+D Transcription factors KO #

  Transcription Factors - Cutibacterium acnes KPA171202

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Stork head/winged helix factors C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG TOX C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family C LysR family D PPA1991 oxidative stress transcriptional regulatory protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator C DeoR family D PPA1010 putative transcriptional regulatory protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D PPA0144 transcriptional regulator, DeoR-family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor C LacI family D PPA0014 putative transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PPA2330 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PPA1555 MalR repressor protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG C GntR family D PPA0676 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D PPA0964 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D PPA0831 putative TetR-family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator C Lrp/AsnC family D PPA1220 putative AsnC-family transcriptional regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D PPA0579 transcriptional regulator MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D PPA2037 putative heat shock transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR C Fur family D PPA0948 metal uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family C CRP/FNR family D PPA0222 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C Rrf2 family C ArsR family C XRE family D PPA1009 possible transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator C PadR family D PPA1635 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator C Other families D PPA0485 repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D PPA1705 putative BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PPA1610 putative transcriptional regulator K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D PPA0620 NAD-dependent aldehyde dehydrogenases K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family D PPA0292 conserved protein K03488 licT; beta-glucoside operon transcriptional antiterminator D PPA1482 putative regulator of sorbitol operon K03491 licR; probable licABCH operon transcriptional regulator C Others D PPA0220 putative regulatory protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D PPA1264 probable transcription factor WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D PPA1694 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D PPA2243 conserved protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D PPA2341 probable chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PPA1292 hypothetical protein, putative transcriptional regulator K23371 sbnI; L-serine kinase (ATP) / ParB family transcriptional regulator, heme-responsive regulator [EC:2.7.1.225] D PPA0357 putative transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D PPA0586 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D PPA1405 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D PPA0915 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D PPA1507 putative transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D PPA1215 putative sugar-binding domain K05346 deoR; deoxyribonucleoside regulator D PPA2306 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D PPA0995 pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D PPA1339 conserved protein, DUF179 K07735 algH; putative transcriptional regulator D PPA0766 putative DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor D PPA1025 putative regulatory protein NrdR K07738 nrdR; transcriptional repressor NrdR D PPA0749 conserved protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 21, 2025 #
Classification taken and modified from TRANSFAC 7.0