+D GENES KO #

  KEGG Orthology (KO) - Pediococcus acidilactici

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:paci00010] D A4V11_00910 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A4V11_03680 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A4V11_02285 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D A4V11_07435 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D A4V11_03690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4V11_09090 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A4V11_09080 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A4V11_09085 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A4V11_06000 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4V11_04945 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4V11_09095 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4V11_06005 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4V11_02280 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A4V11_03220 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D A4V11_06375 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A4V11_06370 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A4V11_06365 dienelactone hydrolase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A4V11_06360 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4V11_07695 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D A4V11_05190 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D A4V11_05065 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D A4V11_00135 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4V11_00530 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4V11_06280 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4V11_09015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4V11_00085 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_07310 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_02110 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_07985 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_09745 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_06390 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_09755 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A4V11_06750 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A4V11_08520 PTS maltose transporter subunit IIABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D A4V11_06760 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] C 00020 Citrate cycle (TCA cycle) [PATH:paci00020] D A4V11_06360 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4V11_05505 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A4V11_06375 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A4V11_06370 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A4V11_06365 dienelactone hydrolase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:paci00030] D A4V11_03680 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A4V11_03270 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A4V11_02925 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D A4V11_03735 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A4V11_00810 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A4V11_06425 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A4V11_01095 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A4V11_08445 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A4V11_08450 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A4V11_08455 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D A4V11_04935 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D A4V11_00360 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D A4V11_00365 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D A4V11_08540 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D A4V11_07630 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D A4V11_05925 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D A4V11_03130 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D A4V11_07635 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D A4V11_09015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4V11_02775 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A4V11_08210 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A4V11_00280 bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D A4V11_09255 sugar dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D A4V11_03730 gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12] D A4V11_06440 gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12] D A4V11_00295 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D A4V11_00355 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D A4V11_03690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4V11_07435 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D A4V11_02285 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:paci00040] D A4V11_00285 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D A4V11_00290 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D A4V11_06455 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D A4V11_00480 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D A4V11_06450 mannitol dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D A4V11_06460 hypothetical protein K21619 uxaE; tagaturonate epimerase [EC:5.1.2.7] D A4V11_09005 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4V11_00155 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D A4V11_01095 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A4V11_00160 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D A4V11_07535 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D A4V11_06260 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D A4V11_07530 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D A4V11_06265 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D A4V11_00215 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D A4V11_00230 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] C 00051 Fructose and mannose metabolism [PATH:paci00051] D A4V11_08560 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D A4V11_03615 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D A4V11_00225 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14] D A4V11_00215 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D A4V11_00230 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D A4V11_02285 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D A4V11_07435 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D A4V11_02760 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D A4V11_07530 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D A4V11_06265 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D A4V11_03690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4V11_09090 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A4V11_00115 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D A4V11_02755 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D A4V11_07430 PTS fructose transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D A4V11_09240 PTS mannose transporter subunit IID K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4V11_06330 PTS sugar transporter K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4V11_05005 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D A4V11_00255 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_00445 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_05000 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_06315 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_00260 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_00450 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_04995 PTS mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_06310 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_02920 glucitol/sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] C 00052 Galactose metabolism [PATH:paci00052] D A4V11_00135 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4V11_00530 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4V11_06280 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4V11_07340 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D A4V11_00550 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D A4V11_00560 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D A4V11_00555 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A4V11_04780 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A4V11_09005 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4V11_09015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4V11_00910 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A4V11_00540 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D A4V11_00545 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D A4V11_01505 beta-galactosidase subunit alpha K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23] D A4V11_00275 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D A4V11_09705 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D A4V11_02285 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D A4V11_07405 tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D A4V11_07395 galactose-6-phosphate isomerase K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26] D A4V11_07400 galactose-6-phosphate isomerase K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26] D A4V11_05660 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D A4V11_00330 hypothetical protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D A4V11_00315 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D A4V11_00320 PTS N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D A4V11_00325 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D A4V11_06300 agaS; tagatose-6-phosphate ketose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism [PATH:paci00053] D A4V11_08435 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D A4V11_08440 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D A4V11_00155 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] C 00500 Starch and sucrose metabolism [PATH:paci00500] D A4V11_07470 permease K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D A4V11_05660 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D A4V11_09005 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4V11_00070 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A4V11_07980 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D A4V11_09740 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D A4V11_06660 PTS sugar transporter K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D A4V11_09730 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D A4V11_07975 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D A4V11_06675 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D A4V11_07000 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D A4V11_00075 PTS glucose transporter subunit IIABC K02761 celB; cellobiose PTS system EIIC component D A4V11_09735 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02761 celB; cellobiose PTS system EIIC component D A4V11_07770 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component D A4V11_06385 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D A4V11_06670 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D A4V11_06835 PTS sugar transporter subunit IIA K02761 celB; cellobiose PTS system EIIC component D A4V11_00085 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_07310 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_02110 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_07985 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_09745 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_06390 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D A4V11_09755 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A4V11_06750 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A4V11_08520 PTS maltose transporter subunit IIABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D A4V11_06760 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D A4V11_09760 alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D A4V11_09015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4V11_00910 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A4V11_03680 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A4V11_08560 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:paci00520] D A4V11_09755 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A4V11_06750 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A4V11_06295 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D A4V11_05055 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D A4V11_08395 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D A4V11_08560 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D A4V11_09180 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4V11_09175 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D A4V11_08045 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D A4V11_07465 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D A4V11_05270 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A4V11_09160 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A4V11_10150 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D A4V11_10170 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3] D A4V11_06540 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D A4V11_01720 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D A4V11_06245 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D A4V11_08520 PTS maltose transporter subunit IIABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D A4V11_06760 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D A4V11_00910 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A4V11_09015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4V11_09005 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4V11_07340 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D A4V11_00550 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D A4V11_00560 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D A4V11_00555 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A4V11_04780 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A4V11_09705 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D A4V11_09240 PTS mannose transporter subunit IID K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4V11_06330 PTS sugar transporter K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4V11_05005 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D A4V11_00255 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_00445 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_05000 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_06315 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_00260 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_00450 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_04995 PTS mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_06310 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_03680 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A4V11_03615 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] C 00620 Pyruvate metabolism [PATH:paci00620] D A4V11_06375 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A4V11_06370 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A4V11_06365 dienelactone hydrolase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A4V11_06360 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4V11_05065 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D A4V11_08160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_08400 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_06705 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_08405 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D A4V11_02280 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A4V11_01260 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4V11_04950 carboxyltransferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4V11_01240 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4V11_04965 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4V11_01250 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4V11_04960 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4V11_01255 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4V11_04955 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4V11_00840 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D A4V11_07505 pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3] D A4V11_04595 pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3] D A4V11_07695 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D A4V11_05190 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D A4V11_01320 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D A4V11_05505 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A4V11_05510 NAD-dependent malic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101] D A4V11_03220 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:paci00630] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4V11_02560 catalase K03781 katE; catalase [EC:1.11.1.6] D A4V11_00940 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4V11_03580 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4V11_06360 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4V11_01795 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A4V11_07700 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A4V11_00280 bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] C 00640 Propanoate metabolism [PATH:paci00640] D A4V11_08160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_08400 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_06705 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_08405 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D A4V11_08125 propanediol utilization protein K13923 pduL; phosphate propanoyltransferase [EC:2.3.1.222] D A4V11_06360 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4V11_01260 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4V11_04950 carboxyltransferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4V11_01240 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4V11_04965 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4V11_01250 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4V11_04960 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4V11_01255 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4V11_04955 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4V11_07695 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D A4V11_05190 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D A4V11_08090 pduC; propanediol dehydratase K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28] D A4V11_08095 propanediol dehydratase K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28] D A4V11_08100 propanediol dehydratase K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28] D A4V11_00505 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202] D A4V11_08155 alcohol dehydrogenase K13921 pduQ; 1-propanol dehydrogenase D A4V11_08150 aldehyde dehydrogenase EutE K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87] C 00650 Butanoate metabolism [PATH:paci00650] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4V11_08180 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D A4V11_06190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A4V11_06700 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4V11_01280 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D A4V11_08800 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4V11_08805 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D A4V11_08000 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:paci00660] D A4V11_08800 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4V11_08805 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00562 Inositol phosphate metabolism [PATH:paci00562] D A4V11_02720 fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A4V11_09090 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:paci00190] D A4V11_03540 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D A4V11_03530 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D A4V11_03535 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D A4V11_03545 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D A4V11_03525 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D A4V11_03560 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A4V11_03550 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A4V11_03555 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D A4V11_01810 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:paci00710] D A4V11_09085 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A4V11_09080 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A4V11_03690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4V11_07435 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D A4V11_08445 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A4V11_08450 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A4V11_04935 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D A4V11_09090 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A4V11_01095 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00720 Carbon fixation pathways in prokaryotes [PATH:paci00720] D A4V11_03220 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D A4V11_05505 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4V11_01260 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4V11_04950 carboxyltransferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4V11_01240 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4V11_04965 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4V11_01250 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4V11_04960 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4V11_01255 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4V11_04955 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4V11_01620 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D A4V11_01010 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A4V11_08405 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D A4V11_08160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_08400 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_06705 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:paci00680] D A4V11_03580 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4V11_09095 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4V11_06005 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4V11_03690 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4V11_07435 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D A4V11_02285 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D A4V11_00365 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D A4V11_00360 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D A4V11_08160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_08400 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_06705 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_08405 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D A4V11_03220 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D A4V11_06000 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4V11_04945 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism [PATH:paci00910] D A4V11_00940 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4V11_07025 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D A4V11_02505 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism D A4V11_03260 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:paci00061] D A4V11_01260 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4V11_04950 carboxyltransferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4V11_01240 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4V11_04965 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4V11_01250 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4V11_04960 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4V11_01255 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4V11_04955 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4V11_01130 acyl carrier protein K02078 acpP; acyl carrier protein D A4V11_01220 acyl carrier protein K02078 acpP; acyl carrier protein D A4V11_01225 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A4V11_01215 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D A4V11_04970 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D A4V11_01235 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4V11_01230 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_03335 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_01485 NAD(P)-dependent dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_01210 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A4V11_01245 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A4V11_01265 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A4V11_08180 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:paci00071] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4V11_05065 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:paci00561] D A4V11_01795 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A4V11_07700 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A4V11_05800 dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D A4V11_05795 dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D A4V11_05790 PTS mannnose family transporter subunit IIA K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D A4V11_05545 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D A4V11_08205 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D A4V11_01125 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D A4V11_01830 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D A4V11_01305 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D A4V11_04030 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D A4V11_09890 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D A4V11_03800 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D A4V11_08630 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D A4V11_00505 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202] C 00564 Glycerophospholipid metabolism [PATH:paci00564] D A4V11_09000 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D A4V11_05550 alpha-glycerophosphate oxidase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21] D A4V11_01830 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D A4V11_01305 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D A4V11_03810 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D A4V11_04030 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D A4V11_07125 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D A4V11_00920 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D A4V11_01350 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D A4V11_03325 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D A4V11_03350 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D A4V11_06820 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism D A4V11_00540 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D A4V11_00545 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:paci00230] D A4V11_02820 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D A4V11_07635 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D A4V11_09015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4V11_02775 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A4V11_08210 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A4V11_01965 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D A4V11_01945 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D A4V11_01955 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D A4V11_01970 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D A4V11_01980 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D A4V11_01975 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A4V11_01960 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D A4V11_01990 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D A4V11_04060 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D A4V11_01995 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D A4V11_01985 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D A4V11_03155 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D A4V11_01950 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A4V11_02585 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D A4V11_07640 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D A4V11_05150 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D A4V11_06055 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D A4V11_02060 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A4V11_05710 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A4V11_01755 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D A4V11_03210 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D A4V11_04065 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D A4V11_08730 NUDIX hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D A4V11_08840 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A4V11_09860 guanosine monophosphate reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D A4V11_05735 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D A4V11_01050 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D A4V11_08735 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D A4V11_04850 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A4V11_04855 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D A4V11_09320 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D A4V11_02420 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D A4V11_07870 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D A4V11_05805 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D A4V11_02950 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D A4V11_03160 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D A4V11_08720 adenosine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D A4V11_08710 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D A4V11_04440 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D A4V11_02050 hypothetical protein K02083 allC; allantoate deiminase [EC:3.5.3.9] D A4V11_07025 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:paci00240] D A4V11_08360 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A4V11_01645 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A4V11_08355 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A4V11_01640 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A4V11_08345 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D A4V11_00405 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D A4V11_08350 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D A4V11_08365 dihydroorotate dehydrogenase B catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D A4V11_08340 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D A4V11_05855 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D A4V11_01335 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D A4V11_02060 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A4V11_05710 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A4V11_08730 NUDIX hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D A4V11_05275 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D A4V11_02225 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D A4V11_00875 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D A4V11_03575 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D A4V11_01635 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D A4V11_07660 deoA; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D A4V11_07835 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D A4V11_09320 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D A4V11_04850 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A4V11_04855 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D A4V11_02685 competence protein ComE K01493 comEB; dCMP deaminase [EC:3.5.4.12] D A4V11_04810 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D A4V11_04925 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D A4V11_03600 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D A4V11_02175 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:paci00250] D A4V11_10135 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D A4V11_08240 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D A4V11_08250 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D A4V11_10120 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A4V11_00165 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D A4V11_04125 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D A4V11_03160 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D A4V11_03155 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D A4V11_08345 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D A4V11_06190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A4V11_06700 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4V11_00940 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4V11_08360 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A4V11_01645 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A4V11_08355 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A4V11_01640 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A4V11_01975 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A4V11_09180 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4V11_01965 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:paci00260] D A4V11_03580 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4V11_01795 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A4V11_07700 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D A4V11_06000 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4V11_04945 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4V11_06360 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4V11_00170 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] C 00270 Cysteine and methionine metabolism [PATH:paci00270] D A4V11_05975 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D A4V11_08525 cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D A4V11_06755 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D A4V11_10030 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D A4V11_02810 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D A4V11_00120 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D A4V11_03415 histidine kinase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D A4V11_05675 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D A4V11_07695 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D A4V11_05190 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00280 Valine, leucine and isoleucine degradation [PATH:paci00280] D A4V11_06360 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4V11_08575 oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4V11_01280 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:paci00290] D A4V11_00170 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A4V11_08800 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00300 Lysine biosynthesis [PATH:paci00300] D A4V11_09370 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A4V11_02545 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A4V11_02460 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D A4V11_10125 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A4V11_05230 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:paci00310] D A4V11_06360 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4V11_06700 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:paci00220] D A4V11_07020 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D A4V11_07030 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D A4V11_01975 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A4V11_00940 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4V11_08360 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A4V11_01645 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A4V11_08355 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A4V11_01640 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A4V11_07025 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00330 Arginine and proline metabolism [PATH:paci00330] D A4V11_07835 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D A4V11_07575 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D A4V11_07580 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D A4V11_10085 cell wall anchor protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4V11_05060 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D A4V11_08695 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism D A4V11_07315 histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] C 00350 Tyrosine metabolism [PATH:paci00350] D A4V11_05065 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D A4V11_06700 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4V11_00520 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] C 00360 Phenylalanine metabolism [PATH:paci00360] D A4V11_00520 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D A4V11_10085 cell wall anchor protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:paci00380] D A4V11_06360 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4V11_10085 cell wall anchor protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4V11_02560 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D A4V11_06190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] C 00430 Taurine and hypotaurine metabolism [PATH:paci00430] D A4V11_06190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A4V11_00165 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D A4V11_04125 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D A4V11_08405 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D A4V11_08160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_08400 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4V11_06705 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:paci00450] D A4V11_05975 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D A4V11_08525 cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D A4V11_06755 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D A4V11_09340 cysteine sulfinate desulfinase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D A4V11_09010 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D A4V11_00410 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D A4V11_07900 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:paci00460] D A4V11_00070 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A4V11_08240 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D A4V11_08250 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D A4V11_03580 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:paci00470] D A4V11_05215 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A4V11_03455 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4V11_05385 D-alanine--poly(phosphoribitol) ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D A4V11_05375 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D A4V11_01975 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A4V11_03215 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D A4V11_02870 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A4V11_10135 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 00480 Glutathione metabolism [PATH:paci00480] D A4V11_08855 peptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A4V11_09500 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D A4V11_07850 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D A4V11_03735 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A4V11_00810 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A4V11_06425 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A4V11_03270 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:paci00511] D A4V11_00540 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D A4V11_00545 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D A4V11_01505 beta-galactosidase subunit alpha K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23] D A4V11_06655 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:paci00542] D A4V11_08905 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:paci00541] D A4V11_09005 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4V11_00555 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A4V11_04780 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A4V11_09705 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D A4V11_09675 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A4V11_02465 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4V11_09685 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4V11_09680 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A4V11_09695 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D A4V11_03615 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D A4V11_08045 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D A4V11_06540 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:paci00550] D A4V11_05270 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A4V11_09160 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A4V11_00685 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D A4V11_02870 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A4V11_10125 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A4V11_03455 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4V11_05230 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D A4V11_02340 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66] D A4V11_01345 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D A4V11_10045 phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D A4V11_02875 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A4V11_02865 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D A4V11_01580 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4V11_00615 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D A4V11_02880 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B D A4V11_00890 penicillin-binding protein K21465 pbpA; penicillin-binding protein A D A4V11_06035 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A4V11_03605 UDP-N-acetylmuramyl peptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D A4V11_03610 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:paci00552] D A4V11_10045 phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D A4V11_08905 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D A4V11_06520 UDP-N-acetyl-D-mannosamine transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D A4V11_05045 acetylglucosaminyldiphospho-UDP acetyl-beta-D-mannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D A4V11_02385 CDP-glycerol--glycerophosphate glycerophosphotransferase K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44] D A4V11_05420 CDP-glycerol--glycerophosphate glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D A4V11_02380 CDP-glycerol glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D A4V11_05455 CDP-glycerol--glycerophosphate glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D A4V11_07725 glycosyl transferase family 1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D A4V11_07730 glycosyl transferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D A4V11_03755 glycosyl transferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D A4V11_05385 D-alanine--poly(phosphoribitol) ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D A4V11_05375 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D A4V11_05380 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D A4V11_05370 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein D A4V11_04660 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D A4V11_01695 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D A4V11_09840 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D A4V11_03800 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D A4V11_08630 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D A4V11_09890 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D A4V11_09895 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] D A4V11_09575 lipopolysaccharide cholinephosphotransferase K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:paci00543] D A4V11_08905 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D A4V11_07305 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:paci00730] D A4V11_09600 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D A4V11_07755 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D A4V11_02040 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D A4V11_03405 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4V11_02805 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4V11_03400 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D A4V11_02045 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D A4V11_09595 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D A4V11_02030 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D A4V11_09605 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D A4V11_01090 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D A4V11_01100 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D A4V11_04440 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D A4V11_09610 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:paci00740] D A4V11_01735 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D A4V11_01745 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D A4V11_01535 HAD family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104] D A4V11_01730 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D A4V11_01740 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D A4V11_01405 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D A4V11_02485 NADPH-dependent oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38] D A4V11_09595 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D A4V11_02820 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism D A4V11_00595 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] C 00760 Nicotinate and nicotinamide metabolism [PATH:paci00760] D A4V11_05040 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D A4V11_07640 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D A4V11_00780 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D A4V11_05035 NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D A4V11_02945 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D A4V11_06700 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:paci00770] D A4V11_08800 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4V11_01470 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D A4V11_08810 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D A4V11_01060 DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D A4V11_02695 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D A4V11_00705 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D A4V11_05220 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:paci00780] D A4V11_01235 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4V11_01230 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_03335 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_01485 NAD(P)-dependent dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_01210 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A4V11_01245 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A4V11_01265 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A4V11_08700 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:paci00785] D A4V11_06380 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D A4V11_06360 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4V11_06375 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A4V11_06370 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A4V11_06365 dienelactone hydrolase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00790 Folate biosynthesis [PATH:paci00790] D A4V11_01775 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D A4V11_01770 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D A4V11_01750 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D A4V11_02170 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D A4V11_03385 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D A4V11_01760 tetrahydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D A4V11_01735 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] C 00670 One carbon pool by folate [PATH:paci00670] D A4V11_02170 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D A4V11_01620 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D A4V11_01010 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A4V11_03580 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4V11_01955 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D A4V11_01950 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A4V11_01070 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D A4V11_02175 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D A4V11_00895 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:paci00130] D A4V11_07790 NADPH:quinone reductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D A4V11_01725 flavodoxin K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D A4V11_05965 NAD(P)-dependent oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D A4V11_00585 NAD(P)-dependent oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:paci00900] D A4V11_07925 ipk; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4V11_01280 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D A4V11_07875 3-hydroxy-3-methylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D A4V11_01560 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D A4V11_01550 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D A4V11_01555 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D A4V11_01545 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D A4V11_01025 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D A4V11_01345 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D A4V11_08445 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A4V11_08450 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:paci00523] D A4V11_09675 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A4V11_02465 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4V11_09685 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4V11_09680 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A4V11_09695 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:paci01054] D A4V11_10135 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D A4V11_02465 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4V11_09685 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:paci00946] D A4V11_00070 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A4V11_00830 alpha-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D A4V11_07225 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:paci00521] D A4V11_00910 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A4V11_09015 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4V11_02720 fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A4V11_09675 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A4V11_02465 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4V11_09685 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4V11_09680 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A4V11_09695 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D A4V11_00910 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:paci00525] D A4V11_09675 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A4V11_02465 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4V11_09685 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D A4V11_01225 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A4V11_01230 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_03335 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_01485 NAD(P)-dependent dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_01265 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D A4V11_01130 acyl carrier protein K02078 acpP; acyl carrier protein D A4V11_01220 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:paci00999] D A4V11_10030 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D A4V11_00070 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:paci00362] D A4V11_01530 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D A4V11_05895 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:paci00627] D A4V11_10085 cell wall anchor protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4V11_00840 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:paci00625] D A4V11_05065 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D A4V11_05530 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D A4V11_05530 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation D A4V11_00520 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] C 00622 Xylene degradation [PATH:paci00622] D A4V11_00520 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D A4V11_01530 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:paci00643] D A4V11_10085 cell wall anchor protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D A4V11_01530 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:paci00626] D A4V11_05065 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:paci03020] D A4V11_04580 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A4V11_04575 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A4V11_04415 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A4V11_01055 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A4V11_05280 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta C 03022 Basal transcription factors D A4V11_06100 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:paci03010] D A4V11_02220 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D A4V11_01325 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D A4V11_04510 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D A4V11_03420 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D A4V11_04460 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D A4V11_06920 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D A4V11_04555 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D A4V11_04475 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D A4V11_04135 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D A4V11_04545 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D A4V11_04420 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D A4V11_04560 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D A4V11_04425 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D A4V11_07705 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D A4V11_02665 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D A4V11_01160 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D A4V11_04495 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D A4V11_06930 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D A4V11_04520 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D A4V11_02670 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D A4V11_02360 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D A4V11_04870 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D A4V11_04525 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D A4V11_04540 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D A4V11_04535 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D A4V11_04480 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D A4V11_04470 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D A4V11_04860 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D A4V11_06940 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D A4V11_04865 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D A4V11_04875 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D A4V11_04140 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D A4V11_04490 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D A4V11_04450 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D A4V11_04505 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D A4V11_04410 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D A4V11_04465 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D A4V11_01185 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D A4V11_00760 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D A4V11_00980 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D A4V11_04515 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D A4V11_04530 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D A4V11_04485 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D A4V11_00990 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D A4V11_01105 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A4V11_04500 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D A4V11_04455 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D A4V11_05260 rpmE2; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D A4V11_06885 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D A4V11_00755 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D A4V11_04430 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D A4V11_03055 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_07320 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_05120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_09905 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_07810 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_03050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_09920 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_05105 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_07325 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_07815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_03045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_07330 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_07820 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_09925 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_05100 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:paci00970] D A4V11_09915 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A4V11_07275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A4V11_05110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A4V11_04605 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_09855 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_09955 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_00965 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_04610 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_09065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_03040 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A4V11_05095 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A4V11_03020 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A4V11_10020 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A4V11_09985 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A4V11_02995 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D A4V11_05070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A4V11_03655 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A4V11_06205 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A4V11_03030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4V11_03650 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4V11_06210 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4V11_10010 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4V11_04615 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A4V11_00590 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A4V11_09945 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A4V11_09995 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A4V11_03005 tRNA-His K14226 tRNA-His; tRNA His D A4V11_09910 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A4V11_05115 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A4V11_10000 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A4V11_03000 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4V11_09950 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4V11_04625 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4V11_05010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4V11_10115 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4V11_06575 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A4V11_09935 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A4V11_10015 tRNA-Met K14230 tRNA-Met; tRNA Met D A4V11_09965 tRNA-Met K14230 tRNA-Met; tRNA Met D A4V11_09970 tRNA-Met K14230 tRNA-Met; tRNA Met D A4V11_09980 tRNA-Met K14230 tRNA-Met; tRNA Met D A4V11_03015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D A4V11_09990 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D A4V11_04600 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A4V11_09960 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A4V11_10005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A4V11_09975 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A4V11_02515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A4V11_03035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A4V11_09940 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A4V11_04620 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A4V11_05090 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A4V11_07825 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A4V11_04285 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D A4V11_03010 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D A4V11_05075 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D A4V11_04630 tRNA-Val K14237 tRNA-Val; tRNA Val D A4V11_09930 tRNA-Val K14237 tRNA-Val; tRNA Val D A4V11_03025 tRNA-Val K14237 tRNA-Val; tRNA Val D A4V11_04910 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D A4V11_04040 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A4V11_04035 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D A4V11_04045 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D A4V11_03250 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A4V11_02395 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A4V11_09265 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D A4V11_02325 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A4V11_02320 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A4V11_00725 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A4V11_04635 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A4V11_00410 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D A4V11_04905 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A4V11_07900 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A4V11_01070 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D A4V11_03390 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A4V11_10050 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A4V11_02830 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A4V11_05130 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A4V11_00600 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A4V11_01360 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A4V11_02400 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A4V11_00860 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A4V11_00865 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A4V11_07800 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A4V11_07865 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:paci03060] D A4V11_03775 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4V11_04445 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4V11_04885 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A4V11_09105 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A4V11_00335 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D A4V11_03275 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A4V11_00835 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4V11_06875 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4V11_08930 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4V11_03780 accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4V11_01155 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A4V11_04830 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D A4V11_01145 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A4V11_06830 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D A4V11_01625 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:paci04122] D A4V11_03405 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4V11_02805 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4V11_02795 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D A4V11_03400 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D A4V11_02035 hypothetical protein K03154 thiS; sulfur carrier protein D A4V11_02040 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:paci03018] D A4V11_09095 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4V11_06005 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4V11_09110 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D A4V11_05225 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A4V11_02235 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A4V11_09615 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A4V11_05265 transcription termination factor Rho K03628 rho; transcription termination factor Rho D A4V11_04695 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D A4V11_03310 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D A4V11_02660 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-] D A4V11_02745 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D A4V11_02285 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D A4V11_01420 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A4V11_08895 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:paci03030] D A4V11_09150 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A4V11_02290 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A4V11_01365 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D A4V11_04825 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A4V11_04800 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A4V11_02675 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A4V11_06895 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4V11_06945 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D A4V11_02315 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D A4V11_06925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_04350 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_08260 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D A4V11_01865 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D A4V11_00695 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4V11_05470 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:paci03410] D A4V11_09135 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D A4V11_00700 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A4V11_03445 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D A4V11_06805 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D A4V11_05475 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A4V11_02375 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D A4V11_00695 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4V11_02590 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A4V11_05470 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:paci03420] D A4V11_05180 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A4V11_01805 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D A4V11_09030 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D A4V11_09025 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D A4V11_02615 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D A4V11_04055 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4V11_08795 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4V11_07860 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4V11_00695 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4V11_05470 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A4V11_06100 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:paci03430] D A4V11_03305 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D A4V11_03230 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D A4V11_05485 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 D A4V11_03300 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D A4V11_04055 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4V11_08795 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4V11_07860 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4V11_01015 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D A4V11_01020 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D A4V11_02590 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A4V11_06925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_04350 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_02290 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A4V11_01365 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D A4V11_06895 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4V11_04825 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A4V11_02675 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A4V11_04800 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A4V11_09150 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A4V11_05470 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:paci03440] D A4V11_02590 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A4V11_06925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_04350 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_06905 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D A4V11_02330 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D A4V11_04815 recombination protein RecR K06187 recR; recombination protein RecR D A4V11_03315 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D A4V11_00695 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4V11_03295 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D A4V11_03290 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D A4V11_01120 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D A4V11_02780 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D A4V11_02290 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A4V11_01365 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D A4V11_06895 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4V11_04825 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A4V11_02675 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A4V11_04800 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A4V11_09150 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A4V11_01065 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:paci02010] D A4V11_09505 glycoside:cation symporter K11070 potC; spermidine/putrescine transport system permease protein D A4V11_05755 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D A4V11_07840 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein D A4V11_05750 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D A4V11_05760 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D A4V11_05765 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D A4V11_07845 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D A4V11_05920 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D A4V11_08950 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A4V11_08955 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D A4V11_08960 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D A4V11_08965 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A4V11_08970 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A4V11_08760 glutamine ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D A4V11_08765 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D A4V11_08770 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D A4V11_08755 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D A4V11_02625 ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D A4V11_02620 glnQ; glutamine ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D A4V11_03490 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D A4V11_03495 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D A4V11_03500 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D A4V11_05390 BioY protein K03523 bioY; biotin transport system substrate-specific component D A4V11_09280 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D A4V11_04150 cobalt ABC transporter ATP-binding protein K16785 ecfT; energy-coupling factor transport system permease protein D A4V11_08190 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D A4V11_04160 cbiO; energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D A4V11_04155 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D A4V11_09310 multidrug ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein D A4V11_09315 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D A4V11_05450 Teichoic acid translocation permease TagG K09692 tagG; teichoic acid transport system permease protein D A4V11_05445 teichoic acid ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D A4V11_01900 lantibiotic ABC transporter permease K20491 nisE; lantibiotic transport system permease protein D A4V11_02010 hypothetical protein K20491 nisE; lantibiotic transport system permease protein D A4V11_01895 lantibiotic ABC transporter permease K20492 nisG; lantibiotic transport system permease protein D A4V11_02005 hypothetical protein K20492 nisG; lantibiotic transport system permease protein D A4V11_01905 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D A4V11_02015 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D A4V11_05780 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D A4V11_03630 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D A4V11_03625 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D A4V11_06970 ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:paci02060] D A4V11_09880 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D A4V11_09875 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D A4V11_09755 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A4V11_06750 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A4V11_08520 PTS maltose transporter subunit IIABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D A4V11_06760 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D A4V11_07470 permease K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D A4V11_09765 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D A4V11_02115 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D A4V11_07980 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D A4V11_09740 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D A4V11_06660 PTS sugar transporter K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D A4V11_09730 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D A4V11_07975 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D A4V11_06675 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D A4V11_07000 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D A4V11_00075 PTS glucose transporter subunit IIABC K02761 celB; cellobiose PTS system EIIC component D A4V11_09735 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02761 celB; cellobiose PTS system EIIC component D A4V11_07770 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component D A4V11_06385 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D A4V11_06670 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D A4V11_06835 PTS sugar transporter subunit IIA K02761 celB; cellobiose PTS system EIIC component D A4V11_09240 PTS mannose transporter subunit IID K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4V11_06330 PTS sugar transporter K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4V11_05005 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D A4V11_00255 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_00445 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_05000 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_06315 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_00260 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_00450 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_04995 PTS mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_06310 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_07600 PTS mannose transporter subunit IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-] D A4V11_09215 PTS sugar transporter K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-] D A4V11_07605 PTS sugar transporter K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-] D A4V11_09220 PTS sugar transporter K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component D A4V11_07610 PTS lactose transporter subunit IIBC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component D A4V11_09225 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component D A4V11_07615 PTS mannose transporter subunit IIAB K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component D A4V11_00330 hypothetical protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D A4V11_00315 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D A4V11_00320 PTS N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D A4V11_00325 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D A4V11_02920 glucitol/sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D A4V11_07385 PTS sugar transporter subunit IIA K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204] D A4V11_07380 PTS fructose transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204] D A4V11_07375 PTS glucitol transporter subunit IIA K20114 gatC; galactose PTS system EIIC component D A4V11_08435 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D A4V11_08440 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D A4V11_00115 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D A4V11_02755 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D A4V11_07430 PTS fructose transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D A4V11_02760 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D A4V11_00110 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:paci03070] D A4V11_04885 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A4V11_09105 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A4V11_03775 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4V11_04445 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4V11_00335 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D A4V11_03275 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A4V11_00835 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4V11_06875 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4V11_08930 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4V11_03780 accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4V11_01145 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A4V11_01155 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:paci02020] D A4V11_08945 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D A4V11_08940 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D A4V11_08950 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A4V11_06545 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4V11_06565 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D A4V11_06570 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D A4V11_06890 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D A4V11_05385 D-alanine--poly(phosphoribitol) ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D A4V11_05380 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D A4V11_05375 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D A4V11_05370 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein D A4V11_00820 two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D A4V11_00815 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D A4V11_01905 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D A4V11_02015 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D A4V11_01900 lantibiotic ABC transporter permease K20491 nisE; lantibiotic transport system permease protein D A4V11_02010 hypothetical protein K20491 nisE; lantibiotic transport system permease protein D A4V11_01895 lantibiotic ABC transporter permease K20492 nisG; lantibiotic transport system permease protein D A4V11_02005 hypothetical protein K20492 nisG; lantibiotic transport system permease protein D A4V11_00730 histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] D A4V11_00735 DNA-binding response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT D A4V11_00740 murein hydrolase regulator LrgA K05338 lrgA; holin-like protein D A4V11_00745 antiholin LrgB K05339 lrgB; holin-like protein LrgB D A4V11_06125 two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D A4V11_06120 DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR D A4V11_00940 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4V11_09070 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D A4V11_07015 two-component system response regulator K07719 glnL; two-component system, response regulator GlnL D A4V11_06540 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:paci02024] D A4V11_05675 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D A4V11_06190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A4V11_07570 amino acid:proton antiporter K20265 gadC; glutamate:GABA antiporter D A4V11_06195 glutamate:gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter D A4V11_07075 hypothetical protein K20276 bapA; large repetitive protein D A4V11_01745 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D A4V11_07405 tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D A4V11_00835 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4V11_06875 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4V11_04885 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A4V11_09105 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A4V11_03775 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4V11_04445 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4V11_00335 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D A4V11_03275 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A4V11_08930 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4V11_03780 accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4V11_01145 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A4V11_01155 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A4V11_01905 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D A4V11_02015 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D A4V11_01900 lantibiotic ABC transporter permease K20491 nisE; lantibiotic transport system permease protein D A4V11_02010 hypothetical protein K20491 nisE; lantibiotic transport system permease protein D A4V11_01895 lantibiotic ABC transporter permease K20492 nisG; lantibiotic transport system permease protein D A4V11_02005 hypothetical protein K20492 nisG; lantibiotic transport system permease protein C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly [PATH:paci02040] D A4V11_02310 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D A4V11_09070 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D A4V11_09095 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4V11_06005 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:paci01501] D A4V11_07225 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D A4V11_05780 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D A4V11_01580 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4V11_00615 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] C 01502 Vancomycin resistance [PATH:paci01502] D A4V11_03455 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4V11_05215 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A4V11_05230 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D A4V11_02875 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A4V11_02865 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:paci01503] D A4V11_02405 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A4V11_06545 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4V11_05385 D-alanine--poly(phosphoribitol) ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D A4V11_05380 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D A4V11_05375 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D A4V11_05370 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:paci01000] C 01001 Protein kinases [BR:paci01001] D A4V11_01085 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D A4V11_09635 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D A4V11_08945 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D A4V11_06565 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D A4V11_00820 two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D A4V11_06125 two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D A4V11_00730 histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:paci01009] D A4V11_02285 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D A4V11_01080 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:paci01002] D A4V11_01625 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D A4V11_04940 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D A4V11_08840 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A4V11_02750 cell wall hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D A4V11_06105 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D A4V11_01965 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D A4V11_09180 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4V11_10120 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A4V11_05250 class A sortase K07284 srtA; sortase A [EC:3.4.22.70] D A4V11_00190 peptidase C69 K08659 pepDA; dipeptidase [EC:3.4.-.-] D A4V11_09270 peptidase U34 K08659 pepDA; dipeptidase [EC:3.4.-.-] D A4V11_06220 peptidase C69 K08659 pepDA; dipeptidase [EC:3.4.-.-] D A4V11_04720 peptidase U34 K08659 pepDA; dipeptidase [EC:3.4.-.-] D A4V11_01525 peptidase U34 K08659 pepDA; dipeptidase [EC:3.4.-.-] D A4V11_05345 peptidase K07052 K07052; CAAX protease family protein D A4V11_08885 CAAX protease K07052 K07052; CAAX protease family protein D A4V11_08855 peptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A4V11_05650 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D A4V11_08245 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D A4V11_07795 dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-] D A4V11_09370 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A4V11_02545 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A4V11_05770 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D A4V11_02050 hypothetical protein K02083 allC; allantoate deiminase [EC:3.5.3.9] D A4V11_08670 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D A4V11_05145 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A4V11_05240 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D A4V11_01355 metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D A4V11_06545 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4V11_06035 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A4V11_09060 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D A4V11_03970 peptidase K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D A4V11_08705 X-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11] D A4V11_01290 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D A4V11_06830 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D A4V11_08695 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D A4V11_02140 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D A4V11_00900 rhomboid family intramembrane serine protease K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D A4V11_01845 HslU--HslV peptidase proteolytic subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] C 01003 Glycosyltransferases [BR:paci01003] D A4V11_09890 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D A4V11_09895 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] D A4V11_01580 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4V11_00615 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D A4V11_06520 UDP-N-acetyl-D-mannosamine transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D A4V11_05045 acetylglucosaminyldiphospho-UDP acetyl-beta-D-mannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D A4V11_07725 glycosyl transferase family 1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D A4V11_07730 glycosyl transferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D A4V11_03755 glycosyl transferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D A4V11_08905 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D A4V11_07305 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:paci01005] D A4V11_09650 glycosyl transferase K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-] D A4V11_08905 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D A4V11_05435 bactoprenol glucosyl transferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-] D A4V11_05460 bactoprenol glucosyl transferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:paci01011] D A4V11_05270 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A4V11_09160 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A4V11_00685 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D A4V11_02870 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A4V11_10125 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A4V11_03455 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4V11_05215 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A4V11_03215 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D A4V11_02875 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A4V11_02865 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D A4V11_10045 phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D A4V11_01580 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4V11_00615 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D A4V11_02880 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B D A4V11_00890 penicillin-binding protein K21465 pbpA; penicillin-binding protein A D A4V11_06035 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A4V11_02750 cell wall hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D A4V11_06105 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D A4V11_05250 class A sortase K07284 srtA; sortase A [EC:3.4.22.70] D A4V11_00870 ABC transporter substrate-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D A4V11_02405 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:paci01004] D A4V11_01225 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A4V11_01215 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D A4V11_04970 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D A4V11_01235 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4V11_01230 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_03335 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_01485 NAD(P)-dependent dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4V11_01210 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A4V11_01245 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A4V11_01265 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A4V11_08180 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D A4V11_01125 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D A4V11_01830 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D A4V11_01305 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:paci01008] D A4V11_10135 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:paci01006] D A4V11_01025 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D A4V11_01345 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D A4V11_00925 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:paci01007] D A4V11_04910 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D A4V11_07800 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A4V11_07865 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D A4V11_04905 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A4V11_00600 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A4V11_07900 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A4V11_02830 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A4V11_03390 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A4V11_10050 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A4V11_05130 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A4V11_02395 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A4V11_09265 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D A4V11_02400 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A4V11_02325 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A4V11_02320 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A4V11_04635 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A4V11_01360 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A4V11_00725 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A4V11_03250 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A4V11_00860 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A4V11_00865 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A4V11_02460 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D A4V11_05975 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D A4V11_08525 cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D A4V11_06755 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:paci00194] D A4V11_03525 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D A4V11_03530 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D A4V11_03535 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D A4V11_03540 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D A4V11_03545 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D A4V11_03550 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A4V11_03555 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D A4V11_03560 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:paci03000] D A4V11_08570 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D A4V11_08315 transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D A4V11_07390 DeoR family transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D A4V11_02765 lactose transport regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D A4V11_03185 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4V11_06680 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4V11_00435 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4V11_00525 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4V11_05930 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4V11_01710 hypothetical protein K26609 exuR; LacI family transcriptional regulator, galacturonate utilization repressor D A4V11_06430 LacI family transcriptional regulator K26609 exuR; LacI family transcriptional regulator, galacturonate utilization repressor D A4V11_00140 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D A4V11_09770 trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D A4V11_07970 GntR family transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA D A4V11_06395 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D A4V11_08535 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D A4V11_09390 UbiC family transcriptional regulator K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator D A4V11_05050 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D A4V11_06305 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D A4V11_06855 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D A4V11_09205 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D A4V11_00935 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D A4V11_06595 transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D A4V11_08740 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D A4V11_08410 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D A4V11_00305 hypothetical protein K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D A4V11_08820 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D A4V11_08010 arginine deiminase K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator D A4V11_00605 cAMP-binding protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator D A4V11_09250 PadR family transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator D A4V11_06710 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D A4V11_08700 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D A4V11_08040 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D A4V11_07595 transcriptional regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D A4V11_04755 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D A4V11_03860 transcriptional regulator K07727 K07727; putative transcriptional regulator D A4V11_09525 transcriptional regulator K07727 K07727; putative transcriptional regulator D A4V11_02455 transcriptional regulator K07729 K07729; putative transcriptional regulator D A4V11_06770 transcriptional regulator K07729 K07729; putative transcriptional regulator D A4V11_03955 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D A4V11_02120 PTS sugar transporter K03488 licT; beta-glucoside operon transcriptional antiterminator D A4V11_06765 hypothetical protein K03488 licT; beta-glucoside operon transcriptional antiterminator D A4V11_09750 transcriptional antiterminator K03491 licR; probable licABCH operon transcriptional regulator D A4V11_06075 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4V11_00610 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism D A4V11_01035 DNA-binding protein K03402 argR; transcriptional regulator of arginine metabolism D A4V11_01410 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D A4V11_09610 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D A4V11_04590 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D A4V11_07885 PspC family transcriptional regulator K03973 pspC; phage shock protein C D A4V11_08980 stress-responsive transcriptional regulator K03973 pspC; phage shock protein C D A4V11_09075 SorC family transcriptional regulator K05311 cggR; central glycolytic genes regulator D A4V11_07655 RNA polymerase subunit sigma-70 K05346 deoR; deoxyribonucleoside regulator D A4V11_01635 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D A4V11_00710 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D A4V11_02895 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:paci03021] D A4V11_06100 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D A4V11_04415 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A4V11_04580 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A4V11_04575 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A4V11_05280 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta D A4V11_01055 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A4V11_02310 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D A4V11_04890 competence protein ComX K27000 sigH; RNA polymerase sigma-H factor D A4V11_09070 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D A4V11_01375 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D A4V11_01005 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D A4V11_04880 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D A4V11_03645 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D A4V11_00880 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D A4V11_05265 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:paci03019] D A4V11_01135 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A4V11_02660 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-] D A4V11_02745 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D A4V11_04695 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D A4V11_03310 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D A4V11_09110 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D A4V11_00635 3'-5' exonuclease K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D A4V11_05225 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A4V11_03255 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D A4V11_02235 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A4V11_09615 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A4V11_09095 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4V11_06005 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4V11_05265 transcription termination factor Rho K03628 rho; transcription termination factor Rho D A4V11_02285 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D A4V11_01420 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A4V11_08895 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4V11_09035 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:paci03011] D A4V11_02220 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D A4V11_01325 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D A4V11_04510 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D A4V11_03420 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D A4V11_04460 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D A4V11_06920 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D A4V11_04555 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D A4V11_04475 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D A4V11_04135 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D A4V11_04545 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D A4V11_04420 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D A4V11_04560 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D A4V11_04425 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D A4V11_07705 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D A4V11_02665 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D A4V11_01160 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D A4V11_04495 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D A4V11_06930 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D A4V11_04520 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D A4V11_02670 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D A4V11_02360 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D A4V11_04870 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D A4V11_04525 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D A4V11_04540 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D A4V11_04535 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D A4V11_04480 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D A4V11_04470 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D A4V11_06940 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D A4V11_04865 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D A4V11_04875 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D A4V11_04860 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D A4V11_04140 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D A4V11_04490 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D A4V11_04450 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D A4V11_04505 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D A4V11_04410 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D A4V11_04465 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D A4V11_01185 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D A4V11_00760 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D A4V11_00980 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D A4V11_04515 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D A4V11_04530 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D A4V11_04485 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D A4V11_00990 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D A4V11_01105 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A4V11_04500 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D A4V11_04455 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D A4V11_05260 rpmE2; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D A4V11_06885 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D A4V11_00755 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D A4V11_04430 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D A4V11_03045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_07330 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_07820 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_09925 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_05100 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_03055 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_07320 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_05120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_09905 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_07810 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_03050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_09920 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_05105 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_07325 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_07815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:paci03009] D A4V11_01135 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A4V11_02335 era; GTPase Era K03595 era; GTPase D A4V11_02610 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D A4V11_01375 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D A4V11_01005 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D A4V11_04880 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D A4V11_10060 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D A4V11_07915 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D A4V11_01075 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D A4V11_04840 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D A4V11_02700 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D A4V11_02430 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D A4V11_06080 16S rRNA methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A4V11_02890 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D A4V11_04790 rRNA (cytidine-2'-O-)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D A4V11_01030 cell division protein FtsJ K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D A4V11_06415 SAM-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D A4V11_04895 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D A4V11_06780 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D A4V11_04025 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D A4V11_02245 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D A4V11_04705 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D A4V11_02940 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D A4V11_08550 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D A4V11_01630 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D A4V11_04770 ribosomal-protein-alanine N-acetyltransferase RimI K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D A4V11_01165 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D A4V11_02435 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D A4V11_03240 crossover junction endodeoxyribonuclease RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D A4V11_04900 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D A4V11_05225 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A4V11_03255 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D A4V11_01090 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D A4V11_02215 engA; ribosome biogenesis GTPase Der K03977 engA; GTPase D A4V11_01870 rbgA; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D A4V11_08775 GTPase HflX K03665 hflX; GTPase D A4V11_00770 ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase D A4V11_03585 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D A4V11_02420 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D A4V11_01395 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D A4V11_01370 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D A4V11_06900 RNA-binding protein K14761 rlbA; ribosome-associated protein D A4V11_00790 ribosome silencing factor RsfS K09710 ybeB; ribosome-associated protein D A4V11_02345 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor D A4V11_00775 RNA-binding protein K07574 yhbY; RNA-binding protein D A4V11_08925 Fis family transcriptional regulator K05808 hpf; ribosome hibernation promoting factor D A4V11_06065 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D A4V11_00805 metal-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:paci03016] D A4V11_02600 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D A4V11_02185 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D A4V11_01360 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A4V11_02830 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A4V11_10050 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A4V11_07900 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A4V11_00600 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A4V11_05130 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A4V11_02395 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A4V11_03250 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A4V11_09265 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D A4V11_00725 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A4V11_04635 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A4V11_04905 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A4V11_03390 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A4V11_02400 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A4V11_00860 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A4V11_00865 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A4V11_07800 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A4V11_07865 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D A4V11_02415 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D A4V11_00650 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A4V11_00665 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D A4V11_04145 tRNA pseudouridine(38,39,40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D A4V11_01400 tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D A4V11_03405 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4V11_02805 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4V11_03585 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D A4V11_00925 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D A4V11_06870 tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D A4V11_06865 tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D A4V11_06880 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D A4V11_01600 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA D A4V11_02325 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A4V11_02320 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A4V11_04910 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D A4V11_08530 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D A4V11_06630 prolyl-tRNA editing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D A4V11_04835 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D A4V11_05135 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D A4V11_01170 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D A4V11_02305 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D A4V11_02910 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D A4V11_00845 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D A4V11_02795 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D A4V11_03285 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D A4V11_03280 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D A4V11_03400 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D A4V11_05155 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D A4V11_04775 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D A4V11_04765 tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D A4V11_09140 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D A4V11_00800 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D A4V11_09110 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C 03012 Translation factors [BR:paci03012] D A4V11_01390 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D A4V11_00750 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D A4V11_01330 elongation factor Ts K02357 tsf; elongation factor Ts D A4V11_02650 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A4V11_04550 fusA; elongation factor G K02355 fusA; elongation factor G D A4V11_03595 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D A4V11_01340 ribosome recycling factor K02838 frr; ribosome recycling factor D A4V11_03590 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D A4V11_05185 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D A4V11_04435 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D A4V11_00995 elongation factor P K02356 efp; elongation factor P D A4V11_03145 elongation factor P K02356 efp; elongation factor P D A4V11_08935 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D A4V11_03805 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:paci03110] D A4V11_02295 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D A4V11_04585 ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D A4V11_09865 ATP-dependent Clp protease ATP-binding subunit K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE D A4V11_01910 ATP-dependent Clp protease ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL D A4V11_02640 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D A4V11_01840 HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D A4V11_01420 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A4V11_08895 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4V11_01425 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D A4V11_05140 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33 D A4V11_01415 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D A4V11_05700 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein D A4V11_08890 co-chaperone GroES K04078 groES; chaperonin GroES D A4V11_06545 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4V11_05145 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A4V11_03560 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A4V11_07625 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D A4V11_00640 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D A4V11_03225 thiol reductase thioredoxin K03671 TXN; thioredoxin D A4V11_08660 thiol reductase thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:paci04131] D A4V11_02060 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A4V11_05710 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A4V11_09080 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A4V11_06000 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4V11_04945 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4V11_02280 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:paci03032] D A4V11_08260 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D A4V11_02210 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D A4V11_06890 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D A4V11_06945 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D A4V11_04335 DNA replication protein K02315 dnaC; DNA replication protein DnaC D A4V11_02315 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D A4V11_00715 replication initiation and membrane attachment family protein K03346 dnaB; replication initiation and membrane attachment protein D A4V11_00720 primosomal protein DnaI K11144 dnaI; primosomal protein DnaI D A4V11_06925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_04350 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_02290 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A4V11_01365 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D A4V11_06895 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4V11_02675 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A4V11_04800 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A4V11_09150 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A4V11_04825 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A4V11_01865 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D A4V11_00695 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4V11_05470 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A4V11_06915 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D A4V11_06910 gyrB; DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D A4V11_01820 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A4V11_01825 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D A4V11_01855 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:paci03036] D A4V11_01135 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A4V11_02210 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D A4V11_06890 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D A4V11_01140 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D A4V11_02255 chromosome segregation protein ScpA K05896 scpA; segregation and condensation protein A D A4V11_02250 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D A4V11_02855 cell division protein FtsA K03590 ftsA; cell division protein FtsA D A4V11_05165 septum formation initiator K13052 divIC; cell division protein DivIC D A4V11_00680 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D A4V11_02905 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D A4V11_02885 cell division protein FtsL K03586 ftsL; cell division protein FtsL D A4V11_02860 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D A4V11_02710 cell division protein FtsW K03588 ftsW; cell division protein FtsW D A4V11_02850 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A4V11_02405 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A4V11_03410 septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator D A4V11_02835 cell division protein K04074 divIVA; cell division initiation protein D A4V11_03375 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D A4V11_03370 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D A4V11_03505 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D A4V11_06075 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4V11_01820 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A4V11_01825 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D A4V11_06865 tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D A4V11_06080 16S rRNA methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A4V11_01850 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D A4V11_02265 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D A4V11_02635 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein D A4V11_09045 sporulation regulator WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:paci03400] D A4V11_09135 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D A4V11_06100 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D A4V11_04925 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D A4V11_06050 cysteine methyltransferase K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D A4V11_03445 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D A4V11_06805 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D A4V11_00700 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A4V11_05475 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A4V11_02375 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D A4V11_02590 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A4V11_05470 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A4V11_00695 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4V11_01805 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D A4V11_09030 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D A4V11_09025 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D A4V11_02615 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D A4V11_04055 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4V11_08795 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4V11_07860 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4V11_04580 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A4V11_04575 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A4V11_04415 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A4V11_05280 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta D A4V11_01055 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A4V11_05180 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A4V11_03305 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D A4V11_03230 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D A4V11_05485 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 D A4V11_03300 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D A4V11_01015 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D A4V11_01020 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D A4V11_02290 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A4V11_01365 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D A4V11_06895 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4V11_02675 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A4V11_04800 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A4V11_09150 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A4V11_04825 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A4V11_06925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_04350 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_02780 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D A4V11_03315 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D A4V11_03295 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D A4V11_03290 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D A4V11_01065 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D A4V11_04920 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D A4V11_06905 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D A4V11_01120 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D A4V11_02330 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D A4V11_04815 recombination protein RecR K06187 recR; recombination protein RecR D A4V11_01040 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D A4V11_01585 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U D A4V11_06785 helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D A4V11_06790 ATP-dependent helicase K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D A4V11_08870 subtype II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D A4V11_06915 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D A4V11_06910 gyrB; DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D A4V11_01855 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D A4V11_02210 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D A4V11_02235 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A4V11_09615 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A4V11_03265 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D A4V11_04105 excinuclease ABC subunit A K03502 umuC; DNA polymerase V D A4V11_01290 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D A4V11_03825 recombinase RecX K03565 recX; regulatory protein D A4V11_01565 DNA polymerase III subunit epsilon K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D A4V11_04850 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A4V11_04855 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D A4V11_03260 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:paci03029] D A4V11_01390 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D A4V11_00750 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D A4V11_01330 elongation factor Ts K02357 tsf; elongation factor Ts D A4V11_02650 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A4V11_04550 fusA; elongation factor G K02355 fusA; elongation factor G D A4V11_02335 era; GTPase Era K03595 era; GTPase D A4V11_07800 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A4V11_10050 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A4V11_02395 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A4V11_00600 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A4V11_04040 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A4V11_04035 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D A4V11_04045 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D A4V11_06925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_04350 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4V11_01420 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A4V11_01415 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D A4V11_08895 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4V11_08890 co-chaperone GroES K04078 groES; chaperonin GroES D A4V11_01425 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D A4V11_03405 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4V11_02805 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4V11_00835 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4V11_06875 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:paci02000] D A4V11_05780 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D A4V11_03630 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D A4V11_03625 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D A4V11_02480 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A4V11_06970 ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D A4V11_02180 multidrug ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D A4V11_09505 glycoside:cation symporter K11070 potC; spermidine/putrescine transport system permease protein D A4V11_05755 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D A4V11_07840 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein D A4V11_05750 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D A4V11_05760 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D A4V11_05765 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D A4V11_07845 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D A4V11_01180 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein D A4V11_01175 ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D A4V11_08950 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A4V11_08955 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D A4V11_08960 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D A4V11_08965 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A4V11_08970 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A4V11_08760 glutamine ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D A4V11_08765 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D A4V11_08770 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D A4V11_08755 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D A4V11_02625 ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D A4V11_02620 glnQ; glutamine ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D A4V11_03490 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D A4V11_03495 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D A4V11_03500 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D A4V11_07965 peptide ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D A4V11_07960 branched-chain amino acid ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D A4V11_07955 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D A4V11_03355 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4V11_03365 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4V11_03360 polar amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D A4V11_05390 BioY protein K03523 bioY; biotin transport system substrate-specific component D A4V11_08200 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component D A4V11_09280 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D A4V11_04150 cobalt ABC transporter ATP-binding protein K16785 ecfT; energy-coupling factor transport system permease protein D A4V11_08190 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D A4V11_04160 cbiO; energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D A4V11_04155 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D A4V11_08195 cobalt ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D A4V11_09285 ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D A4V11_09290 ABC transporter permease K16925 ykoE; energy-coupling factor transport system permease protein D A4V11_08025 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D A4V11_08035 ABC transporter K02075 ABC.ZM.P; zinc/manganese transport system permease protein D A4V11_08030 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D A4V11_09310 multidrug ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein D A4V11_09315 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D A4V11_05450 Teichoic acid translocation permease TagG K09692 tagG; teichoic acid transport system permease protein D A4V11_05445 teichoic acid ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D A4V11_01900 lantibiotic ABC transporter permease K20491 nisE; lantibiotic transport system permease protein D A4V11_02010 hypothetical protein K20491 nisE; lantibiotic transport system permease protein D A4V11_01895 lantibiotic ABC transporter permease K20492 nisG; lantibiotic transport system permease protein D A4V11_02005 hypothetical protein K20492 nisG; lantibiotic transport system permease protein D A4V11_01905 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D A4V11_02015 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D A4V11_08490 ABC transporter K25149 narB; polyether ionophore transport system permease protein D A4V11_08485 ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein D A4V11_00660 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein D A4V11_00655 multidrug ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein D A4V11_05880 antibiotic ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D A4V11_02565 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D A4V11_06130 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D A4V11_04725 sodium ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D A4V11_01450 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D A4V11_01455 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D A4V11_03480 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A4V11_07205 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A4V11_05885 glycosyl transferase family 2 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A4V11_02570 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A4V11_06135 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A4V11_04730 sodium ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A4V11_01445 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A4V11_03565 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D A4V11_06980 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D A4V11_06175 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D A4V11_08055 permease K02004 ABC.CD.P; putative ABC transport system permease protein D A4V11_05740 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A4V11_03570 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A4V11_06985 peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A4V11_06170 bacitracin ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A4V11_08060 hemin ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A4V11_06725 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A4V11_09330 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D A4V11_05340 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D A4V11_09460 MFS transporter K06609 iolT; MFS transporter, SP family, major inositol transporter D A4V11_00825 sugar transporter K06610 iolF; MFS transporter, SP family, inositol transporter D A4V11_07665 MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease D A4V11_01465 permease K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D A4V11_07415 cyanate permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D A4V11_05670 MFS transporter K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein D A4V11_05255 multidrug transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D A4V11_07945 multidrug MFS transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D A4V11_09880 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D A4V11_09875 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D A4V11_09755 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A4V11_06750 PTS glucose transporter subunit IIABC K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D A4V11_08520 PTS maltose transporter subunit IIABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D A4V11_06760 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D A4V11_07470 permease K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D A4V11_09765 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D A4V11_02115 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D A4V11_00115 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D A4V11_02755 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D A4V11_07430 PTS fructose transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D A4V11_07980 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D A4V11_09740 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D A4V11_06660 PTS sugar transporter K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D A4V11_09730 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D A4V11_07975 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D A4V11_06675 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D A4V11_07000 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D A4V11_00075 PTS glucose transporter subunit IIABC K02761 celB; cellobiose PTS system EIIC component D A4V11_09735 protein-N(pi)-phosphohistidine--sugar phosphotransferase K02761 celB; cellobiose PTS system EIIC component D A4V11_07770 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component D A4V11_06385 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D A4V11_06670 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D A4V11_06835 PTS sugar transporter subunit IIA K02761 celB; cellobiose PTS system EIIC component D A4V11_02920 glucitol/sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D A4V11_07385 PTS sugar transporter subunit IIA K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204] D A4V11_07380 PTS fructose transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204] D A4V11_07375 PTS glucitol transporter subunit IIA K20114 gatC; galactose PTS system EIIC component D A4V11_05005 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D A4V11_09240 PTS mannose transporter subunit IID K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4V11_06330 PTS sugar transporter K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4V11_00255 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_00445 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_05000 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_06315 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D A4V11_00260 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_00450 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_04995 PTS mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_06310 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component D A4V11_07600 PTS mannose transporter subunit IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-] D A4V11_09215 PTS sugar transporter K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-] D A4V11_07605 PTS sugar transporter K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-] D A4V11_09220 PTS sugar transporter K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component D A4V11_07610 PTS lactose transporter subunit IIBC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component D A4V11_09225 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component D A4V11_07615 PTS mannose transporter subunit IIAB K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component D A4V11_00330 hypothetical protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D A4V11_00315 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D A4V11_00320 PTS N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D A4V11_00325 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D A4V11_08435 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D A4V11_08440 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D A4V11_00110 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D A4V11_05790 PTS mannnose family transporter subunit IIA K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D A4V11_08230 aquaporin K06188 aqpZ; aquaporin Z D A4V11_05555 aquaporin K02440 glpF; glycerol uptake facilitator D A4V11_03180 aquaporin K02440 glpF; glycerol uptake facilitator D A4V11_08235 potassium transporter Kef K10716 kch; voltage-gated potassium channel D A4V11_06695 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel D A4V11_03205 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel D A4V11_02935 magnesium transporter K06213 mgtE; magnesium transporter D A4V11_07440 magnesium transporter K03284 corA; magnesium transporter D A4V11_09510 magnesium transporter CorA K03284 corA; magnesium transporter D A4V11_08650 magnesium transporter K03284 corA; magnesium transporter D A4V11_01665 camphor resistance protein CrcB K06199 crcB; fluoride exporter D A4V11_01670 camphor resistance protein CrcB K06199 crcB; fluoride exporter D A4V11_09580 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein D A4V11_02535 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein D A4V11_08495 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D A4V11_00740 murein hydrolase regulator LrgA K05338 lrgA; holin-like protein D A4V11_08080 ethanolamine utilization protein EutM K27260 pduA; bacterial microcompartment shell protein D A4V11_00535 PTS sugar transporter subunit IIA K16209 lacS; lactose/raffinose/galactose permease D A4V11_00475 MFS transporter K16210 togT; oligogalacturonide transporter D A4V11_04645 gamma-aminobutyrate permease K11733 lysP; lysine-specific permease D A4V11_07035 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D A4V11_08005 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D A4V11_07570 amino acid:proton antiporter K20265 gadC; glutamate:GABA antiporter D A4V11_06195 glutamate:gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter D A4V11_04680 cobalt transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D A4V11_06685 quaternary ammonium transporter K03297 emrE; small multidrug resistance pump D A4V11_07060 supressor protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE D A4V11_03685 glucose transporter GlcU K05340 glcU; glucose uptake protein D A4V11_05915 ribose transporter RbsU K06216 rbsU; putative ribose uptake protein D A4V11_01800 gluconate:proton symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D A4V11_03725 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D A4V11_00350 gluconate:proton symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D A4V11_07120 glutamate/aspartate:proton symporter GltP K11102 gltP; proton glutamate symport protein D A4V11_06815 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D A4V11_08615 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D A4V11_07855 sodium:proton antiporter K26730 napA; Na+:H+ antiporter D A4V11_02440 uracil permease K02824 uraA; uracil permease D A4V11_04715 Uric acid permease PucJ K16169 pbuX; xanthine permease D A4V11_06800 Uric acid permease PucJ K16169 pbuX; xanthine permease D A4V11_07650 permease K06901 pbuG; adenine/guanine/hypoxanthine permease D A4V11_08255 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D A4V11_08715 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D A4V11_07645 nucleoside permease K16323 yxjA; purine nucleoside transport protein D A4V11_06095 nucleoside permease K16323 yxjA; purine nucleoside transport protein D A4V11_05525 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family D A4V11_07150 divalent metal cation transporter K03322 mntH; manganese transport protein D A4V11_05935 divalent metal cation transporter K03322 mntH; manganese transport protein D A4V11_05500 malate permease K24180 mleP; malate permease and related proteins D A4V11_08325 malate transporter K24180 mleP; malate permease and related proteins D A4V11_06030 branched-chain amino acid ABC transporter K26605 azlC; branched chain amino acid efflux pump D A4V11_06025 branched-chain amino acid transporter K26606 azlD; branched chain amino acid efflux pump D A4V11_05400 hypothetical protein K23675 fmnP; riboflavin transporter D A4V11_04710 thiamine biosynthesis protein ThiW K23675 fmnP; riboflavin transporter D A4V11_07140 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D A4V11_07145 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D A4V11_09355 hypothetical protein K05595 marC; multiple antibiotic resistance protein D A4V11_02710 cell division protein FtsW K03588 ftsW; cell division protein FtsW D A4V11_09635 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D A4V11_09630 chain-length determining protein K19420 epsA; protein tyrosine kinase modulator D A4V11_07255 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D A4V11_01430 sensory protein K05770 TSPO; translocator protein D A4V11_07480 methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:paci02044] D A4V11_02845 cell division protein K02221 yggT; YggT family protein D A4V11_02690 transporter K02237 comEA; competence protein ComEA D A4V11_02685 competence protein ComE K01493 comEB; dCMP deaminase [EC:3.5.4.12] D A4V11_02680 MBL fold hydrolase K02238 comEC; competence protein ComEC D A4V11_08915 competence protein ComF K02240 comFA; competence protein ComFA D A4V11_08920 amidophosphoribosyltransferase K02242 comFC; competence protein ComFC D A4V11_03125 competence protein ComGA K02243 comGA; competence protein ComGA D A4V11_03120 type II secretory pathway protein K02244 comGB; competence protein ComGB D A4V11_03115 competence protein ComGC K02245 comGC; competence protein ComGC D A4V11_03110 prepilin-type N-terminal cleavage/methylation domain-containing protein K02246 comGD; competence protein ComGD D A4V11_04565 prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D A4V11_08930 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4V11_03780 accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4V11_04885 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A4V11_09105 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A4V11_03775 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4V11_04445 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4V11_01155 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A4V11_01145 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A4V11_00335 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D A4V11_03275 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A4V11_00835 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4V11_06875 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4V11_03770 accessory Sec system protein Asp1 K12268 asp1; accessory secretory protein Asp1 D A4V11_03765 accessory Sec system protein Asp2 K12269 asp2; accessory secretory protein Asp2 D A4V11_03760 accessory Sec system protein Asp3 K12270 asp3; accessory secretory protein Asp3 C 02042 Bacterial toxins [BR:paci02042] D A4V11_08495 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D A4V11_07070 hemolysin III K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:paci02022] D A4V11_08945 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D A4V11_08940 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D A4V11_06565 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D A4V11_06570 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D A4V11_00820 two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D A4V11_00815 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D A4V11_03700 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D A4V11_06125 two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D A4V11_06120 DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR D A4V11_00730 histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3] D A4V11_00735 DNA-binding response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT D A4V11_09305 response regulator K02477 K02477; two-component system, LytTR family, response regulator D A4V11_07015 two-component system response regulator K07719 glnL; two-component system, response regulator GlnL C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:paci04812] D A4V11_02850 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A4V11_02855 cell division protein FtsA K03590 ftsA; cell division protein FtsA D A4V11_06075 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:paci04147] D A4V11_09095 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4V11_06005 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4V11_09080 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A4V11_09085 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A4V11_02280 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A4V11_08895 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4V11_01420 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A4V11_03680 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A4V11_06055 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D A4V11_02650 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A4V11_00650 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A4V11_07695 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D A4V11_05190 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D A4V11_01885 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4V11_04440 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D A4V11_02585 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D A4V11_06655 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D A4V11_07340 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D A4V11_00550 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D A4V11_05545 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D A4V11_08205 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D A4V11_00940 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4V11_01950 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A4V11_06360 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4V11_03270 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A4V11_09090 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A4V11_06000 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4V11_04945 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:paci02048] D A4V11_08870 subtype II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D A4V11_08875 CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D A4V11_08865 type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D A4V11_09545 restriction endonuclease subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5] D A4V11_09540 DNA methylase N-4 K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D A4V11_07195 PemK family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D A4V11_07500 cell division protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D A4V11_05205 PemK family transcriptional regulator K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D A4V11_07190 AbrB family transcriptional regulator K19156 prlF; antitoxin PrlF D A4V11_03960 addiction module toxin RelE K06218 relE; mRNA interferase RelE/StbE D A4V11_03955 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D A4V11_07885 PspC family transcriptional regulator K03973 pspC; phage shock protein C D A4V11_08980 stress-responsive transcriptional regulator K03973 pspC; phage shock protein C D A4V11_02850 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A4V11_01820 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A4V11_01825 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D A4V11_03405 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4V11_02805 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:paci01504] D A4V11_06970 ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D A4V11_07225 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D A4V11_05385 D-alanine--poly(phosphoribitol) ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D A4V11_05380 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D A4V11_05375 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D A4V11_05370 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein D A4V11_05780 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:paci03100] D A4V11_09915 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A4V11_07275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A4V11_05110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A4V11_04605 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_09855 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_09955 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_00965 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_04610 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_09065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4V11_03040 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A4V11_05095 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A4V11_03020 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A4V11_10020 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A4V11_09985 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A4V11_02995 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D A4V11_05070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A4V11_03655 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A4V11_06205 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A4V11_03030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4V11_03650 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4V11_06210 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4V11_10010 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4V11_04615 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A4V11_00590 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A4V11_09945 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A4V11_09995 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A4V11_03005 tRNA-His K14226 tRNA-His; tRNA His D A4V11_09910 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A4V11_05115 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A4V11_10000 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A4V11_03000 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4V11_09950 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4V11_04625 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4V11_05010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4V11_10115 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4V11_06575 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A4V11_09935 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A4V11_10015 tRNA-Met K14230 tRNA-Met; tRNA Met D A4V11_09965 tRNA-Met K14230 tRNA-Met; tRNA Met D A4V11_09970 tRNA-Met K14230 tRNA-Met; tRNA Met D A4V11_09980 tRNA-Met K14230 tRNA-Met; tRNA Met D A4V11_03015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D A4V11_09990 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D A4V11_04600 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A4V11_09960 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A4V11_10005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A4V11_09975 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A4V11_02515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A4V11_03035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A4V11_09940 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A4V11_04620 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A4V11_05090 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A4V11_07825 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A4V11_04285 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D A4V11_03010 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D A4V11_05075 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D A4V11_04630 tRNA-Val K14237 tRNA-Val; tRNA Val D A4V11_09930 tRNA-Val K14237 tRNA-Val; tRNA Val D A4V11_03025 tRNA-Val K14237 tRNA-Val; tRNA Val D A4V11_03055 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_07320 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_05120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_09905 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_07810 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4V11_03050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_09920 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_05105 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_07325 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_07815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4V11_03045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_07330 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_07820 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_09925 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_05100 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4V11_04830 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D A4V11_01600 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA D A4V11_09570 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D A4V11_07265 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D A4V11_07270 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D A4V11_05520 oxidoreductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-] D A4V11_07335 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D A4V11_02510 lactate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2] D A4V11_06585 oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D A4V11_07750 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D A4V11_01785 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D A4V11_01790 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D A4V11_07350 manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D A4V11_09885 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D A4V11_03395 2-Cys peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D A4V11_09585 chitin-binding protein K21713 lpmo; lytic chitin monoxygenase [EC:1.14.99.53] D A4V11_08625 ferredoxin--NADP(+) reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D A4V11_09325 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D A4V11_06015 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D A4V11_01605 RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D A4V11_07565 putrescine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6] D A4V11_05865 acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D A4V11_05685 galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D A4V11_06580 transferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D A4V11_06740 acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D A4V11_06020 acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D A4V11_09665 hypothetical protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D A4V11_06490 GlcNAc transferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D A4V11_08995 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D A4V11_07425 1-phosphofructokinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234] D A4V11_01115 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D A4V11_02365 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D A4V11_03900 XRE family transcriptional regulator K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7] D A4V11_09165 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D A4V11_08990 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D A4V11_07050 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22] D A4V11_06340 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D A4V11_09625 serine hydrolase K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103] D A4V11_09640 tyrosine protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D A4V11_08175 protein tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D A4V11_08465 protein tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D A4V11_08470 protein tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D A4V11_00765 HAD family hydrolase K07015 yqeG; putative phosphatase [EC:3.1.3.-] D A4V11_06935 hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D A4V11_07905 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D A4V11_07910 ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D A4V11_00205 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D A4V11_07515 alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D A4V11_00310 glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180] D A4V11_00420 glycosyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180] D A4V11_09725 cell wall surface anchor family protein K03931 ygjK; glucosidase [EC:3.2.1.-] D A4V11_04170 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A4V11_05860 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D A4V11_02730 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D A4V11_09245 phenolic acid decarboxylase padC K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-] D A4V11_09190 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53] D A4V11_00220 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D A4V11_10130 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12] D A4V11_05030 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D A4V11_08835 HAD family hydrolase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D A4V11_01700 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D A4V11_09230 glucosamine--fructose-6-phosphate aminotransferase K19504 gfrE; glucoselysine-6-phosphate deglycase D A4V11_09235 glucosamine-fructose-6-phosphate aminotransferase K19510 gfrF; fructoselysine-6-phosphate deglycase D A4V11_08105 diol dehydratase reactivase subunit alpha K27264 pduG; propanediol dehydratase-reactivating factor large subunit D A4V11_08110 propanediol dehydratase K27265 pduH; propanediol dehydratase-reactivating factor small subunit C 99982 Energy metabolism D A4V11_09345 iron-sulfur cluster assembly scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins C 99983 Lipid metabolism D A4V11_01660 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit D A4V11_02160 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D A4V11_08475 ribonucleotide reductase assembly protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction D A4V11_09775 hydroxyacid dehydrogenase K15051 endA; DNA-entry nuclease D A4V11_10140 DNA-entry nuclease K15051 endA; DNA-entry nuclease C 99985 Amino acid metabolism D A4V11_08075 ethanolamine utilization protein EutP K04029 eutP; ethanolamine utilization protein EutP D A4V11_08165 propanediol utilization protein K04031 eutS; ethanolamine utilization protein EutS D A4V11_08385 hypothetical protein K08234 yaeR; glyoxylase I family protein C 99986 Glycan metabolism D A4V11_09900 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism D A4V11_07010 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D A4V11_04675 cold-shock protein K03704 cspA; cold shock protein D A4V11_02825 cold-shock protein K03704 cspA; cold shock protein D A4V11_02975 transcriptional regulator Spx K16509 spxA; regulatory protein spx D A4V11_05020 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D A4V11_03060 RNA-binding protein K07570 GSP13; general stress protein 13 D A4V11_05160 RNA-binding protein S1 K07571 K07571; S1 RNA binding domain protein C 99975 Protein processing D A4V11_02645 tig; trigger factor K03545 tig; trigger factor D A4V11_09115 SsrA-binding protein K03664 smpB; SsrA-binding protein D A4V11_04845 NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH D A4V11_02970 adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D A4V11_03380 DNA repair protein K03630 radC; DNA repair protein RadC D A4V11_06215 DNA-3-methyladenine glycosylase K07457 K07457; endonuclease III related protein D A4V11_01315 hypothetical protein K07461 K07461; putative endonuclease D A4V11_01860 DNA processing protein DprA K04096 smf; DNA processing protein D A4V11_01575 DNA replication protein DnaD K02086 dnaD; DNA replication protein D A4V11_04275 terminase K07474 xtmA; phage terminase small subunit D A4V11_04270 terminase K06909 xtmB; phage terminase large subunit D A4V11_03425 recombinase RarA K07478 ycaJ; putative ATPase D A4V11_03910 DNA primase K06919 K06919; putative DNA primase/helicase D A4V11_03165 hypothetical protein K07483 K07483; transposase D A4V11_02960 transposase K07485 K07485; transposase D A4V11_03450 transposase K07485 K07485; transposase D A4V11_08280 transposase K07485 K07485; transposase D A4V11_01195 transposase K07485 K07485; transposase D A4V11_09100 transposase K07485 K07485; transposase D A4V11_09440 transposase K07485 K07485; transposase D A4V11_09715 transposase K07485 K07485; transposase D A4V11_09720 transposase K07485 K07485; transposase D A4V11_09820 transposase K07485 K07485; transposase D A4V11_09425 transposase K07493 K07493; putative transposase D A4V11_09450 transposase K07493 K07493; putative transposase D A4V11_09445 transposase K07497 K07497; putative transposase D A4V11_09485 integrase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D A4V11_04820 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D A4V11_00200 melibiose carrier protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D A4V11_05665 melibiose carrier protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D A4V11_06250 Na+/xyloside symporter related transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D A4V11_06465 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D A4V11_01715 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D A4V11_03465 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D A4V11_00175 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D A4V11_04120 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D A4V11_09810 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D A4V11_08725 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D A4V11_05680 glycine/betaine ABC transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D A4V11_05085 peptide ABC transporter permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D A4V11_10165 Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D A4V11_07830 hypothetical protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D A4V11_09400 allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D A4V11_04000 serine recombinase K06400 spoIVCA; site-specific DNA recombinase D A4V11_04005 DNA recombinase K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D A4V11_02715 GTP-binding protein TypA K06207 typA; GTP-binding protein D A4V11_02350 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D A4V11_09815 1,4-beta-N-acetylmuramidase K07273 acm; lysozyme D A4V11_08085 microcompartment protein PduB K27263 pduB; bacterial microcompartment shell protein D A4V11_08120 ethanolamine utilization protein EutM K27266 pduJ; bacterial microcompartment shell protein D A4V11_08115 propanediol utilization protein K27267 pduK; bacterial microcompartment shell protein D A4V11_08130 microcompartment protein PduM K27268 pduM; bacterial microcompartment assembly protein D A4V11_08135 ethanolamine utilization protein EutN K27269 pduN; bacterial microcompartment shell vertex protein C 99994 Others D A4V11_08975 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D A4V11_02930 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein B B 09194 Poorly characterized C 99996 General function prediction only D A4V11_09155 dehydrogenase K03810 mviM; virulence factor D A4V11_02475 GCN5 family acetyltransferase K02348 elaA; ElaA protein D A4V11_02965 competence protein K06198 coiA; competence protein CoiA D A4V11_00675 tRNA-binding protein K06878 K06878; tRNA-binding protein D A4V11_09200 haloacid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily D A4V11_09350 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D A4V11_09335 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D A4V11_08420 ribonuclease BN K07058 K07058; membrane protein D A4V11_05245 hypothetical protein K03744 lemA; LemA protein D A4V11_05015 SprT family protein K03095 sprL; SprT-like protein D A4V11_03065 cytochrome O ubiquinol oxidase K03975 dedA; membrane-associated protein D A4V11_08595 alkaline phosphatase K03975 dedA; membrane-associated protein D A4V11_06405 hypothetical protein K01421 yhgE; putative membrane protein D A4V11_08985 hypothetical protein K08972 K08972; putative membrane protein D A4V11_06960 hypothetical protein K08987 K08987; putative membrane protein C 99997 Function unknown D A4V11_02490 glucose starvation-inducible protein B K06884 K06884; uncharacterized protein D A4V11_05290 hypothetical protein K06885 K06885; uncharacterized protein D A4V11_07280 alpha/beta hydrolase K06889 K06889; uncharacterized protein D A4V11_06470 hypothetical protein K06889 K06889; uncharacterized protein D A4V11_08610 alpha/beta hydrolase K06889 K06889; uncharacterized protein D A4V11_00690 hypothetical protein K06890 K06890; uncharacterized protein D A4V11_00850 hydrolase K06950 K06950; uncharacterized protein D A4V11_04690 phosphohydrolase K06950 K06950; uncharacterized protein D A4V11_08815 sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein D A4V11_04930 acetyltransferase K06975 K06975; uncharacterized protein D A4V11_06590 4-oxalomesaconate hydratase K07045 K07045; uncharacterized protein D A4V11_07735 nitroreductase K07078 K07078; uncharacterized protein D A4V11_06965 permease K07090 K07090; uncharacterized protein D A4V11_03795 permease K07090 K07090; uncharacterized protein D A4V11_02595 short-chain dehydrogenase K07124 K07124; uncharacterized protein D A4V11_08565 hypothetical protein K07150 K07150; uncharacterized protein D A4V11_03515 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D A4V11_01205 sulfur relay protein TusB K09004 K09004; uncharacterized protein D A4V11_02355 hypothetical protein K09117 K09117; uncharacterized protein D A4V11_01435 DUF378 domain-containing protein K09779 K09779; uncharacterized protein D A4V11_01150 DNA-binding protein K09787 K09787; uncharacterized protein D A4V11_06745 hypothetical protein K09790 K09790; uncharacterized protein D A4V11_02270 DNA-binding protein K00243 K00243; uncharacterized protein D A4V11_06860 hypothetical protein K09861 K09861; uncharacterized protein D A4V11_07765 hypothetical protein K09963 K09963; uncharacterized protein D A4V11_06665 outer surface protein K09963 K09963; uncharacterized protein D A4V11_01300 hypothetical protein K09976 K09976; uncharacterized protein D A4V11_00985 hypothetical protein K07584 ysxB; uncharacterized protein D A4V11_03820 hypothetical protein K07586 ygaC; uncharacterized protein D A4V11_01380 DNA-binding protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 8, 2024