+E Transcription factors KO #

  Transcription Factors - Pseudomonas aeruginosa LESB58

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D PLES_08511 probable transcriptional regulator K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D PLES_04141 chpD; probable transcriptional regulator K06599 chpD; AraC family transcriptional regulator, chemosensory pili system protein ChpD D PLES_07001 pchR; transcriptional regulator PchR K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D PLES_02451 probable transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D PLES_05611 probable transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D PLES_29711 probable transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D PLES_36161 exsA; transcriptional regulator ExsA K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D PLES_10791 probable transcriptional regulator K07506 K07506; AraC family transcriptional regulator D PLES_24081 probable transcriptional regulator K07506 K07506; AraC family transcriptional regulator D PLES_32101 ada; O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D PLES_57851 probable transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator D PLES_44231 argR; transcriptional regulator ArgR K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator D PLES_57761 probable transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D PLES_07431 probable transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator C LysR family D PLES_41371 probable transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PLES_11291 probable transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PLES_29191 probable transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PLES_45591 probable transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PLES_53001 probable transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PLES_56881 probable transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PLES_01531 pcaQ; transcriptional regulator PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D PLES_14471 metR; transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D PLES_57391 probable transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D PLES_47421 iciA; inhibitor of chromosome initiation IciA K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PLES_32671 cynR; transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D PLES_35751 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D PLES_02121 probable transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D PLES_21431 probable transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D PLES_33251 probable transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D PLES_08621 ampR; transcriptional regulator AmpR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D PLES_32651 probable transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D PLES_43221 mvfR; Transcriptional regulator MvfR K19735 mvfR; LysR family transcriptional regulator, quorum-sensing system regulator MvfR D PLES_58231 probable transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D PLES_01341 probable transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D PLES_58321 probable transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator D PLES_27851 catR; transcriptional regulator CatR K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D PLES_25791 pltR; PltR K22711 pltR; LysR family transcriptional regulator, pyoluteorin biosynthesis regulator D PLES_34711 probable transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D PLES_00361 trpI; transcriptional regulator TrpI K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator C DeoR family D PLES_14511 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D PLES_39221 probable transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family D PLES_33741 rbsR; ribose operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PLES_30451 ptxS; transcriptional regulator PtxS K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D PLES_14701 fruR; fructose transport system repressor FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D PLES_29851 gntR; transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor C GntR family D PLES_16791 probable transcriptional regulator K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D PLES_54951 hutC; histidine utilization repressor HutC K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D PLES_12231 probable transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D PLES_30051 probable transcriptional regulator K03710 K03710; GntR family transcriptional regulator D PLES_51541 probable transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PLES_01211 probable transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PLES_57511 glcC; transcriptional regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D PLES_02641 probable transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PLES_58261 probable transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PLES_07621 probable transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PLES_52921 probable transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator C TetR/AcrR family D PLES_57691 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D PLES_04341 probable transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PLES_01681 probable transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PLES_39071 probable transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PLES_34601 probable transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PLES_31291 probable transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PLES_44791 probable transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PLES_23101 probable transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PLES_52161 probable transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PLES_13061 probable transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D PLES_12611 probable transcriptional regulator K18130 nalC; TetR/AcrR family transcriptional regulator, transcriptional repressor NalC D PLES_14591 probable transcriptional regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon D PLES_49851 nfxB; transcriptional regulator NfxB K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D PLES_52761 desT; DesT K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D PLES_21791 atuR; putative repressor of atu genes K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D PLES_25891 pltZ; PltZ K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D PLES_30891 hypothetical protein K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response C Lrp/AsnC family D PLES_51691 probable transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PLES_27171 probable transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PLES_57031 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PLES_10101 probable transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PLES_48881 probable transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PLES_30581 bkdR; transcriptional regulator BkdR K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PLES_32941 probable transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator C LuxR family D PLES_39841 lasR; transcriptional regulator LasR K18304 lasR; LuxR family transcriptional regulator, quorum-sensing system regulator LasR D PLES_15351 rhlR; transcriptional regulator RhlR K18099 rhlR; LuxR family transcriptional regulator, quorum-sensing system regulator RhlR D PLES_41831 probable transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1 D PLES_35701 probable transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D PLES_10561 probable transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein C MarR family D PLES_02501 probable transcriptional regulator K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR D PLES_17231 probable transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D PLES_04221 mexR; multidrug resistance operon repressor MexR K18131 mexR; MarR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon D PLES_37241 probable transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D PLES_22151 probable transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D PLES_22401 probable transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D PLES_26901 merR; Regulatory protein merR K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D PLES_51631 probable transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D PLES_30311 probable transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D PLES_26141 transcriptional regulator, MerR family K19592 golS; MerR family transcriptional regulator, gold-responsive activator of gol and ges genes D PLES_50451 probable transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D PLES_51491 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PLES_29181 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PLES_58951 np20; transcriptional regulator np20 K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D PLES_02331 probable transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D PLES_01561 pcaR; transcriptional regulator PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein C CRP/FNR family D PLES_06311 vfr; transcriptional regulator Vfr K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PLES_02711 probable transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PLES_22541 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PLES_37841 anr; transcriptional regulator Anr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D PLES_05241 dnr; transcriptional regulator Dnr K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator C Rrf2 family D PLES_11591 putative Rrf2 family protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor C ArsR family D PLES_30271 arsR; ArsR protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D PLES_26241 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D PLES_26161 hypothetical protein K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family C PadR family C Other families D PLES_58331 probable transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D PLES_18841 probable transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D PLES_06481 birA; BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PLES_52381 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PLES_31041 propionate catabolism operon regulator prpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D PLES_15501 orf2; Ner-like protein K07724 ner; Ner family transcriptional regulator D PLES_42241 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D PLES_07801 acoR; transcriptional regulator AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D PLES_09551 probable transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D PLES_29441 probable transcriptional regulator K11917 sfa3; sigma-54 dependent transcriptional regulator D PLES_36641 probable transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator D PLES_24391 probable transcriptional regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator D PLES_42731 conserved hypothetical protein K02647 cdaR; carbohydrate diacid regulator D PLES_41131 probable transcriptional regulator K06714 rocR; arginine utilization regulatory protein D PLES_04831 probable molybdenum transport regulator K02019 modE; molybdate transport system regulatory protein D PLES_11101 hypothetical protein K21829 dauR; D-arginine utilization repressor D PLES_22891 putative transcriptional regulator K07727 K07727; putative transcriptional regulator D PLES_57991 probable transcriptional regulator K07727 K07727; putative transcriptional regulator D PLES_08991 probable transcriptional regulator K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D PLES_45611 putA; proline dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D PLES_16691 nosR; regulatory protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D PLES_44611 bolA; morphogene protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D PLES_59581 spoOJ; chromosome partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PLES_25131 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PLES_13341 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PLES_44431 phhR; transcriptional regulator PhhR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D PLES_28451 probable transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D PLES_43161 Putative glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D PLES_56681 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D PLES_04011 pyrR; transcriptional regulator PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D PLES_27091 ORF_C109; phage-related protein K07733 alpA; prophage regulatory protein D PLES_07451 putative transcriptional regulator K07734 paiB; transcriptional regulator D PLES_04031 putative transcriptional activator of alginate synthesis K07735 algH; putative transcriptional regulator D PLES_59321 putative C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor D PLES_51081 dksA; suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PLES_09191 putative ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D PLES_49641 rtcR; transcriptional regulator RtcR K14414 rtcR; transcriptional regulatory protein RtcR D PLES_48001 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0