+D GENES KO
#
KEGG Orthology (KO) - Pyrodictium abyssi
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pabi00010]
D PABY_06850 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D PABY_20990 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D PABY_20980 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PABY_16690 phosphorylating glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D PABY_16700 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PABY_09860 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PABY_16410 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PABY_09130 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PABY_07530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PABY_00150 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_14120 pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_00140 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14130 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14100 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PABY_00170 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PABY_00160 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_14110 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_17110 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PABY_17120 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PABY_22110 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PABY_00920 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PABY_19180 acetate--CoA ligase family protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PABY_04660 acetate--CoA ligase family protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PABY_07830 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PABY_02940 aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6]
C 00020 Citrate cycle (TCA cycle) [PATH:pabi00020]
D PABY_15330 hypothetical protein K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D PABY_15300 isocitrate/isopropylmalate dehydrogenase family protein K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D PABY_07530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PABY_17110 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PABY_17120 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PABY_06670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PABY_06660 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PABY_23050 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PABY_23020 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PABY_23040 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PABY_23030 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PABY_23070 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PABY_23060 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PABY_00150 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_14120 pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_00140 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14130 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14100 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PABY_00170 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PABY_00160 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_14110 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:pabi00030]
D PABY_06850 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D PABY_07580 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PABY_07590 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PABY_07970 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PABY_09420 hxlB; 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D PABY_04390 hxlA; 3-hexulose-6-phosphate synthase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27]
D PABY_16900 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PABY_10350 carbohydrate kinase family protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D PABY_07830 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PABY_18100 ribose 1,5-bisphosphate isomerase K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29]
D PABY_18110 ribose 1,5-bisphosphate isomerase K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29]
D PABY_00310 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PABY_20870 SDR family oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D PABY_00410 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D PABY_13990 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D PABY_18970 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D PABY_00530 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PABY_20990 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:pabi00040]
D PABY_05390 hypothetical protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D PABY_11790 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:pabi00051]
D PABY_06850 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D PABY_07830 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PABY_19400 hypothetical protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PABY_11790 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D PABY_13290 hypothetical protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D PABY_00960 mpgS; mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
D PABY_00950 mpgP; mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D PABY_20990 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D PABY_20980 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:pabi00052]
D PABY_19340 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PABY_07830 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:pabi00500]
D PABY_07830 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PABY_06850 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pabi00520]
D PABY_16940 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PABY_18660 spn; bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D PABY_07830 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PABY_19340 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PABY_06850 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D PABY_19400 hypothetical protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:pabi00620]
D PABY_00920 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PABY_00150 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_14120 pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_00140 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14130 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14100 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PABY_00170 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PABY_00160 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_14110 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_17110 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PABY_17120 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PABY_07530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PABY_22110 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PABY_10840 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PABY_14190 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PABY_19180 acetate--CoA ligase family protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PABY_04660 acetate--CoA ligase family protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PABY_22970 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PABY_23070 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PABY_23060 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PABY_20680 ppcA; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PABY_09130 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_04710 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PABY_19090 lysS_2; homocitrate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PABY_22900 homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pabi00630]
D PABY_00920 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_10550 glcD; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D PABY_15900 gyaR; glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D PABY_19780 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PABY_14860 phosphoglycolate phosphatase K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18]
D PABY_14840 rbcL; type III ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D PABY_09880 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PABY_09290 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PABY_10380 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PABY_10370 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PABY_15540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PABY_07530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PABY_14440 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PABY_00530 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:pabi00640]
D PABY_00920 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PABY_19180 acetate--CoA ligase family protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PABY_04660 acetate--CoA ligase family protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PABY_07530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PABY_00150 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_14120 pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_00140 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14130 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14100 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PABY_00170 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PABY_00160 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_14110 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_10840 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PABY_16040 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PABY_06660 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PABY_06670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:pabi00650]
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_10830 hypothetical protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PABY_06050 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D PABY_06040 CoA-transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D PABY_06760 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D PABY_23050 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PABY_23020 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PABY_23040 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PABY_23030 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PABY_16040 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PABY_00150 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_14120 pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_00140 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14130 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14100 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PABY_00170 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PABY_00160 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_14110 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_17110 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PABY_17120 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PABY_23930 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PABY_22920 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PABY_22930 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pabi00660]
D PABY_22920 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PABY_22930 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PABY_06660 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PABY_06670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PABY_15320 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PABY_22880 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PABY_15310 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PABY_22960 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PABY_22890 isocitrate/isopropylmalate dehydrogenase family protein K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pabi00562]
D PABY_11840 extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PABY_18190 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D PABY_04620 hypothetical protein K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34]
D PABY_04630 hypothetical protein K07291 dipps; CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.8.34]
D PABY_20980 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pabi00190]
D PABY_14460 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PABY_14470 nuoB; NADH-quinone oxidoreductase subunit NuoB K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PABY_14480 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PABY_15180 hypothetical protein K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PABY_14490 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PABY_14500 nuoH_1; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PABY_15250 nuoH_2; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PABY_14510 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PABY_14520 hypothetical protein K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PABY_14530 hypothetical protein K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PABY_15230 hypothetical protein K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PABY_14550 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PABY_15220 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PABY_14540 complex I subunit 5 family protein K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PABY_15200 hypothetical protein K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PABY_14560 fpoN; F(420)H(2) dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PABY_15210 hypothetical protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PABY_00480 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PABY_23050 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PABY_23020 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PABY_23040 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PABY_23030 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PABY_09810 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PABY_11280 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PABY_11390 ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D PABY_12250 ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D PABY_11400 ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D PABY_12240 ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D PABY_11410 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D PABY_12230 hypothetical protein K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D PABY_11380 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D PABY_12260 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D PABY_11370 hypothetical protein K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D PABY_12270 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D PABY_11360 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D PABY_12280 V-type ATPase 116kDa subunit family protein K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D PABY_11430 hypothetical protein K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D PABY_12210 hypothetical protein K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D PABY_15980 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pabi00710]
D PABY_14840 rbcL; type III ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D PABY_16700 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PABY_16690 phosphorylating glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D PABY_07580 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PABY_07590 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PABY_07970 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PABY_20980 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PABY_20680 ppcA; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:pabi00720]
D PABY_00150 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_14120 pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_00140 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14130 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14100 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PABY_00170 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PABY_00160 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_14110 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_09130 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PABY_20680 ppcA; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PABY_23070 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PABY_23060 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PABY_23050 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PABY_23020 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PABY_23040 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PABY_23030 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PABY_06670 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PABY_06660 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PABY_06060 acetate--CoA ligase K14467 4hbl; 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40]
D PABY_01480 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K15016 K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35]
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_17110 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PABY_17120 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PABY_10840 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PABY_00920 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:pabi00680]
D PABY_09290 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PABY_00530 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PABY_16410 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PABY_20680 ppcA; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PABY_20990 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D PABY_09420 hxlB; 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D PABY_04390 hxlA; 3-hexulose-6-phosphate synthase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27]
D PABY_11740 Ni/Fe hydrogenase subunit alpha K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5]
D PABY_11730 methyl viologen-reducing hydrogenase K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5]
D PABY_00920 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PABY_00150 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_14120 pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_00140 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14130 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14100 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PABY_00170 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PABY_00160 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_14110 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_09130 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PABY_09860 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PABY_15400 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PABY_22410 HAD-IB family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PABY_14200 mfnA; tyrosine decarboxylase MfnA K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00910 Nitrogen metabolism [PATH:pabi00910]
D PABY_10170 hypothetical protein K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D PABY_11820 cbb3-type cytochrome c oxidase subunit I K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D PABY_00610 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D PABY_15910 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PABY_09880 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PABY_18200 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PABY_17970 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:pabi00920]
D PABY_00800 hypothetical protein K15551 tauA; taurine transport system substrate-binding protein
D PABY_00780 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PABY_06680 hypothetical protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PABY_23650 FAD/NAD(P)-binding oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D PABY_07290 nrfD_3; polysulfide reductase NrfD K17221 sreC; sulfur reductase membrane anchor
D PABY_05110 pyridoxal-phosphate dependent enzyme K10150 cysO; cysteine synthase / O-phosphoserine sulfhydrylase / cystathionine beta-synthase [EC:2.5.1.47 2.5.1.65 4.2.1.22]
D PABY_04210 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PABY_20700 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pabi00061]
D PABY_10840 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PABY_01180 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PABY_02490 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PABY_12150 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PABY_01530 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_22820 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_22840 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pabi00071]
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_01530 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_22820 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_22840 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_22110 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism
D PABY_00530 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
C 00564 Glycerophospholipid metabolism [PATH:pabi00564]
D PABY_15290 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PABY_24600 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PABY_12060 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PABY_01740 NAD(P)-dependent glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D PABY_03020 geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41]
D PABY_03200 UbiA family prenyltransferase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42]
D PABY_02600 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pabi00230]
D PABY_06600 hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PABY_14230 hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PABY_07830 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PABY_00310 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PABY_13760 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PABY_13770 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PABY_13750 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PABY_13740 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PABY_13780 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PABY_13800 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D PABY_13790 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PABY_13620 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PABY_06290 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PABY_13810 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PABY_05330 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PABY_04650 formate--phosphoribosylaminoimidazolecarboxamideligase family protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23]
D PABY_24630 formate--phosphoribosylaminoimidazolecarboxamideligase K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23]
D PABY_13050 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PABY_13400 hypothetical protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PABY_07810 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PABY_22130 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PABY_20400 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PABY_21720 yjjX; inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D PABY_21940 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PABY_22120 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PABY_07770 hypothetical protein K26212 K26212; guanosine phosphorylase [EC:2.4.2.15]
D PABY_15820 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PABY_04510 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PABY_06650 cyaB; class IV adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D PABY_05350 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PABY_20650 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57]
D PABY_08540 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PABY_21060 adenylate kinase family protein K18532 AK6; adenylate kinase [EC:2.7.4.3]
D PABY_16310 NTPase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D PABY_16990 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D PABY_17970 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:pabi00240]
D PABY_00980 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PABY_19470 hypothetical protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PABY_00990 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PABY_04180 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PABY_04170 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PABY_04150 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PABY_06620 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D PABY_04160 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D PABY_04190 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PABY_04200 hypothetical protein K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PABY_18620 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PABY_20400 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PABY_04220 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PABY_08510 AAA family ATPase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PABY_07810 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PABY_03910 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D PABY_19020 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PABY_20650 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57]
D PABY_15510 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PABY_04510 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PABY_10870 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PABY_15820 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PABY_22310 hypothetical protein K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PABY_15860 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PABY_15810 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pabi00250]
D PABY_07280 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PABY_22290 isoaspartyl peptidase/L-asparaginase family protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PABY_14650 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PABY_01010 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PABY_01000 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PABY_05350 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PABY_05330 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PABY_04180 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PABY_04170 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PABY_16040 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PABY_18200 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PABY_15910 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PABY_09880 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PABY_00980 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PABY_19470 hypothetical protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PABY_00990 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PABY_13790 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PABY_16940 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PABY_13760 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PABY_13770 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pabi00260]
D PABY_01040 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PABY_01030 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PABY_01050 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PABY_20690 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PABY_18530 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PABY_09290 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PABY_00530 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PABY_09860 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PABY_15400 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PABY_22410 HAD-IB family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PABY_10380 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PABY_10370 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PABY_15540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PABY_07530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PABY_14440 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PABY_12060 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PABY_05110 pyridoxal-phosphate dependent enzyme K10150 cysO; cysteine synthase / O-phosphoserine sulfhydrylase / cystathionine beta-synthase [EC:2.5.1.47 2.5.1.65 4.2.1.22]
D PABY_07520 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PABY_07510 TrpB-like pyridoxal phosphate-dependent enzyme K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PABY_02290 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pabi00270]
D PABY_04210 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PABY_05110 pyridoxal-phosphate dependent enzyme K10150 cysO; cysteine synthase / O-phosphoserine sulfhydrylase / cystathionine beta-synthase [EC:2.5.1.47 2.5.1.65 4.2.1.22]
D PABY_19970 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PABY_21650 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PABY_03780 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PABY_07780 speD_1; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PABY_10020 speD_2; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PABY_03530 speE_1; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PABY_20670 speE_2; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PABY_03180 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D PABY_16520 purine-nucleoside phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D PABY_10610 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PABY_10580 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PABY_01040 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PABY_01030 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PABY_01050 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PABY_20700 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PABY_07280 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PABY_15400 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:pabi00280]
D PABY_07530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PABY_00170 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PABY_20420 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23930 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pabi00290]
D PABY_15320 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PABY_22880 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PABY_15310 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PABY_22960 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PABY_22890 isocitrate/isopropylmalate dehydrogenase family protein K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PABY_22920 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PABY_22930 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PABY_22940 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PABY_22950 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PABY_04710 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PABY_19090 lysS_2; homocitrate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PABY_22900 homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pabi00300]
D PABY_01050 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PABY_01040 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PABY_01030 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PABY_04340 M20 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PABY_18750 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PABY_22100 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PABY_17860 lysW_argW; alpha-aminoadipate/glutamate carrier protein LysW/ArgW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D PABY_17850 lysX_2; lysine biosynthesis protein LysX K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43]
D PABY_17880 [LysW]-aminoadipate/[LysW]-glutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D PABY_17870 argC; N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D PABY_17840 aspartate aminotransferase family protein K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D PABY_17830 N-acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00310 Lysine degradation [PATH:pabi00310]
D PABY_07530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_15340 KamA family radical SAM protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:pabi00220]
D PABY_09800 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PABY_01010 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PABY_01000 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PABY_13790 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PABY_09880 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PABY_00980 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PABY_19470 hypothetical protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PABY_00990 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PABY_17970 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PABY_15910 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PABY_07280 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PABY_17860 lysW_argW; alpha-aminoadipate/glutamate carrier protein LysW/ArgW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D PABY_00970 lysX_1; lysine biosynthesis protein LysX K19412 argX; glutamate---[amino group carrier protein] ligase [EC:6.3.2.60]
D PABY_17880 [LysW]-aminoadipate/[LysW]-glutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D PABY_17870 argC; N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D PABY_17840 aspartate aminotransferase family protein K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D PABY_17830 N-acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00330 Arginine and proline metabolism [PATH:pabi00330]
D PABY_06820 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D PABY_06830 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D PABY_03460 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PABY_03530 speE_1; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PABY_20670 speE_2; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PABY_07780 speD_1; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PABY_10020 speD_2; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PABY_22150 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PABY_07280 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pabi00340]
D PABY_13030 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PABY_12820 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D PABY_12840 hypothetical protein K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PABY_13020 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) me thylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PABY_12830 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PABY_12800 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PABY_12910 hisBd; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PABY_19010 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PABY_12810 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:pabi00350]
D PABY_07280 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PABY_19010 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PABY_14200 mfnA; tyrosine decarboxylase MfnA K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D PABY_22110 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:pabi00360]
D PABY_02300 phenylacetate--CoA ligase family protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D PABY_07280 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PABY_19010 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:pabi00380]
D PABY_07530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pabi00400]
D PABY_07570 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PABY_07560 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PABY_07550 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D PABY_07380 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PABY_07630 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PABY_07620 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PABY_07610 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PABY_07480 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PABY_07470 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PABY_07500 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PABY_07490 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PABY_07460 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PABY_07520 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PABY_07510 TrpB-like pyridoxal phosphate-dependent enzyme K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PABY_02290 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PABY_07600 chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PABY_14420 hypothetical protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D PABY_07280 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PABY_19010 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pabi00410]
D PABY_14200 mfnA; tyrosine decarboxylase MfnA K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D PABY_16040 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PABY_00770 4-phosphopantoate--beta-alanine ligase K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pabi00450]
D PABY_20700 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PABY_19970 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PABY_21650 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PABY_04970 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PABY_14430 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PABY_10340 metG_2; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pabi00460]
D PABY_22290 isoaspartyl peptidase/L-asparaginase family protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PABY_09290 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pabi00470]
D PABY_13790 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PABY_00110 DUF1611 domain-containing protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D PABY_00100 ykfB; L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
C 00480 Glutathione metabolism [PATH:pabi00480]
D PABY_17480 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PABY_03530 speE_1; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PABY_20670 speE_2; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pabi00730]
D PABY_00720 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PABY_17310 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D PABY_20260 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PABY_00710 sulfide-dependent adenosine diphosphate thiazole synthase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D PABY_11830 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PABY_16310 NTPase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D PABY_08540 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pabi00740]
D PABY_20330 GTP cyclohydrolase IIa K08096 gch3; GTP cyclohydrolase IIa [EC:3.5.4.29]
D PABY_20340 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302]
D PABY_20320 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D PABY_20300 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PABY_20310 ribC; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PABY_15050 hypothetical protein K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161]
D PABY_03570 DUF357 domain-containing protein K14656 ribL; FAD synthetase [EC:2.7.7.2]
D PABY_06600 hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PABY_14230 hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PABY_03380 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pabi00750]
D PABY_18530 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PABY_01360 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D PABY_01350 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pabi00760]
D PABY_10440 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PABY_07810 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PABY_02260 nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1]
D PABY_09700 nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1]
D PABY_16620 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PABY_14780 cobB; NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PABY_23470 hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PABY_06760 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:pabi00770]
D PABY_22920 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PABY_22930 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PABY_22940 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PABY_22950 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PABY_06000 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PABY_05990 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PABY_21700 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PABY_05810 hypothetical protein K06982 pok; pantoate kinase [EC:2.7.1.169]
D PABY_00770 4-phosphopantoate--beta-alanine ligase K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
D PABY_05780 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PABY_21890 GTP-dependent dephospho-CoA kinase K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237]
D PABY_14200 mfnA; tyrosine decarboxylase MfnA K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00780 Biotin metabolism [PATH:pabi00780]
D PABY_01180 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PABY_02490 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PABY_12150 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PABY_10850 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pabi00785]
D PABY_12110 radical SAM protein K09711 lipS1; lipoyl synthase
D PABY_12100 radical SAM protein K24689 lipS2; lipoyl synthase
D PABY_12090 biotin/lipoate A/B protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PABY_07530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PABY_10380 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PABY_10370 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PABY_15540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PABY_14440 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pabi00790]
D PABY_15990 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PABY_14400 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PABY_15850 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PABY_14410 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PABY_07260 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PABY_03120 hypothetical protein K17487 mptB; 7,8-dihydroneopterin 2',3'-cyclic phosphate phosphodiesterase [EC:3.1.4.56]
D PABY_16790 DUF115 domain-containing protein K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PABY_04380 GHMP kinase K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D PABY_07240 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D PABY_23450 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D PABY_03160 RimK family alpha-L-glutamate ligase K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33]
D PABY_09820 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PABY_16370 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PABY_13180 hypothetical protein K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D PABY_18020 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PABY_04400 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:pabi00670]
D PABY_09290 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PABY_15540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PABY_15810 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D PABY_03350 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pabi00860]
D PABY_20480 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PABY_04930 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PABY_15600 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PABY_20900 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PABY_15590 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PABY_15570 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PABY_15580 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PABY_22660 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D PABY_03320 radical SAM protein K22226 ahbC; Fe-coproporphyrin III synthase
D PABY_03300 TIGR04053 family radical SAM/SPASM domain-containing protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D PABY_17500 hypothetical protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D PABY_09810 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PABY_00090 hypothetical protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PABY_17100 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PABY_14670 hypothetical protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pabi00130]
D PABY_19140 ubiA; putative 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PABY_19160 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D PABY_03380 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PABY_03370 hypothetical protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PABY_18950 CofH family radical SAM protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D PABY_18940 mqnC; cyclic dehypoxanthinyl futalosine synthase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D PABY_19080 ABC transporter substrate-binding protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pabi00900]
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23930 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PABY_23980 hmgA; hydroxymethylglutaryl-CoA reductase (NADPH) K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D PABY_16080 hypothetical protein K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D PABY_20520 isopentenyl phosphate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26]
D PABY_02550 aconitase X K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182]
D PABY_02540 DUF126 domain-containing protein K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182]
D PABY_02560 UbiD family decarboxylase K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126]
D PABY_03380 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PABY_20510 fni; type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PABY_20500 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PABY_07930 uppS; polyprenyl diphosphate synthase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PABY_07580 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PABY_07590 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D PABY_16930 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PABY_18660 spn; bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:pabi00261]
D PABY_01040 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PABY_01030 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pabi00521]
D PABY_07830 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PABY_18190 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D PABY_11840 extragenic suppressor protein suhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PABY_16930 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PABY_18660 spn; bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
D PABY_16930 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PABY_18660 spn; bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C 00401 Novobiocin biosynthesis [PATH:pabi00401]
D PABY_07600 chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PABY_07280 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PABY_19010 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PABY_07480 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PABY_07470 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PABY_01180 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PABY_02490 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PABY_12150 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pabi00999]
D PABY_03780 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PABY_07380 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pabi00362]
D PABY_10830 hypothetical protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pabi00627]
D PABY_14190 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PABY_03380 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:pabi00625]
D PABY_22110 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:pabi00633]
D PABY_04060 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D PABY_01220 hyaluronate lyase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D PABY_00150 ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_14120 pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PABY_00140 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14130 porB; pyruvate synthase subunit PorB K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PABY_14100 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PABY_00170 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PABY_00160 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PABY_14110 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D PABY_06050 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D PABY_06040 CoA-transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pabi00626]
D PABY_22110 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pabi03020]
D PABY_01680 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D PABY_01670 rpoA1; DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D PABY_01660 rpoA2; DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D PABY_20590 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D PABY_02710 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D PABY_21870 DNA-directed RNA polymerase K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D PABY_21130 hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
D PABY_01690 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D PABY_16470 hypothetical protein K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D PABY_03470 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03022 Basal transcription factors [PATH:pabi03022]
D PABY_03500 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D PABY_21680 transcription initiation factor IIB family protein K03124 TFIIB; transcription initiation factor TFIIB
D PABY_16640 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D PABY_10620 transcription factor K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D PABY_03610 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pabi03010]
D PABY_20550 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PABY_08720 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PABY_20610 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PABY_08580 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PABY_01610 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PABY_08630 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PABY_20560 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PABY_01590 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PABY_20600 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PABY_01630 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PABY_20620 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PABY_08640 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PABY_21950 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PABY_08690 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PABY_08850 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PABY_21980 30S ribosomal protein S3ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D PABY_08660 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e
D PABY_21840 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e
D PABY_21730 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e
D PABY_21040 hypothetical protein K02962 RP-S17e; small subunit ribosomal protein S17e
D PABY_01950 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e
D PABY_21900 hypothetical protein K02974 RP-S24e; small subunit ribosomal protein S24e
D PABY_10280 hypothetical protein K02975 RP-S25e; small subunit ribosomal protein S25e
D PABY_11510 30S ribosomal protein S26e K02976 RP-S26e; small subunit ribosomal protein S26e
D PABY_02630 30S ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e
D PABY_21910 hypothetical protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D PABY_20450 hypothetical protein K02979 RP-S28e; small subunit ribosomal protein S28e
D PABY_16590 hypothetical protein K02983 RP-S30e; small subunit ribosomal protein S30e
D PABY_01840 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PABY_08860 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PABY_08760 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PABY_08650 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PABY_08620 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PABY_01830 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PABY_01850 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PABY_22280 rpl12p; 50S ribosomal protein P1 K02869 RP-L12; large subunit ribosomal protein L12
D PABY_20570 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PABY_08680 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PABY_08560 uL15 family ribosomal protein K02876 RP-L15; large subunit ribosomal protein L15
D PABY_08590 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PABY_08730 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PABY_08740 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PABY_08670 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PABY_08710 hypothetical protein K02904 RP-L29; large subunit ribosomal protein L29
D PABY_08570 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PABY_08750 rpl4p; 50S ribosomal protein L4 K02930 RP-L4e; large subunit ribosomal protein L4e
D PABY_20470 rpl7ae; 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D PABY_02760 50S ribosomal protein L16 K02866 RP-L10e; large subunit ribosomal protein L10e
D PABY_04010 hypothetical protein K02873 RP-L13e; large subunit ribosomal protein L13e
D PABY_08500 50S ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e
D PABY_20380 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e
D PABY_20580 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e
D PABY_08600 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e
D PABY_02830 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e
D PABY_20440 50S ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e
D PABY_01650 50S ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e
D PABY_01920 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e
D PABY_08610 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e
D PABY_08520 50S ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e
D PABY_16050 50S ribosomal protein L35ae K02917 RP-L35Ae; large subunit ribosomal protein L35Ae
D PABY_20190 50S ribosomal protein L37ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D PABY_21190 hypothetical protein K02923 RP-L38e; large subunit ribosomal protein L38e
D PABY_01930 50S ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e
D PABY_20120 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D PABY_02640 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e
D PABY_01900 hypothetical protein K02944 RP-LX; large subunit ribosomal protein LX
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pabi00970]
D PABY_20480 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PABY_19950 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PABY_15520 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PABY_10490 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PABY_16580 gatD; Glu-tRNA(Gln) amidotransferase subunit GatD K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7]
D PABY_16570 gatE; Glu-tRNA(Gln) amidotransferase subunit GatE K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7]
D PABY_01820 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PABY_07540 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PABY_03290 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D PABY_03450 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PABY_16950 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PABY_09330 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PABY_09950 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PABY_10340 metG_2; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PABY_16110 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PABY_09410 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PABY_06590 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PABY_03510 lysS_1; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PABY_10060 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PABY_11440 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PABY_16820 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PABY_16200 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PABY_16210 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PABY_16220 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PABY_16760 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pabi03060]
D PABY_08550 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PABY_02860 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PABY_01880 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PABY_01870 hypothetical protein K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D PABY_04120 hypothetical protein K03105 SRP19; signal recognition particle subunit SRP19
D PABY_01470 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PABY_18710 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PABY_11710 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PABY_11690 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D PABY_06930 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PABY_16450 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PABY_18650 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pabi04122]
D PABY_09820 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PABY_04440 MoaD family protein K03636 moaD; sulfur-carrier protein
D PABY_08000 hypothetical protein K03636 moaD; sulfur-carrier protein
D PABY_18980 MoaD family protein K03636 moaD; sulfur-carrier protein
D PABY_13180 hypothetical protein K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D PABY_20270 ThiF family adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PABY_16370 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PABY_18020 MogA/MoaB family molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PABY_20260 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PABY_03940 hypothetical protein K03154 thiS; sulfur carrier protein
D PABY_19990 MoaD/ThiS family protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome [PATH:pabi03050]
D PABY_10660 proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit
D PABY_20240 psmA; archaeal proteasome endopeptidase complex subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PABY_01730 psmB_1; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PABY_01760 psmB_2; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:pabi03018]
D PABY_02730 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4
D PABY_20220 rrp4; exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4
D PABY_20200 rrp42; exosome complex protein Rrp42 K12589 RRP42; exosome complex component RRP42
D PABY_20210 rrp41; exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41
D PABY_16410 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pabi03030]
D PABY_16230 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D PABY_15690 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PABY_09070 DNA-directed DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D PABY_16290 DNA polymerase II K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D PABY_16330 minichromosome maintenance protein MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D PABY_02660 priS; DNA primase catalytic subunit PriS K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D PABY_10260 hypothetical protein K18882 priL; DNA primase large subunit
D PABY_02670 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PABY_03150 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D PABY_08940 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
D PABY_16350 replication factor C small subunit K04801 rfcS; replication factor C small subunit
D PABY_16360 replication factor C large subunit K04800 rfcL; replication factor C large subunit
D PABY_23510 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PABY_22040 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03410 Base excision repair [PATH:pabi03410]
D PABY_20050 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D PABY_18290 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PABY_18800 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PABY_02670 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PABY_03150 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D PABY_08940 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
D PABY_23510 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PABY_22040 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D PABY_03900 udg; type-4 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PABY_18590 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
C 03420 Nucleotide excision repair [PATH:pabi03420]
D PABY_03610 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PABY_15660 xpf; 3'-flap repair endonuclease Xpf K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D PABY_21770 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D PABY_02670 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PABY_03150 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D PABY_08940 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
D PABY_22040 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03430 Mismatch repair [PATH:pabi03430]
D PABY_15870 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D PABY_02670 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PABY_03150 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D PABY_08940 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
D PABY_22040 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03440 Homologous recombination
C 03450 Non-homologous end-joining
D PABY_23510 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
D PABY_21880 DNA-binding protein K15171 SUPT4H1; transcription elongation factor SPT4
D PABY_01860 transcription elongation factor Spt5 K15172 SUPT5H; transcription elongation factor SPT5
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pabi02010]
D PABY_22990 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D PABY_23000 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D PABY_23740 ABC transporter ATP-binding protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D PABY_00800 hypothetical protein K15551 tauA; taurine transport system substrate-binding protein
D PABY_00780 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PABY_23710 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PABY_23730 ABC transporter permease K02018 modB; molybdate transport system permease protein
D PABY_03650 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PABY_22210 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PABY_03640 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PABY_22220 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PABY_03630 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PABY_15350 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PABY_24390 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D PABY_24400 ABC transporter permease subunit K02063 thiP; thiamine transport system permease protein
D PABY_05410 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D PABY_13060 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D PABY_03990 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D PABY_05470 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D PABY_03980 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D PABY_05480 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D PABY_04000 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PABY_05460 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PABY_18520 extracellular solute-binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein
D PABY_18510 sugar ABC transporter permease K17238 inoF; inositol-phosphate transport system permease protein
D PABY_18500 carbohydrate ABC transporter permease K17239 inoG; inositol-phosphate transport system permease protein
D PABY_18490 ABC transporter ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D PABY_07680 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PABY_07670 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D PABY_07660 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D PABY_07650 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PABY_05680 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_06770 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_11660 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_22790 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_05650 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PABY_06780 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PABY_22810 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PABY_05640 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_06790 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_11620 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_22800 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_05670 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_06800 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_11650 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_22830 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_05660 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_06810 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_11640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_22780 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_11630 branched-chain amino acid ABC transporter permease K11956 natD; neutral amino acid transport system permease protein
D PABY_14610 hypothetical protein K02009 cbiN; cobalt/nickel transport protein
D PABY_14620 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D PABY_14600 hypothetical protein K02008 cbiQ; cobalt/nickel transport system permease protein
D PABY_14590 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PABY_18090 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D PABY_23010 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PABY_14690 hypothetical protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D PABY_02450 hypothetical protein K02194 ccmB; heme exporter protein B
D PABY_18360 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:pabi03070]
D PABY_08550 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PABY_01880 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PABY_02860 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PABY_11710 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PABY_11690 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pabi02020]
D PABY_07680 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PABY_07720 hypothetical protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D PABY_22970 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PABY_14690 hypothetical protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D PABY_08020 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D PABY_09880 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_01220 hyaluronate lyase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D PABY_04060 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D PABY_11280 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pabi02024]
D PABY_07480 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PABY_07470 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PABY_05680 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_06770 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_11660 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_22790 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_05650 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PABY_06780 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PABY_22810 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PABY_05640 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_06790 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_11620 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_22800 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_05670 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_06800 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_11650 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_22830 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_05660 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_06810 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_11640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_22780 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_01530 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_22820 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_22840 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_00840 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PABY_14320 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PABY_15490 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PABY_23270 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PABY_14330 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PABY_15480 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PABY_17300 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PABY_23260 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PABY_14340 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PABY_15470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PABY_17290 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PABY_23250 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PABY_14350 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PABY_15460 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PABY_17280 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PABY_14360 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PABY_15450 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PABY_08550 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PABY_01880 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PABY_02860 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PABY_16410 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D PABY_00090 hypothetical protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PABY_17100 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pabi01000]
C 01001 Protein kinases [BR:pabi01001]
D PABY_21930 Kae1-associated kinase Bud32 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D PABY_11260 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PABY_03700 serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:pabi01009]
D PABY_07910 translation initiation factor IF-2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2
D PABY_10580 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PABY_22410 HAD-IB family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pabi01002]
D PABY_15150 hypothetical protein K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D PABY_12630 pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D PABY_22120 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PABY_13760 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PABY_13770 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PABY_16940 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PABY_14650 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PABY_18470 pfpI; deglycase PfpI K26818 pfpI; archaeal arginyl aminopeptidase [EC:3.4.11.27]
D PABY_18430 hypothetical protein K07052 K07052; CAAX protease family protein
D PABY_17480 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PABY_04340 M20 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PABY_18750 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PABY_16150 map; type II methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PABY_13570 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D PABY_11670 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PABY_18570 hypothetical protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PABY_19930 archaemetzincin family Zn-dependent metalloprotease K06974 amzA; archaemetzincin [EC:3.4.-.-]
D PABY_01400 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D PABY_06930 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PABY_16450 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PABY_18650 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PABY_22160 hypothetical protein K07059 K07059; rhomboid family protein
D PABY_20240 psmA; archaeal proteasome endopeptidase complex subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PABY_01730 psmB_1; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PABY_01760 psmB_2; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PABY_22290 isoaspartyl peptidase/L-asparaginase family protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PABY_22180 TldD/PmbA family protein K03592 pmbA; PmbA protein
D PABY_22170 TldD/PmbA family protein K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:pabi01003]
D PABY_17240 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15]
D PABY_23870 glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D PABY_00960 mpgS; mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pabi01011]
C 01004 Lipid biosynthesis proteins [BR:pabi01004]
D PABY_01180 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PABY_02490 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PABY_12150 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PABY_00920 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PABY_19180 acetate--CoA ligase family protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PABY_04660 acetate--CoA ligase family protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PABY_01530 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_22820 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_22840 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:pabi01006]
D PABY_20500 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PABY_19140 ubiA; putative 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PABY_09810 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pabi01007]
D PABY_03510 lysS_1; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PABY_20480 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PABY_16220 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PABY_16760 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PABY_09950 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PABY_10060 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PABY_10340 metG_2; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PABY_06590 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PABY_16110 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PABY_09410 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PABY_03290 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D PABY_16820 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PABY_03450 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PABY_09330 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PABY_11440 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PABY_16950 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PABY_01820 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PABY_07540 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PABY_16200 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PABY_16210 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PABY_07280 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PABY_19010 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PABY_17840 aspartate aminotransferase family protein K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D PABY_16040 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PABY_15600 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pabi03000]
D PABY_10610 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PABY_16640 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D PABY_04230 lysM; HTH-type transcriptional regulator LysM K06154 lysM; Lrp/AsnC family transcriptional regulator, involved in the regulation of lysine biosynthesis
D PABY_04250 hypothetical protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D PABY_04330 thiamine-phosphate synthase family protein K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator
D PABY_10850 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PABY_18920 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D PABY_23720 hypothetical protein K09714 tfx; HTH-type transcriptional regulator, fmd operon transcriptional regulator
D PABY_03280 hypothetical protein K07728 K07728; putative transcriptional regulator
D PABY_21090 helix-turn-helix domain-containing protein K07731 K07731; putative transcriptional regulator
D PABY_04080 hypothetical protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D PABY_07390 hypothetical protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D PABY_20740 CopG family ribbon-helix-helix protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D PABY_15790 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C 03021 Transcription machinery [BR:pabi03021]
D PABY_03500 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D PABY_21680 transcription initiation factor IIB family protein K03124 TFIIB; transcription initiation factor TFIIB
D PABY_16640 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D PABY_10620 transcription factor K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D PABY_03610 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PABY_21880 DNA-binding protein K15171 SUPT4H1; transcription elongation factor SPT4
D PABY_01860 transcription elongation factor Spt5 K15172 SUPT5H; transcription elongation factor SPT5
D PABY_04310 ATP/GTP-binding protein K24104 GPN; GPN-loop GTPase
D PABY_22870 ATP/GTP-binding protein K24104 GPN; GPN-loop GTPase
D PABY_01640 NusA-like transcription termination signal-binding factor K02600 nusA; transcription termination/antitermination protein NusA
D PABY_01670 rpoA1; DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D PABY_01660 rpoA2; DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D PABY_01680 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D PABY_20590 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D PABY_21870 DNA-directed RNA polymerase K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D PABY_21130 hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
D PABY_01690 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D PABY_16470 hypothetical protein K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D PABY_02710 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D PABY_03470 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
D PABY_02690 transcription factor S K03057 tfs; transcription factor S
D PABY_20640 hypothetical protein K03057 tfs; transcription factor S
C 03019 Messenger RNA biogenesis [BR:pabi03019]
D PABY_21880 DNA-binding protein K15171 SUPT4H1; transcription elongation factor SPT4
D PABY_01860 transcription elongation factor Spt5 K15172 SUPT5H; transcription elongation factor SPT5
D PABY_11300 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D PABY_23530 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D PABY_16270 mRNA surveillance protein pelota K06965 PELO; protein pelota
D PABY_09610 prf1; peptide chain release factor aRF-1 K03265 ETF1; peptide chain release factor subunit 1
D PABY_01600 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha
D PABY_02730 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4
D PABY_20220 rrp4; exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4
D PABY_20210 rrp41; exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41
D PABY_20200 rrp42; exosome complex protein Rrp42 K12589 RRP42; exosome complex component RRP42
D PABY_16410 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 03041 Spliceosome [BR:pabi03041]
D PABY_09220 hypothetical protein K06874 ZPR1; zinc finger protein ZPR1
C 03011 Ribosome [BR:pabi03011]
D PABY_21980 30S ribosomal protein S3ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D PABY_08660 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e
D PABY_21840 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e
D PABY_21730 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e
D PABY_21040 hypothetical protein K02962 RP-S17e; small subunit ribosomal protein S17e
D PABY_01950 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e
D PABY_21900 hypothetical protein K02974 RP-S24e; small subunit ribosomal protein S24e
D PABY_10280 hypothetical protein K02975 RP-S25e; small subunit ribosomal protein S25e
D PABY_11510 30S ribosomal protein S26e K02976 RP-S26e; small subunit ribosomal protein S26e
D PABY_02630 30S ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e
D PABY_21910 hypothetical protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D PABY_20450 hypothetical protein K02979 RP-S28e; small subunit ribosomal protein S28e
D PABY_16590 hypothetical protein K02983 RP-S30e; small subunit ribosomal protein S30e
D PABY_08750 rpl4p; 50S ribosomal protein L4 K02930 RP-L4e; large subunit ribosomal protein L4e
D PABY_20470 rpl7ae; 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D PABY_02760 50S ribosomal protein L16 K02866 RP-L10e; large subunit ribosomal protein L10e
D PABY_04010 hypothetical protein K02873 RP-L13e; large subunit ribosomal protein L13e
D PABY_08500 50S ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e
D PABY_20380 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e
D PABY_20580 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e
D PABY_08600 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e
D PABY_02830 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e
D PABY_20440 50S ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e
D PABY_01650 50S ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e
D PABY_01920 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e
D PABY_08610 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e
D PABY_08520 50S ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e
D PABY_16050 50S ribosomal protein L35ae K02917 RP-L35Ae; large subunit ribosomal protein L35Ae
D PABY_20190 50S ribosomal protein L37ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D PABY_21190 hypothetical protein K02923 RP-L38e; large subunit ribosomal protein L38e
D PABY_01930 50S ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e
D PABY_20120 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D PABY_02640 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e
D PABY_20550 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PABY_08720 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PABY_20610 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PABY_08580 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PABY_01610 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PABY_08630 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PABY_20560 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PABY_01590 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PABY_20600 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PABY_01630 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PABY_20620 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PABY_08640 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PABY_21950 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PABY_08690 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PABY_08850 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PABY_01840 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PABY_08860 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PABY_08760 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PABY_08650 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PABY_08620 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PABY_01830 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PABY_01850 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PABY_20570 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PABY_08680 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PABY_08560 uL15 family ribosomal protein K02876 RP-L15; large subunit ribosomal protein L15
D PABY_08590 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PABY_08730 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PABY_08740 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PABY_08670 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PABY_08710 hypothetical protein K02904 RP-L29; large subunit ribosomal protein L29
D PABY_08570 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PABY_22280 rpl12p; 50S ribosomal protein P1 K02869 RP-L12; large subunit ribosomal protein L12
D PABY_01900 hypothetical protein K02944 RP-LX; large subunit ribosomal protein LX
C 03009 Ribosome biogenesis [BR:pabi03009]
D PABY_03250 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit K14564 NOP56; nucleolar protein 56
D PABY_02610 RNA-protein complex protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D PABY_20180 hypothetical protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D PABY_01970 16S rRNA methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D PABY_22460 16S rRNA methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D PABY_11270 KH domain-containing protein K06961 KRR1; ribosomal RNA assembly protein
D PABY_11260 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PABY_03700 serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D PABY_21060 adenylate kinase family protein K18532 AK6; adenylate kinase [EC:2.7.4.3]
D PABY_03070 DUF367 family protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D PABY_21010 ribosome biogenesis/translation initiation ATPase RLI K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
D PABY_02280 NOG1 family protein K06943 NOG1; nucleolar GTP-binding protein
D PABY_08700 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D PABY_20350 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D PABY_20360 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PABY_02570 Clp1/GlmU family protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
D PABY_04410 Clp1/GlmU family protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
D PABY_01910 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6
D PABY_07700 hypothetical protein K07562 NMD3; 60S ribosomal export protein NMD3
D PABY_09460 hypothetical protein K07562 NMD3; 60S ribosomal export protein NMD3
D PABY_20230 ribosome assembly factor SBDS K14574 SDO1; ribosome maturation protein SDO1
D PABY_11300 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D PABY_23530 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D PABY_02240 hypothetical protein K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D PABY_03260 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase K04795 flpA; fibrillarin-like pre-rRNA processing protein
D PABY_20470 rpl7ae; 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D PABY_21690 hypothetical protein K07569 gar1; RNA-binding protein
D PABY_01640 NusA-like transcription termination signal-binding factor K02600 nusA; transcription termination/antitermination protein NusA
D PABY_02800 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6)) -dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PABY_15680 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PABY_20930 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PABY_22330 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PABY_08480 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PABY_20070 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PABY_16280 rimI_1; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PABY_17130 rimI_2; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PABY_18230 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PABY_10640 hflX; GTPase HflX K03665 hflX; GTPase
D PABY_05500 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PABY_01960 hypothetical protein K07574 yhbY; RNA-binding protein
D PABY_20390 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D PABY_02500 ribonuclease E/G K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-]
C 03016 Transfer RNA biogenesis [BR:pabi03016]
D PABY_08700 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D PABY_20350 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D PABY_20360 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PABY_13360 MBL fold metallo-hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PABY_24080 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PABY_22550 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D PABY_22560 hypothetical protein K24956 ZBTB8OS; protein archease
D PABY_01600 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha
D PABY_20480 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PABY_11440 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PABY_06590 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PABY_09410 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PABY_10340 metG_2; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PABY_10060 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PABY_01820 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PABY_07540 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PABY_03450 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PABY_16950 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PABY_09330 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PABY_09950 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PABY_16110 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PABY_16820 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PABY_16200 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PABY_16210 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PABY_16220 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PABY_16760 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PABY_11420 D-aminoacyl-tRNA deacylase K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PABY_09670 alaXM; alanyl-tRNA editing protein AlaXM K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D PABY_14810 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PABY_07980 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotran sferase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
D PABY_21660 tRNA (guanine(26)-N(2))-dimethyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D PABY_03870 methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PABY_23480 hypothetical protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PABY_18540 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D PABY_10400 twy1; 4-demethylwyosine synthase TYW1 K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D PABY_03210 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D PABY_10700 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D PABY_08490 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PABY_23570 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D PABY_02840 tRNA pseudouridine(54/55) synthase Pus10 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
D PABY_21930 Kae1-associated kinase Bud32 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D PABY_21920 kae1; KEOPS complex N(6)-L-threonylcarbamoyladenine synthase Kae1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D PABY_05500 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PABY_21990 SPOUT family RNA methylase K06963 TAN1; tRNA acetyltransferase TAN1
D PABY_09930 hypothetical protein K06963 TAN1; tRNA acetyltransferase TAN1
D PABY_01060 RNA ligase partner protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5]
D PABY_03100 cca; CCA tRNA nucleotidyltransferase K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72]
D PABY_03400 endA; tRNA-intron lyase K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
D PABY_16830 hypothetical protein K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
D PABY_22490 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D PABY_20880 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D PABY_03510 lysS_1; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PABY_03290 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D PABY_16000 hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PABY_11500 hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D PABY_03830 trm10; tRNA (guanine(9)-/adenine(9)-N1)-methyltransferase K15566 trm10; tRNA (adenine9-N1/guanine9-N1)-methyltransferase [EC:2.1.1.218 2.1.1.221]
D PABY_02770 trm14; tRNA (guanine(6)-N2)-methyltransferase K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256]
D PABY_00730 TRM11 family methyltransferase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213]
D PABY_10630 tRNA (cytidine(56)-2'-O)-methyltransferase K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206]
D PABY_03950 TIGR00269 family protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D PABY_07260 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PABY_14400 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PABY_15850 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PABY_14410 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PABY_12560 hypothetical protein K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48]
D PABY_21150 tgtA; tRNA guanosine(15) transglycosylase TgtA K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48]
D PABY_20260 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PABY_03050 tiaS; tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22]
D PABY_10800 tRNA(Met) cytidine acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D PABY_16810 tRNA(Met) cytidine acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D PABY_19900 hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D PABY_24010 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:pabi03012]
D PABY_11200 hypothetical protein K03236 EIF1A; translation initiation factor 1A
D PABY_03480 yciH; stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1
D PABY_02620 translation initiation factor IF-2 subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1
D PABY_07910 translation initiation factor IF-2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2
D PABY_21850 eif2g; translation initiation factor IF-2 subunit gamma K03242 EIF2S3; translation initiation factor 2 subunit 3
D PABY_02880 translation initiation factor IF-5A K03263 EIF5A; translation initiation factor 5A
D PABY_21830 infB; translation initiation factor IF-2 K03243 EIF5B; translation initiation factor 5B
D PABY_01910 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6
D PABY_01600 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha
D PABY_23540 elongation factor 1-beta K03232 EEF1B; elongation factor 1-beta
D PABY_15650 elongation factor EF-2 K03234 EEF2; elongation factor 2
D PABY_02750 dph2; diphthamide biosynthesis enzyme Dph2 K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108]
D PABY_07750 diphthine--ammonia ligase K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14]
D PABY_09610 prf1; peptide chain release factor aRF-1 K03265 ETF1; peptide chain release factor subunit 1
D PABY_02790 class I SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PABY_23560 pth2; peptidyl-tRNA hydrolase Pth2 K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]
C 03110 Chaperones and folding catalysts [BR:pabi03110]
D PABY_16480 thsA; thermosome subunit alpha K22447 cct; archaeal chaperonin
D PABY_21050 thsB; thermosome subunit beta K22447 cct; archaeal chaperonin
D PABY_09230 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D PABY_07860 hypothetical protein K13993 HSP20; HSP20 family protein
D PABY_01890 hypothetical protein K04797 pfdA; prefoldin alpha subunit
D PABY_20160 prefoldin subunit beta K04798 pfdB; prefoldin beta subunit
D PABY_06280 hypA_1; hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D PABY_18790 hypA_2; hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D PABY_18780 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D PABY_02230 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PABY_08010 hypothetical protein K03671 TXN; thioredoxin
D PABY_10460 trxA; thioredoxin K03671 TXN; thioredoxin
D PABY_13040 hypothetical protein K03671 TXN; thioredoxin
D PABY_16490 hypothetical protein K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:pabi04131]
D PABY_20400 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PABY_11300 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D PABY_23530 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D PABY_01470 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PABY_18710 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PABY_01870 hypothetical protein K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D PABY_01600 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha
C 04121 Ubiquitin system [BR:pabi04121]
D PABY_20120 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D PABY_21910 hypothetical protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D PABY_16590 hypothetical protein K02983 RP-S30e; small subunit ribosomal protein S30e
C 03051 Proteasome [BR:pabi03051]
D PABY_20240 psmA; archaeal proteasome endopeptidase complex subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PABY_01730 psmB_1; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PABY_01760 psmB_2; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PABY_10660 proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit
C 03032 DNA replication proteins [BR:pabi03032]
D PABY_02670 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PABY_03150 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D PABY_08940 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
D PABY_23510 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PABY_22040 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D PABY_10610 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PABY_02610 RNA-protein complex protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D PABY_15660 xpf; 3'-flap repair endonuclease Xpf K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D PABY_21770 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D PABY_16230 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D PABY_16390 ORC1-type DNA replication protein K10725 cdc6A; archaeal cell division control protein 6
D PABY_23620 ORC1-type DNA replication protein K10725 cdc6A; archaeal cell division control protein 6
D PABY_16330 minichromosome maintenance protein MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D PABY_02660 priS; DNA primase catalytic subunit PriS K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D PABY_10260 hypothetical protein K18882 priL; DNA primase large subunit
D PABY_16340 hypothetical protein K09723 ginS; DNA replication factor GINS
D PABY_15690 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PABY_09070 DNA-directed DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D PABY_16290 DNA polymerase II K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D PABY_16360 replication factor C large subunit K04800 rfcL; replication factor C large subunit
D PABY_16350 replication factor C small subunit K04801 rfcS; replication factor C small subunit
D PABY_16890 DNA topoisomerase IV subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2]
D PABY_16880 DNA topoisomerase VI subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2]
D PABY_16460 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PABY_06560 rgy_1; reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
D PABY_16610 rgy_2; reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:pabi03036]
D PABY_10610 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PABY_08770 putative RNA uridine N3 methyltransferase K09142 SPOUT1; methyltransferase [EC:2.1.1.-]
D PABY_00900 hypothetical protein K04763 xerD; integrase/recombinase XerD
D PABY_06270 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PABY_08970 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:pabi03400]
D PABY_10420 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PABY_20050 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D PABY_18290 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PABY_18800 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PABY_02670 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D PABY_03150 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D PABY_08940 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
D PABY_23510 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PABY_22040 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D PABY_03610 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PABY_15660 xpf; 3'-flap repair endonuclease Xpf K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D PABY_21770 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D PABY_16060 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PABY_15860 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PABY_03900 udg; type-4 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PABY_18590 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PABY_01750 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D PABY_15870 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D PABY_09900 rad50; DNA double-strand break repair ATPase Rad50 K03546 sbcC; DNA repair protein SbcC/Rad50
D PABY_09910 mre11; DNA double-strand break repair protein Mre11 K03547 sbcD; DNA repair protein SbcD/Mre11
D PABY_12410 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D PABY_16960 radA; DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA
D PABY_02590 hypothetical protein K04484 radB; DNA repair protein RadB
D PABY_09020 hjc; Holliday junction resolvase Hjc K03552 hjr; holliday junction resolvase [EC:3.1.21.10]
D PABY_09920 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PABY_22250 DEAD/DEAH box helicase K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D PABY_16460 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PABY_08900 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PABY_16710 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PABY_17040 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PABY_15820 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PABY_09620 Nre family DNA repair protein K22585 nreA; DNA repair protein NreA
C 03029 Mitochondrial biogenesis [BR:pabi03029]
D PABY_08700 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D PABY_20350 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D PABY_20360 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PABY_16220 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PABY_09410 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PABY_03450 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PABY_10060 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PABY_19950 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PABY_15520 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PABY_10490 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PABY_06270 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PABY_08970 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PABY_09810 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pabi02000]
D PABY_23710 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PABY_23730 ABC transporter permease K02018 modB; molybdate transport system permease protein
D PABY_23740 ABC transporter ATP-binding protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D PABY_22990 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D PABY_23000 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D PABY_00800 hypothetical protein K15551 tauA; taurine transport system substrate-binding protein
D PABY_00780 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PABY_03650 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PABY_22210 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PABY_03640 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PABY_22220 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PABY_03630 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PABY_15350 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PABY_24390 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D PABY_24400 ABC transporter permease subunit K02063 thiP; thiamine transport system permease protein
D PABY_00790 hypothetical protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PABY_18520 extracellular solute-binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein
D PABY_18510 sugar ABC transporter permease K17238 inoF; inositol-phosphate transport system permease protein
D PABY_18500 carbohydrate ABC transporter permease K17239 inoG; inositol-phosphate transport system permease protein
D PABY_18490 ABC transporter ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D PABY_05410 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D PABY_13060 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D PABY_03990 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D PABY_05470 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D PABY_03980 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D PABY_05480 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D PABY_04000 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PABY_05460 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PABY_07680 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PABY_07670 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D PABY_07660 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D PABY_07650 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PABY_05680 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_06770 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_11660 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_22790 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PABY_05650 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PABY_06780 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PABY_22810 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PABY_05640 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_06790 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_11620 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_22800 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PABY_05670 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_06800 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_11650 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_22830 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PABY_05660 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_06810 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_11640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_22780 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PABY_11630 branched-chain amino acid ABC transporter permease K11956 natD; neutral amino acid transport system permease protein
D PABY_00840 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PABY_14320 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PABY_15490 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PABY_23270 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PABY_14330 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PABY_15480 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PABY_17300 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PABY_23260 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PABY_14340 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PABY_15470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PABY_17290 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PABY_23250 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PABY_14350 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PABY_15460 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PABY_17280 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PABY_14360 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PABY_15450 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PABY_14300 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D PABY_14310 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PABY_14290 hypothetical protein K25034 btuF; cobalamin transport system substrate-binding protein
D PABY_14610 hypothetical protein K02009 cbiN; cobalt/nickel transport protein
D PABY_14600 hypothetical protein K02008 cbiQ; cobalt/nickel transport system permease protein
D PABY_14620 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D PABY_14590 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PABY_18090 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D PABY_23010 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PABY_20760 hypothetical protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PABY_20750 hypothetical protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D PABY_20770 ATP-binding cassette domain-containing protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D PABY_14690 hypothetical protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D PABY_18360 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D PABY_19860 ATP-binding cassette domain-containing protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D PABY_02450 hypothetical protein K02194 ccmB; heme exporter protein B
D PABY_06080 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PABY_14140 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PABY_15750 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PABY_17320 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PABY_17580 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PABY_18060 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PABY_19870 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PABY_06070 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PABY_14150 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PABY_15740 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PABY_17330 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PABY_17400 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PABY_17590 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PABY_18050 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PABY_04110 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PABY_04090 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PABY_17680 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PABY_17910 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PABY_18890 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PABY_24040 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D PABY_19000 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PABY_22390 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PABY_19170 ion channel K10716 kch; voltage-gated potassium channel
D PABY_22200 ion channel K10716 kch; voltage-gated potassium channel
D PABY_08030 ammonium transporter K03320 amt; ammonium transporter, Amt family
D PABY_18600 hypothetical protein K06213 mgtE; magnesium transporter
D PABY_15430 hypothetical protein K06199 crcB; fluoride exporter
D PABY_13370 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D PABY_12330 hypothetical protein K03297 emrE; small multidrug resistance pump
D PABY_20430 hypothetical protein K03298 TC.DME; drug/metabolite transporter, DME family
D PABY_01420 hypothetical protein K07301 yrbG; cation:H+ antiporter
D PABY_17160 cation acetate symporter K14393 actP; cation/acetate symporter
D PABY_22600 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D PABY_16420 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D PABY_11220 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PABY_15710 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PABY_01470 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PABY_18710 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PABY_00740 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D PABY_03960 hypothetical protein K24180 mleP; malate permease and related proteins
D PABY_09120 MarC family protein K05595 marC; multiple antibiotic resistance protein
D PABY_11920 NAAT family transporter K05595 marC; multiple antibiotic resistance protein
D PABY_10820 carboxyl transferase domain-containing protein K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D PABY_10830 hypothetical protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PABY_22320 FeoA family protein K04758 feoA; ferrous iron transport protein A
D PABY_23230 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PABY_08870 hypothetical protein K25503 cedB; DNA import protein CedB
D PABY_08880 hypothetical protein K25504 cedA; DNA import protein CedA
D PABY_08890 hypothetical protein K25505 cedA1; DNA import protein CedA1
D PABY_02430 hypothetical protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D PABY_05240 hypothetical protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:pabi02044]
D PABY_05070 flagellin K07325 flaB; archaeal flagellin FlaB
D PABY_05030 hypothetical protein K07329 flaF; archaeal flagellar protein FlaF
D PABY_05040 hypothetical protein K07330 flaG; archaeal flagellar protein FlaG
D PABY_05020 ATPase domain-containing protein K07331 flaH; archaeal flagellar protein FlaH
D PABY_05010 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI
D PABY_05170 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI
D PABY_05000 flaJ; archaellar assembly protein FlaJ K07333 flaJ; archaeal flagellar protein FlaJ
D PABY_05160 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ
D PABY_08550 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PABY_02860 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PABY_01880 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PABY_01870 hypothetical protein K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D PABY_04120 hypothetical protein K03105 SRP19; signal recognition particle subunit SRP19
D PABY_11710 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PABY_11690 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins
C 02022 Two-component system
C 02035 Bacterial motility proteins [BR:pabi02035]
D PABY_05070 flagellin K07325 flaB; archaeal flagellin FlaB
D PABY_05030 hypothetical protein K07329 flaF; archaeal flagellar protein FlaF
D PABY_05040 hypothetical protein K07330 flaG; archaeal flagellar protein FlaG
D PABY_05020 ATPase domain-containing protein K07331 flaH; archaeal flagellar protein FlaH
D PABY_05010 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI
D PABY_05170 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI
D PABY_05000 flaJ; archaellar assembly protein FlaJ K07333 flaJ; archaeal flagellar protein FlaJ
D PABY_05160 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pabi04812]
D PABY_20540 amrB; AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein
C 04147 Exosome [BR:pabi04147]
D PABY_16410 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PABY_16700 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PABY_00540 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PABY_01600 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha
D PABY_15650 elongation factor EF-2 K03234 EEF2; elongation factor 2
D PABY_23510 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PABY_22130 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PABY_21910 hypothetical protein K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D PABY_11300 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D PABY_23530 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D PABY_14810 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PABY_01530 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_22820 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_22840 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PABY_01510 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23210 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_23940 thiolase domain-containing protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PABY_10580 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PABY_08540 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PABY_13050 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PABY_13400 hypothetical protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PABY_01000 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PABY_01010 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PABY_09880 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PABY_20900 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PABY_15400 D-2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PABY_07530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PABY_01540 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D PABY_15910 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PABY_20980 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:pabi02048]
D PABY_12410 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D PABY_12400 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D PABY_12420 cas4a; type I-A CRISPR-associated protein Cas4/Csa1 K19085 csa1; CRISPR-associated protein Csa1
D PABY_12390 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D PABY_16740 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D PABY_12340 hypothetical protein K19135 csx14; CRISPR-associated protein Csx14
D PABY_12650 hypothetical protein K09000 cmr4; CRISPR-associated protein Cmr4
D PABY_10610 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PABY_15790 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D PABY_04290 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D PABY_23150 hypothetical protein K07341 doc; death on curing protein
D PABY_24010 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D PABY_20480 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PABY_23460 nob1; type II toxin-antitoxin system toxin endoribonuclease Nob1 K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PABY_19410 UDP-N-acetylglucosamine 3-dehydrogenase K18855 E1.1.1.374; UDP-N-acetylglucosamine 3-dehydrogenase [EC:1.1.1.374]
D PABY_02330 iorA; indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D PABY_02340 indolepyruvate oxidoreductase subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D PABY_15120 cdr; CoA-disulfide reductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D PABY_02220 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PABY_15190 NADH-quinone oxidoreductase subunit B family protein K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D PABY_20830 class II SORL domain-containing protein K05919 dfx; superoxide reductase [EC:1.15.1.2]
D PABY_09370 radical SAM protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D PABY_04530 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PABY_12080 hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PABY_13630 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PABY_14730 amrS; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PABY_09350 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PABY_23500 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PABY_04360 dph5; diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98]
D PABY_05600 hypothetical protein K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350]
D PABY_04720 modD; ModD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D PABY_03330 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D PABY_06720 pgsA; archaetidylinositol phosphate synthase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39]
D PABY_17390 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PABY_15960 hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D PABY_19070 ARMT1-like domain-containing protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D PABY_09380 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PABY_10250 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D PABY_20280 hypothetical protein K24697 mftE; mycofactocin precursor peptide peptidase [EC:3.4.14.14]
D PABY_00240 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PABY_09150 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PABY_22740 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PABY_13530 S-adenosyl-l-methionine hydroxide adenosyltransferase family protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D PABY_16630 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PABY_21810 hypothetical protein K01741 E4.2.99.18; DNA-(apurinic or apyrimidinic site) lyase [EC:4.2.99.18]
D PABY_02270 rtcA; RNA 3'-terminal phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D PABY_01090 RNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-]
D PABY_20020 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
D PABY_04680 hypothetical protein K06206 sfsA; sugar fermentation stimulation protein A
D PABY_20850 hypothetical protein K06206 sfsA; sugar fermentation stimulation protein A
D PABY_10530 lactate utilization protein B K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D PABY_21780 ferredoxin K05337 fer; ferredoxin
D PABY_15170 nickel-dependent hydrogenase large subunit K14090 echE; ech hydrogenase subunit E
D PABY_10180 hypothetical protein K02573 napG; ferredoxin-type protein NapG
D PABY_10190 napH; quinol dehydrogenase ferredoxin subunit NapH K02574 napH; ferredoxin-type protein NapH
D PABY_01550 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D PABY_10240 YbhN family protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D PABY_13140 hypothetical protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PABY_10650 multiprotein bridging factor aMBF1 K03627 MBF1; putative transcription factor
D PABY_16600 albA; DNA-binding protein Alba K03622 ssh10b; archaea-specific DNA-binding protein
D PABY_01700 LSm family protein K04796 RUXX; small nuclear ribonucleoprotein
D PABY_03770 U6 snRNA-associated Sm-like protein LSm6 K04796 RUXX; small nuclear ribonucleoprotein
D PABY_09750 transcriptional regulator K07743 K07743; transcriptional regulator
D PABY_04260 CBS domain-containing protein K07744 K07744; transcriptional regulator
D PABY_09580 hypothetical protein K07745 K07745; transcriptional regulator
D PABY_14740 hypothetical protein K07745 K07745; transcriptional regulator
C 99974 Translation
D PABY_02810 DUF655 domain-containing protein K07572 K07572; putative nucleotide binding protein
D PABY_10500 MBL fold metallo-hydrolase K07577 K07577; putative mRNA 3-end processing factor
D PABY_21110 MBL fold metallo-hydrolase K07577 K07577; putative mRNA 3-end processing factor
D PABY_02740 METTL5 family protein K07579 K07579; putative methylase
D PABY_23550 zinc finger domain-containing protein K07580 K07580; Zn-ribbon RNA-binding protein
D PABY_20370 RNA-binding domain-containing protein K07581 K07581; RNA-binding protein
C 99975 Protein processing
D PABY_15090 hypothetical protein K02380 fdhE; FdhE protein
D PABY_01300 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D PABY_01310 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D PABY_01290 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D PABY_01280 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D PABY_21170 hypothetical protein K07398 K07398; conserved protein with predicted RNA binding PUA domain
D PABY_04270 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D PABY_22260 RuvB-like helicase K07472 TIP49; TBP-interacting protein
D PABY_21070 hypothetical protein K07477 K07477; translin
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PABY_02320 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
C 99978 Cell growth
D PABY_09180 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
C 99993 Cell motility
C 99995 Signaling proteins
D PABY_18730 carbon starvation protein A K06200 cstA; carbon starvation protein
D PABY_14770 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D PABY_03090 hypothetical protein K07176 K07176; putative serine/threonine protein kinase
D PABY_17170 hypothetical protein K07182 K07182; CBS domain-containing protein
D PABY_04140 ATPase domain-containing protein K08482 kaiC; circadian clock protein KaiC
D PABY_04820 hypothetical protein K08482 kaiC; circadian clock protein KaiC
D PABY_05090 hypothetical protein K08482 kaiC; circadian clock protein KaiC
D PABY_05140 ATPase domain-containing protein K08482 kaiC; circadian clock protein KaiC
D PABY_01940 DNA-binding protein K06875 PDCD5; programmed cell death protein 5
C 99992 Structural proteins
C 99994 Others
D PABY_19110 phosphate uptake regulator PhoU K02039 phoU; phosphate transport system protein
D PABY_18220 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D PABY_01260 hypothetical protein K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PABY_09030 PINc/VapC family ATPase K06865 K06865; ATPase
D PABY_04040 metG_1; methionine--tRNA ligase subunit beta K06878 K06878; tRNA-binding protein
D PABY_17900 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PABY_18900 SufD family Fe-S cluster assembly protein K09014 sufB; Fe-S cluster assembly protein SufB
D PABY_01190 hypothetical protein K07038 K07038; inner membrane protein
D PABY_09170 TatD family hydrolase K07049 K07049; TatD-related deoxyribonuclease
D PABY_02530 hypothetical protein K07143 K07143; UPF0148 protein
D PABY_07940 hypothetical protein K08975 K08975; putative membrane protein
C 99997 Function unknown
D PABY_07870 proteasome assembly chaperone family protein K06869 K06869; uncharacterized protein
D PABY_21160 PAC2 family protein K06869 K06869; uncharacterized protein
D PABY_03890 hypothetical protein K06870 K06870; uncharacterized protein
D PABY_20720 PGF-CTERM sorting domain-containing protein K06870 K06870; uncharacterized protein
D PABY_11520 hypothetical protein K06885 K06885; uncharacterized protein
D PABY_00050 ATP-binding protein K06921 K06921; uncharacterized protein
D PABY_00650 ATP-binding protein K06921 K06921; uncharacterized protein
D PABY_01430 hypothetical protein K06921 K06921; uncharacterized protein
D PABY_04670 ATP-binding protein K06921 K06921; uncharacterized protein
D PABY_04880 ATP-binding protein K06921 K06921; uncharacterized protein
D PABY_05530 ATP-binding protein K06921 K06921; uncharacterized protein
D PABY_13730 ATP-binding protein K06921 K06921; uncharacterized protein
D PABY_14390 hypothetical protein K06921 K06921; uncharacterized protein
D PABY_24130 hypothetical protein K06921 K06921; uncharacterized protein
D PABY_12900 ATP-binding protein K06921 K06921; uncharacterized protein
D PABY_23770 radical SAM protein K06935 K06935; uncharacterized protein
D PABY_03560 hypothetical protein K06940 K06940; uncharacterized protein
D PABY_08790 hypothetical protein K06940 K06940; uncharacterized protein
D PABY_10360 hypothetical protein K06940 K06940; uncharacterized protein
D PABY_09850 HD domain-containing protein K06950 K06950; uncharacterized protein
D PABY_13170 hypothetical protein K06950 K06950; uncharacterized protein
D PABY_23800 metallophosphoesterase K06953 K06953; uncharacterized protein
D PABY_10470 BtpA/SgcQ family protein K06971 K06971; uncharacterized protein
D PABY_03190 hypothetical protein K06983 K06983; uncharacterized protein
D PABY_10320 MBL fold metallo-hydrolase K07022 K07022; uncharacterized protein
D PABY_17890 SufD family Fe-S cluster assembly protein K07033 K07033; uncharacterized protein
D PABY_01720 beta-CASP ribonuclease aCPSF1 K07041 K07041; uncharacterized protein
D PABY_00130 hypothetical protein K07045 K07045; uncharacterized protein
D PABY_06200 PIN domain-containing protein K07064 K07064; uncharacterized protein
D PABY_06450 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D PABY_12320 hypothetical protein K07064 K07064; uncharacterized protein
D PABY_13260 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D PABY_13390 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D PABY_13690 hypothetical protein K07064 K07064; uncharacterized protein
D PABY_14040 hypothetical protein K07064 K07064; uncharacterized protein
D PABY_15780 hypothetical protein K07064 K07064; uncharacterized protein
D PABY_18070 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D PABY_19030 PIN domain-containing protein K07064 K07064; uncharacterized protein
D PABY_19270 hypothetical protein K07064 K07064; uncharacterized protein
D PABY_19480 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D PABY_19540 hypothetical protein K07064 K07064; uncharacterized protein
D PABY_19660 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D PABY_24570 hypothetical protein K07064 K07064; uncharacterized protein
D PABY_24590 hypothetical protein K07064 K07064; uncharacterized protein
D PABY_19250 PIN domain-containing protein K07065 K07065; uncharacterized protein
D PABY_01500 Zn-ribbon domain-containing OB-fold protein K07068 K07068; uncharacterized protein
D PABY_23950 Zn-ribbon domain-containing OB-fold protein K07068 K07068; uncharacterized protein
D PABY_16250 nucleotidyltransferase domain-containing protein K07073 K07073; uncharacterized protein
D PABY_02930 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PABY_00030 metallophosphoesterase K07095 K07095; uncharacterized protein
D PABY_17090 hypothetical protein K07096 K07096; uncharacterized protein
D PABY_22010 metallophosphoesterase K07096 K07096; uncharacterized protein
D PABY_18460 hypothetical protein K07097 K07097; uncharacterized protein
D PABY_21800 DHHA1 domain-containing protein K07097 K07097; uncharacterized protein
D PABY_13280 metallophosphoesterase K07098 K07098; uncharacterized protein
D PABY_03810 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D PABY_21030 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D PABY_00620 transcriptional regulator K07108 K07108; uncharacterized protein
D PABY_16550 hypothetical protein K07108 K07108; uncharacterized protein
D PABY_00860 GNAT family N-acetyltransferase K07128 K07128; uncharacterized protein
D PABY_16260 radical SAM protein K07129 K07129; uncharacterized protein
D PABY_19050 hypothetical protein K07131 K07131; uncharacterized protein
D PABY_20790 tRNA-binding protein K07135 K07135; uncharacterized protein
D PABY_05340 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D PABY_21860 hypothetical protein K07158 K07158; uncharacterized protein
D PABY_21740 DUF763 domain-containing protein K09003 K09003; uncharacterized protein
D PABY_23660 hypothetical protein K09120 K09120; uncharacterized protein
D PABY_10770 Mut7-C RNAse domain-containing protein K09122 K09122; uncharacterized protein
D PABY_09500 adenosine-specific kinase K09129 K09129; uncharacterized protein
D PABY_10050 DUF167 domain-containing protein K09131 K09131; uncharacterized protein
D PABY_15420 DUF190 domain-containing protein K09137 K09137; uncharacterized protein
D PABY_22350 TIGR00296 family protein K09141 K09141; uncharacterized protein
D PABY_21790 DUF429 domain-containing protein K09147 K09147; uncharacterized protein
D PABY_07900 DUF424 domain-containing protein K09148 K09148; uncharacterized protein
D PABY_00670 hypothetical protein K09149 K09149; uncharacterized protein
D PABY_03790 DUF460 domain-containing protein K09150 K09150; uncharacterized protein
D PABY_14760 PFL family protein K09157 K09157; uncharacterized protein
D PABY_17260 DUF711 family protein K09157 K09157; uncharacterized protein
D PABY_22530 hypothetical protein K09715 K09715; uncharacterized protein
D PABY_02520 UPF0147 family protein K09721 K09721; uncharacterized protein
D PABY_04030 DUF211 domain-containing protein K09732 K09732; uncharacterized protein
D PABY_06230 RNA-binding domain-containing protein K09736 K09736; uncharacterized protein
D PABY_03270 hypothetical protein K09737 K09737; uncharacterized protein
D PABY_23490 hypothetical protein K09738 K09738; uncharacterized protein
D PABY_02720 hypothetical protein K09742 K09742; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024