347026 MSI2; RNA-binding protein Musashi homolog 2 isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        121346154 HBS1L; HBS1-like protein isoform X1	K14416 HBS1; elongation factor 1 alpha-like protein 
E        121346641 PELO; protein pelota homolog	K06965 PELO; protein pelota 
E        121333788 PABPN1L; embryonic polyadenylate-binding protein 2 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        121343973 ATP-dependent RNA helicase DDX19A isoform X1	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        121340918 DDX25; ATP-dependent RNA helicase DDX25	K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7] 
E        121339180 XAB2; pre-mRNA-splicing factor SYF1	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        121338756 SAP domain-containing ribonucleoprotein isoform X1	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        121336020 RCC1; regulator of chromosome condensation isoform X1	K11493 RCC1; regulator of chromosome condensation 
E        121341502 la-related protein 6-like	K18733 LARP6; la-related protein 6 
E        121343416 LARP6; la-related protein 6	K18733 LARP6; la-related protein 6 
E        121332439 PURA; transcriptional activator protein Pur-alpha	K21772 PURA; transcriptional activator protein Pur-alpha 
E        121346676 PURB; transcriptional activator protein Pur-beta	K21799 PURB; transcriptional activator protein Pur-beta 
E        121342306 POLDIP3; polymerase delta-interacting protein 3 isoform X1	K22414 POLDIP3; polymerase delta-interacting protein 3 
E        121345522 ZC3H11A; zinc finger CCCH domain-containing protein 11A isoform X1	K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 
E        121343529 PATL2; LOW QUALITY PROTEIN: protein PAT1 homolog 2	K24823 PATL2; protein PAT1 homolog 2 
C    Surveillance factors
D      Surveillance complex
E        121342949 ETF1; eukaryotic peptide chain release factor subunit 1	K03265 ETF1; peptide chain release factor subunit 1 
E        121334378 GSPT1; eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1	K03267 ERF3; peptide chain release factor subunit 3 
E        121347103 UPF1; regulator of nonsense transcripts 1 isoform X1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        121340547 UPF2; regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
E        121331732 UPF3B; regulator of nonsense transcripts 3B	K14328 UPF3; regulator of nonsense transcripts 3 
E        121343204 UPF3A; regulator of nonsense transcripts 3A isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
D      Protein phosphatase 2A
E        121331979 PPP2CB; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        121332297 PPP2CA; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        121339659 PPP2R1A; LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        121332246 PPP2R2B; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        121335043 PPP2R2C; protein phosphatase 2, regulatory subunit B, gamma	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        121341764 PPP2R2D; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        121346744 PPP2R2A; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        121331773 PPP2R3C; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        121342066 PPP2R3A; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        121345350 PPP2R3B; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        121340633 PPP2R5A; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        121341709 PPP2R5C; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        121341876 PPP2R5E; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        121346393 PPP2R5D; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        121334377 SMG1; serine/threonine-protein kinase SMG1 isoform X1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        121332109 SMG5; protein SMG5 isoform X1	K11125 SMG5; protein SMG5 
E        121345867 SMG6; telomerase-binding protein EST1A isoform X1	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        121344586 SMG7; protein SMG7 isoform X1	K14409 SMG7; protein SMG7 
E        121347075 SMG8; protein SMG8 isoform X1	K18734 SMG8; protein SMG8 
E        121341113 GIGYF2; GRB10-interacting GYF protein 2 isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        121332730 SECISBP2; selenocysteine insertion sequence-binding protein 2 isoform X1	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        121343349 SECISBP2L; selenocysteine insertion sequence-binding protein 2-like isoform X1	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        121342326 GTPBP1; GTP-binding protein 1	K24887 GTPBP1; GTP-binding protein 1 
C    Factors involved in mRNA localization
D      Cargo complex
E        121347913 PUM3; pumilio homolog 3	K14844 PUF6; pumilio homology domain family member 6 
E        121343394 MYO5C; unconventional myosin-Vc	K10357 MYO5; myosin V 
E        121343534 MYO5A; unconventional myosin-Va	K10357 MYO5; myosin V 
E        121346094 MYO5B; unconventional myosin-Vb	K10357 MYO5; myosin V 
E        121332837 BICD1; protein bicaudal D homolog 1 isoform X1	K18739 BICD; protein bicaudal D 
E        121333338 BICD2; protein bicaudal D homolog 2 isoform X1	K18739 BICD; protein bicaudal D 
D      Factors that have mRNA localization signals
E        121334393 ACTB; actin, cytoplasmic 1	K05692 ACTB_G1; actin beta/gamma 1 
E        121338266 ACTG1; actin, cytoplasmic 2	K05692 ACTB_G1; actin beta/gamma 1 
E        121343627 actin, cytoplasmic type 5	K05692 ACTB_G1; actin beta/gamma 1 
E        121337816 myelin basic protein isoform X1	K17269 MBP; myelin basic protein 
E        121338178 VIM; vimentin	K07606 VIM; vimentin 
E        121333826 metallothionein-1	K14739 MT1_2; metallothionein 1/2 
E        121337475 MYC; myc proto-oncogene protein	K04377 MYC; Myc proto-oncogene protein 
E        121347158 GDF1; embryonic growth/differentiation factor 1	K05495 GDF1; growth differentiation factor 1 
E        121344462 T-box-containing protein TBX6L	K10180 TBX6; T-box protein 6 
E        121341757 NANOS1; nanos homolog 1	K18741 NANOS1; protein nanos 1 
D      Trans-acting binding proteins
E        121336937 FUBP3; far upstream element-binding protein 3 isoform X1	K13210 FUBP; far upstream element-binding protein 
E        121344965 FUBP1; far upstream element-binding protein 1 isoform X1	K13210 FUBP; far upstream element-binding protein 
E        121333091 EEF1A2; elongation factor 1-alpha 2	K03231 EEF1A; elongation factor 1-alpha 
E        121339151 EEF1A1; elongation factor 1-alpha 1	K03231 EEF1A; elongation factor 1-alpha 
E        121339639 HNRNPA2B1; heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1	K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1 
E        121332167 HAX1; HCLS1-associated protein X-1	K16220 HAX1; HCLS1-associated protein X-1 
E        121341151 AGFG1; arf-GAP domain and FG repeat-containing protein 1 isoform X1	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
E        121340343 STAU2; double-stranded RNA-binding protein Staufen homolog 2 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        121343022 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        121339569 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3	K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3 
E        121341671 PTBP1; polypyrimidine tract-binding protein 1 isoform X1	K13218 PTBP1; polypyrimidine tract-binding protein 1 
E        121332356 CPEB4; cytoplasmic polyadenylation element-binding protein 4	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121335094 CPEB2; cytoplasmic polyadenylation element-binding protein 2 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121341901 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121343472 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
D      Other mRNA localization factors
E        121331750 FMR1; synaptic functional regulator FMR1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        121336611 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        121332397 CYFIP2; cytoplasmic FMR1-interacting protein 2	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        121345308 CYFIP1; cytoplasmic FMR1-interacting protein 1 isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        121335578 PCBP2; poly(rC)-binding protein 2 isoform X1	K13162 PCBP2; poly(rC)-binding protein 2 
E        121336745 PCBP3; poly(rC)-binding protein 3 isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        121337775 poly(rC)-binding protein 3-like isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        121347242 PCBP4; poly(rC)-binding protein 4	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        121339140 CAPRIN1; caprin-1 isoform X1	K18743 CAPRIN1; caprin-1 
E        121332904 CAPRIN2; caprin-2 isoform X1	K18744 CAPRIN2; caprin-2 
E        121333063 YBX1; Y-box-binding protein 1 isoform X1	K09276 YBX1; Y-box-binding protein 1 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        121341156 XRN1; 5'-3' exoribonuclease 1 isoform X1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        121342876 AGO3; protein argonaute-3	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        121342877 protein argonaute-1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        121342881 AGO4; protein argonaute-4	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        121344649 AGO2; protein argonaute-2 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        121332354 EIF4E1B; eukaryotic translation initiation factor 4E type 1B	K03259 EIF4E; translation initiation factor 4E 
E        121336580 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        121346555 EIF4E; eukaryotic translation initiation factor 4E isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        121347103 UPF1; regulator of nonsense transcripts 1 isoform X1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        121333451 DDX3X; ATP-dependent RNA helicase DDX3X	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        121340823 DDX6; probable ATP-dependent RNA helicase DDX6	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        121332161 MEX3A; RNA-binding protein MEX3A	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        121341464 RNA-binding E3 ubiquitin-protein ligase MEX3C-like	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        121343559 MEX3B; RNA-binding protein MEX3B	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        121346086 MEX3D; RNA-binding protein MEX3D	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        121334865 FASTK; fas-activated serine/threonine kinase	K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8] 
E        121331637 LSM14A; protein LSM14 homolog A isoform X1	K18749 LSM14; protein LSM14 
E        121343035 LSM14B; protein LSM14 homolog B isoform X1	K18749 LSM14; protein LSM14 
E        121335578 PCBP2; poly(rC)-binding protein 2 isoform X1	K13162 PCBP2; poly(rC)-binding protein 2 
E        121333063 YBX1; Y-box-binding protein 1 isoform X1	K09276 YBX1; Y-box-binding protein 1 
E        121331642 Wilms tumor protein 1-interacting protein isoform X1	K16682 AJUBA; LIM domain-containing protein 
E        121337584 LIMD1; LIM domain-containing protein 1	K16682 AJUBA; LIM domain-containing protein 
E        121340963 C->U-editing enzyme APOBEC-1-like	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        121340993 C->U-editing enzyme APOBEC-1-like isoform X1	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        121348005 MOV10; helicase MOV-10	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        121342795 PNRC2; proline-rich nuclear receptor coactivator 2	K18751 PNRC2; proline-rich nuclear receptor coactivator 2 
E        121347894 TNPO1; transportin-1	K18752 TNPO1; transportin-1 
E        121334377 SMG1; serine/threonine-protein kinase SMG1 isoform X1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        121332109 SMG5; protein SMG5 isoform X1	K11125 SMG5; protein SMG5 
E        121345867 SMG6; telomerase-binding protein EST1A isoform X1	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        121344586 SMG7; protein SMG7 isoform X1	K14409 SMG7; protein SMG7 
E        121333126 ZFP36L1; mRNA decay activator protein ZFP36L1	K18753 ZFP36L; butyrate response factor 
E        121340640 ZFP36L2; mRNA decay activator protein ZFP36L2	K18753 ZFP36L; butyrate response factor 
E        121341420 LIN28B; protein lin-28 homolog B isoform X1	K18754 LIN28; protein lin-28 
E        121342950 LIN28A; protein lin-28 homolog A	K18754 LIN28; protein lin-28 
E        121334924 HTT; huntingtin isoform X1	K04533 HD; huntingtin 
E        121332771 IPO8; importin-8 isoform X1	K18755 IPO8; importin-8 
E        121336150 BICC1; protein bicaudal C homolog 1 isoform X1	K18756 BICC1; protein bicaudal C 
E        121335510 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        121335602 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        121344945 PRKACB; cAMP-dependent protein kinase catalytic subunit beta isoform X1	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        121332550 LARP1; la-related protein 1 isoform X1	K18757 LARP1; la-related protein 1 
E        121339907 LARP1B; la-related protein 1B isoform X1	K18757 LARP1; la-related protein 1 
E        121338871 ATXN2; ataxin-2 isoform X1	K23625 ATXN2_2L; ataxin 2/2L 
D      P-body specific factors
E        121333120 DCP2; m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        121347303 DCP1A; mRNA-decapping enzyme 1A	K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-] 
E        121332893 DCP1B; mRNA-decapping enzyme 1B	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        121346786 LSM1; U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        121347429 LSM3; U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        121346693 LSM4; U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        121333664 LSM5; U6 snRNA-associated Sm-like protein LSm5 isoform X1	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        121339898 LSM6; U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        121345878 LSM7; U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        121344789 LSM8; LSM8 homolog, U6 small nuclear RNA associated	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        121337895 KLC4; kinesin light chain 4 isoform X1	K10407 KLC; kinesin light chain 
E        121345441 KLC1; kinesin light chain 1 isoform X1	K10407 KLC; kinesin light chain 
E        121343394 MYO5C; unconventional myosin-Vc	K10357 MYO5; myosin V 
E        121343534 MYO5A; unconventional myosin-Va	K10357 MYO5; myosin V 
E        121346094 MYO5B; unconventional myosin-Vb	K10357 MYO5; myosin V 
E        121332825 TUBA8; tubulin alpha-8 chain isoform X1	K07374 TUBA; tubulin alpha 
E        121334151 TUBAL3; tubulin alpha chain-like 3	K07374 TUBA; tubulin alpha 
E        121334288 tubulin alpha-1B chain isoform X1	K07374 TUBA; tubulin alpha 
E        121334289 tubulin alpha-1C chain	K07374 TUBA; tubulin alpha 
E        121335372 tubulin alpha-5 chain isoform X1	K07374 TUBA; tubulin alpha 
E        121336480 tubulin alpha-3 chain-like isoform X1	K07374 TUBA; tubulin alpha 
E        121345543 tubulin alpha chain, testis-specific-like	K07374 TUBA; tubulin alpha 
E        121332356 CPEB4; cytoplasmic polyadenylation element-binding protein 4	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121335094 CPEB2; cytoplasmic polyadenylation element-binding protein 2 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121341901 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121343472 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        121332280 GEMIN5; gem-associated protein 5 isoform X1	K13133 GEMIN5; gem associated protein 5 
E        121335152 TACC3; transforming acidic coiled-coil-containing protein 3 isoform X1	K14283 TACC3; transforming acidic coiled-coil-containing protein 3 
E        121334342 TNRC6A; trinucleotide repeat-containing gene 6A protein isoform X1	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        121338507 TNRC6C; trinucleotide repeat-containing gene 6C protein isoform X1	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        121342460 TNRC6B; trinucleotide repeat-containing gene 6B protein isoform X1	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        121334085 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        121339486 CNOT2; CCR4-NOT transcription complex subunit 2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        121335987 CNOT4; CCR4-NOT transcription complex subunit 4	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        121332275 CNOT6; CCR4-NOT transcription complex subunit 6 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        121348001 CNOT6L; CCR4-NOT transcription complex subunit 6-like isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        121332282 CNOT8; CCR4-NOT transcription complex subunit 8	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        121334923 CNOT7; CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        121331640 GARRE1; granule associated Rac and RHOG effector protein 1 isoform X1	K26671 GARRE1; granule associated Rac and RHOG effector protein 1 
E        121336651 DIS3L2; DIS3-like exonuclease 2 isoform X1	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        121337494 PAN2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        121341966 PAN3; PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        121338320 TOB1; protein Tob1	K14443 TOB; protein Tob/BTG 
E        121338595 BTG1; protein BTG1	K14443 TOB; protein Tob/BTG 
E        121340889 BTG4; protein BTG4	K14443 TOB; protein Tob/BTG 
E        121342317 TOB2; protein Tob2 isoform X1	K14443 TOB; protein Tob/BTG 
E        121345553 BTG2; protein BTG2	K14443 TOB; protein Tob/BTG 
E        121347114 protein BTG1-like	K14443 TOB; protein Tob/BTG 
E        121344453 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        121339930 PATL1; protein PAT1 homolog 1 isoform X1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        121343319 EDC3; enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        121333923 EDC4; enhancer of mRNA-decapping protein 4	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        121340547 UPF2; regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
E        121331732 UPF3B; regulator of nonsense transcripts 3B	K14328 UPF3; regulator of nonsense transcripts 3 
E        121343204 UPF3A; regulator of nonsense transcripts 3A isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
E        121337664 TRIM71; LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        121335840 EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase isoform X1	K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1] 
E        121335255 ZAR1; zygote arrest protein 1	K18762 ZAR1; zygote arrest protein 1 
E        121342021 ZAR1L; LOW QUALITY PROTEIN: ZAR1-like protein	K18762 ZAR1; zygote arrest protein 1 
E        121333093 YTHDF1; YTH domain-containing family protein 1 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
E        121333591 YTHDF2; YTH domain-containing family protein 2	K20102 YTHDF; YTH domain-containing family protein 
E        121340366 YTHDF3; YTH domain-containing family protein 3 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        121336004 TIA1; nucleolysin TIA-1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        121341620 TIAL1; nucleolysin TIAR isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        121340117 PABPC1; polyadenylate-binding protein 1 isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        121342746 PABPC4; polyadenylate-binding protein 4 isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        121343805 PABPC1L; polyadenylate-binding protein 1-like	K13126 PABPC; polyadenylate-binding protein 
E        121340343 STAU2; double-stranded RNA-binding protein Staufen homolog 2 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        121343022 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        121331750 FMR1; synaptic functional regulator FMR1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        121336611 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        121345414 ELAVL1; ELAV-like protein 1 isoform X1	K13088 ELAVL1; ELAV-like protein 1 
E        121332324 G3BP1; ras GTPase-activating protein-binding protein 1 isoform X1	K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3] 
E        121348153 G3BP2; ras GTPase-activating protein-binding protein 2 isoform X1	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        121336518 EIF2A; eukaryotic translation initiation factor 2A isoform X1	K15026 EIF2A; translation initiation factor 2A 
E        121334527 EIF3B; eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        121336592 EIF4A2; eukaryotic initiation factor 4A-II	K03257 EIF4A; translation initiation factor 4A 
E        121335833 EIF4A3; eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        121342838 EIF4B; eukaryotic translation initiation factor 4B isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        121336475 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        121341558 EIF4G2; eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        121343886 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        121331724 RPS6KA6; ribosomal protein S6 kinase alpha-6 isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        121332585 RPS6KA2; ribosomal protein S6 kinase alpha-2	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        121333423 RPS6KA3; ribosomal protein S6 kinase alpha-3 isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        121342944 RPS6KA1; ribosomal protein S6 kinase alpha-1 isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        121338696 RACK1; receptor of activated protein C kinase 1	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        121336904 TRAF2; TNF receptor-associated factor 2 isoform X1	K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27] 
E        121337253 TDRD3; tudor domain-containing protein 3 isoform X1	K18404 TDRD3; tudor domain-containing protein 3 
E        121333705 LARP4; la-related protein 4 isoform X1	K18763 LARP4; la-related protein 4 
E        121337918 LARP4B; la-related protein 4B isoform X1	K18763 LARP4; la-related protein 4 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        121347303 DCP1A; mRNA-decapping enzyme 1A	K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-] 
E        121332893 DCP1B; mRNA-decapping enzyme 1B	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        121333120 DCP2; m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        121340823 DDX6; probable ATP-dependent RNA helicase DDX6	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        121343319 EDC3; enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        121333923 EDC4; enhancer of mRNA-decapping protein 4	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        121339930 PATL1; protein PAT1 homolog 1 isoform X1	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
D      Lsm complex
E        121346786 LSM1; U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        121347429 LSM3; U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        121346693 LSM4; U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        121333664 LSM5; U6 snRNA-associated Sm-like protein LSm5 isoform X1	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        121339898 LSM6; U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        121345878 LSM7; U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        121344789 LSM8; LSM8 homolog, U6 small nuclear RNA associated	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        121341156 XRN1; 5'-3' exoribonuclease 1 isoform X1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        121342641 XRN2; 5'-3' exoribonuclease 2	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
D      Other 5'-3' decay factors
E        121340875 DCPS; m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        121338471 HELZ; probable helicase with zinc finger domain isoform X1	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
C    3'-5' decay
D      Core exosome factors
E        121341655 EXOSC1; exosome complex component CSL4 isoform X1	K07573 CSL4; exosome complex component CSL4 
E        121337119 EXOSC2; exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        121336091 EXOSC3; exosome complex component RRP40	K03681 RRP40; exosome complex component RRP40 
E        121347756 EXOSC5; exosome complex component RRP46	K12590 RRP46; exosome complex component RRP46 
E        121333834 EXOSC6; LOW QUALITY PROTEIN: exosome complex component MTR3	K12587 MTR3; exosome complex component MTR3 
E        121337598 EXOSC7; exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
E        121337247 EXOSC8; exosome complex component RRP43	K12586 RRP43; exosome complex component RRP43 
E        121339936 EXOSC9; exosome complex component RRP45 isoform X1	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        121344175 DIS3; exosome complex exonuclease RRP44	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        121343584 DIS3L; DIS3-like exonuclease 1 isoform X1	K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-] 
E        121343896 EXOSC10; exosome component 10	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        121335805 C1D; nuclear nucleic acid-binding protein C1D	K12592 C1D; exosome complex protein LRP1 
E        121334068 MPHOSPH6; M-phase phosphoprotein 6	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
D      TRAMP complex
E        121333965 terminal nucleotidyltransferase 4B	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        121339751 TENT4A; terminal nucleotidyltransferase 4A isoform X1	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        121337717 ZCCHC7; zinc finger CCHC domain-containing protein 7	K12597 AIR1_2; protein AIR1/2 
E        121346606 MTREX; exosome RNA helicase MTR4	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        121345377 TTC37; tetratricopeptide repeat protein 37 isoform X1	K12600 SKI3; superkiller protein 3 
E        121348332 WDR61; WD repeat-containing protein 61 isoform X1	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        121332275 CNOT6; CCR4-NOT transcription complex subunit 6 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        121348001 CNOT6L; CCR4-NOT transcription complex subunit 6-like isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        121334085 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        121339486 CNOT2; CCR4-NOT transcription complex subunit 2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        121335987 CNOT4; CCR4-NOT transcription complex subunit 4	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        121332282 CNOT8; CCR4-NOT transcription complex subunit 8	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        121334923 CNOT7; CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        121335860 CNOT9; CCR4-NOT transcription complex subunit 9	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        121337624 CNOT10; CCR4-NOT transcription complex subunit 10	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
D      Pan complex
E        121337494 PAN2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        121341966 PAN3; PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
D      Other 3'-5' decay factors
E        121334338 PARN; poly(A)-specific ribonuclease PARN isoform X1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        121346125 PNLDC1; poly(A)-specific ribonuclease PNLDC1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        121336560 DHX36; ATP-dependent DNA/RNA helicase DHX36	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        121338320 TOB1; protein Tob1	K14443 TOB; protein Tob/BTG 
E        121338595 BTG1; protein BTG1	K14443 TOB; protein Tob/BTG 
E        121340889 BTG4; protein BTG4	K14443 TOB; protein Tob/BTG 
E        121342317 TOB2; protein Tob2 isoform X1	K14443 TOB; protein Tob/BTG 
E        121345553 BTG2; protein BTG2	K14443 TOB; protein Tob/BTG 
E        121347114 protein BTG1-like	K14443 TOB; protein Tob/BTG 
E        121339918 NOCT; nocturnin	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        121331381 ERI1; 3'-5' exoribonuclease 1 isoform X1	K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] 
E        121334590 ERI2; ERI1 exoribonuclease 2	K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] 
E        121340875 DCPS; m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        121347382 PDE12; 2',5'-phosphodiesterase 12	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        121348300 IREB2; iron-responsive element-binding protein 2 isoform X1	K22416 IREB2; iron-responsive element-binding protein 2 
E        121338471 HELZ; probable helicase with zinc finger domain isoform X1	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
E        121331550 HELZ2; helicase with zinc finger domain 2 isoform X1	K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6] 
E        121347602 NRDE2; nuclear exosome regulator NRDE2 isoform X1	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        121340332 SAMD4A; protein Smaug homolog 1 isoform X1	K27396 SMG; protein Smaug 
E        121333055 FOCAD; focadhesin isoform X1	K27498 FOCAD; focadhesin 
C    Other degradation factors
D      RNases
E        121331927 ZC3H12B; probable ribonuclease ZC3H12B	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        121341134 ZC3H12C; probable ribonuclease ZC3H12C	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        121342846 ZC3H12A; endoribonuclease ZC3H12A isoform X1	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        121346059 ZC3H12D; probable ribonuclease ZC3H12D	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        121348358 DROSHA; ribonuclease 3	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
E        121340755 REXO2; oligoribonuclease, mitochondrial	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
D      Other RNA degradosome components
E        121339231 ENO2; gamma-enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        121343870 ENO1; alpha-enolase isoform X1	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        121342665 PNPT1; polyribonucleotide nucleotidyltransferase 1, mitochondrial	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        121335573 PFKM; ATP-dependent 6-phosphofructokinase, muscle type	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        121338203 ATP-dependent 6-phosphofructokinase, platelet type isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        121342166 PFKL; ATP-dependent 6-phosphofructokinase, liver type isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        121342880 HSPA9; stress-70 protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        121335394 HSPD1; 60 kDa heat shock protein, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        121337119 EXOSC2; exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        121341655 EXOSC1; exosome complex component CSL4 isoform X1	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        121337598 EXOSC7; exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
D      Others
!
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#Last updated: August 27, 2025