+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Opisthorchis viverrini (Southeast Asian liver fluke)

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E T265_15465 hypothetical protein K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E T265_01277 hypothetical protein K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] E T265_14447 hypothetical protein K18708 FAM103A1; RNMT-activating mini protein D Cap binding complex E T265_10968 hypothetical protein K12882 NCBP1; nuclear cap-binding protein subunit 1 E T265_11300 hypothetical protein K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E T265_04165 hypothetical protein K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 E T265_10894 hypothetical protein K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 D Pre-mRNA cleavage factor IIm (CFIIm) E T265_11825 hypothetical protein K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] E T265_06732 hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D Cleavage and polyadenylation specificity factor (CPSF) complex E T265_01349 hypothetical protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E T265_06603 hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E T265_00534 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E T265_15517 hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E T265_11773 hypothetical protein K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 E T265_04343 hypothetical protein K15542 PFS2; polyadenylation factor subunit 2 E T265_05487 hypothetical protein K14962 WDR82; COMPASS component SWD2 E T265_10243 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E T265_15333 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E T265_08568 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E T265_15800 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E T265_00446 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E T265_12540 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E T265_02881 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E T265_03762 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E T265_13111 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E T265_13657 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E T265_05025 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E T265_10500 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E T265_02688 hypothetical protein K14406 CSTF1; cleavage stimulation factor subunit 1 E T265_04793 hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2 E T265_14748 hypothetical protein K14408 CSTF3; cleavage stimulation factor subunit 3 E T265_09261 hypothetical protein K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E T265_07357 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B' E T265_05809 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3 E T265_07341 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E E T265_06603 hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E T265_00534 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E T265_04793 hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2 E T265_09261 hypothetical protein K06100 SYMPK; symplekin D DRB sensitivity inducing factor (DSIF) complex E T265_06123 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4 E T265_09833 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E T265_11801 hypothetical protein K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] E T265_06150 hypothetical protein K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit E T265_01188 hypothetical protein K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] E T265_07570 hypothetical protein K22824 WTAP; pre-mRNA-splicing regulator WTAP E T265_15230 hypothetical protein K22824 WTAP; pre-mRNA-splicing regulator WTAP E T265_00984 hypothetical protein K22910 VIRMA; protein virilizer E T265_00985 hypothetical protein K22910 VIRMA; protein virilizer E T265_00168 hypothetical protein K13190 RBM15; RNA-binding protein 15 E T265_00186 hypothetical protein K13190 RBM15; RNA-binding protein 15 E T265_10724 hypothetical protein K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] D Poly(A) addition factors E T265_02907 hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E T265_13546 hypothetical protein K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] D Negative regulators of mRNA 3' end processing E T265_13252 hypothetical protein K23600 TARDBP; TAR DNA-binding protein 43 E T265_15424 hypothetical protein K23600 TARDBP; TAR DNA-binding protein 43 C Other processing factors D T265_00296 hypothetical protein K13102 KIN; DNA/RNA-binding protein KIN17 D T265_05104 hypothetical protein K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 D T265_15131 hypothetical protein K27103 SRRT; serrate RNA effector molecule B mRNA surveillance and transport factors C Transport factors D EJC complex E T265_01122 hypothetical protein K12876 RBM8A; RNA-binding protein 8A E T265_11153 hypothetical protein K12877 MAGOH; protein mago nashi E T265_15313 hypothetical protein K12881 THOC4; THO complex subunit 4 E T265_06949 hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E T265_10864 hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E T265_01304 hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E T265_02310 hypothetical protein K25178 CCDC174; coiled-coil domain-containing protein 174 E T265_00997 hypothetical protein K14323 CASC3; protein CASC3 E T265_06548 hypothetical protein K14324 SAP18; histone deacetylase complex subunit SAP18 E T265_03246 hypothetical protein K13114 PNN; pinin E T265_04671 hypothetical protein K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus D TREX complex E T265_15203 hypothetical protein K12880 THOC3; THO complex subunit 3 E T265_15313 hypothetical protein K12881 THOC4; THO complex subunit 4 E T265_09338 hypothetical protein K13174 THOC5; THO complex subunit 5 D TREX-2 complex E T265_00835 hypothetical protein K23801 PCID2; nuclear mRNA export protein PCID2/THP1 E T265_05484 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 E T265_01798 hypothetical protein K11368 ENY2; enhancer of yellow 2 transcription factor E T265_12142 hypothetical protein K11368 ENY2; enhancer of yellow 2 transcription factor E T265_00326 hypothetical protein K11368 ENY2; enhancer of yellow 2 transcription factor E T265_06530 hypothetical protein K16466 CETN3; centrin-3 D Nuclear pore complex E T265_02588 hypothetical protein K09291 TPR; nucleoprotein TPR E T265_11576 hypothetical protein K14298 RAE1; mRNA export factor E T265_13041 hypothetical protein K14004 SEC13; protein transport protein SEC13 E T265_02210 hypothetical protein K14304 NUP85; nuclear pore complex protein Nup85 E T265_05143 hypothetical protein K14305 NUP43; nuclear pore complex protein Nup43 E T265_11394 hypothetical protein K14295 NUP50; nuclear pore complex protein Nup50 E T265_01942 hypothetical protein K14308 NUP54; nuclear pore complex protein Nup54 E T265_10694 hypothetical protein K14306 NUP62; nuclear pore complex protein Nup62 E T265_10110 hypothetical protein K14318 NUP88; nuclear pore complex protein Nup88 E T265_01615 hypothetical protein K14309 NUP93; nuclear pore complex protein Nup93 E T265_03325 hypothetical protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E T265_01809 hypothetical protein K14301 NUP107; nuclear pore complex protein Nup107 E T265_09253 hypothetical protein K14300 NUP133; nuclear pore complex protein Nup133 E T265_13497 hypothetical protein K14311 NUP188; nuclear pore complex protein Nup188 E T265_12676 hypothetical protein K14296 NUP153; nuclear pore complex protein Nup153 E T265_10488 hypothetical protein K14312 NUP155; nuclear pore complex protein Nup155 E T265_05158 hypothetical protein K14313 NUP35; nuclear pore complex protein Nup53 E T265_07599 hypothetical protein K14310 NUP205; nuclear pore complex protein Nup205 E T265_09480 hypothetical protein K14314 NUP210; nuclear pore complex protein Nup210 E T265_11837 hypothetical protein K14317 NUP214; nuclear pore complex protein Nup214 E T265_00163 hypothetical protein K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] E T265_06530 hypothetical protein K16466 CETN3; centrin-3 E T265_03954 hypothetical protein K18723 GLE1; nucleoporin GLE1 E T265_15170 hypothetical protein K14284 NXF; nuclear RNA export factor D Ran-mediated transport factors E T265_14821 hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran E T265_12858 hypothetical protein K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E T265_04418 hypothetical protein K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E T265_05064 hypothetical protein K18726 FAF2; FAS-associated factor 2 E T265_09935 hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase E T265_14337 hypothetical protein K14290 XPO1; exportin-1 E T265_00646 hypothetical protein K18460 XPO7; exportin-7 E T265_08517 hypothetical protein K14319 RANGAP1; Ran GTPase-activating protein 1 D eIF4F and regulatory proteins E T265_01587 hypothetical protein K03259 EIF4E; translation initiation factor 4E E T265_12086 hypothetical protein K03257 EIF4A; translation initiation factor 4A E T265_13782 hypothetical protein K03257 EIF4A; translation initiation factor 4A E T265_06361 hypothetical protein K03260 EIF4G; translation initiation factor 4G E T265_00778 hypothetical protein K03260 EIF4G; translation initiation factor 4G E T265_07299 hypothetical protein K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1 E T265_05797 hypothetical protein K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E T265_15416 hypothetical protein K15516 FMR; fragile X mental retardation protein E T265_12526 hypothetical protein K15516 FMR; fragile X mental retardation protein E T265_10321 hypothetical protein K15516 FMR; fragile X mental retardation protein E T265_13745 hypothetical protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E T265_03929 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E T265_06314 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E T265_01259 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E T265_11931 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E T265_00289 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E T265_05277 hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E T265_08504 hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E T265_10323 hypothetical protein K13126 PABPC; polyadenylate-binding protein E T265_09848 hypothetical protein K07575 MCTS; malignant T-cell-amplified sequence E T265_05507 hypothetical protein K24272 DENR; density-regulated protein D APOBEC1-ACF complex E T265_01555 hypothetical protein K24978 A1CF; APOBEC1 complementation factor D Other transport factors E T265_09918 hypothetical protein K14294 WIBG; partner of Y14 and mago E T265_04579 hypothetical protein K14411 MSI; RNA-binding protein Musashi E T265_12557 hypothetical protein K14411 MSI; RNA-binding protein Musashi E T265_09341 hypothetical protein K14411 MSI; RNA-binding protein Musashi E T265_12486 hypothetical protein K14416 HBS1; elongation factor 1 alpha-like protein E T265_08609 hypothetical protein K06965 PELO; protein pelota E T265_09400 hypothetical protein K14396 PABPN1; polyadenylate-binding protein 2 E T265_01946 hypothetical protein K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E T265_12991 hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1 E T265_15683 hypothetical protein K18732 SARNP; SAP domain-containing ribonucleoprotein E T265_10274 hypothetical protein K11493 RCC1; regulator of chromosome condensation E T265_10576 hypothetical protein K21772 PURA; transcriptional activator protein Pur-alpha E T265_11462 hypothetical protein K21772 PURA; transcriptional activator protein Pur-alpha E T265_07692 hypothetical protein K22414 POLDIP3; polymerase delta-interacting protein 3 E T265_13688 hypothetical protein K23802 LENG8; SAC3 family protein LENG8/THP3 C Surveillance factors D Surveillance complex E T265_06846 hypothetical protein K03265 ETF1; peptide chain release factor subunit 1 E T265_14962 hypothetical protein K03267 ERF3; peptide chain release factor subunit 3 E T265_02354 hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2 E T265_15451 hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3 D Protein phosphatase 2A E T265_12690 hypothetical protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E T265_09555 hypothetical protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E T265_15075 hypothetical protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E T265_10138 hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E T265_10978 hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E T265_01951 hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E T265_03736 hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E T265_05701 hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E T265_06209 hypothetical protein K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E T265_06752 hypothetical protein K11125 SMG5; protein SMG5 E T265_00468 hypothetical protein K11124 SMG6; protein SMG6 [EC:3.1.-.-] E T265_03684 hypothetical protein K14409 SMG7; protein SMG7 E T265_03312 hypothetical protein K18734 SMG8; protein SMG8 E T265_13168 hypothetical protein K18735 SMG9; protein SMG9 E T265_05277 hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E T265_08504 hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E T265_13218 hypothetical protein K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] E T265_13219 hypothetical protein K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] E T265_10927 hypothetical protein K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E T265_04171 hypothetical protein K14844 PUF6; pumilio homology domain family member 6 E T265_13372 hypothetical protein K10357 MYO5; myosin V E T265_08723 hypothetical protein K18739 BICD; protein bicaudal D E T265_00455 hypothetical protein K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 D Factors that have mRNA localization signals D Trans-acting binding proteins E T265_07133 hypothetical protein K03231 EEF1A; elongation factor 1-alpha E T265_15598 hypothetical protein K03233 EEF1G; elongation factor 1-gamma E T265_01280 hypothetical protein K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1 E T265_05290 hypothetical protein K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1 E T265_00068 hypothetical protein K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 E T265_08800 hypothetical protein K17597 STAU; double-stranded RNA-binding protein Staufen E T265_01574 hypothetical protein K13218 PTBP1; polypyrimidine tract-binding protein 1 E T265_11733 hypothetical protein K13218 PTBP1; polypyrimidine tract-binding protein 1 E T265_05632 hypothetical protein K13218 PTBP1; polypyrimidine tract-binding protein 1 E T265_03929 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E T265_06314 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein D Other mRNA localization factors E T265_15416 hypothetical protein K15516 FMR; fragile X mental retardation protein E T265_12526 hypothetical protein K15516 FMR; fragile X mental retardation protein E T265_10321 hypothetical protein K15516 FMR; fragile X mental retardation protein E T265_13745 hypothetical protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E T265_02016 hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4 E T265_14198 hypothetical protein K09276 YBX1; Y-box-binding protein 1 C mRNA cycle factors D Common to processing body (P body) and stress granule E T265_07587 hypothetical protein K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E T265_13773 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C E T265_07377 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C E T265_02735 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C E T265_01587 hypothetical protein K03259 EIF4E; translation initiation factor 4E E T265_01259 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E T265_11931 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E T265_00289 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E T265_11668 hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E T265_00255 hypothetical protein K18749 LSM14; protein LSM14 E T265_07304 hypothetical protein K18749 LSM14; protein LSM14 E T265_02245 hypothetical protein K18749 LSM14; protein LSM14 E T265_14198 hypothetical protein K09276 YBX1; Y-box-binding protein 1 E T265_01193 hypothetical protein K16682 AJUBA; LIM domain-containing protein E T265_07181 hypothetical protein K18752 TNPO1; transportin-1 E T265_06209 hypothetical protein K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E T265_06752 hypothetical protein K11125 SMG5; protein SMG5 E T265_00468 hypothetical protein K11124 SMG6; protein SMG6 [EC:3.1.-.-] E T265_03684 hypothetical protein K14409 SMG7; protein SMG7 E T265_12939 hypothetical protein K18753 ZFP36L; butyrate response factor E T265_04757 hypothetical protein K18754 LIN28; protein lin-28 E T265_14825 hypothetical protein K04345 PKA; protein kinase A [EC:2.7.11.11] E T265_09755 hypothetical protein K04345 PKA; protein kinase A [EC:2.7.11.11] E T265_10587 hypothetical protein K04345 PKA; protein kinase A [EC:2.7.11.11] E T265_06662 hypothetical protein K04345 PKA; protein kinase A [EC:2.7.11.11] E T265_13709 hypothetical protein K04345 PKA; protein kinase A [EC:2.7.11.11] E T265_00362 hypothetical protein K18757 LARP1; la-related protein 1 E T265_01931 hypothetical protein K18757 LARP1; la-related protein 1 E T265_13976 hypothetical protein K18757 LARP1; la-related protein 1 D P-body specific factors E T265_14581 hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E T265_07537 hypothetical protein K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-] E T265_10276 hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E T265_08600 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E T265_07880 hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E T265_14671 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E T265_03585 hypothetical protein K10407 KLC; kinesin light chain E T265_09416 hypothetical protein K10407 KLC; kinesin light chain E T265_11161 hypothetical protein K10407 KLC; kinesin light chain E T265_07619 hypothetical protein K10407 KLC; kinesin light chain E T265_13372 hypothetical protein K10357 MYO5; myosin V E T265_07292 hypothetical protein K07374 TUBA; tubulin alpha E T265_07294 hypothetical protein K07374 TUBA; tubulin alpha E T265_14255 hypothetical protein K07374 TUBA; tubulin alpha E T265_06490 hypothetical protein K07374 TUBA; tubulin alpha E T265_06402 hypothetical protein K07374 TUBA; tubulin alpha E T265_04046 hypothetical protein K07374 TUBA; tubulin alpha E T265_04047 hypothetical protein K07374 TUBA; tubulin alpha E T265_03132 hypothetical protein K07374 TUBA; tubulin alpha E T265_10896 hypothetical protein K07374 TUBA; tubulin alpha E T265_12043 hypothetical protein K07374 TUBA; tubulin alpha E T265_07098 hypothetical protein K07374 TUBA; tubulin alpha E T265_03511 hypothetical protein K07374 TUBA; tubulin alpha E T265_12877 hypothetical protein K07374 TUBA; tubulin alpha E T265_01869 hypothetical protein K07374 TUBA; tubulin alpha E T265_04524 hypothetical protein K07374 TUBA; tubulin alpha E T265_13526 hypothetical protein K07374 TUBA; tubulin alpha E T265_08845 hypothetical protein K07374 TUBA; tubulin alpha E T265_10293 hypothetical protein K07374 TUBA; tubulin alpha E T265_15612 hypothetical protein K07374 TUBA; tubulin alpha E T265_09701 hypothetical protein K07374 TUBA; tubulin alpha E T265_03929 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E T265_06314 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E T265_13477 hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E T265_13104 hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E T265_05843 hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E T265_06276 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E T265_01354 hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E T265_15301 hypothetical protein K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E T265_03848 hypothetical protein K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 E T265_08032 hypothetical protein K14443 TOB; protein Tob/BTG E T265_05797 hypothetical protein K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E T265_04375 hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4 E T265_02354 hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2 E T265_15451 hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3 E T265_05078 hypothetical protein K20102 YTHDF; YTH domain-containing family protein E T265_10186 hypothetical protein K20102 YTHDF; YTH domain-containing family protein D Stress granule specific factors E T265_10323 hypothetical protein K13126 PABPC; polyadenylate-binding protein E T265_08800 hypothetical protein K17597 STAU; double-stranded RNA-binding protein Staufen E T265_15416 hypothetical protein K15516 FMR; fragile X mental retardation protein E T265_12526 hypothetical protein K15516 FMR; fragile X mental retardation protein E T265_10321 hypothetical protein K15516 FMR; fragile X mental retardation protein E T265_08383 hypothetical protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E T265_14200 hypothetical protein K15026 EIF2A; translation initiation factor 2A E T265_05147 hypothetical protein K03253 EIF3B; translation initiation factor 3 subunit B E T265_12086 hypothetical protein K03257 EIF4A; translation initiation factor 4A E T265_13782 hypothetical protein K03257 EIF4A; translation initiation factor 4A E T265_10864 hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E T265_01304 hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E T265_06361 hypothetical protein K03260 EIF4G; translation initiation factor 4G E T265_00778 hypothetical protein K03260 EIF4G; translation initiation factor 4G E T265_09868 hypothetical protein K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] E T265_15275 hypothetical protein K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] E T265_04973 hypothetical protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E T265_03614 hypothetical protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E T265_15170 hypothetical protein K14284 NXF; nuclear RNA export factor B mRNA degradation factors C 5'-3' decay D Decapping complex E T265_07537 hypothetical protein K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-] E T265_14581 hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E T265_11668 hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E T265_04375 hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4 D Lsm complex E T265_10276 hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E T265_08600 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E T265_07880 hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E T265_14671 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 D 5' exonucleases E T265_07587 hypothetical protein K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E T265_11637 hypothetical protein K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64] D Other 5'-3' decay factors E T265_04563 hypothetical protein K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] C 3'-5' decay D Core exosome factors E T265_02634 hypothetical protein K03679 RRP4; exosome complex component RRP4 E T265_00891 hypothetical protein K03681 RRP40; exosome complex component RRP40 E T265_11430 hypothetical protein K11600 RRP41; exosome complex component RRP41 E T265_13360 hypothetical protein K12587 MTR3; exosome complex component MTR3 E T265_07214 hypothetical protein K12589 RRP42; exosome complex component RRP42 E T265_08382 hypothetical protein K03678 RRP45; exosome complex component RRP45 D Exosome cofactors E T265_01106 hypothetical protein K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-] E T265_03970 hypothetical protein K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E T265_13865 hypothetical protein K12592 C1D; exosome complex protein LRP1 D TRAMP complex E T265_14168 hypothetical protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E T265_10544 hypothetical protein K12597 AIR1_2; protein AIR1/2 E T265_06266 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] E T265_15315 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E T265_14327 hypothetical protein K12602 WDR61; WD repeat-containing protein 61 D Ccr4-NOT complex E T265_06276 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E T265_13477 hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E T265_13104 hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E T265_05843 hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E T265_01354 hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E T265_09287 hypothetical protein K12606 RCD1; CCR4-NOT transcription complex subunit 9 E T265_07644 hypothetical protein K12606 RCD1; CCR4-NOT transcription complex subunit 9 E T265_05615 hypothetical protein K12607 CNOT10; CCR4-NOT transcription complex subunit 10 D Pan complex E T265_15301 hypothetical protein K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E T265_03848 hypothetical protein K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D Other 3'-5' decay factors E T265_01921 hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E T265_08032 hypothetical protein K14443 TOB; protein Tob/BTG E T265_04013 hypothetical protein K18764 NOCT; nocturnin [EC:3.1.3.108] E T265_14105 hypothetical protein K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] E T265_01488 hypothetical protein K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] E T265_04563 hypothetical protein K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E T265_14178 hypothetical protein K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E T265_13543 hypothetical protein K26109 NRDE2; nuclear exosome regulator NRDE2 C Other degradation factors D RNases E T265_10184 hypothetical protein K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E T265_11305 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D Helicases D Other RNA degradosome components E T265_10327 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E T265_03262 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E T265_06027 hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E T265_07011 hypothetical protein K04043 dnaK; molecular chaperone DnaK E T265_07438 hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E T265_02634 hypothetical protein K03679 RRP4; exosome complex component RRP4 D Cofactors E T265_11430 hypothetical protein K11600 RRP41; exosome complex component RRP41 E T265_07214 hypothetical protein K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024