+D
#
Spliceosome - Opisthorchis viverrini (Southeast Asian liver fluke)
%
!
ACommon components
B Common spliceosomal components
C Cap binding complex
D T265_10968 hypothetical protein K12882 NCBP1; nuclear cap-binding protein subunit 1
D T265_11300 hypothetical protein K12883 NCBP2; nuclear cap-binding protein subunit 2
C hnRNP proteins
D T265_12920 hypothetical protein K12886 HNRNPK; heterogeneous nuclear ribonucleoprotein K
D T265_10677 hypothetical protein K12886 HNRNPK; heterogeneous nuclear ribonucleoprotein K
C SR proteins
D T265_01927 hypothetical protein K12890 SRSF1; serine/arginine-rich splicing factor 1
D T265_04787 hypothetical protein K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D T265_00497 hypothetical protein K12896 SRSF7; serine/arginine-rich splicing factor 7
D T265_06215 hypothetical protein K12897 TRA2; transformer-2 protein
D T265_07370 hypothetical protein K12897 TRA2; transformer-2 protein
C General mRNP proteins
D T265_03594 hypothetical protein K13089 ILF2; interleukin enhancer-binding factor 2
D T265_06836 hypothetical protein K13091 RBM23_39; RNA-binding protein 23/39
D T265_14198 hypothetical protein K09276 YBX1; Y-box-binding protein 1
#
AComplex A
B U1 snRNP components
C Sm proteins
D T265_07357 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D T265_06282 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D T265_09278 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D T265_05809 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D T265_07341 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
C U1 snRNP specific factors
D T265_00504 hypothetical protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D T265_10482 hypothetical protein K11091 SNRPA; U1 small nuclear ribonucleoprotein A
D T265_01556 hypothetical protein K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D T265_10560 hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D T265_14346 hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
D T265_08601 hypothetical protein K12822 RBM25; RNA-binding protein 25
D T265_15534 hypothetical protein K12824 TCERG1; transcription elongation regulator 1
B U2 snRNP components
C Sm proteins
D T265_07357 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D T265_06282 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D T265_09278 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D T265_05809 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D T265_07341 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
C U2 snRNP specific factors
D T265_08572 hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D T265_06228 hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D T265_06230 hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D T265_10389 hypothetical protein K12826 SF3A2; splicing factor 3A subunit 2
D T265_05682 hypothetical protein K12827 SF3A3; splicing factor 3A subunit 3
D T265_11882 hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D T265_01022 hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D T265_11823 hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D T265_03828 hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D T265_04319 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D T265_07581 hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
D T265_11802 hypothetical protein K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
C U2 related factors
D T265_06653 hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D T265_06433 hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D T265_05335 hypothetical protein K12841 CHERP; calcium homeostasis endoplasmic reticulum protein
D T265_12857 hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D T265_14961 hypothetical protein K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D T265_11398 hypothetical protein K12838 PUF60; poly(U)-binding-splicing factor PUF60
D T265_07497 hypothetical protein K12838 PUF60; poly(U)-binding-splicing factor PUF60
D T265_02973 hypothetical protein K12840 RBM17; splicing factor 45
D T265_03201 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D T265_14589 hypothetical protein K12842 SR140; U2-associated protein SR140
B Other components
C Complex A specific factors
D T265_04491 hypothetical protein K02180 BUB3; cell cycle arrest protein BUB3
D T265_15342 hypothetical protein K08818 CDC2L; cell division cycle 2-like [EC:2.7.11.22]
D T265_09428 hypothetical protein K13093 HTATSF1; HIV Tat-specific factor 1
D T265_13784 hypothetical protein K13094 RBM5_10; RNA-binding protein 5/10
D T265_06824 hypothetical protein K13095 SF1; splicing factor 1
D T265_14223 hypothetical protein K13098 TLS; RNA-binding protein FUS
#
AComplex B
B U1 snRNP components
C Sm proteins
D T265_07357 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D T265_06282 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D T265_09278 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D T265_05809 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D T265_07341 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
C U1 snRNP specific factors
D T265_00504 hypothetical protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D T265_10482 hypothetical protein K11091 SNRPA; U1 small nuclear ribonucleoprotein A
D T265_01556 hypothetical protein K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D T265_10560 hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D T265_14346 hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
D T265_08601 hypothetical protein K12822 RBM25; RNA-binding protein 25
D T265_15534 hypothetical protein K12824 TCERG1; transcription elongation regulator 1
B U2 snRNP components
C Sm proteins
D T265_07357 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D T265_06282 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D T265_09278 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D T265_05809 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D T265_07341 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
C U2 snRNP specific factors
D T265_08572 hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D T265_06228 hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D T265_06230 hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D T265_10389 hypothetical protein K12826 SF3A2; splicing factor 3A subunit 2
D T265_05682 hypothetical protein K12827 SF3A3; splicing factor 3A subunit 3
D T265_11882 hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D T265_01022 hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D T265_11823 hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D T265_03828 hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D T265_04319 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D T265_07581 hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
D T265_11802 hypothetical protein K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
C U2 related factors
D T265_06653 hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D T265_06433 hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D T265_05335 hypothetical protein K12841 CHERP; calcium homeostasis endoplasmic reticulum protein
D T265_12857 hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D T265_14961 hypothetical protein K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D T265_11398 hypothetical protein K12838 PUF60; poly(U)-binding-splicing factor PUF60
D T265_07497 hypothetical protein K12838 PUF60; poly(U)-binding-splicing factor PUF60
D T265_02973 hypothetical protein K12840 RBM17; splicing factor 45
D T265_03201 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D T265_14589 hypothetical protein K12842 SR140; U2-associated protein SR140
B U4/U6.U5 tri-snRNP components
C Sm proteins
D T265_07357 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D T265_06282 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D T265_09278 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D T265_05809 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D T265_07341 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
C LSm proteins
D T265_08600 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
D T265_07880 hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
D T265_14671 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
C U4/U6 snRNP specific factors
D T265_08740 hypothetical protein K12843 PRPF3; U4/U6 small nuclear ribonucleoprotein PRP3
D T265_10890 hypothetical protein K12662 PRPF4; U4/U6 small nuclear ribonucleoprotein PRP4
D T265_05583 hypothetical protein K09567 PPIH; peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]
D T265_07598 hypothetical protein K12844 PRPF31; U4/U6 small nuclear ribonucleoprotein PRP31
D T265_10578 hypothetical protein K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
D T265_04172 hypothetical protein K22611 SART3; squamous cell carcinoma antigen recognized by T-cells 3
C U5 snRNP specific factors
D T265_09689 hypothetical protein K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D T265_05545 hypothetical protein K12855 PRPF6; pre-mRNA-processing factor 6
D T265_14392 hypothetical protein K12856 PRPF8; pre-mRNA-processing factor 8
D T265_11847 hypothetical protein K12857 SNRNP40; Prp8 binding protein
D T265_03368 hypothetical protein K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
D T265_02055 hypothetical protein K12859 TXNL4A; U5 snRNP protein, DIM1 family
D T265_16063 hypothetical protein K13099 CD2BP2; CD2 antigen cytoplasmic tail-binding protein 2
D T265_01437 hypothetical protein K13099 CD2BP2; CD2 antigen cytoplasmic tail-binding protein 2
C U4/U6.U5 tri-snRNP specific factors
D T265_11303 hypothetical protein K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
D T265_09870 hypothetical protein K12847 USP39; U4/U6.U5 tri-snRNP-associated protein 2
C U4/U6.U5 tri-snRNP related factors
D T265_14749 hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A
D T265_03536 hypothetical protein K12850 PRPF38B; pre-mRNA-splicing factor 38B
D T265_07501 hypothetical protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D T265_14685 hypothetical protein K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D T265_14733 hypothetical protein K13101 GPKOW; G patch domain and KOW motifs-containing protein
D T265_06266 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D T265_15315 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D T265_04950 hypothetical protein K13104 ZNF830; zinc finger protein 830
B Other components
C Prp19 complex
D T265_07048 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D T265_12990 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D T265_13431 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D T265_07849 hypothetical protein K12862 PLRG1; pleiotropic regulator 1
D T265_07037 hypothetical protein K12863 CWC15; protein CWC15
D T265_03803 hypothetical protein K12864 CTNNBL1; beta-catenin-like protein 1
D T265_01251 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D T265_06061 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D T265_06063 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D T265_06064 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D T265_06066 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D T265_15703 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D T265_09249 hypothetical protein K12865 PQBP1; polyglutamine-binding protein 1
D T265_08033 hypothetical protein K12866 WBP11; WW domain-binding protein 11
C Prp19-related factors
D T265_13448 hypothetical protein K06063 SNW1; SNW domain-containing protein 1
D T265_12991 hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1
D T265_01635 hypothetical protein K12868 SYF2; pre-mRNA-splicing factor SYF2
D T265_00300 hypothetical protein K12869 CRN; crooked neck
D T265_05901 hypothetical protein K12874 AQR; intron-binding protein aquarius
D T265_01996 hypothetical protein K12873 BUD31; bud site selection protein 31
D T265_11492 hypothetical protein K12871 CCDC12; coiled-coil domain-containing protein 12
D T265_00711 hypothetical protein K12870 ISY1; pre-mRNA-splicing factor ISY1
D T265_06288 hypothetical protein K09564 PPIE; peptidyl-prolyl isomerase E (cyclophilin E) [EC:5.2.1.8]
D T265_07785 hypothetical protein K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D T265_15074 hypothetical protein K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
C RES complex
D T265_11765 hypothetical protein K13106 BUD13; pre-mRNA-splicing factor CWC26
D T265_09042 hypothetical protein K13107 RBMX2; RNA-binding motif protein, X-linked 2
D T265_00681 hypothetical protein K13108 SNIP1; smad nuclear-interacting protein 1
C Complex B specific factors
D T265_14986 hypothetical protein K13109 IK; IK cytokine
D T265_01896 hypothetical protein K13110 MFAP1; microfibrillar-associated protein 1
D T265_01466 hypothetical protein K13111 SMU1; WD40 repeat-containing protein SMU1
D T265_11665 hypothetical protein K13113 UBL5; ubiquitin-like protein 5
#
AComplex C
B U2 snRNP components
C Sm proteins
D T265_07357 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D T265_06282 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D T265_09278 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D T265_05809 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D T265_07341 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
C LSm proteins
D T265_08600 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
C U2 SnRNP specific factors
D T265_08572 hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D T265_06228 hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D T265_06230 hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D T265_10389 hypothetical protein K12826 SF3A2; splicing factor 3A subunit 2
D T265_05682 hypothetical protein K12827 SF3A3; splicing factor 3A subunit 3
D T265_11882 hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D T265_01022 hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D T265_11823 hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D T265_03828 hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D T265_04319 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D T265_07581 hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
D T265_11802 hypothetical protein K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
B U4/U6.U5 tri-snRNP components
C Sm proteins
D T265_07357 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D T265_06282 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D T265_09278 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D T265_05809 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D T265_07341 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
C U5 SnRNP specific factors
D T265_09689 hypothetical protein K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D T265_05545 hypothetical protein K12855 PRPF6; pre-mRNA-processing factor 6
D T265_14392 hypothetical protein K12856 PRPF8; pre-mRNA-processing factor 8
D T265_11847 hypothetical protein K12857 SNRNP40; Prp8 binding protein
D T265_03368 hypothetical protein K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
C U4/U6.U5 tri-SnRNP specific factors
D T265_11303 hypothetical protein K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
C U4/U6.U5 tri-SnRNP related factors
D T265_14749 hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A
D T265_03536 hypothetical protein K12850 PRPF38B; pre-mRNA-splicing factor 38B
D T265_07501 hypothetical protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D T265_14685 hypothetical protein K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D T265_14733 hypothetical protein K13101 GPKOW; G patch domain and KOW motifs-containing protein
D T265_06266 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D T265_15315 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D T265_04950 hypothetical protein K13104 ZNF830; zinc finger protein 830
D T265_12857 hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D T265_00764 hypothetical protein K13103 TFIP11; tuftelin-interacting protein 11
B Other components
C Prp19-CDC5 complex
D T265_07048 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D T265_12990 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D T265_13431 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D T265_03803 hypothetical protein K12864 CTNNBL1; beta-catenin-like protein 1
D T265_07037 hypothetical protein K12863 CWC15; protein CWC15
D T265_07849 hypothetical protein K12862 PLRG1; pleiotropic regulator 1
D T265_01251 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D T265_06061 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D T265_06063 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D T265_06064 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D T265_06066 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D T265_15703 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Prp19-related factors
D T265_13448 hypothetical protein K06063 SNW1; SNW domain-containing protein 1
D T265_12991 hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1
D T265_01635 hypothetical protein K12868 SYF2; pre-mRNA-splicing factor SYF2
D T265_00300 hypothetical protein K12869 CRN; crooked neck
D T265_05901 hypothetical protein K12874 AQR; intron-binding protein aquarius
D T265_01996 hypothetical protein K12873 BUD31; bud site selection protein 31
D T265_11492 hypothetical protein K12871 CCDC12; coiled-coil domain-containing protein 12
D T265_00711 hypothetical protein K12870 ISY1; pre-mRNA-splicing factor ISY1
D T265_07785 hypothetical protein K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D T265_06288 hypothetical protein K09564 PPIE; peptidyl-prolyl isomerase E (cyclophilin E) [EC:5.2.1.8]
D T265_15074 hypothetical protein K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
C RES complex
D T265_11765 hypothetical protein K13106 BUD13; pre-mRNA-splicing factor CWC26
D T265_09042 hypothetical protein K13107 RBMX2; RNA-binding motif protein, X-linked 2
D T265_00681 hypothetical protein K13108 SNIP1; smad nuclear-interacting protein 1
C EJC/TREX
D T265_04671 hypothetical protein K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
D T265_06949 hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
D T265_10864 hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
D T265_01304 hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
D T265_02310 hypothetical protein K25178 CCDC174; coiled-coil domain-containing protein 174
D T265_11153 hypothetical protein K12877 MAGOH; protein mago nashi
D T265_03246 hypothetical protein K13114 PNN; pinin
D T265_01122 hypothetical protein K12876 RBM8A; RNA-binding protein 8A
D T265_15203 hypothetical protein K12880 THOC3; THO complex subunit 3
D T265_15313 hypothetical protein K12881 THOC4; THO complex subunit 4
C Step II factors
D T265_08698 hypothetical protein K12816 CDC40; pre-mRNA-processing factor 17
D T265_11508 hypothetical protein K12817 PRPF18; pre-mRNA-splicing factor 18
D T265_08719 hypothetical protein K12819 SLU7; pre-mRNA-processing factor SLU7
D T265_14212 hypothetical protein K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
D T265_12762 hypothetical protein K12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
C PPlases
D T265_07870 hypothetical protein K12735 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]
D T265_02578 hypothetical protein K09566 PPIG; peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8]
D T265_06833 hypothetical protein K12736 PPWD1; peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]
D T265_06903 hypothetical protein K12737 SDCCAG10; peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:5.2.1.8]
C hnRNP proteins
D T265_10364 hypothetical protein K12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F/H
D T265_10181 hypothetical protein K12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F/H
C Complex C specific factors
D T265_12816 hypothetical protein K13116 DDX41; ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
D T265_06510 hypothetical protein K13117 DHX35; ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
D T265_00342 hypothetical protein K13118 DGCR14; protein DGCR14
D T265_08086 hypothetical protein K13119 FAM50; protein FAM50
D T265_07286 hypothetical protein K13120 FAM32A; protein FAM32A
D T265_13643 hypothetical protein K13121 FRA10AC1; protein FRA10AC1
D T265_01462 hypothetical protein K13122 FRG1; protein FRG1
D T265_03497 hypothetical protein K13123 GPATCH1; G patch domain-containing protein 1
D T265_10323 hypothetical protein K13126 PABPC; polyadenylate-binding protein
D T265_00764 hypothetical protein K13103 TFIP11; tuftelin-interacting protein 11
D T265_14290 hypothetical protein K13128 ZCCHC8; zinc finger CCHC domain-containing protein 8
D T265_01331 hypothetical protein K25058 CACTIN; cactin
D T265_04262 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
D T265_07019 hypothetical protein K26159 PRKRIP1; PRKR-interacting protein 1
#
AOther splicing related proteins
B Proteins involved in snRNP biogenesis
C SMN complex factors
D T265_00797 hypothetical protein K13130 GEMIN2; gem associated protein 2
D T265_07639 hypothetical protein K13131 DDX20; ATP-dependent RNA helicase DDX20 [EC:5.6.2.7]
D T265_07989 hypothetical protein K13134 GEMIN6; gem associated protein 6
D T265_01015 hypothetical protein K13137 STRAP; serine-threonine kinase receptor-associated protein
C Integrator complex
D T265_03337 hypothetical protein K13138 INTS1; integrator complex subunit 1
D T265_10692 hypothetical protein K13139 INTS2; integrator complex subunit 2
D T265_14119 hypothetical protein K13140 INTS3; integrator complex subunit 3
D T265_02621 hypothetical protein K13141 INTS4; integrator complex subunit 4
D T265_12170 hypothetical protein K13143 INTS6; integrator complex subunit 6
D T265_06509 hypothetical protein K13143 INTS6; integrator complex subunit 6
D T265_10026 hypothetical protein K13144 INTS7; integrator complex subunit 7
D T265_08429 hypothetical protein K13146 INTS9; integrator complex subunit 9
D T265_12913 hypothetical protein K13148 CPSF3L; integrator complex subunit 11 [EC:3.1.27.-]
C Other proteins involved in snRNP biogenesis
D T265_03201 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D T265_00530 hypothetical protein K13151 SNUPN; snurportin-1
D T265_02218 hypothetical protein K23093 USB1; U6 snRNA phosphodiesterase [EC:3.1.4.-]
D T265_12668 hypothetical protein K05019 CLNS1A; chloride channel, nucleotide-sensitive, 1A
D T265_05884 hypothetical protein K14292 TGS1; trimethylguanosine synthase [EC:2.1.1.-]
D T265_06105 hypothetical protein K14292 TGS1; trimethylguanosine synthase [EC:2.1.1.-]
D T265_04867 hypothetical protein K06874 ZPR1; zinc finger protein ZPR1
B Minor spliceosome components
C Minor spliceosome specific factors
D T265_08689 hypothetical protein K13153 SNRNP25; U11/U12 small nuclear ribonucleoprotein 25 kDa protein
D T265_10175 hypothetical protein K13154 ZCRB1; U11/U12 small nuclear ribonucleoprotein 31 kDa protein
D T265_10171 hypothetical protein K13157 RNPC3; U11/U12 small nuclear ribonucleoprotein 65 kDa protein
C Minor spliceosome associated proteins
D T265_07169 hypothetical protein K24826 CRIPT; cysteine-rich PDZ-binding protein
B Spliceosome associated proteins (SAPs)
C hnRNP proteins
D T265_01280 hypothetical protein K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
D T265_05290 hypothetical protein K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
D T265_04488 hypothetical protein K13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L
D T265_09986 hypothetical protein K13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L
D T265_04980 hypothetical protein K13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L
D T265_04982 hypothetical protein K13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L
C SR proteins
D T265_06467 hypothetical protein K13165 SREK1; splicing regulatory glutamine/lysine-rich protein 1
D T265_08700 hypothetical protein K13168 CLASRP; CLK4-associating serine/arginine rich protein
D T265_00580 hypothetical protein K13169 AKAP17; A-kinase anchor protein 17
C SR-related proteins
D T265_15216 hypothetical protein K13172 SRRM2; serine/arginine repetitive matrix protein 2
D T265_11252 hypothetical protein K13172 SRRM2; serine/arginine repetitive matrix protein 2
D T265_13770 hypothetical protein K13173 ARGLU1; arginine and glutamate-rich protein 1
D T265_10165 hypothetical protein K13173 ARGLU1; arginine and glutamate-rich protein 1
C TREX complex
D T265_15203 hypothetical protein K12880 THOC3; THO complex subunit 3
D T265_15313 hypothetical protein K12881 THOC4; THO complex subunit 4
D T265_09338 hypothetical protein K13174 THOC5; THO complex subunit 5
D T265_06949 hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
C RNA helicase-like proteins
D T265_14667 hypothetical protein K13177 DDX1; ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]
D T265_01259 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D T265_11931 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D T265_00289 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D T265_02708 hypothetical protein K13178 DDX17; ATP-dependent RNA helicase DDX17 [EC:5.6.2.7]
D T265_13481 hypothetical protein K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D T265_05101 hypothetical protein K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D T265_03216 hypothetical protein K13183 DDX50; ATP-dependent RNA helicase DDX50 [EC:5.6.2.7]
D T265_09022 hypothetical protein K13184 DHX9; ATP-dependent RNA/DNA helicase DHX9 [EC:5.6.2.6 5.6.2.4]
C RNA binding proteins (RBPs)
D T265_02244 hypothetical protein K24526 RBM12; RNA-binding protein 12
D T265_00168 hypothetical protein K13190 RBM15; RNA-binding protein 15
D T265_00186 hypothetical protein K13190 RBM15; RNA-binding protein 15
D T265_02607 hypothetical protein K13193 RBM27; RNA-binding protein 27
D T265_06248 hypothetical protein K06099 CSDA; cold shock domain protein A
D T265_13279 hypothetical protein K13196 DPF2; zinc finger protein ubi-d4
D T265_06220 hypothetical protein K17843 KHDRBS2; KH domain-containing, RNA-binding, signal transduction-associated protein 2
D T265_00417 hypothetical protein K14944 NOVA; RNA-binding protein Nova
D T265_14663 hypothetical protein K14945 QKI; protein quaking
D T265_07358 hypothetical protein K14945 QKI; protein quaking
D T265_05959 hypothetical protein K14946 RBFOX; RNA binding protein fox-1
D T265_06888 hypothetical protein K14946 RBFOX; RNA binding protein fox-1
D T265_07384 hypothetical protein K13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein
D T265_04400 hypothetical protein K13203 ZFR; zinc finger RNA-binding protein
D T265_04383 hypothetical protein K20100 YTHDC1; YTH domain-containing protein 1
C Other SAPs
D T265_15369 hypothetical protein K13205 AAR2; A1 cistron-splicing factor AAR2
D T265_05862 hypothetical protein K13206 CCDC55; coiled-coil domain-containing protein 55
D T265_07764 hypothetical protein K08823 CLK2_3; dual specificity protein kinase CLK2/3 [EC:2.7.12.1]
D T265_04838 hypothetical protein K08823 CLK2_3; dual specificity protein kinase CLK2/3 [EC:2.7.12.1]
D T265_00384 hypothetical protein K13207 CUGBP; CUG-BP- and ETR3-like factor
D T265_04712 hypothetical protein K13207 CUGBP; CUG-BP- and ETR3-like factor
D T265_05227 hypothetical protein K13207 CUGBP; CUG-BP- and ETR3-like factor
D T265_15092 hypothetical protein K09528 DNAJC8; DnaJ homolog subfamily C member 8
D T265_08963 hypothetical protein K09533 DNAJC13; DnaJ homolog subfamily C member 13
D T265_08964 hypothetical protein K09533 DNAJC13; DnaJ homolog subfamily C member 13
D T265_12858 hypothetical protein K13208 ELAVL2_3_4; ELAV like protein 2/3/4
D T265_04418 hypothetical protein K13208 ELAVL2_3_4; ELAV like protein 2/3/4
D T265_08264 hypothetical protein K14947 ESRP1_2; epithelial splicing regulatory protein 1/2
D T265_00251 hypothetical protein K14947 ESRP1_2; epithelial splicing regulatory protein 1/2
D T265_08525 hypothetical protein K13211 GCFC; GC-rich sequence DNA-binding factor
D T265_10243 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_15333 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_08568 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_15800 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_00446 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_12540 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_02881 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_03762 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_13111 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_13657 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_05025 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_10500 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D T265_06958 hypothetical protein K13216 PPP1R8; nuclear inhibitor of protein phosphatase 1 [EC:3.1.4.-]
D T265_08688 hypothetical protein K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320]
D T265_15093 hypothetical protein K08827 PRPF4B; serine/threonine-protein kinase PRP4 [EC:2.7.11.1]
D T265_07844 hypothetical protein K13217 PRPF39; pre-mRNA-processing factor 39
D T265_01574 hypothetical protein K13218 PTBP1; polypyrimidine tract-binding protein 1
D T265_11733 hypothetical protein K13218 PTBP1; polypyrimidine tract-binding protein 1
D T265_05632 hypothetical protein K13218 PTBP1; polypyrimidine tract-binding protein 1
D T265_05953 hypothetical protein K08831 SRPK2; serine/threonine-protein kinase SRPK2 [EC:2.7.11.1]
D T265_14467 hypothetical protein K13220 WBP4; WW domain-binding protein 4
D T265_02288 hypothetical protein K23966 CCNL; cyclin L
D T265_03278 hypothetical protein K24939 CWF19L1; CWF19-like protein 1
D T265_05782 hypothetical protein K24940 CWF19L2; CWF19-like protein 2
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ASplicing related RNAs
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 15, 2024