+D GENES KO
#
KEGG Orthology (KO) - Paracoccus aerodenitrificans
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:paez00010]
D PAE61_16160 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PAE61_06410 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PAE61_03140 hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PAE61_08680 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PAE61_06520 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAE61_09015 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAE61_13510 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAE61_00635 type II glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D PAE61_08095 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PAE61_03675 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PAE61_06960 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAE61_11575 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAE61_06200 PEP-utilizing enzyme K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PAE61_04950 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAE61_07555 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PAE61_07550 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PAE61_07545 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PAE61_11465 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_02325 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PAE61_07910 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_09510 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_09880 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_10545 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAE61_13710 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:paez00020]
D PAE61_09590 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PAE61_12380 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PAE61_04040 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PAE61_06470 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PAE61_06465 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PAE61_11465 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06485 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAE61_06490 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAE61_12055 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAE61_12035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAE61_12065 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAE61_12060 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PAE61_14135 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PAE61_13460 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PAE61_12085 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAE61_07655 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PAE61_13710 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PAE61_04950 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAE61_07555 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PAE61_07550 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PAE61_07545 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:paez00030]
D PAE61_06410 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PAE61_06400 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PAE61_06405 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PAE61_16945 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PAE61_13005 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PAE61_10750 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PAE61_11400 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PAE61_07360 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PAE61_07610 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PAE61_03615 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PAE61_03195 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PAE61_10545 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAE61_02770 phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D PAE61_12090 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PAE61_00580 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PAE61_06385 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D PAE61_06420 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PAE61_14365 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D PAE61_16245 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D PAE61_16240 gluconate 2-dehydrogenase subunit 3 family protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D PAE61_01425 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D PAE61_01775 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PAE61_07760 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PAE61_06520 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAE61_08680 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PAE61_03140 hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:paez00040]
D PAE61_08575 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D PAE61_01770 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D PAE61_01765 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D PAE61_00870 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D PAE61_15240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PAE61_16810 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAE61_13005 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:paez00051]
D PAE61_06615 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PAE61_07810 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PAE61_07815 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PAE61_03140 hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PAE61_08680 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PAE61_06520 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAE61_09015 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAE61_13695 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PAE61_14810 HAD family phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C 00052 Galactose metabolism [PATH:paez00052]
D PAE61_16805 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAE61_16810 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAE61_10545 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAE61_16160 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PAE61_03140 hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PAE61_10515 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:paez00053]
D PAE61_15240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PAE61_14060 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_04995 mandelate racemase/muconate lactonizing enzyme family protein K18983 gci; D-galactarolactone cycloisomerase [EC:5.5.1.27]
C 00500 Starch and sucrose metabolism [PATH:paez00500]
D PAE61_10515 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PAE61_16810 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAE61_09995 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PAE61_10530 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PAE61_10535 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D PAE61_10525 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PAE61_10520 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PAE61_10540 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D PAE61_10545 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAE61_16160 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PAE61_06410 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PAE61_06615 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:paez00520]
D PAE61_07495 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PAE61_14235 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PAE61_14220 ATPase K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D PAE61_06615 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PAE61_14230 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAE61_03475 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAE61_06220 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PAE61_03480 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PAE61_14210 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PAE61_01355 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PAE61_06505 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PAE61_16025 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D PAE61_16020 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D PAE61_06340 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PAE61_13620 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PAE61_16160 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PAE61_10545 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAE61_16810 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAE61_15240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PAE61_10555 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D PAE61_16805 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAE61_14060 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PAE61_13695 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PAE61_06410 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PAE61_07815 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PAE61_07810 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PAE61_09995 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PAE61_10000 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D PAE61_10005 DegT/DnrJ/EryC1/StrS family aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D PAE61_10530 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:paez00620]
D PAE61_09510 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_09880 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_04950 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAE61_07555 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PAE61_07550 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PAE61_07545 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PAE61_11465 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_07910 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PAE61_02325 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PAE61_16845 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAE61_00730 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAE61_00735 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PAE61_11575 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAE61_13305 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PAE61_01980 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PAE61_01975 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PAE61_11520 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_02870 FAD-binding protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D PAE61_06125 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PAE61_09635 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PAE61_11225 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PAE61_07780 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PAE61_03180 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PAE61_07655 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PAE61_12085 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAE61_14135 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PAE61_13460 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PAE61_13710 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PAE61_06200 PEP-utilizing enzyme K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PAE61_01310 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_08690 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PAE61_11195 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:paez00630]
D PAE61_04000 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D PAE61_09510 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_09880 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_01310 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D PAE61_12085 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAE61_09590 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PAE61_12380 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02590 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D PAE61_11895 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D PAE61_11865 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PAE61_10955 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D PAE61_10950 FAD-binding protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D PAE61_10945 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D PAE61_10265 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D PAE61_11225 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PAE61_13000 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PAE61_03485 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PAE61_05920 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PAE61_09525 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PAE61_01435 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03430 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_09240 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAE61_07105 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAE61_13870 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PAE61_13880 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAE61_11465 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_13875 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PAE61_07760 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PAE61_06420 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PAE61_08335 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PAE61_08340 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PAE61_08345 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D PAE61_07390 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:paez00640]
D PAE61_09510 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_09880 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_03175 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PAE61_16845 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAE61_00730 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAE61_00735 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PAE61_11465 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06650 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PAE61_13305 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PAE61_01980 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PAE61_01975 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PAE61_11520 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PAE61_15660 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAE61_08605 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PAE61_11895 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D PAE61_11865 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PAE61_06490 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAE61_06485 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAE61_13550 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PAE61_13370 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D PAE61_13375 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D PAE61_13365 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:paez00650]
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_13675 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PAE61_06265 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PAE61_04435 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PAE61_06650 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PAE61_07705 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D PAE61_17550 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D PAE61_07400 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D PAE61_00740 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D PAE61_07395 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D PAE61_02590 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D PAE61_16455 ectoine utilization protein EutA K01799 nicE; maleate isomerase [EC:5.2.1.1]
D PAE61_12055 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAE61_12035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAE61_12065 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAE61_12060 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PAE61_10240 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PAE61_15660 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAE61_14640 gabD; NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAE61_03415 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAE61_07900 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PAE61_12740 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PAE61_12745 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PAE61_06090 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D PAE61_10655 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_14600 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_02945 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_02940 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:paez00660]
D PAE61_10655 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_14600 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_02945 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_02940 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PAE61_14120 CaiB/BaiF CoA-transferase family protein K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D PAE61_06490 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAE61_06485 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAE61_02015 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PAE61_02025 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PAE61_02075 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:paez00562]
D PAE61_16290 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PAE61_17395 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PAE61_08870 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D PAE61_15020 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D PAE61_14980 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D PAE61_14985 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D PAE61_14975 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D PAE61_14990 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D PAE61_00850 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D PAE61_13550 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PAE61_09015 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:paez00190]
D PAE61_12610 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PAE61_00695 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PAE61_12605 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PAE61_12600 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PAE61_12590 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PAE61_12580 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PAE61_12565 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PAE61_12550 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PAE61_12540 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PAE61_00685 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PAE61_12530 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PAE61_12520 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PAE61_00680 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PAE61_12515 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PAE61_12510 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PAE61_00670 proton-conducting transporter membrane subunit K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PAE61_12505 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PAE61_00665 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PAE61_12500 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PAE61_00660 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PAE61_00675 nuoK; NADH-quinone oxidoreductase subunit NuoK K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D PAE61_12055 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAE61_12035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAE61_12065 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAE61_12060 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PAE61_03600 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PAE61_03605 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PAE61_12710 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PAE61_16955 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D PAE61_12695 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PAE61_02990 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PAE61_12715 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D PAE61_12700 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PAE61_10710 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAE61_07120 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PAE61_07125 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PAE61_07130 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PAE61_07135 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PAE61_16960 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D PAE61_16965 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D PAE61_16970 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D PAE61_07295 cytochrome c family protein K08738 CYC; cytochrome c
D PAE61_02995 cytochrome C K08738 CYC; cytochrome c
D PAE61_09620 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PAE61_09610 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PAE61_09615 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PAE61_09625 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PAE61_09605 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PAE61_12015 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PAE61_12000 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PAE61_12005 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PAE61_12010 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PAE61_12130 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D PAE61_12160 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PAE61_12750 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PAE61_13410 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:paez00710]
D PAE61_08095 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PAE61_13510 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAE61_00635 type II glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D PAE61_06520 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAE61_08680 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PAE61_10750 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PAE61_07360 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PAE61_09015 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PAE61_13005 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PAE61_11400 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PAE61_13710 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PAE61_06200 PEP-utilizing enzyme K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PAE61_07780 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PAE61_03180 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PAE61_12085 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:paez00720]
D PAE61_06200 PEP-utilizing enzyme K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PAE61_07655 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PAE61_12085 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAE61_14135 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PAE61_13460 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PAE61_12055 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PAE61_12035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PAE61_12065 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PAE61_12060 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PAE61_06485 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PAE61_06490 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04040 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PAE61_12380 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PAE61_13305 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PAE61_01980 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PAE61_01975 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PAE61_11520 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PAE61_14115 MaoC family dehydratase N-terminal domain-containing protein K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D PAE61_17450 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PAE61_17385 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PAE61_00735 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PAE61_16845 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAE61_00730 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAE61_09510 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_09880 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:paez00680]
D PAE61_02325 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PAE61_02315 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D PAE61_08335 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PAE61_08340 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PAE61_08345 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D PAE61_09240 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAE61_07105 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAE61_09525 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PAE61_07760 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PAE61_06960 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAE61_12085 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAE61_06520 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PAE61_08680 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PAE61_03140 hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PAE61_16845 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAE61_00730 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAE61_00735 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PAE61_09510 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_09880 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_03675 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PAE61_01930 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAE61_05005 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAE61_01935 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PAE61_15480 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:paez00910]
D PAE61_04345 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PAE61_04365 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D PAE61_04350 nirB; nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D PAE61_04355 nirD; nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D PAE61_10395 c-type cytochrome K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D PAE61_10370 cbb3-type cytochrome c oxidase subunit I K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D PAE61_10375 cytochrome c K02305 norC; nitric oxide reductase subunit C
D PAE61_15495 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PAE61_15735 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PAE61_03620 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PAE61_13465 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PAE61_01435 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03430 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_13905 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PAE61_13915 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PAE61_13175 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:paez00920]
D PAE61_10035 cysP; thiosulfate ABC transporter substrate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PAE61_10040 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PAE61_10045 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PAE61_10050 ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PAE61_03270 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PAE61_16825 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PAE61_00055 PepSY domain-containing protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D PAE61_15720 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D PAE61_00200 molybdopterin-dependent oxidoreductase K08357 ttrA; tetrathionate reductase subunit A
D PAE61_00190 4Fe-4S dicluster domain-containing protein K08358 ttrB; tetrathionate reductase subunit B
D PAE61_00195 nrfD; polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C
D PAE61_10650 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAE61_08020 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PAE61_09115 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PAE61_04940 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PAE61_13405 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PAE61_12400 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D PAE61_16580 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D PAE61_17025 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PAE61_06665 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:paez00061]
D PAE61_13305 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PAE61_01980 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PAE61_01975 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PAE61_11520 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PAE61_08425 acyl carrier protein K02078 acpP; acyl carrier protein
D PAE61_11090 acyl carrier protein K02078 acpP; acyl carrier protein
D PAE61_11105 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PAE61_09040 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PAE61_06150 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PAE61_07915 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PAE61_10270 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_11095 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_16340 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_06160 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PAE61_08465 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PAE61_11760 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PAE61_00725 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PAE61_06145 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PAE61_01835 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:paez00071]
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06650 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PAE61_04435 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PAE61_10215 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PAE61_14125 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PAE61_04015 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAE61_04395 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAE61_01835 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAE61_11015 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D PAE61_13095 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D PAE61_14595 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D PAE61_02385 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D PAE61_02325 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PAE61_07910 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:paez00121]
D PAE61_10605 SDR family oxidoreductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:paez00561]
D PAE61_07760 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10720 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PAE61_09035 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PAE61_02525 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PAE61_13235 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAE61_10555 NAD-dependent epimerase/dehydratase family protein K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:paez00564]
D PAE61_03500 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PAE61_07775 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PAE61_02525 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PAE61_13235 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PAE61_09455 CBASS cGAMP-activated phospholipase K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
D PAE61_03330 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D PAE61_09750 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PAE61_11430 CDP-alcohol phosphatidyltransferase family protein K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D PAE61_02475 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PAE61_07350 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D PAE61_11515 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PAE61_04725 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PAE61_01240 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
D PAE61_09455 CBASS cGAMP-activated phospholipase K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:paez00230]
D PAE61_03195 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PAE61_10545 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAE61_12090 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PAE61_00580 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PAE61_02840 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PAE61_07170 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PAE61_10575 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PAE61_09005 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PAE61_03940 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D PAE61_04095 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAE61_10580 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PAE61_03305 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PAE61_03300 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PAE61_03945 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PAE61_13480 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PAE61_17470 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PAE61_12630 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PAE61_11065 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PAE61_06580 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PAE61_03590 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PAE61_03250 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PAE61_13390 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAE61_11110 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAE61_16125 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PAE61_11770 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PAE61_09555 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D PAE61_09560 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D PAE61_06270 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAE61_09575 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D PAE61_07010 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PAE61_15530 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAE61_15535 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PAE61_07635 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PAE61_15955 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D PAE61_11185 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PAE61_10995 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PAE61_12155 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PAE61_08270 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PAE61_03200 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D PAE61_01275 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D PAE61_08035 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D PAE61_07280 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PAE61_03815 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PAE61_05865 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAE61_12470 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PAE61_08170 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PAE61_03270 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PAE61_02055 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D PAE61_02060 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D PAE61_01295 bifunctional allantoicase/(S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D PAE61_02065 ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D PAE61_05000 fumarylacetoacetate hydrolase family protein K16856 ugl; ureidoglycolate lyase [EC:4.3.2.3]
C 00240 Pyrimidine metabolism [PATH:paez00240]
D PAE61_14055 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAE61_02295 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAE61_02965 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PAE61_02510 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PAE61_13500 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PAE61_02520 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PAE61_11075 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PAE61_13495 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PAE61_14780 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PAE61_10980 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PAE61_11110 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAE61_12470 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PAE61_01625 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PAE61_13295 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PAE61_10445 d(CMP) kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PAE61_11065 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PAE61_06580 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PAE61_03205 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PAE61_07280 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PAE61_03815 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PAE61_08920 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D PAE61_03185 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PAE61_07515 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PAE61_15530 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAE61_15535 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PAE61_15955 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D PAE61_03050 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PAE61_06180 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PAE61_00585 thymidine phosphorylase family protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D PAE61_03190 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D PAE61_03070 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PAE61_06130 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:paez00250]
D PAE61_06110 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAE61_09525 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PAE61_02645 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PAE61_16635 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PAE61_02615 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PAE61_08270 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PAE61_13480 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PAE61_02510 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PAE61_10240 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PAE61_15660 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAE61_14640 gabD; NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAE61_03415 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAE61_13905 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PAE61_13915 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PAE61_03620 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PAE61_13465 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PAE61_16370 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PAE61_01435 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03430 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_14055 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAE61_02295 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAE61_02965 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PAE61_04095 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAE61_14230 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAE61_03475 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAE61_02840 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:paez00260]
D PAE61_14300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAE61_06525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAE61_15425 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAE61_17280 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAE61_11915 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAE61_12685 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAE61_04920 pyridoxal-phosphate dependent enzyme K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAE61_12105 beta-eliminating lyase-related protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PAE61_09240 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAE61_07105 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAE61_09525 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PAE61_11225 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PAE61_07760 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PAE61_03675 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PAE61_01930 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAE61_05005 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAE61_01935 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PAE61_15480 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PAE61_10850 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D PAE61_13870 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PAE61_13880 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAE61_11465 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_13875 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PAE61_07710 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D PAE61_02335 hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D PAE61_08560 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PAE61_09530 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PAE61_16460 eutB; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PAE61_16645 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PAE61_10685 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PAE61_10090 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PAE61_14310 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PAE61_14315 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D PAE61_14305 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D PAE61_16470 doeA; ectoine hydrolase DoeA K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
D PAE61_16475 doeB; N(2)-acetyl-L-2,4-diaminobutanoate deacetylase DoeB K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125]
D PAE61_16415 aspartate aminotransferase family protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76]
D PAE61_16420 NAD-dependent succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-]
C 00270 Cysteine and methionine metabolism [PATH:paez00270]
D PAE61_08020 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PAE61_09115 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PAE61_04940 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PAE61_02460 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PAE61_13245 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PAE61_08540 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PAE61_16150 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PAE61_13285 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PAE61_03250 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PAE61_10645 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PAE61_10125 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PAE61_16155 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PAE61_14300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAE61_06525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAE61_15425 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAE61_17280 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAE61_11915 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAE61_13405 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PAE61_11970 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PAE61_12400 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D PAE61_13100 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAE61_02495 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PAE61_04145 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PAE61_06110 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAE61_10650 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAE61_12085 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PAE61_08560 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PAE61_01930 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAE61_05005 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAE61_01935 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:paez00280]
D PAE61_13100 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAE61_11465 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_10215 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PAE61_14125 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PAE61_07855 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D PAE61_06650 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PAE61_11895 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D PAE61_11865 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PAE61_08885 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PAE61_13565 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PAE61_13550 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_08605 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PAE61_07890 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D PAE61_07875 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D PAE61_07905 crotonase/enoyl-CoA hydratase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D PAE61_07900 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PAE61_12740 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PAE61_12745 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:paez00290]
D PAE61_09530 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PAE61_16460 eutB; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PAE61_16645 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PAE61_02015 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PAE61_02025 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PAE61_02075 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PAE61_10655 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_14600 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_02945 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_02940 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PAE61_03900 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PAE61_07000 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PAE61_13100 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAE61_08690 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PAE61_11195 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:paez00300]
D PAE61_11915 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PAE61_14300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAE61_06525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAE61_15425 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAE61_17280 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAE61_09505 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAE61_15350 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAE61_13135 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PAE61_03700 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PAE61_17000 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PAE61_07565 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PAE61_02665 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PAE61_13820 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PAE61_02630 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PAE61_16360 saccharopine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D PAE61_12345 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PAE61_12340 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:paez00310]
D PAE61_16360 saccharopine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D PAE61_06465 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PAE61_11465 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_04015 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAE61_04395 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAE61_06650 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_14640 gabD; NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAE61_03415 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAE61_16890 lhgO; L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D PAE61_00935 lhgO; L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D PAE61_15305 CaiB/BaiF CoA-transferase family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D PAE61_11630 lysine-2,3-aminomutase-like protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D PAE61_03760 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PAE61_15590 Ldh family oxidoreductase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:paez00220]
D PAE61_17005 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PAE61_16635 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PAE61_02615 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PAE61_13265 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D PAE61_16935 biotin-dependent carboxyltransferase family protein K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D PAE61_04095 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAE61_01435 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03430 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_14055 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAE61_02295 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PAE61_02965 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PAE61_03620 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PAE61_13465 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PAE61_06110 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAE61_01880 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PAE61_05630 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PAE61_03670 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PAE61_17000 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:paez00330]
D PAE61_01500 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PAE61_17375 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PAE61_11610 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_03470 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PAE61_14605 aldehyde dehydrogenase family protein K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D PAE61_13265 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D PAE61_08610 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PAE61_13770 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PAE61_16370 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PAE61_06980 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PAE61_08090 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PAE61_15640 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PAE61_06110 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAE61_03760 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PAE61_15555 aconitase X K09123 lhpI; cis-L-3-hydroxyproline dehydratase [EC:4.2.1.171]
C 00340 Histidine metabolism [PATH:paez00340]
D PAE61_11285 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PAE61_11280 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D PAE61_01985 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D PAE61_10925 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D PAE61_02805 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PAE61_02815 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PAE61_01990 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PAE61_02820 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PAE61_11975 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_13215 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_06355 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PAE61_08525 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PAE61_08530 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D PAE61_08520 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D PAE61_08535 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:paez00350]
D PAE61_06110 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAE61_11975 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_13215 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_10645 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PAE61_15510 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PAE61_09105 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PAE61_01680 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PAE61_15605 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PAE61_02325 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PAE61_07910 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PAE61_14650 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D PAE61_14655 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D PAE61_14630 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D PAE61_14625 HpcH/HpaI aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D PAE61_14640 gabD; NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAE61_03415 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAE61_01660 cupin domain-containing protein K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
D PAE61_01665 maleylpyruvate isomerase N-terminal domain-containing protein K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
D PAE61_01675 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
D PAE61_06535 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:paez00360]
D PAE61_08960 enoyl-CoA hydratase-related protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D PAE61_10160 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D PAE61_13675 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PAE61_06265 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PAE61_06110 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAE61_11975 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_13215 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_10645 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PAE61_15510 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PAE61_03760 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PAE61_16905 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D PAE61_14595 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D PAE61_02385 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:paez00380]
D PAE61_06465 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PAE61_11465 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_04015 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAE61_04395 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAE61_06650 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_16905 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:paez00400]
D PAE61_06310 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PAE61_09690 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PAE61_06245 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PAE61_15810 TIM barrel protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D PAE61_16075 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PAE61_05750 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8]
D PAE61_09695 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PAE61_01950 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PAE61_03660 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PAE61_11785 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PAE61_11800 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PAE61_11805 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PAE61_10425 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PAE61_11825 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PAE61_10685 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PAE61_10090 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PAE61_07220 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D PAE61_11980 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D PAE61_07290 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PAE61_06110 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAE61_11975 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_13215 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_10645 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:paez00410]
D PAE61_10240 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PAE61_15660 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_08605 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PAE61_06650 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PAE61_13550 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:paez00430]
D PAE61_10240 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PAE61_05975 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PAE61_02645 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PAE61_00735 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PAE61_16845 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PAE61_00730 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:paez00440]
D PAE61_02745 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D PAE61_02735 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D PAE61_02740 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D PAE61_02765 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D PAE61_13800 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D PAE61_02775 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D PAE61_02755 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D PAE61_03035 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:paez00450]
D PAE61_02460 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PAE61_13245 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PAE61_08540 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PAE61_04195 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PAE61_03260 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PAE61_03270 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PAE61_06195 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PAE61_08355 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PAE61_13255 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:paez00460]
D PAE61_05975 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PAE61_09240 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAE61_07105 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:paez00470]
D PAE61_11860 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PAE61_03760 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PAE61_13605 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAE61_04095 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PAE61_08985 aspartate/glutamate racemase family protein K01776 murI; glutamate racemase [EC:5.1.1.3]
D PAE61_12330 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PAE61_13820 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PAE61_02630 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PAE61_15560 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D PAE61_15545 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
C 00480 Glutathione metabolism [PATH:paez00480]
D PAE61_05975 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PAE61_09795 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D PAE61_06005 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D PAE61_16940 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PAE61_02495 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PAE61_04145 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PAE61_13165 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PAE61_01555 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PAE61_08830 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PAE61_07895 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_11155 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_17175 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_01260 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_03665 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_06660 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_07365 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PAE61_00345 NAD(P)/FAD-dependent oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PAE61_04040 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PAE61_16945 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PAE61_06400 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PAE61_15410 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D PAE61_17375 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:paez00540]
D PAE61_08470 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PAE61_13585 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PAE61_08420 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PAE61_08475 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PAE61_08480 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PAE61_15310 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PAE61_15255 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PAE61_11250 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PAE61_16820 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PAE61_15315 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PAE61_06545 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PAE61_10760 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:paez00541]
D PAE61_16810 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PAE61_16805 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PAE61_15240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PAE61_14060 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PAE61_12995 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAE61_12985 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PAE61_12980 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PAE61_12990 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PAE61_09995 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PAE61_10000 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D PAE61_10005 DegT/DnrJ/EryC1/StrS family aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D PAE61_07810 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PAE61_07815 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PAE61_03480 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:paez00550]
D PAE61_06340 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PAE61_13620 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PAE61_13630 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PAE61_12330 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PAE61_12345 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PAE61_13605 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAE61_12340 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PAE61_09755 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PAE61_13920 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PAE61_12335 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PAE61_13635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PAE61_16350 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PAE61_07045 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PAE61_11215 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PAE61_12350 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PAE61_03055 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PAE61_09905 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:paez00552]
D PAE61_13920 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:paez00543]
D PAE61_08020 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PAE61_15135 polysaccharide pyruvyl transferase family protein K13665 gumL; pyruvyltransferase
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:paez00730]
D PAE61_04045 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PAE61_04160 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAE61_04050 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PAE61_17520 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PAE61_04060 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PAE61_04065 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PAE61_06325 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PAE61_01340 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PAE61_08280 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D PAE61_05865 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAE61_04080 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:paez00740]
D PAE61_17220 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PAE61_08710 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PAE61_06930 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PAE61_08715 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PAE61_01400 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PAE61_06950 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PAE61_12115 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:paez00750]
D PAE61_11755 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PAE61_08180 pdxY; pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PAE61_09220 pdxY; pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PAE61_02090 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D PAE61_01935 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PAE61_01530 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PAE61_17080 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D PAE61_12685 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PAE61_04920 pyridoxal-phosphate dependent enzyme K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:paez00760]
D PAE61_16685 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PAE61_03590 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PAE61_11065 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PAE61_06580 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PAE61_08955 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PAE61_12470 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PAE61_11725 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PAE61_10810 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PAE61_07345 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PAE61_16680 pncA; bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PAE61_08025 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PAE61_07110 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PAE61_08820 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PAE61_08815 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D PAE61_16455 ectoine utilization protein EutA K01799 nicE; maleate isomerase [EC:5.2.1.1]
D PAE61_14640 gabD; NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PAE61_03415 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:paez00770]
D PAE61_10655 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_14600 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_02945 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PAE61_02940 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PAE61_03900 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PAE61_07000 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PAE61_12490 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PAE61_04155 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PAE61_12470 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PAE61_13535 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PAE61_16070 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PAE61_17090 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PAE61_13100 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:paez00780]
D PAE61_06150 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PAE61_07915 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PAE61_10270 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_11095 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_16340 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_08465 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PAE61_11760 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PAE61_00725 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PAE61_06145 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PAE61_12495 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:paez00785]
D PAE61_03000 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PAE61_08860 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PAE61_11465 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_04950 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PAE61_07555 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PAE61_07550 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PAE61_07545 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PAE61_06470 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PAE61_06465 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PAE61_13870 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PAE61_13880 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAE61_13875 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:paez00790]
D PAE61_12405 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D PAE61_01340 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PAE61_03765 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PAE61_06210 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PAE61_11175 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PAE61_06215 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PAE61_06740 sul2; sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D PAE61_06135 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PAE61_11525 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PAE61_17220 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PAE61_08710 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PAE61_12950 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PAE61_12765 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PAE61_11830 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PAE61_02485 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PAE61_16625 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PAE61_11835 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PAE61_09025 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:paez00670]
D PAE61_06135 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PAE61_17450 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PAE61_09240 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAE61_07105 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PAE61_10575 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PAE61_17470 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PAE61_02445 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PAE61_13880 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PAE61_13245 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PAE61_06130 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PAE61_07390 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PAE61_17385 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:paez00860]
D PAE61_10850 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D PAE61_09585 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAE61_03130 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAE61_09665 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PAE61_06890 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PAE61_03515 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PAE61_06885 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PAE61_06695 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D PAE61_10840 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PAE61_16080 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D PAE61_12945 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PAE61_15595 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PAE61_12710 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PAE61_10710 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAE61_13735 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D PAE61_13725 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D PAE61_13650 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PAE61_08110 biliverdin-producing heme oxygenase K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D PAE61_09885 pyridoxamine 5-phosphate oxidase K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D PAE61_07665 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:paez00130]
D PAE61_10630 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PAE61_15645 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D PAE61_17255 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PAE61_03955 UbiH/UbiF family hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PAE61_17540 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PAE61_03890 NAD(P)H-binding protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PAE61_15510 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:paez00900]
D PAE61_17520 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PAE61_09745 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PAE61_07355 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D PAE61_17075 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PAE61_07025 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PAE61_11160 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_17515 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PAE61_02570 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PAE61_09755 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:paez00907]
D PAE61_06650 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PAE61_07900 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PAE61_10750 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:paez00523]
D PAE61_12995 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAE61_12985 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PAE61_12980 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PAE61_12990 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:paez01053]
D PAE61_10870 AMP-binding protein K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D PAE61_10860 amino acid adenylation domain-containing protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D PAE61_17445 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D PAE61_12985 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:paez00946]
D PAE61_14490 fumarylacetoacetate hydrolase family protein K26185 fdeI; naringenin degradation protein FdeI
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism [PATH:paez00232]
D PAE61_02340 Rieske 2Fe-2S domain-containing protein K21723 ndmB; methylxanthine N3-demethylase [EC:1.14.13.179]
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D PAE61_08890 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:paez00332]
D PAE61_06980 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PAE61_08090 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:paez00261]
D PAE61_03270 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PAE61_14300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAE61_06525 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PAE61_15425 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAE61_17280 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PAE61_09505 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAE61_15350 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PAE61_13135 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:paez00521]
D PAE61_16160 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PAE61_10545 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PAE61_16290 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PAE61_17395 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PAE61_08870 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D PAE61_15020 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D PAE61_12995 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAE61_12985 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PAE61_12980 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PAE61_12990 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PAE61_16160 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:paez00525]
D PAE61_12995 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PAE61_12985 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:paez00401]
D PAE61_11980 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D PAE61_06110 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAE61_11975 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_13215 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_10645 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PAE61_11785 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PAE61_11800 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PAE61_11105 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PAE61_10270 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_11095 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_16340 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_11760 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PAE61_00725 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PAE61_06145 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PAE61_08425 acyl carrier protein K02078 acpP; acyl carrier protein
D PAE61_11090 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:paez00999]
D PAE61_16150 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PAE61_16075 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:paez00362]
D PAE61_01715 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D PAE61_14375 dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D PAE61_01730 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D PAE61_01725 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D PAE61_01740 lyase family protein K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D PAE61_08805 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PAE61_12525 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PAE61_01720 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PAE61_05300 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PAE61_14595 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D PAE61_02385 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D PAE61_07385 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D PAE61_14610 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D PAE61_01710 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D PAE61_01700 3-hydroxybenzoate 6-monooxygenase K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24]
D PAE61_06650 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PAE61_04435 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PAE61_04015 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAE61_04395 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PAE61_13675 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PAE61_06265 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:paez00625]
D PAE61_07910 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PAE61_02325 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PAE61_07615 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_10275 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_01815 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PAE61_02750 HAD family phosphatase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:paez00361]
D PAE61_14375 dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D PAE61_02750 HAD family phosphatase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:paez00633]
D PAE61_14240 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:paez00643]
D PAE61_09105 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PAE61_01680 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PAE61_15605 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
C 00791 Atrazine degradation
D PAE61_16935 biotin-dependent carboxyltransferase family protein K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
C 00930 Caprolactam degradation [PATH:paez00930]
D PAE61_11015 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D PAE61_13095 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D PAE61_06650 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:paez00626]
D PAE61_07910 NADP-dependent oxidoreductase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PAE61_02325 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D PAE61_01730 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D PAE61_01725 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:paez03020]
D PAE61_12235 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PAE61_12225 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PAE61_05880 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PAE61_11180 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:paez03010]
D PAE61_10440 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PAE61_10455 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PAE61_06860 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PAE61_11310 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PAE61_05845 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PAE61_01485 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PAE61_06805 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PAE61_05830 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PAE61_15210 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PAE61_06825 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PAE61_05875 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PAE61_06800 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PAE61_05870 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PAE61_05825 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PAE61_02800 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PAE61_07215 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PAE61_05805 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PAE61_01480 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PAE61_06850 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PAE61_17555 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PAE61_03385 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PAE61_12250 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PAE61_06845 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PAE61_06830 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PAE61_06835 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PAE61_05820 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PAE61_05835 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PAE61_12240 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PAE61_01475 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PAE61_12245 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PAE61_12255 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PAE61_15215 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PAE61_05810 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PAE61_05855 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PAE61_06865 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PAE61_05885 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PAE61_05840 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PAE61_07195 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PAE61_11590 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PAE61_10745 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PAE61_06840 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PAE61_05815 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PAE61_11950 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PAE61_10740 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PAE61_12870 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PAE61_05800 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PAE61_05850 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PAE61_07190 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PAE61_09030 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PAE61_10785 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PAE61_05670 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PAE61_11585 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PAE61_14855 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:paez00970]
D PAE61_02390 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAE61_04200 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAE61_06510 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PAE61_10695 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAE61_12180 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAE61_03005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAE61_03115 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAE61_02085 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAE61_12275 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PAE61_09585 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAE61_03130 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAE61_11045 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PAE61_17260 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PAE61_10880 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PAE61_11050 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PAE61_08260 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAE61_02885 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAE61_08245 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PAE61_08255 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PAE61_08385 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAE61_12890 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAE61_08355 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PAE61_08685 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAE61_13255 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAE61_02445 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PAE61_13120 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAE61_17195 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAE61_01325 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAE61_09895 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PAE61_07485 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAE61_11290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAE61_11275 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAE61_13205 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAE61_13190 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAE61_06500 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAE61_15235 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:paez03060]
D PAE61_05860 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAE61_12265 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PAE61_13300 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAE61_12460 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PAE61_12455 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PAE61_12465 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PAE61_05645 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAE61_01890 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAE61_15950 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PAE61_07240 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PAE61_07275 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D PAE61_11020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PAE61_01575 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D PAE61_01580 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PAE61_01585 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D PAE61_17130 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PAE61_17475 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PAE61_00285 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:paez04122]
D PAE61_04160 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAE61_10650 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PAE61_16980 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PAE61_08485 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PAE61_02485 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PAE61_12765 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PAE61_02480 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D PAE61_11830 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PAE61_16625 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PAE61_04055 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:paez03018]
D PAE61_03690 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PAE61_04110 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D PAE61_06960 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAE61_01790 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PAE61_03080 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PAE61_02675 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PAE61_15415 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PAE61_16085 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PAE61_12485 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PAE61_16835 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAE61_12145 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAE61_03550 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D PAE61_12160 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PAE61_12750 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PAE61_13410 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PAE61_16705 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:paez03030]
D PAE61_09850 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAE61_16065 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAE61_03875 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAE61_07265 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PAE61_03045 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAE61_17185 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAE61_01560 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PAE61_01230 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAE61_13490 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PAE61_06900 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PAE61_09360 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_09680 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_11150 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PAE61_12190 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PAE61_13085 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PAE61_09805 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAE61_08500 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:paez03410]
D PAE61_11990 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PAE61_11810 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PAE61_15290 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PAE61_17545 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PAE61_03980 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PAE61_02605 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PAE61_02505 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PAE61_07650 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PAE61_17235 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PAE61_09805 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAE61_08675 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PAE61_08500 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:paez03420]
D PAE61_09655 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PAE61_11455 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PAE61_05990 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D PAE61_13325 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PAE61_12415 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAE61_05115 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAE61_09805 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAE61_08500 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:paez03430]
D PAE61_03800 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PAE61_17500 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D PAE61_12415 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAE61_05115 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAE61_07160 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PAE61_17510 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PAE61_08675 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PAE61_09360 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_09680 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_03875 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAE61_01230 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAE61_07265 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PAE61_17185 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAE61_03045 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAE61_09850 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAE61_16065 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAE61_01560 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PAE61_08500 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PAE61_14730 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:paez03440]
D PAE61_08675 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PAE61_09360 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_09680 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_01235 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PAE61_03370 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PAE61_07250 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D PAE61_06065 recA; recombinase RecA K03553 recA; recombination protein RecA
D PAE61_09805 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAE61_15390 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PAE61_15400 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PAE61_15385 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PAE61_08505 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PAE61_03875 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAE61_01230 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAE61_07265 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PAE61_17185 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAE61_03045 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAE61_09850 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAE61_16065 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAE61_01560 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PAE61_11395 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:paez02010]
D PAE61_10035 cysP; thiosulfate ABC transporter substrate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PAE61_10040 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PAE61_10045 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PAE61_10050 ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PAE61_04075 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D PAE61_04090 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D PAE61_04085 ATP-binding cassette domain-containing protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D PAE61_08325 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PAE61_08320 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D PAE61_08315 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PAE61_08135 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PAE61_10025 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PAE61_08140 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PAE61_10030 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PAE61_08130 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PAE61_10020 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PAE61_03655 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D PAE61_03650 thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein
D PAE61_03645 ATP-binding cassette domain-containing protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PAE61_13425 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PAE61_11930 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D PAE61_11935 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D PAE61_11925 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PAE61_14090 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PAE61_03865 choX; choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PAE61_14085 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D PAE61_03860 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D PAE61_14080 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PAE61_03855 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PAE61_08600 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAE61_08625 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAE61_14185 ATP-binding cassette domain-containing protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAE61_07730 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAE61_16585 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAE61_14205 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PAE61_01345 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PAE61_14200 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PAE61_14195 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PAE61_08585 ABC transporter substrate-binding protein K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D PAE61_08590 sugar ABC transporter permease K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D PAE61_08595 carbohydrate ABC transporter permease K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D PAE61_08640 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PAE61_08635 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D PAE61_08630 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D PAE61_14285 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PAE61_14295 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PAE61_14290 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PAE61_03565 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D PAE61_03580 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D PAE61_03585 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D PAE61_03570 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PAE61_07715 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PAE61_07720 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D PAE61_07725 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D PAE61_14275 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D PAE61_14270 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D PAE61_14265 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PAE61_13745 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PAE61_13750 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PAE61_13755 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PAE61_13760 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PAE61_15910 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D PAE61_15905 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D PAE61_15900 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D PAE61_15895 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PAE61_02715 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D PAE61_02720 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D PAE61_02725 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D PAE61_05930 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PAE61_05935 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D PAE61_05940 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D PAE61_05945 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PAE61_09955 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D PAE61_09960 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D PAE61_09965 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D PAE61_15585 transporter substrate-binding domain-containing protein K23061 lhpP; hydroxyproline transporter system substrate-binding protein
D PAE61_15580 amino acid ABC transporter permease K23062 lhpM; hydroxyproline transport system permease protein
D PAE61_15575 amino acid ABC transporter permease K23063 lhpN; hydroxyproline transport system permease protein
D PAE61_15570 amino acid ABC transporter ATP-binding protein K23064 lhpO; hydroxyproline transport system ATP-binding protein [EC:7.4.2.1]
D PAE61_10300 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_15040 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_17305 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_01855 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_06305 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_10295 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_15070 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_17300 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_01845 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_06285 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_10290 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_15075 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_17295 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_01850 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_06280 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_10285 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_15060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_17290 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_01840 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_06300 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_10280 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_15065 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_17285 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_01860 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_06295 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_17145 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PAE61_17140 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D PAE61_17135 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D PAE61_07080 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PAE61_07075 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D PAE61_07070 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D PAE61_07065 ATP-binding cassette domain-containing protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PAE61_07060 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAE61_08210 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PAE61_08215 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D PAE61_08220 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D PAE61_08225 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D PAE61_08230 dipeptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D PAE61_07300 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PAE61_07305 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D PAE61_07310 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D PAE61_07315 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D PAE61_07795 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PAE61_07800 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D PAE61_07805 ATP-binding cassette domain-containing protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D PAE61_11375 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D PAE61_11360 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D PAE61_11365 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PAE61_17315 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D PAE61_17325 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein
D PAE61_17330 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D PAE61_17320 manganese/iron ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D PAE61_09595 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D PAE61_11245 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PAE61_12810 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PAE61_12820 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PAE61_16400 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PAE61_12825 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D PAE61_16410 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D PAE61_11240 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PAE61_12815 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PAE61_16405 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PAE61_02855 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D PAE61_02860 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PAE61_12430 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D PAE61_12435 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D PAE61_12440 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D PAE61_12445 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PAE61_01550 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D PAE61_01545 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D PAE61_15270 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PAE61_13230 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PAE61_13225 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D PAE61_06595 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PAE61_12280 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PAE61_02540 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PAE61_03090 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PAE61_13860 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:paez02060]
D PAE61_13690 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D PAE61_13695 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PAE61_06530 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PAE61_15280 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:paez03070]
D PAE61_06560 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PAE61_12460 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PAE61_12455 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PAE61_12265 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PAE61_13300 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAE61_05860 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAE61_12465 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PAE61_05645 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAE61_01890 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAE61_11020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PAE61_15950 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PAE61_07240 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PAE61_01575 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D PAE61_01580 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PAE61_01585 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D PAE61_00430 conjugal transfer protein TraF K03200 virB5; type IV secretion system protein VirB5
D PAE61_00420 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9
D PAE61_00395 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D PAE61_00425 type IV secretion system protein K03203 virB8; type IV secretion system protein VirB8
D PAE61_00415 TrbI/VirB10 family protein K03195 virB10; type IV secretion system protein VirB10
D PAE61_00410 ATPase, T2SS/T4P/T4SS family K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D PAE61_09210 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PAE61_00250 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PAE61_01060 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PAE61_04815 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PAE61_05320 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:paez02020]
D PAE61_07020 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PAE61_15885 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PAE61_01340 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PAE61_03765 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PAE61_15910 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D PAE61_06795 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PAE61_13110 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PAE61_07380 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D PAE61_02275 flagellin K02406 fliC; flagellin
D PAE61_16755 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PAE61_07690 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_14925 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_15805 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_01380 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_04935 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_04990 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_07685 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D PAE61_14930 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D PAE61_01385 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D PAE61_14935 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D PAE61_01390 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D PAE61_15795 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D PAE61_10710 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAE61_01225 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PAE61_11690 FepA family TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D PAE61_14110 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D PAE61_05890 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D PAE61_04125 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D PAE61_01440 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D PAE61_11330 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PAE61_11325 response regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PAE61_01435 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03430 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_11320 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PAE61_11315 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D PAE61_13715 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04100 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PAE61_10480 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PAE61_03810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAE61_10475 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PAE61_10470 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PAE61_10465 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAE61_10485 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAE61_08700 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PAE61_08935 diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D PAE61_06055 ATP-binding protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D PAE61_08085 histidine phosphotransferase family protein K13588 chpT; histidine phosphotransferase ChpT
D PAE61_08495 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D PAE61_14140 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D PAE61_14820 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D PAE61_14815 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PAE61_16445 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PAE61_00200 molybdopterin-dependent oxidoreductase K08357 ttrA; tetrathionate reductase subunit A
D PAE61_00190 4Fe-4S dicluster domain-containing protein K08358 ttrB; tetrathionate reductase subunit B
D PAE61_00195 nrfD; polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C
D PAE61_15975 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PAE61_15965 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D PAE61_03600 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PAE61_03605 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PAE61_07295 cytochrome c family protein K08738 CYC; cytochrome c
D PAE61_02995 cytochrome C K08738 CYC; cytochrome c
D PAE61_07120 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PAE61_07125 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PAE61_07130 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PAE61_07135 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PAE61_06560 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PAE61_06940 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:paez04148]
D PAE61_13265 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D PAE61_17375 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PAE61_03600 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:paez02024]
D PAE61_03550 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D PAE61_11785 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PAE61_11800 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PAE61_06310 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PAE61_05890 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D PAE61_10240 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PAE61_04890 GNAT family N-acetyltransferase K18096 bjaI; acyl-homoserine lactone synthase [EC:2.3.1.228 2.3.1.229 2.3.1.-]
D PAE61_04895 autoinducer binding domain-containing protein K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D PAE61_09200 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D PAE61_04825 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D PAE61_05330 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D PAE61_09195 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D PAE61_04830 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D PAE61_05335 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D PAE61_09190 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D PAE61_04835 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D PAE61_05340 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D PAE61_09185 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D PAE61_04840 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D PAE61_05345 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D PAE61_09180 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D PAE61_04845 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D PAE61_05350 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D PAE61_09170 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D PAE61_04855 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D PAE61_05360 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D PAE61_09165 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D PAE61_04860 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D PAE61_05365 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D PAE61_09160 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D PAE61_04865 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D PAE61_05370 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D PAE61_09155 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D PAE61_04870 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI
D PAE61_05375 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D PAE61_08150 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PAE61_03015 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PAE61_08155 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PAE61_08160 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PAE61_03025 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PAE61_03020 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PAE61_08165 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PAE61_03010 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PAE61_10300 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_15040 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_17305 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_01855 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_06305 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_10295 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_15070 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_17300 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_01845 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_06285 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_10290 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_15075 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_17295 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_01850 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_06280 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_10285 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_15060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_17290 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_01840 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_06300 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_10280 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_15065 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_17285 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_01860 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_06295 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_01835 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAE61_11370 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PAE61_17220 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PAE61_06930 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PAE61_07080 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PAE61_07075 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D PAE61_07070 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D PAE61_07065 ATP-binding cassette domain-containing protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PAE61_07060 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAE61_11435 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAE61_14340 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAE61_16520 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAE61_06085 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAE61_12665 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAE61_14345 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAE61_14470 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAE61_16515 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAE61_12660 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAE61_14350 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAE61_14475 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAE61_16510 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAE61_12655 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAE61_14355 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAE61_14480 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAE61_16505 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAE61_14360 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAE61_14485 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAE61_05645 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAE61_12265 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PAE61_13300 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAE61_05860 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAE61_12465 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PAE61_01890 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAE61_11020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PAE61_15950 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PAE61_07240 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:paez02030]
D PAE61_03810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAE61_14275 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D PAE61_08210 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PAE61_10470 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PAE61_10475 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PAE61_10465 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAE61_10485 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAE61_10460 STAS domain-containing protein K03409 cheX; chemotaxis protein CheX
D PAE61_08700 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PAE61_08705 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D PAE61_10480 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PAE61_13485 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PAE61_01615 FliM/FliN family flagellar motor C-terminal domain-containing protein K02416 fliM; flagellar motor switch protein FliM
D PAE61_16725 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PAE61_16755 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PAE61_09785 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D PAE61_16315 OmpA family protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:paez02040]
D PAE61_13045 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PAE61_16735 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D PAE61_13485 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PAE61_13060 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PAE61_13015 hypothetical protein K02415 fliL; flagellar protein FliL
D PAE61_16740 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D PAE61_01615 FliM/FliN family flagellar motor C-terminal domain-containing protein K02416 fliM; flagellar motor switch protein FliM
D PAE61_16725 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PAE61_16720 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PAE61_13040 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PAE61_16770 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PAE61_16765 FHIPEP family type III secretion protein K02400 flhA; flagellar biosynthesis protein FlhA
D PAE61_16775 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PAE61_13025 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PAE61_13055 FlgB family protein K02387 flgB; flagellar basal-body rod protein FlgB
D PAE61_13050 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PAE61_13855 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PAE61_16320 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D PAE61_13035 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D PAE61_13030 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PAE61_13020 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D PAE61_16335 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D PAE61_16325 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PAE61_16330 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D PAE61_02275 flagellin K02406 fliC; flagellin
D PAE61_16755 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PAE61_09785 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D PAE61_16315 OmpA family protein K02557 motB; chemotaxis protein MotB
D PAE61_06905 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PAE61_06960 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:paez04980]
D PAE61_13650 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PAE61_13245 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:paez01501]
D PAE61_17205 porin K08720 ompU; outer membrane protein OmpU
D PAE61_07495 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PAE61_07080 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PAE61_07075 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D PAE61_07070 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D PAE61_07065 ATP-binding cassette domain-containing protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PAE61_07060 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAE61_07770 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_15745 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_02005 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_07765 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_02000 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_15740 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_06560 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PAE61_07045 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PAE61_11215 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PAE61_12350 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:paez01502]
D PAE61_13605 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAE61_11860 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PAE61_12340 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PAE61_12335 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PAE61_13635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:paez01503]
D PAE61_07040 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PAE61_07380 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D PAE61_07770 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_15745 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_02005 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_07765 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_02000 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_15740 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_06560 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PAE61_08470 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:paez01000]
C 01001 Protein kinases [BR:paez01001]
D PAE61_11605 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PAE61_07020 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PAE61_06795 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PAE61_00025 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PAE61_11330 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PAE61_11320 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PAE61_04100 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PAE61_10470 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PAE61_06055 ATP-binding protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D PAE61_15975 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:paez01009]
D PAE61_16155 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PAE61_15480 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:paez01002]
D PAE61_17475 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PAE61_00285 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PAE61_06270 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PAE61_02840 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PAE61_13905 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PAE61_14230 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAE61_03475 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PAE61_08415 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D PAE61_08830 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PAE61_06190 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D PAE61_03325 M3 family oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D PAE61_17485 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PAE61_17490 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PAE61_13165 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PAE61_01555 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PAE61_08285 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PAE61_10915 M20 family metallopeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D PAE61_07565 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PAE61_02665 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PAE61_11485 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PAE61_04740 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PAE61_13720 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PAE61_10715 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D PAE61_17440 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PAE61_15395 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PAE61_09740 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PAE61_15440 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D PAE61_07380 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D PAE61_03055 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PAE61_09905 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PAE61_10065 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PAE61_16145 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PAE61_12220 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PAE61_11840 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PAE61_17130 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PAE61_15640 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PAE61_03685 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PAE61_08890 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D PAE61_13310 S49 family peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-]
D PAE61_15655 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D PAE61_07950 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D PAE61_15995 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PAE61_05975 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PAE61_16285 metallopeptidase TldD-related protein K03592 pmbA; PmbA protein
D PAE61_12720 tldD; metalloprotease TldD K03568 tldD; TldD protein
D PAE61_07370 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:paez01003]
D PAE61_10535 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D PAE61_16350 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PAE61_07045 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PAE61_11675 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:paez01005]
D PAE61_08470 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PAE61_08480 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PAE61_13585 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PAE61_08420 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PAE61_13965 phosphatase PAP2 family protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D PAE61_08475 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PAE61_15310 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PAE61_10760 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PAE61_15315 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PAE61_06545 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PAE61_11250 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PAE61_16820 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PAE61_15255 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PAE61_13180 glycosyltransferase family 4 protein K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
D PAE61_10015 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D PAE61_00320 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:paez01011]
D PAE61_06340 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PAE61_13620 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PAE61_13630 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PAE61_12330 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PAE61_12345 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PAE61_13605 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PAE61_11860 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PAE61_08985 aspartate/glutamate racemase family protein K01776 murI; glutamate racemase [EC:5.1.1.3]
D PAE61_12335 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PAE61_13635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PAE61_13920 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PAE61_04120 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D PAE61_07045 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PAE61_11215 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PAE61_12350 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PAE61_03055 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PAE61_09905 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PAE61_16350 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PAE61_08415 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D PAE61_15440 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D PAE61_15345 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PAE61_03355 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PAE61_07920 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PAE61_07040 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:paez01004]
D PAE61_11105 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PAE61_09040 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PAE61_06150 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PAE61_07915 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PAE61_10270 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_11095 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_16340 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PAE61_06160 fabA; bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PAE61_08465 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PAE61_11760 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PAE61_00725 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PAE61_06145 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PAE61_09510 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_09880 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PAE61_03175 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PAE61_01835 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAE61_15470 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D PAE61_09035 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PAE61_02525 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PAE61_13235 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:paez01008]
D PAE61_10870 AMP-binding protein K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D PAE61_10860 amino acid adenylation domain-containing protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C 01006 Prenyltransferases [BR:paez01006]
D PAE61_17515 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PAE61_02570 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PAE61_09755 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PAE61_10985 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PAE61_10630 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PAE61_12710 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:paez01007]
D PAE61_09895 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PAE61_09585 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAE61_03130 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAE61_10930 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PAE61_06500 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAE61_15235 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PAE61_08685 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAE61_07485 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAE61_13255 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAE61_01325 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAE61_13120 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAE61_17195 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAE61_02885 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAE61_11275 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAE61_08245 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PAE61_08255 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PAE61_12890 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAE61_11290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAE61_08385 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAE61_08260 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAE61_13205 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAE61_13190 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAE61_06110 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PAE61_10645 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PAE61_11975 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_13215 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PAE61_10850 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D PAE61_02460 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PAE61_08605 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D PAE61_17000 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PAE61_15660 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PAE61_14310 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PAE61_03760 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PAE61_13100 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PAE61_09525 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PAE61_01935 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:paez00194]
D PAE61_09605 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PAE61_09610 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PAE61_09615 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PAE61_09620 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PAE61_09625 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PAE61_12000 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PAE61_12005 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PAE61_12010 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PAE61_12015 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PAE61_12020 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:paez03000]
D PAE61_10125 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PAE61_12880 trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PAE61_06095 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PAE61_01705 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D PAE61_08545 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D PAE61_17390 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D PAE61_16900 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PAE61_03840 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D PAE61_10310 LysR substrate-binding domain-containing protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D PAE61_10320 LysR substrate-binding domain-containing protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D PAE61_07755 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PAE61_08645 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PAE61_15025 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PAE61_14250 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D PAE61_03750 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D PAE61_02730 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D PAE61_08515 UTRA domain-containing protein K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D PAE61_13080 GntR family transcriptional regulator K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D PAE61_14225 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D PAE61_08875 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D PAE61_10190 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PAE61_14825 FadR/GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PAE61_09235 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PAE61_05705 hypothetical protein K19060 mphR; TetR/AcrR family transcriptional regulator, macrolide resistance operon repressor
D PAE61_15750 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PAE61_04955 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PAE61_02650 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PAE61_16425 Lrp/AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D PAE61_15710 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PAE61_03905 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PAE61_04895 autoinducer binding domain-containing protein K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D PAE61_05890 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D PAE61_16220 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D PAE61_00380 helix-turn-helix domain-containing protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D PAE61_00550 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PAE61_17310 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PAE61_11370 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PAE61_09520 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D PAE61_10835 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PAE61_04030 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D PAE61_13430 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D PAE61_03535 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D PAE61_07850 helix-turn-helix domain-containing protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PAE61_06780 helix-turn-helix domain-containing protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PAE61_08910 helix-turn-helix domain-containing protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PAE61_00275 metalloregulator ArsR/SmtB family transcription factor K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D PAE61_13385 short-chain fatty acyl-CoA regulator family protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D PAE61_01595 short-chain fatty acyl-CoA regulator family protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D PAE61_04005 short-chain fatty acyl-CoA regulator family protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D PAE61_02400 mntR; manganese-binding transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D PAE61_12495 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PAE61_01870 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D PAE61_16370 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PAE61_10390 4Fe-4S binding protein K19343 nirI; NosR/NirI family transcriptional regulator, nitrite reductase regulator
D PAE61_04475 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D PAE61_09415 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_16110 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_00010 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_00105 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_05145 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_08060 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D PAE61_16135 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D PAE61_04080 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PAE61_03460 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D PAE61_17015 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D PAE61_06230 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PAE61_06925 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D PAE61_12365 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:paez03021]
D PAE61_05880 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PAE61_12235 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PAE61_12225 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PAE61_11180 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PAE61_06905 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PAE61_16040 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PAE61_03220 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D PAE61_15625 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PAE61_08720 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PAE61_12260 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PAE61_15465 fused response regulator/phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PAE61_11600 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D PAE61_11605 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PAE61_06230 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PAE61_17060 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PAE61_16085 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:paez03019]
D PAE61_04110 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D PAE61_17125 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PAE61_12485 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PAE61_02675 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PAE61_03080 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PAE61_15415 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PAE61_06960 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAE61_01790 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PAE61_16085 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PAE61_16835 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAE61_12145 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAE61_03550 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D PAE61_12160 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PAE61_12750 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PAE61_13410 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PAE61_16705 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PAE61_03690 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PAE61_13700 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D PAE61_11010 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:paez03011]
D PAE61_10440 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PAE61_10455 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PAE61_06860 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PAE61_11310 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PAE61_05845 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PAE61_01485 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PAE61_06805 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PAE61_05830 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PAE61_15210 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PAE61_06825 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PAE61_05875 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PAE61_06800 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PAE61_05870 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PAE61_05825 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PAE61_02800 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PAE61_07215 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PAE61_05805 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PAE61_01480 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PAE61_06850 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PAE61_17555 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PAE61_03385 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PAE61_12250 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PAE61_06845 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PAE61_06830 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PAE61_06835 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PAE61_05820 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PAE61_05835 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PAE61_01475 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PAE61_12245 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PAE61_12255 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PAE61_12240 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PAE61_15215 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PAE61_05810 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PAE61_05855 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PAE61_06865 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PAE61_05885 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PAE61_05840 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PAE61_07195 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PAE61_11590 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PAE61_10745 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PAE61_06840 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PAE61_05815 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PAE61_10740 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PAE61_12870 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PAE61_05800 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PAE61_05850 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PAE61_07190 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PAE61_09030 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PAE61_10785 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PAE61_05670 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PAE61_11585 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PAE61_14855 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PAE61_11950 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:paez03009]
D PAE61_17125 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PAE61_17120 era; GTPase Era K03595 era; GTPase
D PAE61_06975 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D PAE61_06230 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PAE61_15625 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PAE61_08720 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PAE61_12260 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PAE61_01525 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PAE61_17460 methyltransferase domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PAE61_06050 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PAE61_10600 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PAE61_02380 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PAE61_10625 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PAE61_16100 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PAE61_12360 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PAE61_04135 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PAE61_01365 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PAE61_10990 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D PAE61_13895 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PAE61_06390 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PAE61_12375 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D PAE61_15925 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PAE61_16690 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PAE61_17155 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PAE61_11385 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PAE61_05915 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D PAE61_03225 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PAE61_02790 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D PAE61_01895 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PAE61_12675 GNAT family protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D PAE61_07205 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D PAE61_15690 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PAE61_10610 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PAE61_04110 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D PAE61_13330 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PAE61_12900 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D PAE61_03555 hflX; GTPase HflX K03665 hflX; GTPase
D PAE61_17020 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PAE61_11185 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PAE61_13140 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D PAE61_15630 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D PAE61_13890 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D PAE61_11850 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D PAE61_15275 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D PAE61_08310 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:paez03016]
D PAE61_03400 ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D PAE61_09585 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAE61_03130 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAE61_11290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PAE61_01325 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PAE61_17195 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAE61_13255 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PAE61_07485 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAE61_02885 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAE61_08260 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PAE61_08385 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PAE61_12890 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PAE61_08685 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PAE61_13120 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PAE61_11275 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PAE61_13205 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PAE61_13190 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PAE61_06500 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAE61_15235 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PAE61_09835 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PAE61_12475 tRNA (guanine(46)-N(7))-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PAE61_13275 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PAE61_13150 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PAE61_04160 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAE61_17020 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PAE61_10985 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PAE61_16090 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PAE61_16095 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PAE61_06195 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PAE61_16825 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PAE61_05665 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PAE61_16130 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PAE61_09050 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PAE61_15250 ribonuclease H-like domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PAE61_09895 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PAE61_08245 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PAE61_08255 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PAE61_10930 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PAE61_11390 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PAE61_01940 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PAE61_10900 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PAE61_13815 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D PAE61_06330 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D PAE61_10935 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PAE61_07200 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PAE61_17155 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PAE61_08485 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PAE61_05655 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PAE61_16980 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PAE61_09010 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D PAE61_06600 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D PAE61_11480 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PAE61_03985 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D PAE61_12795 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D PAE61_09055 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PAE61_17435 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PAE61_01900 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PAE61_03510 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PAE61_02675 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PAE61_01790 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:paez03012]
D PAE61_15615 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PAE61_06175 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PAE61_11115 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PAE61_10450 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PAE61_12295 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PAE61_06815 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PAE61_06810 fusA; elongation factor G K02355 fusA; elongation factor G
D PAE61_08360 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D PAE61_01510 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PAE61_09760 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D PAE61_01515 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PAE61_10070 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PAE61_01620 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PAE61_15485 efp; elongation factor P K02356 efp; elongation factor P
D PAE61_15490 epmA; EF-P lysine aminoacylase EpmA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D PAE61_07050 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PAE61_07540 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D PAE61_16870 arfB; alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:paez03110]
D PAE61_09640 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D PAE61_14775 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PAE61_04615 AAA family ATPase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PAE61_10060 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PAE61_15990 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PAE61_16835 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAE61_12145 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAE61_16840 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PAE61_05620 molecular chaperone DjiA K05801 djlA; DnaJ like chaperone protein
D PAE61_16715 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D PAE61_16140 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PAE61_04625 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D PAE61_04635 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D PAE61_04630 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D PAE61_10940 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D PAE61_08205 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D PAE61_12140 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D PAE61_07380 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D PAE61_17440 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PAE61_12015 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PAE61_15950 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PAE61_12860 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D PAE61_11790 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PAE61_01885 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PAE61_01535 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PAE61_16005 trxA; thioredoxin K03671 TXN; thioredoxin
D PAE61_04545 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D PAE61_17240 trxA; thioredoxin K05838 ybbN; putative thioredoxin
D PAE61_12930 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D PAE61_08775 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D PAE61_12425 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:paez04131]
D PAE61_11110 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PAE61_13510 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAE61_11575 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAE61_15435 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:paez03032]
D PAE61_11150 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PAE61_12190 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PAE61_10125 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PAE61_01270 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PAE61_07530 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PAE61_10435 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PAE61_01225 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PAE61_13490 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PAE61_06900 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PAE61_00015 repC; plasmid replication protein RepC K18996 repC; replication initiation protein RepC
D PAE61_09360 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_09680 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_03875 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAE61_01230 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAE61_01560 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PAE61_17185 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAE61_03045 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAE61_09850 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAE61_16065 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAE61_07265 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PAE61_13085 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PAE61_09805 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAE61_08500 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PAE61_14730 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PAE61_05565 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PAE61_01245 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PAE61_12320 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PAE61_06010 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PAE61_12735 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:paez03036]
D PAE61_10125 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PAE61_17125 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PAE61_09380 strawberry notch family protein K26273 SBNO; protein strawberry notch
D PAE61_00140 strawberry notch family protein K26273 SBNO; protein strawberry notch
D PAE61_04250 strawberry notch family protein K26273 SBNO; protein strawberry notch
D PAE61_05175 strawberry notch family protein K26273 SBNO; protein strawberry notch
D PAE61_15960 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D PAE61_01270 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PAE61_07530 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PAE61_10435 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PAE61_10665 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D PAE61_01225 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PAE61_11625 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ
D PAE61_07535 dps; DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein
D PAE61_03550 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D PAE61_03840 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D PAE61_15750 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PAE61_04955 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PAE61_02650 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PAE61_11550 AAA family ATPase K03529 smc; chromosome segregation protein
D PAE61_07500 ScpA family protein K05896 scpA; segregation and condensation protein A
D PAE61_07505 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D PAE61_13595 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PAE61_13225 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D PAE61_12350 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PAE61_17270 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PAE61_12355 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D PAE61_13600 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D PAE61_13640 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D PAE61_13230 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PAE61_13590 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PAE61_02835 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D PAE61_11530 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D PAE61_07040 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PAE61_07770 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_15745 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_02005 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_11200 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PAE61_11205 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PAE61_11210 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D PAE61_11220 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D PAE61_07175 AAA family ATPase K03496 parA; chromosome partitioning protein
D PAE61_08295 ParA family protein K03496 parA; chromosome partitioning protein
D PAE61_09325 AAA family ATPase K03496 parA; chromosome partitioning protein
D PAE61_16105 ParA family protein K03496 parA; chromosome partitioning protein
D PAE61_00005 repA; plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein
D PAE61_01000 ParA family protein K03496 parA; chromosome partitioning protein
D PAE61_01110 ParA family protein K03496 parA; chromosome partitioning protein
D PAE61_05235 AAA family ATPase K03496 parA; chromosome partitioning protein
D PAE61_09415 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_16110 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_00010 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_00105 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_05145 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_12320 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PAE61_06010 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PAE61_16095 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PAE61_16100 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PAE61_10935 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PAE61_11410 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PAE61_09710 tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D PAE61_00175 site-specific integrase K04763 xerD; integrase/recombinase XerD
D PAE61_04770 site-specific integrase K04763 xerD; integrase/recombinase XerD
D PAE61_09020 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PAE61_05635 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:paez03400]
D PAE61_09250 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PAE61_11810 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PAE61_15290 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PAE61_11990 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PAE61_14835 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PAE61_01875 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PAE61_03310 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PAE61_06180 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PAE61_12880 trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PAE61_02505 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PAE61_03980 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PAE61_02605 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PAE61_17545 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PAE61_07650 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PAE61_17235 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PAE61_08675 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PAE61_08500 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PAE61_09805 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PAE61_11455 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PAE61_05990 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D PAE61_13325 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PAE61_12415 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAE61_05115 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PAE61_12235 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PAE61_12225 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PAE61_05880 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PAE61_11180 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PAE61_09655 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PAE61_03800 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PAE61_17500 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D PAE61_07160 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PAE61_17510 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PAE61_03875 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PAE61_01230 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PAE61_01560 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PAE61_17185 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PAE61_03045 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PAE61_09850 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAE61_16065 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PAE61_07265 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PAE61_09360 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_09680 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_14730 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PAE61_06065 recA; recombinase RecA K03553 recA; recombination protein RecA
D PAE61_15390 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PAE61_15400 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PAE61_15385 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PAE61_11395 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PAE61_02850 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PAE61_01235 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PAE61_08505 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PAE61_03370 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PAE61_07250 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D PAE61_13575 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PAE61_16010 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PAE61_08845 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PAE61_05565 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PAE61_01245 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PAE61_12735 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PAE61_01270 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PAE61_07530 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PAE61_10435 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PAE61_15415 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PAE61_15960 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D PAE61_06605 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PAE61_11840 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PAE61_02115 hypothetical protein K14160 imuA; protein ImuA
D PAE61_02110 DNA polymerase Y family protein K14161 imuB; protein ImuB
D PAE61_02105 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D PAE61_05965 ligase-associated DNA damage response DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PAE61_15530 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PAE61_15535 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:paez03029]
D PAE61_03605 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PAE61_15615 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PAE61_06175 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PAE61_10450 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PAE61_12295 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PAE61_06815 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PAE61_06810 fusA; elongation factor G K02355 fusA; elongation factor G
D PAE61_03345 helicase-related protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D PAE61_17120 era; GTPase Era K03595 era; GTPase
D PAE61_06500 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PAE61_17195 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PAE61_02885 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PAE61_07485 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PAE61_11045 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PAE61_17260 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PAE61_10880 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PAE61_11050 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PAE61_09360 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_09680 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PAE61_09735 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D PAE61_16835 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAE61_16140 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PAE61_12145 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAE61_12140 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D PAE61_16840 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PAE61_04160 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PAE61_08775 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D PAE61_09020 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PAE61_12710 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PAE61_12700 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PAE61_10710 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PAE61_05645 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAE61_12690 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D PAE61_16950 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D PAE61_15970 SCO family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:paez02000]
D PAE61_06595 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PAE61_12280 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PAE61_11645 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PAE61_13290 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PAE61_16700 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PAE61_07055 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PAE61_02540 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PAE61_03090 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PAE61_13860 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PAE61_09720 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D PAE61_10035 cysP; thiosulfate ABC transporter substrate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PAE61_10040 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PAE61_10045 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PAE61_10050 ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PAE61_08325 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PAE61_08320 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D PAE61_08315 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PAE61_08135 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PAE61_10025 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PAE61_08140 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PAE61_10030 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D PAE61_08130 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PAE61_10020 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PAE61_03655 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D PAE61_03650 thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein
D PAE61_03645 ATP-binding cassette domain-containing protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PAE61_13425 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PAE61_11930 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D PAE61_11935 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D PAE61_11925 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PAE61_08150 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PAE61_03015 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PAE61_08155 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PAE61_08160 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PAE61_03025 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PAE61_03020 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PAE61_08165 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PAE61_03010 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PAE61_14090 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PAE61_03865 choX; choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PAE61_14085 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D PAE61_03860 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D PAE61_14080 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PAE61_03855 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PAE61_04075 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D PAE61_04090 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D PAE61_04085 ATP-binding cassette domain-containing protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D PAE61_08600 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAE61_08625 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAE61_14185 ATP-binding cassette domain-containing protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAE61_07730 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAE61_16585 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAE61_14205 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PAE61_01345 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PAE61_14200 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PAE61_14195 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PAE61_07715 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PAE61_07720 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D PAE61_07725 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D PAE61_08640 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PAE61_08635 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D PAE61_08630 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D PAE61_08585 ABC transporter substrate-binding protein K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D PAE61_08590 sugar ABC transporter permease K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D PAE61_08595 carbohydrate ABC transporter permease K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D PAE61_14275 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D PAE61_14270 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D PAE61_14265 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PAE61_13745 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PAE61_13750 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PAE61_13755 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PAE61_13760 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PAE61_03565 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D PAE61_03580 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D PAE61_03585 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D PAE61_03570 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PAE61_14285 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PAE61_14295 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PAE61_14290 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PAE61_14280 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component
D PAE61_16600 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PAE61_16595 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D PAE61_16590 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PAE61_15010 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D PAE61_15005 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D PAE61_15000 ATP-binding cassette domain-containing protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PAE61_15910 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D PAE61_15905 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D PAE61_15900 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D PAE61_15895 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PAE61_02715 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D PAE61_02720 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D PAE61_02725 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D PAE61_05930 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PAE61_05935 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D PAE61_05940 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D PAE61_05945 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PAE61_15585 transporter substrate-binding domain-containing protein K23061 lhpP; hydroxyproline transporter system substrate-binding protein
D PAE61_15580 amino acid ABC transporter permease K23062 lhpM; hydroxyproline transport system permease protein
D PAE61_15575 amino acid ABC transporter permease K23063 lhpN; hydroxyproline transport system permease protein
D PAE61_15570 amino acid ABC transporter ATP-binding protein K23064 lhpO; hydroxyproline transport system ATP-binding protein [EC:7.4.2.1]
D PAE61_10300 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_15040 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_17305 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_01855 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_06305 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PAE61_10295 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_15070 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_17300 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_01845 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_06285 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D PAE61_10290 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_15075 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_17295 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_01850 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_06280 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D PAE61_10285 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_15060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_17290 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_01840 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_06300 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PAE61_10280 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_15065 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_17285 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_01860 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_06295 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PAE61_17145 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PAE61_17140 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D PAE61_17135 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D PAE61_09955 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D PAE61_09960 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D PAE61_09965 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D PAE61_03445 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PAE61_03435 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D PAE61_03440 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D PAE61_03450 ATP-binding cassette domain-containing protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PAE61_07080 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PAE61_07075 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D PAE61_07070 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D PAE61_07065 ATP-binding cassette domain-containing protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PAE61_07060 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PAE61_08210 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PAE61_08215 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D PAE61_08220 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D PAE61_08225 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D PAE61_08230 dipeptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D PAE61_11435 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAE61_14340 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAE61_16520 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAE61_06085 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PAE61_12665 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAE61_14345 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAE61_14470 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAE61_16515 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PAE61_12660 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAE61_14350 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAE61_14475 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAE61_16510 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PAE61_12655 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAE61_14355 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAE61_14480 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAE61_16505 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PAE61_14360 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAE61_14485 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PAE61_07300 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PAE61_07305 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D PAE61_07310 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D PAE61_07315 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D PAE61_07795 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PAE61_07800 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D PAE61_07805 ATP-binding cassette domain-containing protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D PAE61_06715 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D PAE61_06710 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D PAE61_06705 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D PAE61_02035 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D PAE61_02045 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D PAE61_02040 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein
D PAE61_02050 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D PAE61_16920 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PAE61_16915 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D PAE61_16910 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PAE61_11375 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D PAE61_11360 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D PAE61_11365 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PAE61_17315 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D PAE61_17325 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein
D PAE61_17330 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D PAE61_17320 manganese/iron ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D PAE61_09595 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D PAE61_12825 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D PAE61_16410 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D PAE61_11245 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PAE61_12810 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PAE61_12820 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PAE61_16400 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PAE61_11240 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PAE61_12815 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PAE61_16405 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PAE61_01550 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D PAE61_01545 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D PAE61_15270 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PAE61_02855 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D PAE61_02860 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PAE61_12430 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D PAE61_12435 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D PAE61_12440 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D PAE61_12445 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PAE61_13230 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PAE61_13225 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D PAE61_15675 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAE61_16990 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAE61_00750 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PAE61_09820 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAE61_15670 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PAE61_14330 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PAE61_14325 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PAE61_04175 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PAE61_14370 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PAE61_16670 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PAE61_11030 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D PAE61_06690 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PAE61_03880 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PAE61_04345 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PAE61_08375 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PAE61_03075 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PAE61_01405 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D PAE61_14615 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D PAE61_15435 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D PAE61_17230 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D PAE61_06530 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PAE61_13690 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D PAE61_13695 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PAE61_15280 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PAE61_02550 ammonium transporter K03320 amt; ammonium transporter, Amt family
D PAE61_07895 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_11155 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_17175 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_01260 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_03665 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_06660 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PAE61_15865 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PAE61_15870 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PAE61_05480 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PAE61_02640 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D PAE61_09110 DUF3772 domain-containing protein K05802 mscK; potassium-dependent mechanosensitive channel
D PAE61_03170 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D PAE61_16755 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PAE61_09785 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D PAE61_16315 OmpA family protein K02557 motB; chemotaxis protein MotB
D PAE61_11665 exbB; tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D PAE61_11660 exbD; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D PAE61_17405 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D PAE61_17410 ExbD/TolR family protein K03560 tolR; biopolymer transport protein TolR
D PAE61_13790 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D PAE61_05910 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D PAE61_00375 mercuric transporter MerT family protein K08363 merT; mercuric ion transport protein
D PAE61_00370 periplasmic mercury ion-binding protein K08364 merP; periplasmic mercuric ion binding protein
D PAE61_00360 merF; mercury resistance system transport protein MerF K19058 merC; mercuric ion transport protein
D PAE61_09715 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PAE61_17205 porin K08720 ompU; outer membrane protein OmpU
D PAE61_01250 outer membrane beta-barrel protein K16079 omp31; outer membrane immunogenic protein
D PAE61_10635 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PAE61_13395 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D PAE61_11690 FepA family TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D PAE61_16925 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D PAE61_16260 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D PAE61_08115 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PAE61_10335 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PAE61_06725 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PAE61_07790 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PAE61_06560 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PAE61_14025 polysaccharide biosynthesis/export family protein K16552 exoF; polysaccharide biosynthesis/export protein ExoF
D PAE61_06940 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D PAE61_09735 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D PAE61_13580 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D PAE61_16165 autotransporter assembly complex protein TamA K07278 tamA; translocation and assembly module TamA
D PAE61_16170 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D PAE61_15265 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D PAE61_15260 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D PAE61_01540 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D PAE61_17190 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D PAE61_11845 hemolysin family protein K06189 corC; hemolysin (HlyC) family protein
D PAE61_05715 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PAE61_07765 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_02000 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_15740 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_16885 efflux RND transporter permease subunit K21134 triC; multidrug efflux pump
D PAE61_10895 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D PAE61_15200 SMR family transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PAE61_02260 EamA family transporter K15269 pecM; probable blue pigment (indigoidine) exporter
D PAE61_05280 EamA family transporter K15269 pecM; probable blue pigment (indigoidine) exporter
D PAE61_17095 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D PAE61_00340 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D PAE61_01420 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PAE61_13315 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D PAE61_09870 cation acetate symporter K14393 actP; cation/acetate symporter
D PAE61_00720 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D PAE61_08185 cation:proton antiporter K03316 nhaP; Na+:H+ antiporter
D PAE61_11955 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D PAE61_13805 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D PAE61_03425 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D PAE61_08235 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D PAE61_03545 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D PAE61_03540 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D PAE61_01305 nucleobase:cation symporter-2 family protein K24206 uacT; uric acid transporter
D PAE61_09570 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PAE61_09225 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D PAE61_02865 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PAE61_13450 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D PAE61_04290 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D PAE61_16615 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D PAE61_02405 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D PAE61_14140 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D PAE61_14820 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D PAE61_14815 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PAE61_16445 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PAE61_16440 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein
D PAE61_14795 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D PAE61_04455 C4-dicarboxylate TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D PAE61_00885 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D PAE61_07840 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D PAE61_09345 arsenic resistance protein K03325 ACR3; arsenite transporter
D PAE61_04535 arsenic resistance protein K03325 ACR3; arsenite transporter
D PAE61_15380 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D PAE61_15375 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D PAE61_15370 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D PAE61_15365 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D PAE61_15360 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D PAE61_15355 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D PAE61_04120 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D PAE61_16660 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D PAE61_03030 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D PAE61_03845 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PAE61_11765 LysE family translocator K05835 rhtC; threonine efflux protein
D PAE61_17050 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D PAE61_17045 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D PAE61_07690 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_14925 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_15805 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_01380 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_04935 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_04990 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PAE61_07685 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D PAE61_14930 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D PAE61_01385 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D PAE61_14935 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D PAE61_01390 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D PAE61_15795 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D PAE61_15460 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D PAE61_17525 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D PAE61_00070 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D PAE61_00770 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D PAE61_13640 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D PAE61_06360 SemiSWEET family transporter K15383 K15383; MtN3 and saliva related transmembrane protein
D PAE61_11655 TonB C-terminal domain-containing protein K03832 tonB; periplasmic protein TonB
D PAE61_17425 OmpA family protein K03640 pal; peptidoglycan-associated lipoprotein
D PAE61_17420 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D PAE61_08200 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D PAE61_04115 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D PAE61_00200 molybdopterin-dependent oxidoreductase K08357 ttrA; tetrathionate reductase subunit A
D PAE61_00190 4Fe-4S dicluster domain-containing protein K08358 ttrB; tetrathionate reductase subunit B
D PAE61_00195 nrfD; polysulfide reductase NrfD K08359 ttrC; tetrathionate reductase subunit C
D PAE61_02535 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D PAE61_03085 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D PAE61_07770 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_15745 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_02005 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_16875 efflux RND transporter periplasmic adaptor subunit K21136 triA; membrane fusion protein, multidrug efflux system
D PAE61_16880 efflux RND transporter periplasmic adaptor subunit K21137 triB; membrane fusion protein, multidrug efflux system
D PAE61_13865 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D PAE61_15635 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D PAE61_08970 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D PAE61_02055 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:paez02044]
D PAE61_06560 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PAE61_02540 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PAE61_03090 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PAE61_02535 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D PAE61_03085 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D PAE61_15420 YggT family protein K02221 yggT; YggT family protein
D PAE61_09580 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D PAE61_16765 FHIPEP family type III secretion protein K02400 flhA; flagellar biosynthesis protein FlhA
D PAE61_16775 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PAE61_16735 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D PAE61_13060 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PAE61_16725 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PAE61_16720 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PAE61_13040 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PAE61_16770 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PAE61_00430 conjugal transfer protein TraF K03200 virB5; type IV secretion system protein VirB5
D PAE61_00395 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D PAE61_00425 type IV secretion system protein K03203 virB8; type IV secretion system protein VirB8
D PAE61_00420 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9
D PAE61_00415 TrbI/VirB10 family protein K03195 virB10; type IV secretion system protein VirB10
D PAE61_00410 ATPase, T2SS/T4P/T4SS family K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D PAE61_00245 relaxase/mobilization nuclease domain-containing protein K18434 virD2; type IV secretion system T-DNA border endonuclease VirD2
D PAE61_09210 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PAE61_00250 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PAE61_01060 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PAE61_04815 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PAE61_05320 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PAE61_09200 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D PAE61_04825 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D PAE61_05330 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D PAE61_09195 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D PAE61_04830 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D PAE61_05335 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D PAE61_09190 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D PAE61_04835 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D PAE61_05340 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D PAE61_09185 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D PAE61_04840 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D PAE61_05345 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D PAE61_09165 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D PAE61_04860 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D PAE61_05365 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D PAE61_09160 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D PAE61_04865 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D PAE61_05370 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D PAE61_09155 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D PAE61_04870 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI
D PAE61_05375 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D PAE61_09180 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D PAE61_04845 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D PAE61_05350 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D PAE61_09170 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D PAE61_04855 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D PAE61_05360 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D PAE61_01890 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PAE61_15950 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PAE61_12460 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PAE61_12265 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PAE61_12455 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PAE61_13300 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PAE61_05860 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PAE61_07240 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PAE61_11020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PAE61_12465 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PAE61_05645 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PAE61_01575 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D PAE61_01580 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PAE61_01585 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:paez02042]
D PAE61_09715 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:paez02022]
D PAE61_07020 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PAE61_15885 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PAE61_06795 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PAE61_13110 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PAE61_00025 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PAE61_07330 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D PAE61_00330 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D PAE61_11330 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PAE61_11325 response regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PAE61_11320 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PAE61_11315 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D PAE61_04100 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PAE61_10470 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PAE61_10465 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAE61_10485 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAE61_08700 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PAE61_08935 diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D PAE61_06055 ATP-binding protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D PAE61_08495 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D PAE61_15975 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PAE61_15965 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D PAE61_04340 ABC transporter substrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor
D PAE61_04335 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:paez02035]
D PAE61_10470 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PAE61_10475 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PAE61_10460 STAS domain-containing protein K03409 cheX; chemotaxis protein CheX
D PAE61_08705 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D PAE61_10480 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PAE61_08700 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PAE61_10465 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAE61_10485 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PAE61_03810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PAE61_13060 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PAE61_16720 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PAE61_13040 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PAE61_16770 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PAE61_16765 FHIPEP family type III secretion protein K02400 flhA; flagellar biosynthesis protein FlhA
D PAE61_16775 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PAE61_13485 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PAE61_01615 FliM/FliN family flagellar motor C-terminal domain-containing protein K02416 fliM; flagellar motor switch protein FliM
D PAE61_16725 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D PAE61_16735 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D PAE61_16335 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D PAE61_13025 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PAE61_13020 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D PAE61_13015 hypothetical protein K02415 fliL; flagellar protein FliL
D PAE61_16740 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D PAE61_13045 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PAE61_13055 FlgB family protein K02387 flgB; flagellar basal-body rod protein FlgB
D PAE61_13050 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PAE61_13855 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PAE61_13035 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D PAE61_13030 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PAE61_16320 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D PAE61_16325 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PAE61_16330 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D PAE61_02275 flagellin K02406 fliC; flagellin
D PAE61_16755 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PAE61_09785 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D PAE61_16315 OmpA family protein K02557 motB; chemotaxis protein MotB
D PAE61_02280 flaF; flagellar biosynthesis regulator FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF
D PAE61_02285 flbT; flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:paez04812]
D PAE61_11200 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PAE61_13590 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PAE61_13595 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PAE61_07175 AAA family ATPase K03496 parA; chromosome partitioning protein
D PAE61_08295 ParA family protein K03496 parA; chromosome partitioning protein
D PAE61_09325 AAA family ATPase K03496 parA; chromosome partitioning protein
D PAE61_16105 ParA family protein K03496 parA; chromosome partitioning protein
D PAE61_00005 repA; plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein
D PAE61_01000 ParA family protein K03496 parA; chromosome partitioning protein
D PAE61_01110 ParA family protein K03496 parA; chromosome partitioning protein
D PAE61_05235 AAA family ATPase K03496 parA; chromosome partitioning protein
D PAE61_09415 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_16110 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_00010 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_00105 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PAE61_05145 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:paez04147]
D PAE61_06960 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PAE61_13510 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PAE61_08095 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PAE61_11575 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PAE61_08285 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PAE61_12145 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PAE61_16835 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PAE61_06410 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PAE61_13390 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PAE61_12295 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PAE61_06815 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PAE61_09835 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PAE61_01835 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PAE61_10155 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16655 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_02595 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_04430 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06375 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_06655 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PAE61_16155 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PAE61_05865 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PAE61_12630 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PAE61_02615 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PAE61_16635 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PAE61_15605 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PAE61_10525 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PAE61_10720 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PAE61_01435 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03430 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_03465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PAE61_09665 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PAE61_15510 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PAE61_12950 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PAE61_01340 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PAE61_01930 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAE61_05005 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PAE61_17470 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PAE61_11465 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_06435 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PAE61_13660 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D PAE61_03620 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PAE61_06400 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PAE61_09015 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:paez02048]
D PAE61_09495 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PAE61_09475 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D PAE61_09470 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PAE61_14730 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PAE61_13090 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72]
D PAE61_01015 DNA adenine methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D PAE61_10125 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PAE61_00305 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D PAE61_05130 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D PAE61_00300 mcrC; 5-methylcytosine-specific restriction endonuclease system specificity protein McrC K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D PAE61_05125 calmodulin-binding protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D PAE61_00990 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE
D PAE61_00125 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D PAE61_00120 type II toxin-antitoxin system PrlF family antitoxin K19156 prlF; antitoxin PrlF
D PAE61_16200 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D PAE61_16205 plasmid stabilization protein K18923 stbD; antitoxin StbD
D PAE61_02120 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D PAE61_04375 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D PAE61_02125 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D PAE61_04270 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D PAE61_16185 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D PAE61_01150 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D PAE61_16190 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D PAE61_00810 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D PAE61_01155 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D PAE61_01215 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-]
D PAE61_13590 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PAE61_11200 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PAE61_12320 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PAE61_06010 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PAE61_09585 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAE61_03130 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PAE61_06115 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D PAE61_04160 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:paez01504]
D PAE61_06755 APH(3'') family aminoglycoside O-phosphotransferase K10673 strA; streptomycin 3"-kinase [EC:2.7.1.87]
D PAE61_06740 sul2; sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D PAE61_07770 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_15745 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_02005 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PAE61_07765 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_02000 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_15740 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PAE61_00550 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PAE61_06560 TolC family outer membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:paez00537]
D PAE61_01340 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PAE61_08285 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:paez03100]
D PAE61_02390 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PAE61_04200 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PAE61_06510 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PAE61_10695 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAE61_12180 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PAE61_03005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PAE61_03115 tRNA-Met K14230 tRNA-Met; tRNA Met
D PAE61_02085 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PAE61_12275 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PAE61_07275 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D PAE61_13445 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PAE61_00865 zinc-binding dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D PAE61_07695 Gfo/Idh/MocA family oxidoreductase K19181 afr; 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) [EC:1.1.1.292]
D PAE61_02140 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PAE61_10730 aldo/keto reductase K26057 smoB; 6-dehydroglucose reductase [EC:1.1.1.432]
D PAE61_11165 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D PAE61_14920 aldehyde dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]
D PAE61_15045 aldehyde dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]
D PAE61_08980 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D PAE61_17065 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D PAE61_04400 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D PAE61_10180 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PAE61_02155 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PAE61_05310 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PAE61_10615 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PAE61_02100 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PAE61_11130 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PAE61_03885 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PAE61_09930 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D PAE61_14770 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D PAE61_01495 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D PAE61_01805 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PAE61_07625 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PAE61_13435 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D PAE61_08880 LLM class flavin-dependent oxidoreductase K26058 smoC; sulfoquinovose monooxygenase [EC:1.14.14.181]
D PAE61_00350 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D PAE61_04025 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PAE61_07835 arsenate reductase family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PAE61_11260 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PAE61_07845 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PAE61_06555 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PAE61_06575 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PAE61_17150 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PAE61_00630 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PAE61_16055 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D PAE61_15145 hypothetical protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D PAE61_10780 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PAE61_08070 lysophospholipid acyltransferase family protein K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D PAE61_13155 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D PAE61_08650 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D PAE61_08430 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K14660 nodE; nodulation protein E [EC:2.3.1.-]
D PAE61_06460 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D PAE61_01970 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PAE61_02950 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D PAE61_03240 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PAE61_10380 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PAE61_16545 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PAE61_00060 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PAE61_02955 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PAE61_06970 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D PAE61_13705 HPr kinase/phosphatase C-terminal domain-containing protein K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D PAE61_07885 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D PAE61_11595 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D PAE61_17400 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PAE61_05625 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PAE61_15110 sulfatase-like hydrolase/transferase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D PAE61_03040 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PAE61_10910 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D PAE61_08570 glycoside hydrolase family 88 protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D PAE61_10590 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D PAE61_11035 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PAE61_02450 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PAE61_02455 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PAE61_12925 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D PAE61_08445 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PAE61_15880 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PAE61_09535 DSD1 family PLP-dependent enzyme K18425 dhaa; 3-hydroxy-D-aspartate aldolase [EC:4.1.3.41]
D PAE61_00260 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D PAE61_15015 sugar phosphate isomerase/epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D PAE61_08435 TIM barrel protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D PAE61_16550 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D PAE61_16555 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D PAE61_16560 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D PAE61_16565 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D PAE61_16570 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D PAE61_16575 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D PAE61_07150 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D PAE61_00650 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D PAE61_01650 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D PAE61_10570 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PAE61_10565 LutB/LldF family L-lactate oxidation iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PAE61_10560 LUD domain-containing protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D PAE61_08370 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D PAE61_08065 ferredoxin family protein K05524 fdxA; ferredoxin
D PAE61_10360 nitric oxide reductase D protein K02448 norD; nitric oxide reductase NorD protein
D PAE61_10355 cytochrome c oxidase subunit 3 K02164 norE; nitric oxide reductase NorE protein
D PAE61_10365 CbbQ/NirQ/NorQ/GpvN family protein K04748 norQ; nitric oxide reductase NorQ protein
D PAE61_13655 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D PAE61_10330 dodecin family protein K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D PAE61_15525 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D PAE61_02905 EI24 domain-containing protein K06203 cysZ; CysZ protein
D PAE61_09245 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D PAE61_17210 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D PAE61_03525 heme biosynthesis protein HemY K02498 hemY; HemY protein
D PAE61_17535 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D PAE61_03390 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D PAE61_05590 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
D PAE61_09925 ring-cleaving dioxygenase K15975 K15975; glyoxalase family protein
D PAE61_07465 DoxX family protein K15977 K15977; putative oxidoreductase
D PAE61_05770 DoxX family membrane protein K15977 K15977; putative oxidoreductase
D PAE61_09950 VOC family protein K06999 K06999; phospholipase/carboxylesterase
D PAE61_03930 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PAE61_08390 cold-shock protein K03704 cspA; cold shock protein
D PAE61_11750 cold shock domain-containing protein K03704 cspA; cold shock protein
C 99974 Translation
D PAE61_00755 rbbA; ribosome-associated ATPase/putative transporter RbbA K13926 rbbA; ribosome-dependent ATPase
D PAE61_00590 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
D PAE61_05955 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D PAE61_10595 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PAE61_01450 tig; trigger factor K03545 tig; trigger factor
D PAE61_14765 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D PAE61_00560 ferric reductase-like transmembrane domain-containing protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D PAE61_08350 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D PAE61_10660 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D PAE61_15520 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D PAE61_04150 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D PAE61_03795 proteasome-type protease K07395 K07395; putative proteasome-type protease
D PAE61_09565 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D PAE61_03560 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D PAE61_06915 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D PAE61_05120 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D PAE61_04140 YraN family protein K07460 yraN; putative endonuclease
D PAE61_09435 DNA-protecting protein DprA K04096 smf; DNA processing protein
D PAE61_12725 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D PAE61_02180 tyrosine-type recombinase/integrase K07357 fimB; type 1 fimbriae regulatory protein FimB
D PAE61_05900 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D PAE61_00450 IS6 family transposase K18320 IS15; transposase, IS6 family
D PAE61_00900 IS6 family transposase K18320 IS15; transposase, IS6 family
D PAE61_04970 IS6 family transposase K18320 IS15; transposase, IS6 family
D PAE61_04580 transposase K07483 K07483; transposase
D PAE61_04650 transposase K07483 K07483; transposase
D PAE61_04670 transposase K07483 K07483; transposase
D PAE61_05535 transposase K07483 K07483; transposase
D PAE61_04575 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D PAE61_04675 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D PAE61_05530 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D PAE61_00485 IS110 family transposase K07486 K07486; transposase
D PAE61_00495 IS110 family transposase K07486 K07486; transposase
D PAE61_04300 IS110 family transposase K07486 K07486; transposase
D PAE61_00705 IS256 family transposase K07493 K07493; putative transposase
D PAE61_15150 IS3 family transposase K07497 K07497; putative transposase
D PAE61_00780 IS6 family transposase K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D PAE61_07255 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PAE61_02825 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D PAE61_16860 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PAE61_01785 putP; sodium/proline symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family
D PAE61_13195 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PAE61_13210 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PAE61_12480 hypothetical protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D PAE61_10235 transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D PAE61_12390 septation protein IspZ K06190 ispZ; intracellular septation protein
D PAE61_05405 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D PAE61_09135 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D PAE61_03680 peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D PAE61_09770 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D PAE61_11855 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PAE61_09865 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D PAE61_06945 capsule biosynthesis protein CapA K07265 kpsS; capsular polysaccharide export protein
D PAE61_06935 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein
D PAE61_02875 GH25 family lysozyme K07273 acm; lysozyme
D PAE61_07865 outer membrane beta-barrel protein K07275 ompW; outer membrane protein
D PAE61_08730 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D PAE61_00760 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D PAE61_11710 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
D PAE61_08990 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D PAE61_08965 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D PAE61_13335 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D PAE61_15890 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D PAE61_11670 glucan biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein
D PAE61_02760 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D PAE61_06720 hemin-degrading factor K07225 hmuS; putative hemin transport protein
D PAE61_07675 peptidase K07231 K07231; putative iron-regulated protein
D PAE61_10385 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PAE61_02845 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D PAE61_16300 MlaD family protein K06192 pqiB; paraquat-inducible protein B
D PAE61_02670 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D PAE61_13775 tRNA-binding protein K06878 K06878; tRNA-binding protein
D PAE61_02685 group III truncated hemoglobin K06886 glbN; hemoglobin
D PAE61_08930 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D PAE61_00655 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D PAE61_14050 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PAE61_03965 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D PAE61_04165 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PAE61_04180 SufD family Fe-S cluster assembly protein K09015 sufD; Fe-S cluster assembly protein SufD
D PAE61_16060 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D PAE61_01465 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D PAE61_15945 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D PAE61_10410 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D PAE61_16665 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D PAE61_17355 VOC family protein K04750 phnB; PhnB protein
D PAE61_07830 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D PAE61_11270 SlyX family protein K03745 slyX; SlyX protein
D PAE61_01920 CreA family protein K05805 creA; CreA protein
D PAE61_16305 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D PAE61_16310 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D PAE61_11000 TIGR01620 family protein K08990 ycjF; putative membrane protein
C 99997 Function unknown
D PAE61_13415 TPM domain-containing protein K06872 K06872; uncharacterized protein
D PAE61_03150 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D PAE61_11005 YcjX family protein K06918 K06918; uncharacterized protein
D PAE61_01590 ATP-binding protein K06923 K06923; uncharacterized protein
D PAE61_01375 CoA-binding protein K06929 K06929; uncharacterized protein
D PAE61_05970 pdeM; ligase-associated DNA damage response endonuclease PdeM K06953 K06953; uncharacterized protein
D PAE61_09940 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D PAE61_17350 VOC family protein K06996 K06996; uncharacterized protein
D PAE61_02680 VOC family protein K06996 K06996; uncharacterized protein
D PAE61_03350 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D PAE61_04035 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D PAE61_01125 UPF0149 family protein K07039 K07039; uncharacterized protein
D PAE61_05025 UPF0149 family protein K07039 K07039; uncharacterized protein
D PAE61_05580 zinc metallopeptidase K07054 K07054; uncharacterized protein
D PAE61_08770 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D PAE61_14560 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D PAE61_00830 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D PAE61_05600 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D PAE61_06425 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D PAE61_08905 permease K07089 K07089; uncharacterized protein
D PAE61_06775 permease K07089 K07089; uncharacterized protein
D PAE61_09230 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PAE61_10405 TSUP family transporter K07090 K07090; uncharacterized protein
D PAE61_12080 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PAE61_15500 TSUP family transporter K07090 K07090; uncharacterized protein
D PAE61_01760 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PAE61_02660 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PAE61_06585 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PAE61_01395 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D PAE61_04880 ATP-binding protein K07133 K07133; uncharacterized protein
D PAE61_05640 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D PAE61_17245 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D PAE61_05660 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D PAE61_11745 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D PAE61_02970 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D PAE61_02915 DUF167 domain-containing protein K09131 K09131; uncharacterized protein
D PAE61_12110 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D PAE61_03495 YciI family protein K09780 K09780; uncharacterized protein
D PAE61_13740 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D PAE61_16115 YbaN family protein K09790 K09790; uncharacterized protein
D PAE61_17250 Trm112 family protein K09791 K09791; uncharacterized protein
D PAE61_10960 DUF465 domain-containing protein K09794 K09794; uncharacterized protein
D PAE61_11695 DUF475 domain-containing protein K09799 K09799; uncharacterized protein
D PAE61_00475 BrnT family toxin K09803 K09803; uncharacterized protein
D PAE61_11965 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D PAE61_16540 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D PAE61_16295 PqiC family protein K09857 K09857; uncharacterized protein
D PAE61_01635 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D PAE61_11565 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D PAE61_11405 DUF484 family protein K09921 K09921; uncharacterized protein
D PAE61_11190 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D PAE61_05780 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D PAE61_06075 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein
D PAE61_07580 putative glycolipid-binding domain-containing protein K09957 K09957; uncharacterized protein
D PAE61_10080 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein
D PAE61_12135 TraB/GumN family protein K09973 K09973; uncharacterized protein
D PAE61_09265 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein
D PAE61_13455 ClpXP protease specificity-enhancing factor SspB K09985 K09985; uncharacterized protein
D PAE61_08440 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D PAE61_03405 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein
D PAE61_10825 VWA domain-containing protein K09989 K09989; uncharacterized protein
D PAE61_06070 imelysin family protein K07338 K07338; uncharacterized protein
D PAE61_15620 RNA-binding protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024