+D GENES KO
#
KEGG Orthology (KO) - Cutibacterium acnes HL096PA1
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pach00010]
D PAGK_1405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PAGK_2030 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PAGK_2171 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PAGK_0148 putative phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PAGK_0090 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PAGK_1063 pyrophosphate--fructose-6-phosphate K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D PAGK_1936 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAGK_1924 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PAGK_1316 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAGK_1318 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAGK_1317 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PAGK_0384 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_1324 putative phosphoglycerate K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_0431 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_0565 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAGK_1359 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAGK_1960 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PAGK_1163 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAGK_1436 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PAGK_0927 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAGK_0190 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PAGK_1819 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAGK_1820 2-oxoglutarate ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAGK_0011 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1262 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1868 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1080 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PAGK_1138 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PAGK_1048 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAGK_2018 polyphosphate glucokinase/transcriptional K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D PAGK_1964 hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PAGK_0057 putative glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PAGK_1008 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PAGK_0320 PTS system, glucose/sucrose specific IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PAGK_1449 putative PTS system component IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PAGK_0321 PTS system sugar-specific EII component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:pach00020]
D PAGK_0759 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PAGK_2181 citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D PAGK_1090 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PAGK_1667 isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PAGK_0894 alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D PAGK_0927 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAGK_1819 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAGK_1820 2-oxoglutarate ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAGK_1683 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAGK_1684 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAGK_1965 coenzyme A transferase (putative succinyl-CoA or butyryl-CoA:coenzyme A transferase) K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PAGK_0746 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAGK_1203 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAGK_0747 succinate dehydrogenase/fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAGK_1202 succinate dehydrogenase/fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAGK_0745 succinate dehydrogenase cytochrome B-558 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAGK_1204 putative succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAGK_2201 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PAGK_1669 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAGK_1163 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAGK_1436 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PAGK_0190 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:pach00030]
D PAGK_2030 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PAGK_0619 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PAGK_0617 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PAGK_0655 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PAGK_0590 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PAGK_0953 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PAGK_2226 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PAGK_0471 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PAGK_0595 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PAGK_2232 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PAGK_0938 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PAGK_1957 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PAGK_0016 sugar kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PAGK_0941 ribokinase family sugar kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PAGK_1048 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAGK_0550 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PAGK_0391 KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PAGK_2032 putative aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PAGK_0390 carbohydrate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PAGK_1266 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PAGK_1936 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAGK_1924 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PAGK_2171 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PAGK_0148 putative phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PAGK_0090 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PAGK_1063 pyrophosphate--fructose-6-phosphate K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:pach00040]
D PAGK_2237 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D PAGK_2235 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D PAGK_2236 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D PAGK_2241 beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D PAGK_0506 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAGK_1269 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D PAGK_1268 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D PAGK_1267 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PAGK_2233 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PAGK_0953 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PAGK_2227 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D PAGK_1234 putative zinc-binding sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D PAGK_1508 zinc-binding dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D PAGK_1519 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
C 00051 Fructose and mannose metabolism [PATH:pach00051]
D PAGK_0007 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PAGK_0468 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PAGK_1652 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PAGK_1624 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PAGK_1519 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D PAGK_2171 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PAGK_0148 putative phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PAGK_0090 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PAGK_1063 pyrophosphate--fructose-6-phosphate K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D PAGK_1234 putative zinc-binding sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D PAGK_1508 zinc-binding dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D PAGK_1936 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAGK_1924 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PAGK_1316 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAGK_0595 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PAGK_2232 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PAGK_2136 PTS system, fructose/mannitol specific IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D PAGK_0147 phosphotransferase system K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PAGK_0027 putative phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D PAGK_0376 putative PTS family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PAGK_0692 PTS system, glucitol/sorbitol-specific IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PAGK_0693 PTS system, glucitol/sorbitol-specific IIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D PAGK_0694 PTS system enzyme II sorbitol-specific factor K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:pach00052]
D PAGK_1138 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PAGK_2091 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAGK_2196 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAGK_0065 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAGK_0506 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAGK_1048 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAGK_1405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PAGK_1629 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PAGK_0385 putative PTS system protein K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D PAGK_0021 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PAGK_0377 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PAGK_0386 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PAGK_2171 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PAGK_0148 putative phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PAGK_0090 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PAGK_2240 putative glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:pach00053]
D PAGK_2241 beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D PAGK_0462 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D PAGK_1269 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D PAGK_1268 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D PAGK_1267 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PAGK_2233 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:pach00500]
D PAGK_1012 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PAGK_2240 putative glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PAGK_1251 trehalose synthase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D PAGK_0506 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAGK_1005 PTS cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PAGK_1007 PTS system, lichenan-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PAGK_1006 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PAGK_0057 putative glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PAGK_1008 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PAGK_1489 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PAGK_1042 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PAGK_0078 carbohydrate phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PAGK_1038 putative glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D PAGK_1040 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D PAGK_1538 alpha-amylase 3 K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D PAGK_1611 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PAGK_1041 hypothetical protein K16146 pep2; maltokinase [EC:2.7.1.175]
D PAGK_1039 putative alpha-amylase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D PAGK_1490 putative glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D PAGK_0320 PTS system, glucose/sucrose specific IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PAGK_1449 putative PTS system component IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PAGK_1193 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D PAGK_1192 phosphatase, putative trehalose-6-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D PAGK_1045 trehalose phosphorylase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D PAGK_1048 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAGK_1405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PAGK_2030 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pach00520]
D PAGK_0574 putative beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PAGK_2062 putative beta-N-acetylglucosaminidase precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PAGK_0062 glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PAGK_0320 PTS system, glucose/sucrose specific IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PAGK_1449 putative PTS system component IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PAGK_1453 PTS system, glucose-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PAGK_0501 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PAGK_0493 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PAGK_1010 putative N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D PAGK_1722 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAGK_1727 phosphoglucomutase/phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PAGK_0549 N-acetylglucosamine-1-phosphate K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PAGK_1230 putative UDP-N-acetylglucosamine K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
D PAGK_1013 N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PAGK_0928 UDP-N-acetylglucosamine K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PAGK_1809 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PAGK_1910 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D PAGK_0153 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PAGK_0139 putative acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D PAGK_2217 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D PAGK_0321 PTS system sugar-specific EII component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PAGK_1405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PAGK_2018 polyphosphate glucokinase/transcriptional K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D PAGK_1048 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAGK_0506 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAGK_2091 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAGK_2196 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAGK_0065 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAGK_2030 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PAGK_0007 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PAGK_0468 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PAGK_1652 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PAGK_1624 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PAGK_1489 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:pach00620]
D PAGK_0190 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PAGK_1819 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAGK_1820 2-oxoglutarate ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAGK_1163 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAGK_1436 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PAGK_0927 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAGK_1080 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PAGK_1359 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAGK_1648 putative biotin-dependent acetyl/propionyl-CoA K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PAGK_1965 coenzyme A transferase (putative succinyl-CoA or butyryl-CoA:coenzyme A transferase) K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PAGK_0011 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1262 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1868 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_0709 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D PAGK_0985 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PAGK_0335 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PAGK_1261 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PAGK_1669 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAGK_2201 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PAGK_2242 hypothetical protein K20370 PEPCK; phosphoenolpyruvate carboxykinase (diphosphate) [EC:4.1.1.38]
D PAGK_1960 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PAGK_1214 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pach00630]
D PAGK_1669 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAGK_0759 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PAGK_2181 citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D PAGK_1090 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PAGK_1049 methylmalonyl CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAGK_1648 putative biotin-dependent acetyl/propionyl-CoA K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PAGK_1636 propionyl-CoA carboxylase beta chain K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PAGK_1532 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAGK_1533 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAGK_0097 catalase K03781 katE; catalase [EC:1.11.1.6]
D PAGK_2155 D-isomer specific 2-hydroxyacid dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D PAGK_1457 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_1464 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_0389 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAGK_1386 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PAGK_1384 glycine cleavage system aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAGK_0927 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAGK_1070 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PAGK_1385 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PAGK_2208 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PAGK_0391 KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PAGK_2032 putative aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PAGK_0894 alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D PAGK_1668 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pach00640]
D PAGK_1987 pyruvate dehydrogenase E1 component, alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PAGK_1986 pyruvate dehydrogenase E1 component, beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PAGK_1985 dihydrolipoamide acetyltransferase component of K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PAGK_0927 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAGK_1648 putative biotin-dependent acetyl/propionyl-CoA K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PAGK_1921 oxaloacetate decarboxylase K03416 E2.1.3.1-5S; methylmalonyl-CoA carboxyltransferase 5S subunit [EC:2.1.3.1]
D PAGK_1920 methylmalonyl-CoA carboxyltransferase K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D PAGK_1919 C-terminal component of methylmalonyl-CoA K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D PAGK_1918 oxaloacetate decarboxylase alpha chain K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1]
D PAGK_1636 propionyl-CoA carboxylase beta chain K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PAGK_1049 methylmalonyl CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAGK_1532 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAGK_1533 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAGK_1684 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAGK_1683 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAGK_0478 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PAGK_0011 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1262 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1868 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:pach00650]
D PAGK_0746 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAGK_1203 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAGK_0747 succinate dehydrogenase/fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAGK_1202 succinate dehydrogenase/fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAGK_0745 succinate dehydrogenase cytochrome B-558 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAGK_1204 putative succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAGK_0076 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAGK_1965 coenzyme A transferase (putative succinyl-CoA or butyryl-CoA:coenzyme A transferase) K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PAGK_0190 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PAGK_1819 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAGK_1820 2-oxoglutarate ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAGK_0808 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pach00660]
D PAGK_0808 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PAGK_1684 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAGK_1683 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAGK_0819 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
C 00562 Inositol phosphate metabolism [PATH:pach00562]
D PAGK_1075 CDP-diacylglycerol--glycerol-3-phosphate K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-]
D PAGK_0486 putative myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D PAGK_0485 putative myo-inositol catabolism protein K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D PAGK_0476 thiamine pyrophosphate-requiring enzyme K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D PAGK_0475 putative myo-inositol catabolism protein IolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D PAGK_0473 carbohydrate kinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D PAGK_0478 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PAGK_1316 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pach00190]
D PAGK_1850 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PAGK_1849 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PAGK_1818 NADH dehydrogenase subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PAGK_1817 NADH dehydrogenase subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PAGK_1848 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PAGK_0303 putative NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PAGK_1847 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PAGK_1846 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PAGK_1845 NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PAGK_1844 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PAGK_1843 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PAGK_1816 NADH dehydrogenase subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PAGK_1842 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PAGK_1841 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PAGK_1840 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PAGK_1839 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PAGK_1838 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PAGK_1837 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PAGK_0157 putative NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PAGK_0746 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAGK_1203 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAGK_0747 succinate dehydrogenase/fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAGK_1202 succinate dehydrogenase/fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAGK_0745 succinate dehydrogenase cytochrome B-558 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAGK_1204 putative succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAGK_1417 ubiquinol-cytochrome c reductase iron-sulfur K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PAGK_1418 cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D PAGK_1416 cytochrome c heme-binding subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D PAGK_0620 membrane protein, putative heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PAGK_1426 hypothetical protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D PAGK_1415 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PAGK_1427 cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PAGK_1428 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D PAGK_0622 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAGK_1480 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAGK_0204 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PAGK_0203 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PAGK_0912 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PAGK_0914 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PAGK_0913 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PAGK_0911 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PAGK_0915 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PAGK_0908 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PAGK_0910 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PAGK_0909 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PAGK_0286 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PAGK_0364 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PAGK_0966 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pach00710]
D PAGK_1317 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PAGK_1318 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAGK_1936 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAGK_1924 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PAGK_2226 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PAGK_0595 ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PAGK_2232 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PAGK_1316 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAGK_0953 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PAGK_0471 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PAGK_1960 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PAGK_1669 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:pach00720]
D PAGK_0190 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PAGK_1960 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PAGK_1669 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAGK_2201 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PAGK_0746 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAGK_1203 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAGK_0747 succinate dehydrogenase/fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAGK_1202 succinate dehydrogenase/fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAGK_0745 succinate dehydrogenase cytochrome B-558 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAGK_1204 putative succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAGK_1683 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAGK_1684 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAGK_1819 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PAGK_1820 2-oxoglutarate ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PAGK_1667 isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PAGK_1090 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PAGK_2083 hypothetical protein K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D PAGK_1049 methylmalonyl CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAGK_1532 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAGK_1533 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAGK_0045 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PAGK_1672 methylenetetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
C 00680 Methane metabolism [PATH:pach00680]
D PAGK_0389 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAGK_0565 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAGK_1669 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAGK_1936 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAGK_1924 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PAGK_2171 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PAGK_0148 putative phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PAGK_0090 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PAGK_0384 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_1324 putative phosphoglycerate K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_0431 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_0882 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAGK_0500 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PAGK_1963 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pach00910]
D PAGK_0529 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PAGK_0528 nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PAGK_0527 nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PAGK_0525 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PAGK_0092 hypothetical protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D PAGK_1889 nitric-oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D PAGK_0853 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PAGK_0665 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PAGK_1457 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_1464 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_1019 large subunit of NADH-dependent glutamate K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PAGK_1018 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PAGK_1545 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:pach00920]
D PAGK_1694 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PAGK_1191 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PAGK_0934 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PAGK_0535 anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D PAGK_0534 anaerobic dimethyl sulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pach00061]
D PAGK_1648 putative biotin-dependent acetyl/propionyl-CoA K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PAGK_1171 acyl carrier protein K02078 acpP; acyl carrier protein
D PAGK_1169 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PAGK_1170 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PAGK_1172 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PAGK_1739 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAGK_0587 putative long-chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAGK_2139 putative long-chain-fatty-acid--CoA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D PAGK_0587 putative long-chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAGK_2139 putative long-chain-fatty-acid--CoA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pach00561]
D PAGK_2208 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PAGK_1080 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PAGK_1863 hypothetical protein K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D PAGK_1864 hypothetical protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D PAGK_1865 PTS protein, putative dihydroxyacetone kinase K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D PAGK_2213 glycerol kinase 2 K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PAGK_0780 putative hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D PAGK_1403 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAGK_2142 putative 1-acyl-sn-glycerol-3-phosphate K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAGK_0820 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAGK_1999 triacylglycerol lipase precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:pach00564]
D PAGK_2224 glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PAGK_2154 anaerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PAGK_2153 anaerobic glycerol-3-phosphate dehydrogenase K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D PAGK_2152 sn-glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D PAGK_1403 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAGK_2142 putative 1-acyl-sn-glycerol-3-phosphate K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAGK_0820 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAGK_0929 putative glycerophosphoryl diester K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PAGK_0661 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PAGK_1146 phosphatidylglycerophosphate synthase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PAGK_1690 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PAGK_1074 CDP-diacylglycerol-glycerol-3-phosphate K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D PAGK_0690 arabinose operon protein AraM K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D PAGK_2228 L-arabinose utilization protein, glycerol K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:pach00600]
D PAGK_1629 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PAGK_1443 sialidase A precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PAGK_1444 sialidase B K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PAGK_0621 sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PAGK_0062 glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D PAGK_1123 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pach00230]
D PAGK_1048 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAGK_0550 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PAGK_1884 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PAGK_1906 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PAGK_1677 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PAGK_1891 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PAGK_1901 phosphoribosylaminoimidazole-succinocarboxamide K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PAGK_1900 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAGK_1883 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PAGK_1631 phosphoribosylaminoimidazole carboxylase ATPase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PAGK_1630 phosphoribosylaminoimidazole carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PAGK_1905 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PAGK_1676 phosphoribosylaminoimidazolecarboxamide K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PAGK_0989 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PAGK_1870 sugar phosphatase/hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PAGK_1651 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PAGK_1366 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PAGK_1972 inosine-uridine preferring nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D PAGK_0289 putative hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PAGK_1696 inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAGK_1697 IMP dehydrogenase / PAKP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAGK_1311 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAGK_1602 putative nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PAGK_1693 bifunctional PAKP synthase/glutamine K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAGK_1420 inositol-5-monophosphate dehydrogenase K26110 guaB1; GMP reductase [EC:1.7.1.7]
D PAGK_0962 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PAGK_1127 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAGK_2015 ribonucleotide-diphosphate reductase subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAGK_2016 ribonucleotide-diphosphate reductase subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PAGK_2036 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PAGK_1199 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PAGK_0987 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PAGK_0568 Ppx/GppA phosphatase family hydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PAGK_1907 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PAGK_2182 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D PAGK_1790 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PAGK_1756 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAGK_1076 putative HIT family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D PAGK_1545 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:pach00240]
D PAGK_1153 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAGK_1154 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PAGK_1156 aspartate carbamoyltransferase catalytic K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PAGK_1155 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PAGK_1151 dihydroorotate dehydrogenase B, catalytic K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D PAGK_1152 dihydroorotate dehydrogenase electron transfer K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D PAGK_0189 dihydroorotate dehydrogenase 2 K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D PAGK_1149 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PAGK_1150 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PAGK_0659 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PAGK_1311 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAGK_1638 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PAGK_0791 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PAGK_0943 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PAGK_1654 putative uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PAGK_1870 sugar phosphatase/hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PAGK_2082 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PAGK_1157 pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PAGK_1790 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PAGK_1659 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PAGK_2036 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PAGK_1127 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAGK_2015 ribonucleotide-diphosphate reductase subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAGK_2016 ribonucleotide-diphosphate reductase subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PAGK_1866 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PAGK_0273 putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PAGK_1097 deoxyuridine 5'-triphosphate K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PAGK_0813 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D PAGK_1102 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PAGK_1601 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PAGK_2064 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pach00250]
D PAGK_0387 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PAGK_2172 hypothetical protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PAGK_2183 hypothetical protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PAGK_0094 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PAGK_2098 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PAGK_0835 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PAGK_1907 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PAGK_1905 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PAGK_1156 aspartate carbamoyltransferase catalytic K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PAGK_0076 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAGK_1019 large subunit of NADH-dependent glutamate K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PAGK_1018 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PAGK_0853 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PAGK_0665 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PAGK_1509 NAD-dependent aldehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PAGK_1457 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_1464 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_1153 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAGK_1154 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PAGK_1900 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAGK_1722 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAGK_1884 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pach00260]
D PAGK_2047 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAGK_0340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAGK_0897 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAGK_0899 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PAGK_0898 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAGK_0389 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAGK_2208 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PAGK_0384 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_1324 putative phosphoglycerate K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_0431 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_0882 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAGK_0500 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PAGK_1963 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PAGK_0418 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PAGK_0417 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PAGK_0281 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PAGK_1386 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PAGK_1384 glycine cleavage system aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAGK_0927 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAGK_1070 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PAGK_1385 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PAGK_1497 glycine amidinotransferase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D PAGK_0411 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PAGK_1021 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PAGK_1022 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pach00270]
D PAGK_1694 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PAGK_1191 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PAGK_0959 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PAGK_1060 5`-methylthioadenosine/S-adenosylhomocysteine K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PAGK_1366 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PAGK_0467 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PAGK_2047 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAGK_0340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAGK_0897 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAGK_0934 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PAGK_0812 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAGK_0011 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1262 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1868 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1669 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAGK_0411 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PAGK_0882 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAGK_0500 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pach00280]
D PAGK_0812 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAGK_1987 pyruvate dehydrogenase E1 component, alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PAGK_1986 pyruvate dehydrogenase E1 component, beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PAGK_1985 dihydrolipoamide acetyltransferase component of K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PAGK_0927 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAGK_1648 putative biotin-dependent acetyl/propionyl-CoA K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PAGK_1636 propionyl-CoA carboxylase beta chain K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PAGK_1049 methylmalonyl CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PAGK_1532 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAGK_1533 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAGK_0478 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pach00290]
D PAGK_0819 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PAGK_0808 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PAGK_0809 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PAGK_0812 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAGK_1214 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pach00300]
D PAGK_0897 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAGK_2047 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAGK_0340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAGK_1487 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAGK_1911 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAGK_0707 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PAGK_1499 transferase, putative tetrahydrodipicolinate K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PAGK_0834 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PAGK_1493 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PAGK_1133 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PAGK_0896 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PAGK_2245 aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PAGK_1375 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PAGK_1374 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pach00310]
D PAGK_0927 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAGK_0076 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAGK_2185 oxidoreductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
C 00220 Arginine biosynthesis [PATH:pach00220]
D PAGK_1546 ornithine carbamoyltransferase, catabolic K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PAGK_2098 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PAGK_0835 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PAGK_1547 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D PAGK_1900 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAGK_1457 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_1464 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_1153 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAGK_1154 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PAGK_1545 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PAGK_0853 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PAGK_0665 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PAGK_0832 glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PAGK_0833 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PAGK_0831 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PAGK_0834 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:pach00330]
D PAGK_1497 glycine amidinotransferase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D PAGK_0281 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PAGK_0341 putative delta-1-pyrroline-5-carboxylate K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PAGK_0338 putative proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D PAGK_1509 NAD-dependent aldehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PAGK_1301 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PAGK_1300 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PAGK_1222 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PAGK_2185 oxidoreductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
C 00340 Histidine metabolism [PATH:pach00340]
D PAGK_0765 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PAGK_0764 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D PAGK_1027 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D PAGK_0997 ATP-dependent helicase HrpA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D PAGK_0998 imidazole glycerol phosphate synthase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PAGK_0805 imidazole glycerol phosphate synthase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PAGK_0999 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PAGK_0031 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAGK_1000 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAGK_0883 putative inositol monophosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D PAGK_1001 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PAGK_2067 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PAGK_2063 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D PAGK_2066 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D PAGK_0281 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:pach00350]
D PAGK_0031 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAGK_1000 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAGK_0281 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PAGK_0076 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAGK_1327 mycothiol-dependent maleylpyruvate isomerase K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
C 00360 Phenylalanine metabolism [PATH:pach00360]
D PAGK_0281 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PAGK_0031 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAGK_1000 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAGK_0638 NADH:flavin oxidoreductase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
D PAGK_0633 putative dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:pach00380]
D PAGK_0927 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAGK_1083 tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D PAGK_0281 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PAGK_0097 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pach00400]
D PAGK_1401 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PAGK_0969 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PAGK_1614 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PAGK_0970 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PAGK_0886 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PAGK_0971 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PAGK_0997 ATP-dependent helicase HrpA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D PAGK_1023 indole-3-glycerol phosphate synthase 1 K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PAGK_1021 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PAGK_1022 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PAGK_1695 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D PAGK_0031 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAGK_1000 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pach00410]
D PAGK_2064 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PAGK_0478 methylmalonic acid semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:pach00430]
D PAGK_2172 hypothetical protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PAGK_2183 hypothetical protein K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PAGK_0853 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pach00450]
D PAGK_0635 putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PAGK_2218 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PAGK_1657 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pach00460]
D PAGK_0387 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PAGK_0389 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pach00470]
D PAGK_2194 alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D PAGK_0821 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAGK_2246 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAGK_1900 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAGK_1604 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PAGK_1372 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PAGK_1133 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PAGK_0896 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PAGK_2185 oxidoreductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
D PAGK_2191 amino acid racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
D PAGK_2188 D-ornithine aminomutase S component K17899 oraS; D-ornithine 4,5-aminomutase subunit alpha [EC:5.4.3.5]
C 00480 Glutathione metabolism [PATH:pach00480]
D PAGK_0309 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PAGK_1435 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PAGK_1893 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PAGK_1667 isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PAGK_0590 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PAGK_0619 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:pach00515]
D PAGK_0542 putative dolichyl-phosphate-mannose-protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:pach00514]
D PAGK_0542 putative dolichyl-phosphate-mannose-protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pach00511]
D PAGK_1443 sialidase A precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PAGK_1444 sialidase B K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PAGK_0621 sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PAGK_1629 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PAGK_0062 glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PAGK_0058 glycosyl hydrolase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D PAGK_0723 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D PAGK_1120 beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D PAGK_1521 glycosyl hydrolase, putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:pach00542]
D PAGK_0905 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pach00541]
D PAGK_0506 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAGK_0065 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAGK_2197 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAGK_0007 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PAGK_0468 phosphomannose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PAGK_1652 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PAGK_1624 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PAGK_0549 N-acetylglucosamine-1-phosphate K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PAGK_0153 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PAGK_0139 putative acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:pach00550]
D PAGK_0928 UDP-N-acetylglucosamine K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PAGK_1809 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PAGK_1369 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PAGK_1372 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PAGK_1375 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PAGK_0821 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAGK_2246 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAGK_1374 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PAGK_2127 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PAGK_1373 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PAGK_1370 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PAGK_1376 cell division protein FtsI/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PAGK_0213 putative penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D PAGK_0287 putative carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PAGK_1016 hypothetical protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D PAGK_1583 putative UDP-N-acetylmuramyl tripeptide K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D PAGK_1584 putative cobyric acid synthase CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:pach00552]
D PAGK_2127 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PAGK_0905 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PAGK_2089 membrane-associated protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pach00543]
D PAGK_0905 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PAGK_1694 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PAGK_1626 succinoglycan biosynthesis protein ExoA K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pach00730]
D PAGK_0110 thiamine-phosphate pyrophosphorylase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PAGK_1037 aminotransferase class V, putative cysteine K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAGK_0539 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PAGK_1089 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PAGK_0537 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PAGK_1264 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PAGK_0112 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PAGK_1263 thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PAGK_0823 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PAGK_0885 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PAGK_1756 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAGK_0671 putative transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:pach00740]
D PAGK_1679 riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PAGK_1681 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PAGK_1678 riboflavin synthase subunit beta K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PAGK_1680 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PAGK_0060 putative hydrolase K20884 FHY; riboflavin kinase / FMN hydrolase [EC:2.7.1.26 3.1.3.102]
D PAGK_0704 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PAGK_1264 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:pach00750]
D PAGK_1642 phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PAGK_1575 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D PAGK_0500 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PAGK_0898 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAGK_1189 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D PAGK_1188 glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pach00760]
D PAGK_1609 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PAGK_1651 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PAGK_1870 sugar phosphatase/hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PAGK_1299 nicotinic acid mononucleotide K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PAGK_0864 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PAGK_2170 NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D PAGK_1145 putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PAGK_1159 pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PAGK_2070 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PAGK_0786 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PAGK_1504 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PAGK_1503 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D PAGK_0076 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pach00770]
D PAGK_0808 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PAGK_0809 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PAGK_1168 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PAGK_1725 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D PAGK_0960 phosphopantothenoylcysteine K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PAGK_0714 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PAGK_1345 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PAGK_1721 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PAGK_0812 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAGK_2064 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:pach00780]
D PAGK_1172 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PAGK_1739 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAGK_1785 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PAGK_1187 adenosylmethionine-8-amino-7-oxononanoate K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PAGK_1186 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PAGK_0774 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PAGK_1634 putative BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pach00785]
D PAGK_1437 lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PAGK_1440 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PAGK_0927 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAGK_1163 pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAGK_1436 dihydrolipoamide acyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PAGK_0894 alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D PAGK_1987 pyruvate dehydrogenase E1 component, alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PAGK_1986 pyruvate dehydrogenase E1 component, beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PAGK_1985 dihydrolipoamide acetyltransferase component of K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PAGK_1386 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PAGK_1384 glycine cleavage system aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAGK_1070 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PAGK_1385 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pach00790]
D PAGK_0291 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PAGK_0299 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PAGK_0300 putative hydroxymethyldihydropteridine K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PAGK_0298 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PAGK_1600 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PAGK_1313 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PAGK_1679 riboflavin biosynthesis protein RibA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PAGK_1890 para-aminobenzoate synthase K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D PAGK_2165 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PAGK_0520 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PAGK_0516 molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PAGK_0518 molybdopterin synthase MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PAGK_0512 putative molybdopterin biosynthesis enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PAGK_0517 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:pach00670]
D PAGK_1600 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PAGK_0045 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PAGK_1672 methylenetetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PAGK_0389 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAGK_1677 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PAGK_1676 phosphoribosylaminoimidazolecarboxamide K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PAGK_0957 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PAGK_1384 glycine cleavage system aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAGK_1601 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PAGK_1668 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PAGK_0511 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pach00860]
D PAGK_0798 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAGK_1788 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAGK_0330 glutamyl-tRNA reductase, HemA K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PAGK_0324 glutamate-1-semialdehyde 2,1-aminomutase, HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PAGK_0325 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PAGK_0327 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PAGK_0326 uroporphyrinogen-III synthase, HemD K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PAGK_0328 putative protoporphyrinogen oxidase, HemY K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D PAGK_1988 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D PAGK_0331 ferrochelatase, HemH K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PAGK_0344 uroporphyrinogen-III synthase, HemD K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D PAGK_0454 uroporphyrinogen III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PAGK_1989 molybdenum cofactor biosynthesis K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D PAGK_0620 membrane protein, putative heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PAGK_0622 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAGK_1480 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAGK_0438 cobalamin synthesis protein, fusion CysG+CbiX K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D PAGK_0435 tetrapyrrole methylase, putative precorrin-2 K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D PAGK_0437 tetrapyrrole methylase, putative CbiE/G/H K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D PAGK_0436 tetrapyrrole methylase, putative precorrin-3 K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D PAGK_1835 precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D PAGK_0455 cobalt-precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D PAGK_0451 precorrin 8 decarboxylase CbiT K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D PAGK_0445 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D PAGK_0453 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D PAGK_0102 cobalamin biosynthesis protein CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D PAGK_1340 CobN/magnesium chelatase subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D PAGK_0917 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PAGK_0452 cob(I)yrinic acid a,c-diamide K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PAGK_0433 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PAGK_0432 cobalamin biosynthesis CobD/CbiB protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PAGK_0457 putative cobalamin-5-phosphate synthase, CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PAGK_0456 phosphoribosyltransferase, cobalamin K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PAGK_1201 phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PAGK_0101 magnesium-chelatase 67 kDa subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D PAGK_1342 magnesium-chelatase subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D PAGK_0100 magnesium-chelatase subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D PAGK_1343 magnesium-chelatase subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D PAGK_2241 beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pach00130]
D PAGK_1856 ubiquinone/menaquinone biosynthesis K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PAGK_1247 isochorismate synthetase, enterochelin K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PAGK_1853 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PAGK_1248 menaquinone biosynthesis protein K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PAGK_1249 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PAGK_1245 O-succinylbenzoic acid-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PAGK_1244 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PAGK_1861 1,4-dihydroxy-2-naphthoate K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pach00900]
D PAGK_1089 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PAGK_0668 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PAGK_0374 2-C-methyl-D-erythritol 4-phosphate K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PAGK_0546 4-diphosphocytidyl-2-C-methyl-D-erythritol K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PAGK_0375 2-C-methyl-D-erythritol 2,4-cyclodiphosphate K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PAGK_0672 4-hydroxy-3-methylbut-2-en-1-yl diphosphate K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PAGK_1558 4-hydroxy-3-methylbut-2-enyl diphosphate K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PAGK_2009 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PAGK_1395 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PAGK_1566 undecaprenyl pyrophosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PAGK_2226 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D PAGK_2197 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D PAGK_1247 isochorismate synthetase, enterochelin K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PAGK_1853 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D PAGK_0284 acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:pach00332]
D PAGK_1301 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PAGK_1300 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pach00261]
D PAGK_2047 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAGK_0340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAGK_1487 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAGK_1911 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAGK_0707 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pach00521]
D PAGK_1405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PAGK_1048 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAGK_0486 putative myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D PAGK_2197 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PAGK_1405 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D PAGK_2197 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis
D PAGK_0031 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAGK_1000 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D PAGK_1169 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PAGK_1739 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PAGK_1171 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D PAGK_0959 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D PAGK_2191 amino acid racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pach03020]
D PAGK_1801 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PAGK_1800 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PAGK_1749 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PAGK_0961 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D PAGK_0490 superfamily II DNA/RNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pach03010]
D PAGK_1352 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PAGK_0657 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PAGK_1777 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PAGK_1750 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PAGK_1766 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PAGK_2134 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PAGK_1795 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PAGK_1769 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PAGK_1728 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PAGK_1784 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PAGK_1751 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PAGK_1796 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PAGK_1752 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PAGK_1770 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PAGK_2059 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PAGK_0705 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PAGK_0741 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PAGK_1774 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PAGK_2132 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PAGK_1779 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PAGK_1252 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PAGK_1804 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PAGK_1780 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PAGK_1783 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PAGK_1782 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PAGK_1771 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PAGK_1768 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PAGK_1802 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PAGK_2131 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PAGK_1803 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PAGK_1805 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PAGK_1729 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PAGK_1773 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PAGK_1764 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PAGK_1776 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PAGK_1748 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PAGK_1767 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PAGK_0748 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PAGK_0770 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PAGK_1307 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PAGK_1778 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PAGK_1781 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PAGK_1772 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PAGK_0554 ribosomal L25P family protein K02897 RP-L25; large subunit ribosomal protein L25
D PAGK_1306 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PAGK_2057 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PAGK_1775 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PAGK_1765 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PAGK_0901 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PAGK_2056 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PAGK_0729 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PAGK_2060 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PAGK_1812 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PAGK_2058 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PAGK_0769 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PAGK_1753 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PAGK_2020 hypothetical protein K02919 RP-L36; large subunit ribosomal protein L36
D PAGK_2301 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAGK_2274 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAGK_2282 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAGK_2275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAGK_2283 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAGK_2300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAGK_2276 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAGK_2284 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAGK_2299 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pach00970]
D PAGK_2297 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAGK_2271 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAGK_2266 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAGK_2270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAGK_2289 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAGK_2278 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAGK_2316 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAGK_2296 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PAGK_2310 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PAGK_2293 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PAGK_2272 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PAGK_2285 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PAGK_2286 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PAGK_2309 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PAGK_2292 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAGK_2280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAGK_2312 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAGK_2277 tRNA-His K14226 tRNA-His; tRNA His
D PAGK_2265 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PAGK_2273 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAGK_2313 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAGK_2281 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAGK_2298 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAGK_2303 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAGK_2302 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PAGK_2308 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PAGK_2295 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAGK_2288 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAGK_2305 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAGK_2311 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PAGK_2290 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAGK_2279 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAGK_2314 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAGK_2318 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAGK_2267 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAGK_2315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAGK_2317 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAGK_2268 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAGK_2306 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAGK_2269 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAGK_2304 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PAGK_2307 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PAGK_2287 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAGK_2294 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAGK_2291 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAGK_0798 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAGK_1788 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAGK_1030 aspartyl/glutamyl-tRNA amidotransferase subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PAGK_1029 aspartyl/glutamyl-tRNA amidotransferase subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PAGK_1031 glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PAGK_1789 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PAGK_0975 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAGK_0978 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAGK_1206 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAGK_1077 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAGK_2119 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAGK_0397 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAGK_1657 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAGK_0957 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PAGK_0614 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAGK_1257 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAGK_0246 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAGK_0209 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PAGK_0598 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PAGK_2026 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAGK_0679 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAGK_0984 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAGK_0772 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAGK_0773 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAGK_0777 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAGK_0855 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pach03060]
D PAGK_1757 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAGK_1807 putative SecE/Sec61-gamma subunit of protein K03073 secE; preprotein translocase subunit SecE
D PAGK_1315 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAGK_0991 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PAGK_0990 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PAGK_0992 translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PAGK_2261 putative inner membrane protein translocase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAGK_0850 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAGK_0739 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PAGK_0737 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D PAGK_0802 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PAGK_1486 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PAGK_0803 Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC
D PAGK_0749 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PAGK_1361 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pach04122]
D PAGK_1037 aminotransferase class V, putative cysteine K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAGK_1036 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PAGK_0518 molybdopterin synthase MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PAGK_0520 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PAGK_0519 putative molybdopterin converting factor K03636 moaD; sulfur-carrier protein
D PAGK_0536 putative molybdopterin biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PAGK_0516 molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PAGK_0538 hypothetical protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome [PATH:pach03050]
D PAGK_0945 20S proteasome alpha-subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PAGK_0946 20S proteasome beta-subunit precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:pach03018]
D PAGK_1308 putative ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D PAGK_0565 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAGK_0706 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PAGK_1231 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PAGK_0900 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PAGK_1139 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PAGK_0710 metal dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PAGK_2171 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PAGK_1952 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAGK_0470 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAGK_1701 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAGK_0364 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PAGK_0966 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PAGK_2210 putative RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pach03030]
D PAGK_1656 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAGK_1003 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAGK_0234 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PAGK_0274 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAGK_1253 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAGK_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAGK_2148 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PAGK_1197 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PAGK_0582 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_2133 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_1658 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PAGK_0750 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PAGK_1355 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAGK_0593 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pach03410]
D PAGK_0255 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PAGK_1572 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PAGK_0323 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PAGK_2151 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PAGK_0731 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PAGK_0596 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PAGK_0918 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PAGK_1813 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PAGK_2140 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PAGK_1355 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAGK_0593 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pach03420]
D PAGK_0561 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PAGK_1326 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PAGK_1330 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PAGK_1322 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PAGK_0863 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAGK_0868 putative DNA helicase II-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAGK_1685 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAGK_1355 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAGK_0593 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PAGK_0490 superfamily II DNA/RNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:pach03430]
D PAGK_0863 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAGK_0868 putative DNA helicase II-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAGK_1685 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAGK_1561 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PAGK_1562 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PAGK_0582 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_2133 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_1003 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAGK_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAGK_0234 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PAGK_1253 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAGK_0274 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAGK_1656 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAGK_0593 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:pach03440]
D PAGK_0582 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_2133 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_0004 recombination protein F K03629 recF; DNA replication and repair protein RecF
D PAGK_1211 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PAGK_0236 putative recombination protein RecR K06187 recR; recombination protein RecR
D PAGK_1141 RecA protein K03553 recA; recombination protein RecA
D PAGK_1355 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAGK_0994 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PAGK_0993 Holliday junction DNA helicase B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PAGK_0995 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PAGK_0711 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PAGK_0866 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PAGK_0867 exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PAGK_0865 exonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PAGK_1003 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAGK_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAGK_0234 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PAGK_1253 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAGK_0274 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAGK_1656 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAGK_0958 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pach03250]
D PAGK_1409 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pach02010]
D PAGK_0522 putative molybdate-binding protein precursor K02020 modA; molybdate transport system substrate-binding protein
D PAGK_0523 ABC transporter, putative molybdenum transport K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PAGK_0703 substrate binding component of glycine/betaine K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PAGK_1930 periplasmic binding protein of proline/glycine K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PAGK_0702 glycine betaine transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D PAGK_0701 putative glycine betaine/proline ABC K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PAGK_0419 putative substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D PAGK_0420 ABC transporter-associated permease K05846 opuBD; osmoprotectant transport system permease protein
D PAGK_0421 ABC transporter-associated permease K05846 opuBD; osmoprotectant transport system permease protein
D PAGK_0422 putative ABC transporter ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PAGK_0409 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAGK_0629 putative periplasmic maltose-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PAGK_0628 maltose transport system permease protein MalF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAGK_0627 maltose transport system permease protein MalG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAGK_1585 putative sugar-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PAGK_0084 periplasmic protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D PAGK_0085 putative permease protein K10201 ngcF; N-acetylglucosamine transport system permease protein
D PAGK_0086 permease protein K10202 ngcG; N-acetylglucosamine transport system permease protein
D PAGK_0055 sugar-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D PAGK_0054 transport permease K10241 cebF; cellobiose transport system permease protein
D PAGK_0053 sugar transport permease BglB K10242 cebG; cellobiose transport system permease protein
D PAGK_1524 putative sugar binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D PAGK_0727 solute-binding protein of transport system K17244 chiE; putative chitobiose transport system substrate-binding protein
D PAGK_1523 putative sugar transport protein K17245 chiF; putative chitobiose transport system permease protein
D PAGK_0726 transport system permease K17245 chiF; putative chitobiose transport system permease protein
D PAGK_1522 putative transport system permease protein K17246 chiG; putative chitobiose transport system permease protein
D PAGK_0725 transport system permease K17246 chiG; putative chitobiose transport system permease protein
D PAGK_1663 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PAGK_1661 ABC transporter associated permease K23535 nupB; general nucleoside transport system permease protein
D PAGK_1660 ABC transporter associated permease K23536 nupC; general nucleoside transport system permease protein
D PAGK_1662 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PAGK_1880 extracellular solute-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PAGK_1879 binding-protein-dependent transport permease K17316 gtsB; glucose/mannose transport system permease protein
D PAGK_1878 binding-protein-dependent transport permease K17317 gtsC; glucose/mannose transport system permease protein
D PAGK_0015 periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PAGK_0014 ribose ABC transporter K10440 rbsC; ribose transport system permease protein
D PAGK_0013 ABC transporter protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PAGK_0017 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D PAGK_0362 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PAGK_0361 putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D PAGK_0360 phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D PAGK_0359 phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PAGK_1687 outer membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PAGK_1689 ABC transporter associated permease K02072 metI; D-methionine transport system permease protein
D PAGK_1688 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PAGK_2051 putative peptide transport system secreted K15580 oppA; oligopeptide transport system substrate-binding protein
D PAGK_2052 putative peptide ABC transporter, permease K15581 oppB; oligopeptide transport system permease protein
D PAGK_2053 putative peptide ABC transporter, permease K15582 oppC; oligopeptide transport system permease protein
D PAGK_2054 putative peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PAGK_2055 putative peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAGK_1761 extracellular solute-binding transport protein K13889 gsiB; glutathione transport system substrate-binding protein
D PAGK_0447 cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D PAGK_0446 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D PAGK_0448 cobalt transport protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D PAGK_0449 membrane associated cobalt transport protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PAGK_0781 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D PAGK_0783 cobalt permease-related transporter K16783 bioN; biotin transport system permease protein
D PAGK_0782 ABC-type transporter, ATPase component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D PAGK_1736 ABC transporter-associated permease K16785 ecfT; energy-coupling factor transport system permease protein
D PAGK_0829 cell division protein K09811 ftsX; cell division transport system permease protein
D PAGK_0828 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PAGK_1978 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D PAGK_1977 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D PAGK_0207 ABC-type transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PAGK_0206 putative ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PAGK_0201 transport ATP-binding protein, CydCD K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PAGK_0202 transport ATP-binding protein, CydCD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PAGK_0122 ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:pach02060]
D PAGK_0372 putative phosphoenolpyruvate-protein kinase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PAGK_0691 PTS HPr component K02784 ptsH; phosphocarrier protein HPr
D PAGK_0146 hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D PAGK_0373 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PAGK_0320 PTS system, glucose/sucrose specific IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PAGK_1449 putative PTS system component IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PAGK_0321 PTS system sugar-specific EII component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PAGK_1453 PTS system, glucose-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PAGK_1012 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PAGK_1044 phosphoenolpyruvate sugar phosphotransferase K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PAGK_1005 PTS cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PAGK_1007 PTS system, lichenan-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PAGK_1006 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PAGK_0376 putative PTS family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PAGK_0692 PTS system, glucitol/sorbitol-specific IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PAGK_0693 PTS system, glucitol/sorbitol-specific IIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D PAGK_0694 PTS system enzyme II sorbitol-specific factor K02783 srlA; glucitol/sorbitol PTS system EIIC component
D PAGK_0385 putative PTS system protein K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D PAGK_0021 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PAGK_0377 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PAGK_0386 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PAGK_0462 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D PAGK_0147 phosphotransferase system K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PAGK_2136 PTS system, fructose/mannitol specific IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
C 03070 Bacterial secretion system [PATH:pach03070]
D PAGK_0991 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PAGK_0990 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PAGK_1807 putative SecE/Sec61-gamma subunit of protein K03073 secE; preprotein translocase subunit SecE
D PAGK_1315 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAGK_1757 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAGK_0992 translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PAGK_2261 putative inner membrane protein translocase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAGK_0850 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAGK_0737 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D PAGK_0739 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PAGK_0802 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PAGK_1486 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PAGK_0803 Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pach02020]
D PAGK_0381 putative sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PAGK_0380 response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PAGK_0362 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PAGK_0118 two-component sensor, KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PAGK_0119 two-component response regulator, KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PAGK_0115 potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D PAGK_0116 potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D PAGK_0117 potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D PAGK_0622 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAGK_1480 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAGK_2007 putative two-component system sensor kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D PAGK_2006 putative two-component response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D PAGK_2216 trypsin-like serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D PAGK_0846 signal transduction histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D PAGK_0845 putative response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D PAGK_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PAGK_1834 citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D PAGK_0335 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PAGK_1261 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PAGK_0528 nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PAGK_0527 nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PAGK_0525 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PAGK_0526 nitrate reductase delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D PAGK_0430 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D PAGK_0262 putative secretory protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PAGK_0037 secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PAGK_2362 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PAGK_0263 hypothetical protein K12510 tadB; tight adherence protein B
D PAGK_0039 membrane associated protein K12511 tadC; tight adherence protein C
D PAGK_1457 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_1464 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_0254 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PAGK_0204 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PAGK_0203 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PAGK_2004 low molecular weight K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PAGK_0153 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pach02024]
D PAGK_0467 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PAGK_1401 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PAGK_0119 two-component response regulator, KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PAGK_0205 putative aminoacid permease K20265 gadC; glutamate:GABA antiporter
D PAGK_0587 putative long-chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAGK_2139 putative long-chain-fatty-acid--CoA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAGK_0254 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PAGK_1681 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PAGK_2051 putative peptide transport system secreted K15580 oppA; oligopeptide transport system substrate-binding protein
D PAGK_2052 putative peptide ABC transporter, permease K15581 oppB; oligopeptide transport system permease protein
D PAGK_2053 putative peptide ABC transporter, permease K15582 oppC; oligopeptide transport system permease protein
D PAGK_2054 putative peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PAGK_2055 putative peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAGK_0877 ABC transporter, substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAGK_0716 bacterial extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAGK_0878 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAGK_0879 permease protein of oligopeptide ABC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAGK_0719 ABC-type dipeptide/oligopeptide/nickel K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAGK_0718 putative peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAGK_0880 putative ATP-binding ABC transporter protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAGK_0717 putative peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAGK_0881 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAGK_2261 putative inner membrane protein translocase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAGK_1530 serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D PAGK_1807 putative SecE/Sec61-gamma subunit of protein K03073 secE; preprotein translocase subunit SecE
D PAGK_1315 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAGK_1757 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAGK_0992 translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PAGK_0850 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAGK_0737 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D PAGK_0739 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D PAGK_0015 periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly
D PAGK_1121 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PAGK_0565 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pach04980]
D PAGK_0917 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PAGK_1531 arginine/ornithine transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D PAGK_1532 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PAGK_1533 methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pach01501]
D PAGK_0574 putative beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PAGK_2062 putative beta-N-acetylglucosaminidase precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PAGK_2051 putative peptide transport system secreted K15580 oppA; oligopeptide transport system substrate-binding protein
D PAGK_2052 putative peptide ABC transporter, permease K15581 oppB; oligopeptide transport system permease protein
D PAGK_2053 putative peptide ABC transporter, permease K15582 oppC; oligopeptide transport system permease protein
D PAGK_2054 putative peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PAGK_2055 putative peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAGK_1376 cell division protein FtsI/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pach01502]
D PAGK_0821 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAGK_2246 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAGK_2194 alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D PAGK_1374 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PAGK_1373 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PAGK_1370 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D PAGK_1409 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pach01000]
C 01001 Protein kinases [BR:pach01001]
D PAGK_0212 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PAGK_1398 serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PAGK_0575 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PAGK_2212 serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PAGK_0381 putative sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PAGK_0118 two-component sensor, KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PAGK_2007 putative two-component system sensor kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D PAGK_0846 signal transduction histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D PAGK_0890 sensory transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pach01009]
D PAGK_2171 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PAGK_0215 putative protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D PAGK_0860 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D PAGK_1963 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pach01002]
D PAGK_1361 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PAGK_2347 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PAGK_1693 bifunctional PAKP synthase/glutamine K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAGK_1406 NPL/P60 family secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PAGK_1877 putative cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PAGK_2351 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PAGK_1884 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PAGK_1019 large subunit of NADH-dependent glutamate K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PAGK_1722 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAGK_2050 putative intracellular protease / general K05520 yhbO; deglycase [EC:3.5.1.124]
D PAGK_0487 hypothetical protein K07052 K07052; CAAX protease family protein
D PAGK_0815 hypothetical protein K07052 K07052; CAAX protease family protein
D PAGK_1893 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PAGK_1825 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PAGK_0128 M16 family peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D PAGK_0129 protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D PAGK_1435 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PAGK_1493 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PAGK_1755 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PAGK_1467 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PAGK_1479 Xaa-Pro aminopeptidase I K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PAGK_0290 putative cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PAGK_0579 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D PAGK_2216 trypsin-like serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D PAGK_1530 serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D PAGK_1016 hypothetical protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D PAGK_0287 putative carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PAGK_0608 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PAGK_0609 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PAGK_0872 protease K07177 K07177; Lon-like protease
D PAGK_1130 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PAGK_0749 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PAGK_1222 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PAGK_0612 tricorn protease K08676 tri; tricorn protease [EC:3.4.21.-]
D PAGK_1633 peptidase S51 family protein K05995 pepE; dipeptidase E [EC:3.4.13.21]
D PAGK_0945 20S proteasome alpha-subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PAGK_0946 20S proteasome beta-subunit precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 01003 Glycosyltransferases [BR:pach01003]
D PAGK_0931 glycosyl transferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D PAGK_0542 putative dolichyl-phosphate-mannose-protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D PAGK_1747 glycosyl transferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D PAGK_1719 glycosyl transferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D PAGK_1490 putative glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D PAGK_0905 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PAGK_1447 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D PAGK_1626 succinoglycan biosynthesis protein ExoA K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D PAGK_1193 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pach01005]
D PAGK_0905 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pach01011]
D PAGK_0928 UDP-N-acetylglucosamine K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PAGK_1809 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PAGK_1369 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PAGK_1372 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PAGK_1375 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PAGK_0821 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAGK_2246 D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAGK_2194 alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D PAGK_1604 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PAGK_1373 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PAGK_1370 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PAGK_2127 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PAGK_2046 membrane protein, MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D PAGK_1376 cell division protein FtsI/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PAGK_0213 putative penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D PAGK_0287 putative carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PAGK_1016 hypothetical protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D PAGK_1406 NPL/P60 family secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PAGK_1877 putative cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PAGK_2351 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PAGK_0973 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PAGK_2073 rare lipoprotein A (RlpA) family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:pach01004]
D PAGK_1169 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PAGK_1170 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PAGK_1172 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PAGK_1739 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAGK_1123 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PAGK_0647 enoyl-(acyl carrier protein) reductase K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D PAGK_0587 putative long-chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAGK_2139 putative long-chain-fatty-acid--CoA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAGK_1403 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAGK_2142 putative 1-acyl-sn-glycerol-3-phosphate K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAGK_0820 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:pach01006]
D PAGK_1395 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PAGK_1566 undecaprenyl pyrophosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D PAGK_1134 tRNA delta(2)-isopentenylpyrophosphate K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PAGK_1861 1,4-dihydroxy-2-naphthoate K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PAGK_0620 membrane protein, putative heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pach01007]
D PAGK_0798 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAGK_1788 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAGK_1789 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PAGK_0777 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAGK_0855 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PAGK_0397 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAGK_2026 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAGK_1657 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAGK_0246 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAGK_0614 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAGK_1257 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAGK_0209 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PAGK_0598 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PAGK_0978 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAGK_0984 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAGK_1206 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAGK_2119 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAGK_0679 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAGK_1077 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAGK_0975 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAGK_0772 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAGK_0773 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAGK_0031 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAGK_1000 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAGK_0418 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PAGK_1785 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PAGK_0834 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PAGK_1187 adenosylmethionine-8-amino-7-oxononanoate K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PAGK_0324 glutamate-1-semialdehyde 2,1-aminomutase, HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PAGK_0812 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAGK_0500 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pach00194]
D PAGK_0915 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PAGK_0914 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PAGK_0913 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PAGK_0912 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PAGK_0911 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PAGK_0910 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PAGK_0909 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PAGK_0908 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pach03000]
D PAGK_1904 oxidative stress transcriptional regulatory K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PAGK_1143 putative transcriptional regulatory protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D PAGK_0149 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D PAGK_0012 putative transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PAGK_2238 LacI family transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PAGK_0626 MalR repressor protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D PAGK_1452 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D PAGK_1909 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PAGK_1190 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PAGK_1304 TetR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D PAGK_0933 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PAGK_1272 transcriptional repressor, MarR family K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D PAGK_1551 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PAGK_1949 putative heat shock transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D PAGK_1207 metal uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PAGK_0254 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PAGK_1144 transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D PAGK_0584 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D PAGK_0502 repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D PAGK_1634 putative BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PAGK_1509 NAD-dependent aldehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PAGK_0319 hypothetical protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D PAGK_0696 putative regulator of sorbitol operon K03491 licR; probable licABCH operon transcriptional regulator
D PAGK_0251 putative regulatory protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D PAGK_1622 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D PAGK_0891 transcription factor WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D PAGK_2147 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D PAGK_2249 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAGK_0378 putative transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D PAGK_0776 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PAGK_1544 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PAGK_1237 heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D PAGK_0671 putative transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PAGK_1692 hypothetical protein K03973 pspC; phage shock protein C
D PAGK_0937 sugar-binding domain-containing protein K05346 deoR; deoxyribonucleoside regulator
D PAGK_2215 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D PAGK_1157 pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PAGK_0844 hypothetical protein K07735 algH; putative transcriptional regulator
D PAGK_1362 putative DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D PAGK_1128 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D PAGK_1379 hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pach03021]
D PAGK_0490 superfamily II DNA/RNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D PAGK_1749 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PAGK_1801 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PAGK_1800 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PAGK_0961 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PAGK_1121 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D PAGK_0888 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PAGK_0684 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PAGK_0964 putative NusB-family protein K03625 nusB; transcription antitermination protein NusB
D PAGK_1806 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PAGK_1362 putative DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D PAGK_1569 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PAGK_0900 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pach03019]
D PAGK_1308 putative ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D PAGK_0730 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PAGK_0710 metal dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PAGK_1139 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PAGK_1397 guanyl-specific ribonuclease Sa3 precursor K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D PAGK_0577 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PAGK_1231 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PAGK_0565 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAGK_0706 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PAGK_0900 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PAGK_2171 6-phosphofructokinase, type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PAGK_1952 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAGK_0470 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAGK_1701 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAGK_0364 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PAGK_0966 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PAGK_2210 putative RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PAGK_1321 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D PAGK_0804 superfamily II RNA helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D PAGK_1124 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D PAGK_0159 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pach03011]
D PAGK_1352 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PAGK_0657 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PAGK_1777 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PAGK_1750 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PAGK_1766 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PAGK_2134 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PAGK_1795 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PAGK_1769 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PAGK_1728 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PAGK_1784 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PAGK_1751 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PAGK_1796 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PAGK_1752 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PAGK_1770 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PAGK_2059 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PAGK_0705 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PAGK_0741 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PAGK_1774 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PAGK_2132 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PAGK_1779 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PAGK_1252 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PAGK_1804 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PAGK_1780 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PAGK_1783 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PAGK_1782 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PAGK_1771 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PAGK_1768 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PAGK_2131 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PAGK_1803 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PAGK_1805 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PAGK_1802 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PAGK_1729 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PAGK_1773 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PAGK_1764 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PAGK_1776 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PAGK_1748 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PAGK_1767 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PAGK_0748 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PAGK_0770 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PAGK_1307 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PAGK_1778 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PAGK_1781 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PAGK_1772 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PAGK_1306 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PAGK_2057 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PAGK_1775 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PAGK_1765 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PAGK_0901 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PAGK_2056 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PAGK_0729 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PAGK_2060 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PAGK_1812 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PAGK_2058 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PAGK_0769 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PAGK_1753 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PAGK_2020 hypothetical protein K02919 RP-L36; large subunit ribosomal protein L36
D PAGK_0554 ribosomal L25P family protein K02897 RP-L25; large subunit ribosomal protein L25
D PAGK_2276 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAGK_2284 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAGK_2299 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAGK_2301 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAGK_2274 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAGK_2282 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAGK_2275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAGK_2283 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAGK_2300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pach03009]
D PAGK_0730 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PAGK_0577 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PAGK_1216 GTP-binding protein Era K03595 era; GTPase
D PAGK_1302 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D PAGK_1362 putative DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D PAGK_0684 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PAGK_0964 putative NusB-family protein K03625 nusB; transcription antitermination protein NusB
D PAGK_1806 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PAGK_0545 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PAGK_0956 tRNA/rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PAGK_1962 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PAGK_1735 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PAGK_0713 putative methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PAGK_1235 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PAGK_2255 glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PAGK_1378 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PAGK_0543 putative tetrapyrrole (corrin/porphyrin) K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PAGK_0785 putative cytotoxin/hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PAGK_0643 putative resistance protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PAGK_0396 putative tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PAGK_0664 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PAGK_2219 putative RNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PAGK_0796 ribosomal large subunit pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PAGK_1360 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PAGK_1712 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PAGK_0513 putative ribosomal-protein-alanine K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D PAGK_0743 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D PAGK_1147 radical SAM superfamily protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PAGK_1308 putative ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D PAGK_0974 endonuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PAGK_0885 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PAGK_0942 GTP-binding protein EngA K03977 engA; GTPase
D PAGK_1132 GTP-binding protein K03665 hflX; GTPase
D PAGK_0904 SUA5 related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PAGK_0987 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PAGK_0689 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PAGK_0683 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D PAGK_1529 hypothetical protein K14761 rlbA; ribosome-associated protein
D PAGK_1298 hypothetical protein K09710 ybeB; ribosome-associated protein
D PAGK_1218 putative metalloprotease K07042 ybeY; probable rRNA maturation factor
D PAGK_1555 translation-associated GTPase K06942 ychF; ribosome-binding ATPase
D PAGK_0728 metal-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pach03016]
D PAGK_1397 guanyl-specific ribonuclease Sa3 precursor K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D PAGK_0798 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAGK_1788 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAGK_0679 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAGK_0246 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAGK_1257 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAGK_1657 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAGK_1789 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PAGK_2026 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAGK_0209 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PAGK_0598 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PAGK_0978 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAGK_0975 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAGK_1206 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAGK_1077 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAGK_2119 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAGK_0397 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAGK_0614 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAGK_0984 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAGK_0772 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAGK_0773 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAGK_0777 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAGK_0855 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PAGK_0367 D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PAGK_0806 putative cell-cycle regulation histidine triad K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PAGK_0951 putative methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D PAGK_1733 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PAGK_1734 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PAGK_0700 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PAGK_1037 aminotransferase class V, putative cysteine K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAGK_0904 SUA5 related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PAGK_1134 tRNA delta(2)-isopentenylpyrophosphate K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PAGK_2263 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PAGK_1603 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PAGK_1088 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PAGK_2166 putative transcriptional regulator K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PAGK_2080 putative cytidine and deoxycytidylate deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PAGK_1136 MiaB family protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PAGK_0744 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PAGK_0771 putative rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D PAGK_2219 putative RNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PAGK_1036 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PAGK_0369 putative glycine cleavage T-protein K06980 ygfZ; tRNA-modifying protein YgfZ
D PAGK_1228 queuine/archaeosine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PAGK_0288 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PAGK_1713 M22 family peptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PAGK_1711 putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PAGK_1714 nucleotide-binding protein (P-loop hydrolase) K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PAGK_0706 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pach03012]
D PAGK_0685 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PAGK_0768 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PAGK_0658 elongation factor Ts K02357 tsf; elongation factor Ts
D PAGK_1792 elongation factor Tu K02358 tuf; elongation factor Tu
D PAGK_1794 elongation factor G K02355 fusA; elongation factor G
D PAGK_0902 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PAGK_0660 ribosome recycling factor K02838 frr; ribosome recycling factor
D PAGK_0903 putative methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PAGK_0555 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PAGK_1754 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PAGK_0965 elongation factor P K02356 efp; elongation factor P
D PAGK_0827 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PAGK_0922 hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pach03110]
D PAGK_1933 ATP-dependent protease (Clp chaperone) K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PAGK_0305 Clp family ATP-binding protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PAGK_0610 ATP-dependent protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PAGK_1952 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAGK_0470 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAGK_1701 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAGK_1236 chaperone protein DnaJ2 K03686 dnaJ; molecular chaperone DnaJ
D PAGK_1950 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PAGK_1951 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D PAGK_1390 18 kDa antigen 2 K13993 HSP20; HSP20 family protein
D PAGK_0232 putative heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D PAGK_1702 10 kDa chaperonin K04078 groES; chaperonin GroES
D PAGK_0290 putative cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PAGK_0908 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PAGK_0515 putative component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D PAGK_1530 serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D PAGK_0062 glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PAGK_1409 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PAGK_1053 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PAGK_0504 thiol-disulfide isomerase K03671 TXN; thioredoxin
D PAGK_2223 thioredoxin K03671 TXN; thioredoxin
D PAGK_1047 putative thioredoxin K05838 ybbN; putative thioredoxin
D PAGK_0256 hypothetical protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:pach04131]
D PAGK_1311 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAGK_0058 glycosyl hydrolase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D PAGK_0723 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D PAGK_1936 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAGK_1318 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAGK_0384 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_1324 putative phosphoglycerate K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_1359 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAGK_1107 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:pach04121]
C 03051 Proteasome [BR:pach03051]
D PAGK_0945 20S proteasome alpha-subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PAGK_0946 20S proteasome beta-subunit precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PAGK_0799 DeoR family transcriptional regulator K13572 pafB; proteasome accessory factor B
D PAGK_0800 regulatory protein K13573 pafC; proteasome accessory factor C
C 03032 DNA replication proteins [BR:pach03032]
D PAGK_1658 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PAGK_1610 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PAGK_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PAGK_2148 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PAGK_1197 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PAGK_0582 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_2133 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_1003 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAGK_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAGK_1253 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAGK_0274 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAGK_1656 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAGK_0234 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PAGK_0750 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PAGK_1355 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAGK_0593 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PAGK_0009 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PAGK_1106 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PAGK_0008 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PAGK_1109 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PAGK_0271 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pach03036]
D PAGK_0730 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PAGK_1936 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAGK_0304 hypothetical protein K26249 lsr2; nucleoid-associated protein Lsr2
D PAGK_1610 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PAGK_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PAGK_2033 starvation-inducible DNA-binding protein or K04047 dps; starvation-inducible DNA-binding protein
D PAGK_0933 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PAGK_0828 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PAGK_1376 cell division protein FtsI/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PAGK_0825 FtsK/SpoIIIE protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PAGK_1368 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PAGK_1371 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PAGK_0829 cell division protein K09811 ftsX; cell division transport system permease protein
D PAGK_1367 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PAGK_1365 hypothetical protein K09772 sepF; cell division inhibitor SepF
D PAGK_0794 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D PAGK_2250 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PAGK_2326 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D PAGK_2380 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D PAGK_2332 plasmid partition protein ParA K03496 parA; chromosome partitioning protein
D PAGK_0163 partitioning protein K03496 parA; chromosome partitioning protein
D PAGK_2358 hypothetical protein K03496 parA; chromosome partitioning protein
D PAGK_2249 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAGK_2255 glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PAGK_0656 site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PAGK_0793 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PAGK_1484 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PAGK_1319 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:pach03400]
D PAGK_0755 methylated-DNA--protein-cysteine K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PAGK_1572 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PAGK_2151 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PAGK_0323 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PAGK_0255 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PAGK_0490 superfamily II DNA/RNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D PAGK_1710 putative 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PAGK_1943 MutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PAGK_1097 deoxyuridine 5'-triphosphate K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PAGK_0918 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PAGK_0731 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PAGK_0596 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PAGK_1813 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PAGK_2140 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PAGK_0593 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PAGK_1355 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAGK_1326 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PAGK_1330 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PAGK_1322 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PAGK_0863 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAGK_0868 putative DNA helicase II-like protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAGK_1685 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAGK_1801 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PAGK_1800 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PAGK_1749 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PAGK_0961 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PAGK_0561 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PAGK_1561 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PAGK_1562 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PAGK_1003 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAGK_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAGK_1253 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAGK_0274 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAGK_1656 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAGK_0234 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PAGK_0582 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_2133 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_0866 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PAGK_0867 exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PAGK_0865 exonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PAGK_1141 RecA protein K03553 recA; recombination protein RecA
D PAGK_0994 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PAGK_0993 Holliday junction DNA helicase B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PAGK_0995 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PAGK_0958 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PAGK_0334 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PAGK_0004 recombination protein F K03629 recF; DNA replication and repair protein RecF
D PAGK_0711 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PAGK_1211 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PAGK_0236 putative recombination protein RecR K06187 recR; recombination protein RecR
D PAGK_0787 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PAGK_0009 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PAGK_1106 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PAGK_0008 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PAGK_1109 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PAGK_0271 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PAGK_1610 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PAGK_1231 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PAGK_1599 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PAGK_1130 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PAGK_1581 nucleotidyltransferase/DNA polymerase involved K14161 imuB; protein ImuB
D PAGK_1580 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D PAGK_1140 recombination regulator RecX K03565 recX; regulatory protein
D PAGK_1131 putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PAGK_0363 hypothetical protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D PAGK_0792 putative ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D PAGK_1127 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAGK_2015 ribonucleotide-diphosphate reductase subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAGK_2016 ribonucleotide-diphosphate reductase subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pach03029]
D PAGK_0685 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PAGK_0768 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PAGK_0658 elongation factor Ts K02357 tsf; elongation factor Ts
D PAGK_1792 elongation factor Tu K02358 tuf; elongation factor Tu
D PAGK_1794 elongation factor G K02355 fusA; elongation factor G
D PAGK_1216 GTP-binding protein Era K03595 era; GTPase
D PAGK_0777 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAGK_1257 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAGK_0978 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAGK_1206 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PAGK_2026 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAGK_1030 aspartyl/glutamyl-tRNA amidotransferase subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PAGK_1029 aspartyl/glutamyl-tRNA amidotransferase subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PAGK_1031 glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PAGK_0582 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_2133 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAGK_1952 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAGK_1951 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D PAGK_0470 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAGK_1701 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAGK_1702 10 kDa chaperonin K04078 groES; chaperonin GroES
D PAGK_1236 chaperone protein DnaJ2 K03686 dnaJ; molecular chaperone DnaJ
D PAGK_1950 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PAGK_1037 aminotransferase class V, putative cysteine K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAGK_1484 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PAGK_0620 membrane protein, putative heme O synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PAGK_0622 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAGK_1480 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAGK_2261 putative inner membrane protein translocase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAGK_2247 membrane-associated protein K14998 SURF1; surfeit locus 1 family protein
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pach02000]
D PAGK_1978 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D PAGK_1977 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D PAGK_0207 ABC-type transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PAGK_0206 putative ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PAGK_1346 ABC-type transport system, fused ATPase and K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PAGK_0201 transport ATP-binding protein, CydCD K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PAGK_0202 transport ATP-binding protein, CydCD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PAGK_0098 ABC transporter K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D PAGK_0122 ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D PAGK_1446 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D PAGK_0099 ABC transporter K02021 ABC.MR; putative ABC transport system ATP-binding protein
D PAGK_0522 putative molybdate-binding protein precursor K02020 modA; molybdate transport system substrate-binding protein
D PAGK_0523 ABC transporter, putative molybdenum transport K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PAGK_0703 substrate binding component of glycine/betaine K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PAGK_1930 periplasmic binding protein of proline/glycine K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PAGK_0702 glycine betaine transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D PAGK_0701 putative glycine betaine/proline ABC K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PAGK_0419 putative substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D PAGK_0420 ABC transporter-associated permease K05846 opuBD; osmoprotectant transport system permease protein
D PAGK_0421 ABC transporter-associated permease K05846 opuBD; osmoprotectant transport system permease protein
D PAGK_0422 putative ABC transporter ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PAGK_0409 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAGK_0629 putative periplasmic maltose-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PAGK_0628 maltose transport system permease protein MalF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAGK_0627 maltose transport system permease protein MalG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PAGK_1880 extracellular solute-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PAGK_1879 binding-protein-dependent transport permease K17316 gtsB; glucose/mannose transport system permease protein
D PAGK_1878 binding-protein-dependent transport permease K17317 gtsC; glucose/mannose transport system permease protein
D PAGK_1585 putative sugar-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PAGK_0084 periplasmic protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D PAGK_0085 putative permease protein K10201 ngcF; N-acetylglucosamine transport system permease protein
D PAGK_0086 permease protein K10202 ngcG; N-acetylglucosamine transport system permease protein
D PAGK_0055 sugar-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D PAGK_0054 transport permease K10241 cebF; cellobiose transport system permease protein
D PAGK_0053 sugar transport permease BglB K10242 cebG; cellobiose transport system permease protein
D PAGK_1524 putative sugar binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D PAGK_0727 solute-binding protein of transport system K17244 chiE; putative chitobiose transport system substrate-binding protein
D PAGK_1523 putative sugar transport protein K17245 chiF; putative chitobiose transport system permease protein
D PAGK_0726 transport system permease K17245 chiF; putative chitobiose transport system permease protein
D PAGK_1522 putative transport system permease protein K17246 chiG; putative chitobiose transport system permease protein
D PAGK_0725 transport system permease K17246 chiG; putative chitobiose transport system permease protein
D PAGK_0015 periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PAGK_0014 ribose ABC transporter K10440 rbsC; ribose transport system permease protein
D PAGK_0013 ABC transporter protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PAGK_1663 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PAGK_1661 ABC transporter associated permease K23535 nupB; general nucleoside transport system permease protein
D PAGK_1660 ABC transporter associated permease K23536 nupC; general nucleoside transport system permease protein
D PAGK_1662 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PAGK_1198 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D PAGK_0414 putative sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PAGK_2204 solute-binding lipoprotein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PAGK_1876 sugar-binding periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PAGK_0415 sugar ABC transporter K02025 ABC.MS.P; multiple sugar transport system permease protein
D PAGK_1874 binding-protein-dependent transport permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D PAGK_2203 binding-protein-dependent transport system K02025 ABC.MS.P; multiple sugar transport system permease protein
D PAGK_2202 binding-protein-dependent transport system K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PAGK_0416 putative transport system permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PAGK_1875 binding-protein-dependent transport permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PAGK_0362 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PAGK_0361 putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D PAGK_0360 phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D PAGK_0359 phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PAGK_1687 outer membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PAGK_1689 ABC transporter associated permease K02072 metI; D-methionine transport system permease protein
D PAGK_1688 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PAGK_1527 ABC-type transporter, permease component K02029 ABC.PA.P; polar amino acid transport system permease protein
D PAGK_1528 ABC-transporter, ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PAGK_2051 putative peptide transport system secreted K15580 oppA; oligopeptide transport system substrate-binding protein
D PAGK_2052 putative peptide ABC transporter, permease K15581 oppB; oligopeptide transport system permease protein
D PAGK_2053 putative peptide ABC transporter, permease K15582 oppC; oligopeptide transport system permease protein
D PAGK_2054 putative peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PAGK_2055 putative peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAGK_1761 extracellular solute-binding transport protein K13889 gsiB; glutathione transport system substrate-binding protein
D PAGK_0877 ABC transporter, substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAGK_0716 bacterial extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAGK_0878 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAGK_0879 permease protein of oligopeptide ABC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAGK_0719 ABC-type dipeptide/oligopeptide/nickel K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAGK_0718 putative peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAGK_0880 putative ATP-binding ABC transporter protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAGK_0717 putative peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAGK_0881 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAGK_1350 hemin receptor precursor K25132 hmuT; heme transport system substrate-binding protein
D PAGK_1349 ABC-type transporter, permease component K25133 hmuU; heme transport system permease protein
D PAGK_1348 ABC-type transporter, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D PAGK_0073 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PAGK_0355 putative ABC-type transporter, periplasmic K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PAGK_0443 putative iron transport lipoprotein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PAGK_1709 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PAGK_1337 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PAGK_1473 iron transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PAGK_0074 ABC transporter K02015 ABC.FEV.P; iron complex transport system permease protein
D PAGK_0357 putative permease, FecCD transport family K02015 ABC.FEV.P; iron complex transport system permease protein
D PAGK_0441 FecCD-family membrane transport protein K02015 ABC.FEV.P; iron complex transport system permease protein
D PAGK_1708 Fe(III) dicitrate ABC transporter, permease K02015 ABC.FEV.P; iron complex transport system permease protein
D PAGK_1338 iron(III) dicitrate transport system permease K02015 ABC.FEV.P; iron complex transport system permease protein
D PAGK_1472 iron transport system, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D PAGK_0075 permease K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAGK_0356 ABC-type transporter, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAGK_0442 Fe uptake system permease K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAGK_0649 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAGK_1707 Fe(III) dicitrate ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAGK_1471 ABC transporter, nucleotide binding/ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAGK_1339 iron(III) dicitrate transport system permease K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAGK_0106 periplasmic-binding protein of ABC transporter K25034 btuF; cobalamin transport system substrate-binding protein
D PAGK_0107 periplasmic-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D PAGK_0105 transporter (putative iron (III) permease) K25027 btuC; cobalamin transport system permease protein
D PAGK_0104 ABC transporter K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D PAGK_0674 ABC transporter ATP-binding protein K09819 ABC.MN.P; manganese/iron transport system permease protein
D PAGK_0675 ABC transporter ATP-binding protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D PAGK_0447 cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D PAGK_0448 cobalt transport protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D PAGK_0446 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D PAGK_0449 membrane associated cobalt transport protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PAGK_0781 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D PAGK_0783 cobalt permease-related transporter K16783 bioN; biotin transport system permease protein
D PAGK_0782 ABC-type transporter, ATPase component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D PAGK_1738 putative ABC transporter-associated permease K16927 cbrT; energy-coupling factor transport system substrate-specific component
D PAGK_1736 ABC transporter-associated permease K16785 ecfT; energy-coupling factor transport system permease protein
D PAGK_1737 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PAGK_0185 ABC transporter K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D PAGK_0184 putative ABC-type transporter, permease K16925 ykoE; energy-coupling factor transport system permease protein
D PAGK_1512 solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PAGK_1514 ABC-type transporter, permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D PAGK_1513 ABC transporter, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D PAGK_0829 cell division protein K09811 ftsX; cell division transport system permease protein
D PAGK_0828 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PAGK_0177 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAGK_0428 putative permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAGK_0623 putative ABC transporter-associated permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAGK_2106 putative ABC transporter-associated permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAGK_1740 ABC transporter associated permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAGK_1224 putative ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAGK_0176 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAGK_0427 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAGK_0624 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAGK_2105 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAGK_1741 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAGK_1225 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAGK_1830 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAGK_1984 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAGK_0686 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAGK_0198 putative ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAGK_1855 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAGK_0049 ABC transporter associated permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PAGK_1859 putative ABC transporter-associated permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PAGK_1942 ABC transporter associated permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PAGK_0239 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PAGK_1283 ABC transporter associated permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PAGK_1425 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PAGK_0050 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAGK_0071 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAGK_0238 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAGK_1424 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAGK_1718 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAGK_1517 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAGK_1282 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAGK_1860 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAGK_1941 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAGK_0634 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PAGK_0652 sodium/bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PAGK_2163 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D PAGK_1166 galactose-proton symporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D PAGK_0484 putative sugar transporter YfiG K06609 iolT; MFS transporter, SP family, major inositol transporter
D PAGK_0505 sugar transporter family protein K06609 iolT; MFS transporter, SP family, major inositol transporter
D PAGK_0939 L-fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PAGK_2014 dicarboxylate transport protein / putative K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D PAGK_1495 proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PAGK_1064 putative oxalate/formate-specific permease K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D PAGK_1442 putative sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D PAGK_1913 putative sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D PAGK_0529 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PAGK_0921 putative multidrug-efflux transporter protein K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D PAGK_1759 membrane protein, putative permease K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D PAGK_1107 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family
D PAGK_1745 organic anion transporter family protein K08368 yaaU; MFS transporter, putative metabolite transport protein
D PAGK_1265 sugar transporter, permease protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D PAGK_0372 putative phosphoenolpyruvate-protein kinase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PAGK_0691 PTS HPr component K02784 ptsH; phosphocarrier protein HPr
D PAGK_0146 hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D PAGK_0373 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PAGK_0320 PTS system, glucose/sucrose specific IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PAGK_1449 putative PTS system component IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PAGK_0321 PTS system sugar-specific EII component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PAGK_1453 PTS system, glucose-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PAGK_1450 PTS system, glucose-specific IIAB K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D PAGK_1451 PTS system, glucose-specific IIB component K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D PAGK_1012 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PAGK_1044 phosphoenolpyruvate sugar phosphotransferase K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PAGK_2136 PTS system, fructose/mannitol specific IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D PAGK_0147 phosphotransferase system K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PAGK_1005 PTS cellobiose-specific component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PAGK_1007 PTS system, lichenan-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PAGK_1006 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PAGK_0376 putative PTS family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PAGK_0692 PTS system, glucitol/sorbitol-specific IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PAGK_0693 PTS system, glucitol/sorbitol-specific IIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D PAGK_0694 PTS system enzyme II sorbitol-specific factor K02783 srlA; glucitol/sorbitol PTS system EIIC component
D PAGK_0385 putative PTS system protein K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D PAGK_0021 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PAGK_0377 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PAGK_0386 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PAGK_0462 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D PAGK_1865 PTS protein, putative dihydroxyacetone kinase K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D PAGK_2214 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D PAGK_0988 ion channel membrane protein K10716 kch; voltage-gated potassium channel
D PAGK_1175 aerotolerance protein BatA K07114 yfbK; Ca-activated chloride channel homolog
D PAGK_1176 aerotolerance protein BatA K07114 yfbK; Ca-activated chloride channel homolog
D PAGK_0508 large conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PAGK_2207 putative mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D PAGK_1645 putative magnesium transport protein K03284 corA; magnesium transporter
D PAGK_1358 CrcB-like protein K06199 crcB; fluoride exporter
D PAGK_1665 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PAGK_1217 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PAGK_0293 putative outer membrane protein A K16191 K16191; peptidoglycan-binding protein ArfA
D PAGK_1539 lysine-specific permease K11733 lysP; lysine-specific permease
D PAGK_0576 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D PAGK_2173 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D PAGK_2192 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D PAGK_2193 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D PAGK_0388 amino acid permease K11738 ansP; L-asparagine permease
D PAGK_0856 L-asparagine permease K11738 ansP; L-asparagine permease
D PAGK_1548 arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D PAGK_0205 putative aminoacid permease K20265 gadC; glutamate:GABA antiporter
D PAGK_0926 cation-efflux transport protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PAGK_1229 hypothetical protein K11939 rhtA; inner membrane transporter RhtA
D PAGK_1389 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PAGK_0095 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D PAGK_1108 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D PAGK_0194 putative L-lactate permease K03303 lutP; lactate permease
D PAGK_0259 putative sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D PAGK_2077 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D PAGK_1093 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D PAGK_1094 Trk system potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D PAGK_0497 putative xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PAGK_0248 putative transport protein K26604 cyuP; cysteine uptake transport protein
D PAGK_0077 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PAGK_2157 putative chloride channel K03281 clcA; chloride channel protein, CIC family
D PAGK_1938 manganese transport protein K03322 mntH; manganese transport protein
D PAGK_2046 membrane protein, MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D PAGK_2086 potassium transporter K03549 kup; KUP system potassium uptake protein
D PAGK_1223 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D PAGK_1258 mebrane associated protein, DUF125 K22736 VIT; vacuolar iron transporter family protein
D PAGK_1371 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PAGK_0625 membrane-bound proton-translocating K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D PAGK_0347 cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D PAGK_0528 nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PAGK_0527 nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PAGK_0525 nitrate reductase gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PAGK_0535 anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D PAGK_0534 anaerobic dimethyl sulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D PAGK_0763 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D PAGK_1605 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D PAGK_1606 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PAGK_0151 hypothetical protein K18814 ictB; putative inorganic carbon (hco3(-)) transporter
C 02044 Secretion system [BR:pach02044]
D PAGK_2347 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PAGK_0262 putative secretory protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PAGK_0037 secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PAGK_2362 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PAGK_0263 hypothetical protein K12510 tadB; tight adherence protein B
D PAGK_0039 membrane associated protein K12511 tadC; tight adherence protein C
D PAGK_1364 hypothetical protein K02221 yggT; YggT family protein
D PAGK_0295 hypothetical protein K02221 yggT; YggT family protein
D PAGK_1256 ComE operon protein 1 K02237 comEA; competence protein ComEA
D PAGK_1866 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PAGK_1255 putative ComE operon protein 3 K02238 comEC; competence protein ComEC
D PAGK_0850 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAGK_0991 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PAGK_1807 putative SecE/Sec61-gamma subunit of protein K03073 secE; preprotein translocase subunit SecE
D PAGK_0990 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PAGK_1315 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAGK_1757 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAGK_0739 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PAGK_0737 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D PAGK_0992 translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PAGK_2261 putative inner membrane protein translocase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAGK_0802 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PAGK_1486 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PAGK_0803 Sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pach02042]
D PAGK_1665 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PAGK_1217 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PAGK_0843 cAMP factor K11045 cfa; cAMP factor
D PAGK_0923 cAMP factor K11045 cfa; cAMP factor
D PAGK_0954 cAMP factor K11045 cfa; cAMP factor
D PAGK_2002 cAMP factor K11045 cfa; cAMP factor
D PAGK_1441 cAMP factor K11045 cfa; cAMP factor
D PAGK_1565 putative hemolysin K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pach02022]
D PAGK_0381 putative sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PAGK_0380 response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PAGK_0118 two-component sensor, KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PAGK_0119 two-component response regulator, KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PAGK_2007 putative two-component system sensor kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D PAGK_2006 putative two-component response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D PAGK_0846 signal transduction histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D PAGK_0845 putative response regulator K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D PAGK_1955 putative two-component system response K02483 K02483; two-component system, OmpR family, response regulator
D PAGK_0430 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D PAGK_0890 sensory transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D PAGK_1357 putative two-component system response K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:pach02035]
D PAGK_2347 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PAGK_0262 putative secretory protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PAGK_0037 secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PAGK_2362 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pach04812]
D PAGK_1367 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PAGK_0794 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D PAGK_2250 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PAGK_2326 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D PAGK_2380 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D PAGK_2332 plasmid partition protein ParA K03496 parA; chromosome partitioning protein
D PAGK_0163 partitioning protein K03496 parA; chromosome partitioning protein
D PAGK_2358 hypothetical protein K03496 parA; chromosome partitioning protein
D PAGK_2249 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pach04147]
D PAGK_1936 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAGK_0565 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAGK_1318 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAGK_1317 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PAGK_1359 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAGK_1409 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PAGK_0470 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAGK_1701 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAGK_1952 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAGK_2030 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PAGK_1696 inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAGK_1697 IMP dehydrogenase / PAKP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAGK_1792 elongation factor Tu K02358 tuf; elongation factor Tu
D PAGK_0806 putative cell-cycle regulation histidine triad K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PAGK_0011 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1262 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_1868 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PAGK_0652 sodium/bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PAGK_0587 putative long-chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAGK_2139 putative long-chain-fatty-acid--CoA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAGK_1756 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAGK_0989 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PAGK_0835 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PAGK_2098 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PAGK_1521 glycosyl hydrolase, putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PAGK_2091 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAGK_2196 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PAGK_1042 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PAGK_2213 glycerol kinase 2 K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PAGK_1457 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_1464 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAGK_0325 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PAGK_0882 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAGK_1676 phosphoribosylaminoimidazolecarboxamide K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PAGK_0927 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAGK_2113 putative electron transfer flavoprotein K03522 fixB; electron transfer flavoprotein alpha subunit
D PAGK_0619 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PAGK_1316 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAGK_0384 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PAGK_1324 putative phosphoglycerate K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:pach02048]
D PAGK_2322 plasmid stabilization system protein K06218 relE; mRNA interferase RelE/StbE
D PAGK_1692 hypothetical protein K03973 pspC; phage shock protein C
D PAGK_1970 hypothetical protein K21495 fitA; antitoxin FitA
D PAGK_1367 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PAGK_0798 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAGK_1788 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAGK_1037 aminotransferase class V, putative cysteine K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pach01504]
D PAGK_0122 ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pach03100]
D PAGK_2297 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAGK_2271 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAGK_2266 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAGK_2270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAGK_2289 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAGK_2278 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAGK_2316 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAGK_2296 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PAGK_2310 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PAGK_2293 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PAGK_2272 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PAGK_2285 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PAGK_2286 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PAGK_2309 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PAGK_2292 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAGK_2280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAGK_2312 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAGK_2277 tRNA-His K14226 tRNA-His; tRNA His
D PAGK_2265 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PAGK_2273 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAGK_2313 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAGK_2281 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAGK_2298 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAGK_2303 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAGK_2302 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PAGK_2308 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PAGK_2295 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAGK_2288 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAGK_2305 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAGK_2311 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PAGK_2290 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAGK_2279 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAGK_2314 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAGK_2318 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAGK_2267 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAGK_2315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAGK_2317 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PAGK_2268 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAGK_2306 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAGK_2269 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PAGK_2304 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PAGK_2307 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PAGK_2287 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAGK_2294 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAGK_2291 tRNA-Val K14237 tRNA-Val; tRNA Val
D PAGK_2301 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAGK_2274 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAGK_2282 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PAGK_2275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAGK_2283 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAGK_2300 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PAGK_2276 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAGK_2284 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PAGK_2299 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PAGK_2027 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PAGK_1851 putative electron transfer oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D PAGK_2112 putative electron transfer flavoprotein-quinone K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D PAGK_1650 flavoprotein disulfide reductase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PAGK_2149 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PAGK_0354 mycothione/glutathione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D PAGK_1903 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D PAGK_1574 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PAGK_1086 peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PAGK_1589 putative peroxiredoxin (AhpC/TSA family protein) K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PAGK_1540 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PAGK_1902 alkyl hydroperoxide reductase C22 protein K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D PAGK_1550 stress-induced protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PAGK_2128 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D PAGK_2035 anaerobic ribonucleoside-triphosphate reductase K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PAGK_2186 hypothetical protein K21399 ortA; 2-amino-4-ketopentanoate thiolase alpha subunit [EC:2.3.1.263]
D PAGK_2187 putative threonine synthase / cystathionine K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263]
D PAGK_0932 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PAGK_1505 N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D PAGK_2123 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PAGK_0081 hypothetical protein K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D PAGK_0152 putative glycosyl transferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D PAGK_1455 putative glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D PAGK_1020 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PAGK_1961 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PAGK_1462 glutamate-ammonia-ligase adenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PAGK_0333 DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D PAGK_2115 putative L-carnitine dehydratase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D PAGK_1270 putative phosphotriesterase K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104]
D PAGK_0425 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D PAGK_0588 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PAGK_1297 phosphoglycerate K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D PAGK_0854 metal-dependent phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PAGK_0283 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PAGK_0544 DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PAGK_1051 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D PAGK_2000 endoglycoceramidase K05991 E3.2.1.123; endoglycosylceramidase [EC:3.2.1.123]
D PAGK_1485 endoglycoceramidase K05991 E3.2.1.123; endoglycosylceramidase [EC:3.2.1.123]
D PAGK_0127 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PAGK_0654 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PAGK_2042 hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PAGK_2045 hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PAGK_1380 magnesium chelatase, subunit ChlI K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PAGK_1178 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PAGK_0109 myosin-crossreactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D PAGK_1720 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PAGK_0394 hyalorunate lyase K01727 hysA; hyaluronate lyase [EC:4.2.2.1]
D PAGK_2061 FK506-binding protein/peptidyl-prolyl cis-trans K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D PAGK_1928 hypothetical protein K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
C 99981 Carbohydrate metabolism
D PAGK_0195 hypothetical protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PAGK_0196 putative iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PAGK_0197 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D PAGK_0636 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PAGK_2114 putative electron transfer flavoprotein (FixA protein) K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PAGK_1174 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PAGK_2144 hypothetical protein K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D PAGK_0275 hypothetical protein K15977 K15977; putative oxidoreductase
D PAGK_1232 hypothetical protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PAGK_0695 sorbitol operon activator K02466 gutM; glucitol operon activator protein
D PAGK_0494 cold shock protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D PAGK_0606 trigger factor K03545 tig; trigger factor
D PAGK_0830 SsrA-binding protein K03664 smpB; SsrA-binding protein
D PAGK_0753 competence related protein (magnesium chelatase, ATPase) K07391 comM; magnesium chelatase family protein
D PAGK_2222 OsmC-like protein K07397 yhfA; putative redox protein
D PAGK_0348 putative c-type cytochrome biogenesis protein K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D PAGK_1557 DNA recombination protein RmuC-like protein K09760 rmuC; DNA recombination protein RmuC
D PAGK_0752 hypothetical protein K07460 yraN; putative endonuclease
D PAGK_0754 DNA processing / uptake protein K04096 smf; DNA processing protein
D PAGK_0977 recombination factor protein RarA K07478 ycaJ; putative ATPase
D PAGK_1998 putative transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PAGK_1431 phage shock protein A K03969 pspA; phage shock protein A
D PAGK_0235 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PAGK_2239 glucuronide permease K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D PAGK_1082 aromatic amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family
D PAGK_1944 aromatic amino acid transport permease AroP K03293 TC.AAT; amino acid transporter, AAT family
D PAGK_2158 amino acid permease, putative GABA permease K03293 TC.AAT; amino acid transporter, AAT family
D PAGK_0143 dipeptide/tripeptide permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PAGK_1954 putative low-affinity phosphate transport K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PAGK_2092 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PAGK_1573 sodium-and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PAGK_1699 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PAGK_1934 branched-chain amino acid transport permease K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PAGK_2111 purine cytosine permease-like protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PAGK_1510 transport-protein, putative permease for K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PAGK_1945 membrane protein (putative permease) K07085 K07085; putative transport protein
C 99978 Cell growth
D PAGK_2260 jag-like protein K06346 jag; spoIIIJ-associated protein
D PAGK_0124 site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D PAGK_1468 carbon starvation protein A K06200 cstA; carbon starvation protein
D PAGK_1916 GTPase K06207 typA; GTP-binding protein
D PAGK_1219 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PAGK_1564 ATP-binding protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D PAGK_0607 hypothetical protein K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D PAGK_0382 putative phosphate transport system protein K02039 phoU; phosphate transport system protein
D PAGK_0488 putative copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PAGK_0640 acetyltransferase family protein K02348 elaA; ElaA protein
D PAGK_0268 putative helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D PAGK_0067 putative membrane transport protein K06994 K06994; putative drug exporter of the RND superfamily
D PAGK_1869 patatin-like phospholipase K07001 K07001; NTE family protein
D PAGK_0631 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D PAGK_0632 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D PAGK_1065 putative tRNA-processing ribonuclease K07058 K07058; membrane protein
D PAGK_1927 DedA family membrane protein K03975 dedA; membrane-associated protein
D PAGK_1454 DedA family protein K03975 dedA; membrane-associated protein
D PAGK_0949 membrane spanning protein YhgE K01421 yhgE; putative membrane protein
D PAGK_0068 membrane associated protein K01421 yhgE; putative membrane protein
D PAGK_1448 hypothetical protein K08996 yagU; putative membrane protein
D PAGK_1931 putative preprotein translocase subunit K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D PAGK_0103 radical SAM superfamily protein K06871 K06871; uncharacterized protein
D PAGK_1567 hypothetical protein K06888 K06888; uncharacterized protein
D PAGK_0742 hypothetical protein K06960 K06960; uncharacterized protein
D PAGK_0096 hypothetical protein K06975 K06975; uncharacterized protein
D PAGK_0673 acetyltransferase family protein K06976 K06976; uncharacterized protein
D PAGK_0712 hypothetical protein K07005 K07005; uncharacterized protein
D PAGK_0313 putative cell division inhibitor K07071 K07071; uncharacterized protein
D PAGK_2044 mebrane protein, permease K07089 K07089; uncharacterized protein
D PAGK_0681 hypothetical protein K07090 K07090; uncharacterized protein
D PAGK_2049 calcineurin-like phosphoesterase K07098 K07098; uncharacterized protein
D PAGK_1506 putative purine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D PAGK_0351 putative short chain dehydrogenase K07124 K07124; uncharacterized protein
D PAGK_2141 short chain dehydrogenase K07124 K07124; uncharacterized protein
D PAGK_0444 AAA family ATPase K07133 K07133; uncharacterized protein
D PAGK_1477 hypothetical protein K07164 K07164; uncharacterized protein
D PAGK_2262 hypothetical protein K08998 K08998; uncharacterized protein
D PAGK_1067 hypothetical protein K08999 K08999; uncharacterized protein
D PAGK_0567 hypothetical protein K09009 K09009; uncharacterized protein
D PAGK_0061 hypothetical protein K09704 K09704; uncharacterized protein
D PAGK_2011 hypothetical protein K09780 K09780; uncharacterized protein
D PAGK_1617 hypothetical protein K09791 K09791; uncharacterized protein
D PAGK_1958 hypothetical protein K09992 K09992; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2024