+F Chromosome and associated proteins KO
#
Chromosome and Associated Proteins - Paenibacillus sp. FSL R7-0273
%
!
AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E R70723_14820 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
D R70723_09165 membrane protein K07192 FLOT; flotillin
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
#
AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
C HU (heat unstable protein)
D R70723_00235 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D R70723_21400 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
C IHF (integration host factor)
C Other nucleoid associated proteins
D R70723_00005 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D R70723_04685 general stress protein K04047 dps; starvation-inducible DNA-binding protein
D R70723_09950 general stress protein K04047 dps; starvation-inducible DNA-binding protein
D R70723_13820 RNA chaperone Hfq K03666 hfq; host factor-I protein
D R70723_18360 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D R70723_11185 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R70723_05650 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
B Chromosome partitioning proteins
C MukBEF complex
C Condensin-like complex
D R70723_14825 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D R70723_21655 segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D R70723_21650 segregation protein A K06024 scpB; segregation and condensation protein B
C Divisome proteins
D R70723_24545 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D R70723_00255 hypothetical protein K13052 divIC; cell division protein DivIC
D R70723_30145 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D R70723_19285 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D R70723_03320 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D R70723_24600 hypothetical protein K03586 ftsL; cell division protein FtsL
D R70723_24550 cell division protein DivIB K03589 ftsQ; cell division protein FtsQ
D R70723_24565 stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D R70723_13510 stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D R70723_30140 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D R70723_24540 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D R70723_11720 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R70723_29445 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R70723_21060 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R70723_21065 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R70723_28880 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C Inhibitors of FtsZ assembly
D R70723_25935 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D R70723_25930 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D R70723_24485 septum formation initiator K04074 divIVA; cell division initiation protein
D R70723_24500 cell division protein SepF K09772 sepF; cell division inhibitor SepF
C Other chromosome partitioning proteins
D R70723_25950 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D R70723_30530 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D R70723_25945 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D R70723_25940 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D R70723_30650 cell cycle protein K05837 rodA; rod shape determining protein RodA
D R70723_30655 cell cycle protein K05837 rodA; rod shape determining protein RodA
D R70723_32505 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein
D R70723_32500 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R70723_32510 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R70723_20845 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D R70723_20850 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D R70723_32520 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D R70723_32515 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D R70723_19660 gid; tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D R70723_22025 recombinase XerD K04763 xerD; integrase/recombinase XerD
D R70723_17765 recombinase XerC K04763 xerD; integrase/recombinase XerD
D R70723_00230 hypothetical protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D R70723_29440 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D R70723_26235 GTP-binding protein K03978 engB; GTP-binding protein
D R70723_00840 sporulation regulator WhiA K09762 whiA; cell division protein WhiA
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024