+D GENES KO
#
KEGG Orthology (KO) - Paenarthrobacter sp. GOM3
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pago00010]
D IRJ34_03760 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_07005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_08450 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_10575 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IRJ34_03065 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IRJ34_14910 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IRJ34_06310 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IRJ34_02375 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_03115 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_07015 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_05330 triose-phosphate isomerase family protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IRJ34_10545 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IRJ34_03070 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_10535 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_12110 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_10540 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D IRJ34_04010 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D IRJ34_06120 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IRJ34_09235 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IRJ34_09595 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D IRJ34_12225 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IRJ34_16640 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IRJ34_08785 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_09930 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D IRJ34_15360 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D IRJ34_10270 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D IRJ34_13155 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D IRJ34_03185 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IRJ34_15365 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D IRJ34_02205 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_02580 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_16480 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_17250 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_06205 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D IRJ34_18415 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D IRJ34_00395 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IRJ34_08650 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D IRJ34_03800 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D IRJ34_02430 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D IRJ34_14470 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:pago00020]
D IRJ34_14015 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D IRJ34_08315 bifunctional 2-methylcitrate synthase/citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D IRJ34_08960 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D IRJ34_05810 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D IRJ34_13205 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_05010 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D IRJ34_05005 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D IRJ34_06030 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IRJ34_06025 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IRJ34_06040 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IRJ34_06035 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D IRJ34_06295 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D IRJ34_12670 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D IRJ34_08440 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D IRJ34_03800 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D IRJ34_12225 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IRJ34_16640 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IRJ34_08785 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pago00030]
D IRJ34_10575 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IRJ34_10570 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D IRJ34_12355 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D IRJ34_10560 pgl; (GenBank) 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D IRJ34_00015 gnd; (GenBank) decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D IRJ34_12155 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D IRJ34_03105 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IRJ34_09130 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IRJ34_03095 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IRJ34_10585 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IRJ34_03100 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D IRJ34_10580 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D IRJ34_03110 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IRJ34_05310 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IRJ34_11990 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IRJ34_03085 hxlA; (GenBank) 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D IRJ34_03135 hxlA; (GenBank) 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D IRJ34_03080 hxlB; (GenBank) 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D IRJ34_06565 deoC; (GenBank) deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D IRJ34_05405 PfkB family carbohydrate kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D IRJ34_18060 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D IRJ34_00395 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IRJ34_06490 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D IRJ34_20135 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D IRJ34_02460 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D IRJ34_13650 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D IRJ34_20150 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D IRJ34_02375 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_03115 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_07015 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_06310 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IRJ34_03065 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IRJ34_14910 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:pago00040]
D IRJ34_02310 uxaC; (GenBank) glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D IRJ34_02320 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D IRJ34_02315 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D IRJ34_05710 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D IRJ34_14320 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IRJ34_18405 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D IRJ34_03105 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IRJ34_09130 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IRJ34_18410 araA; (GenBank) L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D IRJ34_18400 araB; (GenBank) ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D IRJ34_18385 xylB; (GenBank) xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D IRJ34_18380 xylA; (GenBank) xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D IRJ34_00255 D-arabinono-1,4-lactone oxidase K00594 xyoA; alditol oxidase [EC:1.1.3.41]
D IRJ34_18430 rhaI; (GenBank) L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D IRJ34_18440 rhamnulokinase family protein K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
C 00051 Fructose and mannose metabolism [PATH:pago00051]
D IRJ34_09500 glycosyl hydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D IRJ34_00285 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IRJ34_01805 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IRJ34_03000 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IRJ34_09725 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IRJ34_06320 manA; (GenBank) mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IRJ34_09435 manA; (GenBank) mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IRJ34_03815 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IRJ34_06660 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IRJ34_06045 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D IRJ34_18900 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D IRJ34_18895 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D IRJ34_18430 rhaI; (GenBank) L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D IRJ34_18440 rhamnulokinase family protein K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D IRJ34_03065 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IRJ34_14910 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IRJ34_06310 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IRJ34_19175 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D IRJ34_01335 hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D IRJ34_00255 D-arabinono-1,4-lactone oxidase K00594 xyoA; alditol oxidase [EC:1.1.3.41]
D IRJ34_18380 xylA; (GenBank) xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D IRJ34_02375 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_03115 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_07015 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_05330 triose-phosphate isomerase family protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IRJ34_10545 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IRJ34_03005 glycoside hydrolase family 32 protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D IRJ34_06665 glycoside hydrolase family 32 protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D IRJ34_03110 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IRJ34_05310 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IRJ34_11990 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IRJ34_14360 PTS sugar transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D IRJ34_01330 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D IRJ34_19180 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D IRJ34_03635 HAD-IA family hydrolase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
C 00052 Galactose metabolism [PATH:pago00052]
D IRJ34_06205 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D IRJ34_18415 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D IRJ34_06195 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IRJ34_06200 galT; (GenBank) galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D IRJ34_00525 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IRJ34_14005 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IRJ34_14320 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IRJ34_00395 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IRJ34_03760 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_07005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_08450 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_14165 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D IRJ34_16260 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D IRJ34_13405 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D IRJ34_09485 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D IRJ34_16525 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D IRJ34_18410 araA; (GenBank) L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D IRJ34_03065 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IRJ34_14910 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IRJ34_01120 class II fructose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D IRJ34_04340 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IRJ34_09735 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IRJ34_15630 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IRJ34_04135 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D IRJ34_15075 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:pago00053]
D IRJ34_05710 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D IRJ34_02460 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D IRJ34_18900 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D IRJ34_18405 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IRJ34_16305 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D IRJ34_00180 mandelate racemase/muconate lactonizing enzyme family protein K20023 talrD-galrD; L-talarate/galactarate dehydratase [EC:4.2.1.156 4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:pago00500]
D IRJ34_04340 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IRJ34_09735 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IRJ34_15630 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D IRJ34_04135 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D IRJ34_15075 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D IRJ34_06670 glycoside hydrolase family 68 protein K00692 sacB; levansucrase [EC:2.4.1.10]
D IRJ34_09730 glycoside hydrolase family 32 protein K18775 lf2; levanbiose-producing levanase [EC:3.2.1.64]
D IRJ34_14320 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IRJ34_02785 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D IRJ34_09420 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D IRJ34_14780 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D IRJ34_02430 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D IRJ34_14470 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D IRJ34_10795 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D IRJ34_04100 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D IRJ34_04085 glgP; (GenBank) alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D IRJ34_04070 glgX; (GenBank) glycogen debranching protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D IRJ34_04095 treS; (GenBank) maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D IRJ34_04090 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D IRJ34_10800 glgA; (GenBank) glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D IRJ34_14510 glgX; (GenBank) glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D IRJ34_14505 treY; (GenBank) malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D IRJ34_14500 treZ; (GenBank) malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D IRJ34_04220 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D IRJ34_04215 otsB; (GenBank) trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D IRJ34_01390 glycoside hydrolase family 65 protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D IRJ34_00395 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IRJ34_03760 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_07005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_08450 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_10575 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IRJ34_00285 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IRJ34_01805 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IRJ34_03000 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IRJ34_09725 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:pago00620]
D IRJ34_02205 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_02580 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_16480 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_17250 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_12225 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IRJ34_16640 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IRJ34_08785 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_09930 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D IRJ34_15360 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D IRJ34_10270 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D IRJ34_13155 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D IRJ34_03185 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D IRJ34_09235 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IRJ34_00250 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_06705 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_05390 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IRJ34_15365 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D IRJ34_01400 alpha-hydroxy acid oxidase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D IRJ34_16330 alpha-hydroxy acid oxidase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D IRJ34_01555 thiamine pyrophosphate-requiring protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D IRJ34_10155 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D IRJ34_16720 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D IRJ34_19045 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D IRJ34_08440 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D IRJ34_12670 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D IRJ34_06295 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D IRJ34_03435 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D IRJ34_03800 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D IRJ34_09595 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D IRJ34_03275 aceB; (GenBank) malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D IRJ34_16725 aceB; (GenBank) malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_11240 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D IRJ34_17120 hypothetical protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D IRJ34_15415
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pago00630]
D IRJ34_03280 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D IRJ34_03275 aceB; (GenBank) malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D IRJ34_16725 aceB; (GenBank) malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D IRJ34_14015 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D IRJ34_08315 bifunctional 2-methylcitrate synthase/citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D IRJ34_08960 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D IRJ34_02205 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_02580 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_16480 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_17250 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_00250 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_06705 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_06770 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D IRJ34_06765 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit
D IRJ34_04140 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D IRJ34_09645 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D IRJ34_09970 catalase K03781 katE; catalase [EC:1.11.1.6]
D IRJ34_15340 catalase K03781 katE; catalase [EC:1.11.1.6]
D IRJ34_10500 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D IRJ34_20595 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D IRJ34_17430 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D IRJ34_09620 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D IRJ34_19320 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D IRJ34_08670 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_08715 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_05935 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19005 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19760 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_04680 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IRJ34_19775 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IRJ34_04685 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IRJ34_19770 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_04690 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IRJ34_08410 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IRJ34_19765 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IRJ34_17370 gcl; (GenBank) glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D IRJ34_01565 TIM barrel protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D IRJ34_17360 TIM barrel protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D IRJ34_12175 NAD(P)-dependent oxidoreductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D IRJ34_17365 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D IRJ34_00330 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IRJ34_17375 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IRJ34_20135 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D IRJ34_13205 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D IRJ34_09545 fdh; (GenBank) formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D IRJ34_09550 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D IRJ34_02125 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D IRJ34_05930 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D IRJ34_19035 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pago00640]
D IRJ34_02205 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_02580 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_16480 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_17250 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_07615 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_12760 thiamine pyrophosphate-dependent enzyme K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_15720 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_19360 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_07620 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_12765 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_15715 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_19355 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_07625 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IRJ34_15710 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IRJ34_19350 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_10805 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_00250 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_06705 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_15390 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D IRJ34_06770 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D IRJ34_06765 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit
D IRJ34_05005 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D IRJ34_05010 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D IRJ34_02170 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D IRJ34_05035 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D IRJ34_18470 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D IRJ34_08315 bifunctional 2-methylcitrate synthase/citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D IRJ34_08325 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D IRJ34_08960 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D IRJ34_08320 prpB; (GenBank) methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D IRJ34_03280 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
C 00650 Butanoate metabolism [PATH:pago00650]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_05315 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IRJ34_16015 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_16020 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_19810 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D IRJ34_06030 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IRJ34_06025 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IRJ34_06040 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IRJ34_06035 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D IRJ34_19650 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D IRJ34_15390 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D IRJ34_06425 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IRJ34_19415 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IRJ34_20440 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D IRJ34_01985 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D IRJ34_07660 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D IRJ34_01980 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D IRJ34_07665 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D IRJ34_01700 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D IRJ34_05165 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IRJ34_12615 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IRJ34_12610 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pago00660]
D IRJ34_05165 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IRJ34_12615 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IRJ34_12610 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IRJ34_05005 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D IRJ34_05010 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D IRJ34_12490 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D IRJ34_12485 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D IRJ34_12560 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pago00562]
D IRJ34_04940 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D IRJ34_06855 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D IRJ34_14490 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D IRJ34_11635 CDP-alcohol phosphatidyltransferase family protein K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-]
D IRJ34_03960 alkaline phosphatase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D IRJ34_15175 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D IRJ34_01570 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D IRJ34_05045 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D IRJ34_05100 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D IRJ34_05040 sugar phosphate isomerase/epimerase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D IRJ34_10045 sugar phosphate isomerase/epimerase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D IRJ34_05030 iolD; (GenBank) 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D IRJ34_05060 iolB; (GenBank) 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D IRJ34_05020 iolC; (GenBank) 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D IRJ34_02170 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D IRJ34_05035 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D IRJ34_18470 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D IRJ34_05330 triose-phosphate isomerase family protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IRJ34_10545 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pago00190]
D IRJ34_04365 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D IRJ34_06145 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D IRJ34_06030 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IRJ34_06025 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IRJ34_06040 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IRJ34_06035 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D IRJ34_11160 Rieske 2Fe-2S domain-containing protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D IRJ34_11165 cytochrome bc complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D IRJ34_11155 c-type cytochrome K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D IRJ34_10590 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D IRJ34_11180 cytochrome c oxidase subunit 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D IRJ34_11150 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D IRJ34_11185 ctaD; (GenBank) cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D IRJ34_11190 coxB; (GenBank) cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D IRJ34_10615 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D IRJ34_08850 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D IRJ34_08855 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D IRJ34_13005 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D IRJ34_12995 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D IRJ34_13000 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D IRJ34_13010 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D IRJ34_12990 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D IRJ34_13025 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D IRJ34_13015 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D IRJ34_13020 atpE; (GenBank) ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D IRJ34_00575 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D IRJ34_14965 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D IRJ34_20225 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pago00710]
D IRJ34_10540 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D IRJ34_03070 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_10535 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_12110 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_02375 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_03115 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_07015 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_06310 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IRJ34_03095 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IRJ34_10585 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IRJ34_03110 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IRJ34_05310 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IRJ34_11990 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IRJ34_05330 triose-phosphate isomerase family protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IRJ34_10545 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IRJ34_03105 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IRJ34_09130 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IRJ34_03100 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D IRJ34_10580 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D IRJ34_03435 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:pago00720]
D IRJ34_09595 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D IRJ34_03435 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D IRJ34_08440 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D IRJ34_06295 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D IRJ34_06030 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D IRJ34_06025 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D IRJ34_06040 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D IRJ34_06035 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D IRJ34_05010 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D IRJ34_05005 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_05810 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D IRJ34_08960 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D IRJ34_14485 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D IRJ34_02110 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D IRJ34_05940 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D IRJ34_02115 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D IRJ34_02205 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_02580 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_16480 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_17250 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:pago00680]
D IRJ34_02100 fdhA; (GenBank) formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D IRJ34_10095 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D IRJ34_09545 fdh; (GenBank) formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D IRJ34_09550 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D IRJ34_05935 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19005 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19760 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_17430 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D IRJ34_06120 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IRJ34_03435 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D IRJ34_02375 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_03115 fbaA; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_07015 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IRJ34_06310 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D IRJ34_03065 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IRJ34_14910 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IRJ34_03080 hxlB; (GenBank) 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D IRJ34_03085 hxlA; (GenBank) 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D IRJ34_03135 hxlA; (GenBank) 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D IRJ34_02205 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_02580 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_16480 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_17250 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_09595 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D IRJ34_04010 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D IRJ34_12600 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IRJ34_04825 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IRJ34_10735 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D IRJ34_17535 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:pago00910]
D IRJ34_06695 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D IRJ34_06690 molybdopterin oxidoreductase family protein K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D IRJ34_06685 FAD-dependent oxidoreductase K00360 nasB; assimilatory nitrate reductase electron transfer subunit [EC:1.7.99.-]
D IRJ34_06650 nirB; (GenBank) nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D IRJ34_06655 nirD; (GenBank) nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D IRJ34_14180 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D IRJ34_13450 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D IRJ34_16335 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D IRJ34_08670 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_08715 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_09225 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IRJ34_09230 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IRJ34_06300 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D IRJ34_16825 bifunctional SulP family inorganic anion transporter/carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pago00920]
D IRJ34_15505 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D IRJ34_15495 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D IRJ34_15500 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D IRJ34_16905 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D IRJ34_20415 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D IRJ34_15515 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IRJ34_15520 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IRJ34_15525 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D IRJ34_15530 nitrite/sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D IRJ34_10130 FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D IRJ34_03750 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IRJ34_09050 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IRJ34_13160 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IRJ34_03145 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IRJ34_12145 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IRJ34_12140 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IRJ34_13165 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IRJ34_07045 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D IRJ34_03995 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D IRJ34_15180 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D IRJ34_18130 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D IRJ34_02575 sfnG; (GenBank) dimethyl sulfone monooxygenase SfnG K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pago00061]
D IRJ34_00250 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_06705 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_12245 acyl carrier protein K02078 acpP; acyl carrier protein
D IRJ34_12235 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IRJ34_12240 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D IRJ34_12250 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IRJ34_10715 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IRJ34_10820 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IRJ34_06410 AMP-dependent synthetase/ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D IRJ34_08445 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pago00071]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_08995 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_10805 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D IRJ34_02210 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_03410 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_04400 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_07515 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_15160 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_06410 AMP-dependent synthetase/ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D IRJ34_08445 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D IRJ34_13600 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D IRJ34_18735 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D IRJ34_09930 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D IRJ34_15360 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:pago00074]
D IRJ34_00250 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_06705 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_14520 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D IRJ34_12245 acyl carrier protein K02078 acpP; acyl carrier protein
D IRJ34_12235 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IRJ34_06770 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D IRJ34_06765 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pago00561]
D IRJ34_00330 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IRJ34_17375 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IRJ34_10270 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D IRJ34_13155 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D IRJ34_00785 dhaK; (GenBank) dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D IRJ34_00790 dhaL; (GenBank) dihydroxyacetone kinase subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D IRJ34_00795 dhaM; (GenBank) dihydroxyacetone kinase phosphoryl donor subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D IRJ34_11355 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D IRJ34_08265 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D IRJ34_08380 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IRJ34_08470 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IRJ34_10505 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IRJ34_12475 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IRJ34_13620 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D IRJ34_09485 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D IRJ34_16525 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:pago00564]
D IRJ34_12470 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D IRJ34_11365 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D IRJ34_14365 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D IRJ34_08380 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IRJ34_08470 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IRJ34_10505 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IRJ34_12475 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IRJ34_13620 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D IRJ34_03960 alkaline phosphatase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D IRJ34_15175 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D IRJ34_00315 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D IRJ34_01630 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D IRJ34_03955 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D IRJ34_07545 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D IRJ34_07955 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D IRJ34_18085 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D IRJ34_07170 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D IRJ34_03960 alkaline phosphatase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D IRJ34_15175 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:pago00600]
D IRJ34_08690 arylsulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1]
D IRJ34_02735 exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D IRJ34_17540 sialidase family protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D IRJ34_09485 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D IRJ34_16525 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D IRJ34_04205 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IRJ34_20260 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:pago00592]
D IRJ34_10805 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D IRJ34_08995 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:pago01040]
D IRJ34_09935 ferredoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D IRJ34_10805 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D IRJ34_14040 SGNH/GDSL hydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D IRJ34_12030 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D IRJ34_19945 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pago00230]
D IRJ34_00395 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IRJ34_06490 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D IRJ34_17465 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D IRJ34_16600 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D IRJ34_05770 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D IRJ34_02700 purL; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D IRJ34_02710 purS; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D IRJ34_02705 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D IRJ34_17470 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D IRJ34_06335 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D IRJ34_06330 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D IRJ34_16595 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D IRJ34_19385 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D IRJ34_05800 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IRJ34_03850 ExeM/NucH family extracellular endonuclease K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IRJ34_09700 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IRJ34_02360 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D IRJ34_06675 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IRJ34_08585 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D IRJ34_18050 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D IRJ34_00595 hpt; (GenBank) hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D IRJ34_14370 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IRJ34_14380 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IRJ34_11910 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D IRJ34_12865 rdgB; (GenBank) RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D IRJ34_14345 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IRJ34_16805 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IRJ34_07820 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D IRJ34_16680 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D IRJ34_11410 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D IRJ34_11745 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IRJ34_11740 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D IRJ34_07125 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D IRJ34_11565 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D IRJ34_06135 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D IRJ34_16370 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D IRJ34_00275 RelA/SpoT domain-containing protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D IRJ34_06790 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D IRJ34_02415 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D IRJ34_06110 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D IRJ34_05380 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D IRJ34_14670 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IRJ34_16845 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IRJ34_02920 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D IRJ34_11640 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D IRJ34_15515 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IRJ34_15520 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IRJ34_16705 pucL; (GenBank) urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
D IRJ34_17455 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D IRJ34_17450 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D IRJ34_16630 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D IRJ34_19800 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D IRJ34_17380 allB; (GenBank) allantoinase AllB K01466 allB; allantoinase [EC:3.5.2.5]
D IRJ34_16735 bifunctional allantoicase/(S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D IRJ34_00950 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D IRJ34_00945 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D IRJ34_00940 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:pago00240]
D IRJ34_11425 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D IRJ34_11430 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D IRJ34_11445 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D IRJ34_11440 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D IRJ34_11210 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D IRJ34_02345 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D IRJ34_11420 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D IRJ34_07535 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D IRJ34_11910 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D IRJ34_06710 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D IRJ34_08290 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D IRJ34_08375 cmk; (GenBank) (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D IRJ34_05700 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D IRJ34_03850 ExeM/NucH family extracellular endonuclease K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IRJ34_09700 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IRJ34_02360 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D IRJ34_18050 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D IRJ34_03625 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D IRJ34_11450 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D IRJ34_06090 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D IRJ34_05340 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D IRJ34_18235 dcd; (GenBank) dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D IRJ34_11745 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IRJ34_11740 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D IRJ34_03990 tmk; (GenBank) dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D IRJ34_17070 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D IRJ34_08920 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D IRJ34_06095 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D IRJ34_08900 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D IRJ34_14980 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D IRJ34_19805 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D IRJ34_18490 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D IRJ34_19120 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D IRJ34_00390 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pago00250]
D IRJ34_07825 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_14880 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_12735 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D IRJ34_14130 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IRJ34_17905 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IRJ34_17430 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D IRJ34_19230 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D IRJ34_09325 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D IRJ34_18880 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D IRJ34_20585 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D IRJ34_08205 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IRJ34_08210 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IRJ34_02415 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D IRJ34_19385 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D IRJ34_11445 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D IRJ34_19650 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D IRJ34_15390 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D IRJ34_06425 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IRJ34_19415 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IRJ34_09225 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IRJ34_09230 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IRJ34_13450 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D IRJ34_16335 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D IRJ34_02870 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D IRJ34_08670 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_08715 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_11425 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D IRJ34_11430 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D IRJ34_15435 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IRJ34_02705 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D IRJ34_14525 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IRJ34_17465 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pago00260]
D IRJ34_02800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IRJ34_14995 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IRJ34_09335 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IRJ34_13085 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IRJ34_20575 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IRJ34_13075 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D IRJ34_13080 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D IRJ34_09010 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D IRJ34_05935 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19005 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19760 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_17430 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D IRJ34_00330 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IRJ34_17375 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D IRJ34_04010 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D IRJ34_12600 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IRJ34_04825 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IRJ34_10735 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D IRJ34_06970 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D IRJ34_06965 tdh; (GenBank) L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D IRJ34_17935 primary-amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D IRJ34_04680 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IRJ34_19775 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IRJ34_04685 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IRJ34_19770 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_04690 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IRJ34_08410 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IRJ34_19765 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IRJ34_18990 aminopeptidase P family protein K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D IRJ34_02225 GMC family oxidoreductase N-terminal domain-containing protein K17755 codA; choline oxidase [EC:1.1.3.17]
D IRJ34_02230 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D IRJ34_03685 gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D IRJ34_15395 gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D IRJ34_02145 aromatic ring-hydroxylating dioxygenase subunit alpha K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D IRJ34_02150 ferredoxin reductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D IRJ34_02120 FAD-dependent oxidoreductase K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10]
D IRJ34_05815 FAD-dependent oxidoreductase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1]
D IRJ34_19020 sarcosine oxidase subunit alpha family protein K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D IRJ34_19010 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D IRJ34_19025 sarcosine oxidase subunit gamma family protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D IRJ34_19015 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D IRJ34_15185 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D IRJ34_18105 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D IRJ34_04695 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IRJ34_19030 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IRJ34_19755 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IRJ34_06215 ilvA; (GenBank) threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D IRJ34_18510 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D IRJ34_09215 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D IRJ34_09210 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D IRJ34_01185 aspartate aminotransferase family protein K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:pago00270]
D IRJ34_03145 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IRJ34_12145 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IRJ34_12140 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IRJ34_13165 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IRJ34_15185 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D IRJ34_18105 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D IRJ34_15510 mmuM; (GenBank) homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D IRJ34_20195 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D IRJ34_11395 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D IRJ34_08585 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D IRJ34_09690 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D IRJ34_06380 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D IRJ34_02800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IRJ34_14995 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IRJ34_09335 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IRJ34_13085 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IRJ34_20575 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IRJ34_13075 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D IRJ34_07045 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D IRJ34_03995 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D IRJ34_15180 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D IRJ34_02570 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D IRJ34_07040 bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D IRJ34_18130 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D IRJ34_12555 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IRJ34_07825 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_14880 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_03750 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IRJ34_09050 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IRJ34_13160 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IRJ34_04695 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IRJ34_19030 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IRJ34_19755 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IRJ34_12600 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IRJ34_04825 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pago00280]
D IRJ34_12555 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IRJ34_07615 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_12760 thiamine pyrophosphate-dependent enzyme K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_15720 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_19360 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_07620 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_12765 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_15715 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_19355 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_07625 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IRJ34_15710 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IRJ34_19350 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_07655 acyl-CoA dehydrogenase family protein K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_08995 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IRJ34_00250 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_06705 biotin carboxylase N-terminal domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D IRJ34_06770 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D IRJ34_06765 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit
D IRJ34_01110 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D IRJ34_02180 mmsB; (GenBank) 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D IRJ34_10230 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D IRJ34_02170 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D IRJ34_05035 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D IRJ34_18470 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IRJ34_15390 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D IRJ34_07650 biotin carboxylase N-terminal domain-containing protein K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D IRJ34_07645 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D IRJ34_20440 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D IRJ34_01985 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D IRJ34_07660 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D IRJ34_01980 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D IRJ34_07665 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pago00290]
D IRJ34_06215 ilvA; (GenBank) threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D IRJ34_18510 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D IRJ34_12490 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D IRJ34_12485 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D IRJ34_12560 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D IRJ34_05165 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IRJ34_12615 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IRJ34_12610 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IRJ34_12605 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D IRJ34_01550 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IRJ34_12620 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IRJ34_12555 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IRJ34_14130 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IRJ34_17905 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IRJ34_11240 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D IRJ34_17120 hypothetical protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pago00300]
D IRJ34_09335 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IRJ34_13085 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IRJ34_20575 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IRJ34_02800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IRJ34_14995 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IRJ34_03765 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IRJ34_07940 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IRJ34_09270 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IRJ34_07915 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D IRJ34_13985 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D IRJ34_08190 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D IRJ34_12430 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D IRJ34_13980 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D IRJ34_08000 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D IRJ34_13090 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D IRJ34_09620 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D IRJ34_19320 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D IRJ34_08540 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IRJ34_08545 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pago00310]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_02210 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_03410 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_04400 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_07515 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_15160 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_05920 FAD-dependent oxidoreductase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2]
D IRJ34_15390 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D IRJ34_06425 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IRJ34_19415 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pago00220]
D IRJ34_08195 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D IRJ34_08205 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IRJ34_08210 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IRJ34_00950 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D IRJ34_00945 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D IRJ34_00940 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D IRJ34_15435 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IRJ34_02705 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D IRJ34_08670 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_08715 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_11425 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D IRJ34_11430 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D IRJ34_13450 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D IRJ34_16335 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D IRJ34_07825 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_14880 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_14130 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IRJ34_17905 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IRJ34_00770 amino-acid N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D IRJ34_08180 argJ; (GenBank) bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D IRJ34_08185 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D IRJ34_08175 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D IRJ34_08190 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:pago00330]
D IRJ34_05340 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D IRJ34_18990 aminopeptidase P family protein K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D IRJ34_04450 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D IRJ34_04455 nitrilase-related carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D IRJ34_00195 NAD(P)/FAD-dependent oxidoreductase K03343 puo; putrescine oxidase [EC:1.4.3.10]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IRJ34_05160 speB; (GenBank) agmatinase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
D IRJ34_00415 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IRJ34_03925 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IRJ34_16360 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D IRJ34_02870 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D IRJ34_11875 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D IRJ34_11870 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D IRJ34_07825 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_14880 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pago00340]
D IRJ34_09170 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D IRJ34_09165 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D IRJ34_09185 hisI; (GenBank) phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D IRJ34_08050 priA; (GenBank) bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D IRJ34_08040 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D IRJ34_09175 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D IRJ34_08035 hisB; (GenBank) imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D IRJ34_08030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IRJ34_19365 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IRJ34_13250 hisN; (GenBank) histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D IRJ34_08635 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D IRJ34_01735 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D IRJ34_18110 aromatic amino acid ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D IRJ34_19085 aromatic amino acid lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D IRJ34_01730 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D IRJ34_19090 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D IRJ34_06990 hutI; (GenBank) imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D IRJ34_01760 hutG; (GenBank) formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D IRJ34_18835 arginase family protein K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:pago00350]
D IRJ34_07825 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_14880 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_08030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IRJ34_19365 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IRJ34_17935 primary-amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D IRJ34_09930 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D IRJ34_15360 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D IRJ34_19435 hpaE; (GenBank) 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D IRJ34_19445 fumarylacetoacetate hydrolase family protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D IRJ34_19425 hpaH; (GenBank) 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D IRJ34_19420 HpcH/HpaI aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D IRJ34_06425 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IRJ34_19415 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IRJ34_01520 cupin domain-containing protein K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
D IRJ34_01510 maleylpyruvate isomerase family mycothiol-dependent enzyme K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
D IRJ34_08215 maleylpyruvate isomerase family mycothiol-dependent enzyme K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
D IRJ34_09855 maleylpyruvate isomerase family mycothiol-dependent enzyme K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
D IRJ34_01515 fumarylacetoacetate hydrolase family protein K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
D IRJ34_19955 fumarylacetoacetate hydrolase family protein K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
C 00360 Phenylalanine metabolism [PATH:pago00360]
D IRJ34_17935 primary-amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D IRJ34_15970 paaK; (GenBank) phenylacetate--CoA ligase PaaK K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D IRJ34_15965 hotdog fold thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D IRJ34_15880 paaA; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit PaaA K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D IRJ34_15875 paaB; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D IRJ34_15870 paaC; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D IRJ34_15865 paaD; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit PaaD K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D IRJ34_15860 paaE; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit PaaE K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D IRJ34_15990 paaZ; (GenBank) phenylacetic acid degradation bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_05315 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IRJ34_16015 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IRJ34_07825 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_14880 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_08030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IRJ34_19365 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IRJ34_03125 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D IRJ34_00415 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IRJ34_03925 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IRJ34_10645 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D IRJ34_13600 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D IRJ34_18735 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:pago00380]
D IRJ34_10380 kynA; (GenBank) tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D IRJ34_10375 kynU; (GenBank) kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_02210 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_03410 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_04400 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_07515 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_15160 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IRJ34_00415 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IRJ34_03925 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IRJ34_09970 catalase K03781 katE; catalase [EC:1.11.1.6]
D IRJ34_15340 catalase K03781 katE; catalase [EC:1.11.1.6]
D IRJ34_03125 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pago00400]
D IRJ34_08475 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IRJ34_16190 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IRJ34_11475 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D IRJ34_16530 aroQ; (GenBank) type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D IRJ34_20020 TIM barrel protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D IRJ34_20025 shikimate dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]
D IRJ34_14420 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D IRJ34_11480 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D IRJ34_13240 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D IRJ34_11485 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D IRJ34_09190 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D IRJ34_11145 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D IRJ34_17555 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D IRJ34_08050 priA; (GenBank) bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D IRJ34_09205 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D IRJ34_09215 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D IRJ34_09210 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D IRJ34_13555 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D IRJ34_08370 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D IRJ34_00430 pheA; (GenBank) prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D IRJ34_17965 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D IRJ34_07825 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_14880 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_08030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IRJ34_19365 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pago00410]
D IRJ34_18450 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D IRJ34_19650 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D IRJ34_15390 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D IRJ34_18465 aspartate aminotransferase family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D IRJ34_17935 primary-amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IRJ34_00655 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D IRJ34_19805 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D IRJ34_18490 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D IRJ34_19120 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_10805 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D IRJ34_02170 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D IRJ34_05035 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D IRJ34_18470 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:pago00430]
D IRJ34_19650 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D IRJ34_17155 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D IRJ34_19230 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D IRJ34_18465 aspartate aminotransferase family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D IRJ34_13450 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pago00450]
D IRJ34_03995 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D IRJ34_15180 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D IRJ34_20195 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D IRJ34_06520 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D IRJ34_17975 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D IRJ34_20725 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D IRJ34_16660 molybdopterin cofactor-binding domain-containing protein K12528 xdhD; putative selenate reductase molybdopterin-binding subunit
D IRJ34_15515 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IRJ34_15520 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IRJ34_09560 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D IRJ34_09570 selA; (GenBank) L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D IRJ34_12585 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pago00460]
D IRJ34_02785 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D IRJ34_09420 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D IRJ34_14780 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D IRJ34_17155 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D IRJ34_05935 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19005 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19760 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pago00470]
D IRJ34_05910 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IRJ34_14460 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IRJ34_12465 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IRJ34_15435 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IRJ34_02705 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D IRJ34_12880 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D IRJ34_08555 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IRJ34_09840 enolase C-terminal domain-like protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D IRJ34_08000 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D IRJ34_13090 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D IRJ34_06985 FAD-dependent oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D IRJ34_05160 speB; (GenBank) agmatinase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
C 00480 Glutathione metabolism [PATH:pago00480]
D IRJ34_17155 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D IRJ34_00235 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D IRJ34_01615 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D IRJ34_01360 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D IRJ34_14435 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D IRJ34_18140 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D IRJ34_08795 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D IRJ34_10765 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D IRJ34_12000 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D IRJ34_05810 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D IRJ34_00015 gnd; (GenBank) decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D IRJ34_12155 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D IRJ34_10570 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D IRJ34_12355 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D IRJ34_02915 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pago00520]
D IRJ34_05785 murQ; (GenBank) N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D IRJ34_03755 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D IRJ34_06485 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D IRJ34_15740 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D IRJ34_12480 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IRJ34_18145 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IRJ34_15015 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IRJ34_13770 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D IRJ34_20235 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D IRJ34_04205 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IRJ34_20260 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IRJ34_12965 nagA; (GenBank) N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D IRJ34_14540 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D IRJ34_02420 nagB; (GenBank) glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D IRJ34_12915 nagB; (GenBank) glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D IRJ34_19845 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D IRJ34_14525 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IRJ34_00285 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IRJ34_01805 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IRJ34_03000 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IRJ34_09725 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IRJ34_10575 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IRJ34_06320 manA; (GenBank) mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IRJ34_09435 manA; (GenBank) mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D IRJ34_02970 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D IRJ34_03760 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_07005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_08450 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_08650 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D IRJ34_00395 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IRJ34_14320 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IRJ34_05710 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D IRJ34_06195 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IRJ34_06200 galT; (GenBank) galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D IRJ34_00525 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IRJ34_14005 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IRJ34_13405 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D IRJ34_03815 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IRJ34_06660 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D IRJ34_06045 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D IRJ34_10795 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D IRJ34_10930 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:pago00541]
D IRJ34_06485 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D IRJ34_13420 acyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D IRJ34_15740 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D IRJ34_15765 wecC; (GenBank) UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D IRJ34_00500 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D IRJ34_05280 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D IRJ34_00480 HAD-IIIA family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D IRJ34_00505 PfkB family carbohydrate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D IRJ34_00520 rfaE2; (GenBank) D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D IRJ34_14320 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IRJ34_05710 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D IRJ34_10930 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D IRJ34_10925 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D IRJ34_10920 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D IRJ34_06045 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:pago00515]
D IRJ34_06415 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:pago00514]
D IRJ34_06415 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pago00511]
D IRJ34_02735 exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D IRJ34_17540 sialidase family protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D IRJ34_04205 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IRJ34_20260 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IRJ34_04875 glycoside hydrolase family 38 C-terminal domain-containing protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D IRJ34_09450 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D IRJ34_18905 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:pago00542]
D IRJ34_13040 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:pago00550]
D IRJ34_12480 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IRJ34_18145 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IRJ34_15015 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IRJ34_08570 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D IRJ34_08555 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IRJ34_08540 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IRJ34_12465 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IRJ34_08545 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D IRJ34_11230 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D IRJ34_10940 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IRJ34_08550 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IRJ34_08565 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D IRJ34_00150 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D IRJ34_08560 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D IRJ34_08535 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D IRJ34_00145 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D IRJ34_00580 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D IRJ34_14535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D IRJ34_18250 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D IRJ34_11610 MurT ligase domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D IRJ34_11615 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D IRJ34_04710 peptidoglycan bridge formation glycyltransferase FemA/FemB family protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
C 00552 Teichoic acid biosynthesis [PATH:pago00552]
D IRJ34_10940 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IRJ34_13040 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D IRJ34_06325 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D IRJ34_13050
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:pago00572]
D IRJ34_13040 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D IRJ34_13045 glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D IRJ34_13400 glycosyltransferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
C 00543 Exopolysaccharide biosynthesis [PATH:pago00543]
D IRJ34_13040 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D IRJ34_03145 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IRJ34_12145 epsC; (GenBank) serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pago00730]
D IRJ34_12340 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D IRJ34_11895 thiD; (GenBank) bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D IRJ34_12725 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IRJ34_13605 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IRJ34_13860 thiO; (GenBank) glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D IRJ34_08965 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D IRJ34_13850 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D IRJ34_13865 thiE; (GenBank) thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D IRJ34_12455 thiL; (GenBank) thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D IRJ34_13245 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D IRJ34_14155 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D IRJ34_14670 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IRJ34_16845 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IRJ34_02195 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:pago00740]
D IRJ34_09155 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D IRJ34_09140 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D IRJ34_09150 ribB; (GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D IRJ34_09160 ribH; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D IRJ34_09145 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D IRJ34_07845 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D IRJ34_20415 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
C 00750 Vitamin B6 metabolism [PATH:pago00750]
D IRJ34_17645 pyridoxamine 5'-phosphate oxidase family protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D IRJ34_03310 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D IRJ34_04825 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IRJ34_13080 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D IRJ34_09345 pdxS; (GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D IRJ34_11630 pdxS; (GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D IRJ34_11605 pdxT; (GenBank) pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pago00760]
D IRJ34_12735 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D IRJ34_12740 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D IRJ34_12730 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D IRJ34_12895 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D IRJ34_06675 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IRJ34_03850 ExeM/NucH family extracellular endonuclease K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IRJ34_09700 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D IRJ34_02360 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D IRJ34_11860 nadD; (GenBank) nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D IRJ34_13725 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D IRJ34_02270 nadE; (GenBank) ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D IRJ34_07960 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D IRJ34_12900 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D IRJ34_08280 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D IRJ34_19830 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D IRJ34_19835 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D IRJ34_19825 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D IRJ34_19810 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D IRJ34_06425 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IRJ34_19415 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D IRJ34_16650 nucleotidyltransferase family protein K19190 nboR; nicotine blue oxidoreductase [EC:1.1.1.328]
C 00770 Pantothenate and CoA biosynthesis [PATH:pago00770]
D IRJ34_05165 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IRJ34_12615 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IRJ34_12610 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IRJ34_12605 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D IRJ34_01550 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IRJ34_12620 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IRJ34_08665 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D IRJ34_17115 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D IRJ34_00655 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D IRJ34_14530 coaA; (GenBank) type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D IRJ34_11400 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D IRJ34_12425 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D IRJ34_10445 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D IRJ34_14520 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D IRJ34_08150 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D IRJ34_12555 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IRJ34_19805 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D IRJ34_18490 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D IRJ34_19120 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D IRJ34_18450 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pago00780]
D IRJ34_12250 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IRJ34_10715 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IRJ34_10820 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IRJ34_05245 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D IRJ34_06780 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pago00785]
D IRJ34_08750 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D IRJ34_08745 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D IRJ34_19750 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D IRJ34_11700 lipoate--protein ligase family protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D IRJ34_10760 biotin/lipoate A/B protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_12225 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IRJ34_16640 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D IRJ34_08785 sucB; (GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D IRJ34_13205 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D IRJ34_07615 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_12760 thiamine pyrophosphate-dependent enzyme K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_15720 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_19360 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D IRJ34_07620 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_12765 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_15715 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_19355 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D IRJ34_07625 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IRJ34_15710 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IRJ34_19350 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D IRJ34_04680 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IRJ34_19775 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IRJ34_04685 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IRJ34_19770 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IRJ34_04690 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IRJ34_08410 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IRJ34_19765 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pago00790]
D IRJ34_00615 folE; (GenBank) GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D IRJ34_15885 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D IRJ34_17885 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D IRJ34_00625 folB; (GenBank) dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D IRJ34_00630 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D IRJ34_00620 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D IRJ34_14985 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D IRJ34_11920 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D IRJ34_09155 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D IRJ34_00130 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D IRJ34_18080 pabB; (GenBank) aminodeoxychorismate synthase component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D IRJ34_18090 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D IRJ34_03605 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D IRJ34_07875 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D IRJ34_07900 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D IRJ34_07910 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D IRJ34_02095 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D IRJ34_04860 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:pago00670]
D IRJ34_14985 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D IRJ34_14485 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D IRJ34_02110 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D IRJ34_05940 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D IRJ34_02115 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D IRJ34_05935 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19005 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19760 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_05770 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D IRJ34_05800 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IRJ34_04685 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IRJ34_19770 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IRJ34_14980 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D IRJ34_02125 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D IRJ34_05930 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D IRJ34_19035 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D IRJ34_14325 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D IRJ34_15510 mmuM; (GenBank) homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D IRJ34_11395 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D IRJ34_06380 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D IRJ34_02120 FAD-dependent oxidoreductase K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10]
D IRJ34_04680 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IRJ34_19775 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_04690 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IRJ34_08410 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IRJ34_19765 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D IRJ34_02225 GMC family oxidoreductase N-terminal domain-containing protein K17755 codA; choline oxidase [EC:1.1.3.17]
D IRJ34_02230 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D IRJ34_03685 gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D IRJ34_15395 gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D IRJ34_15185 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D IRJ34_18105 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pago00860]
D IRJ34_12530 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IRJ34_18945 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IRJ34_13820 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D IRJ34_13775 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D IRJ34_13785 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D IRJ34_13795 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D IRJ34_06640 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D IRJ34_13790 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D IRJ34_13815 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D IRJ34_13810 hemG; (GenBank) protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D IRJ34_13800 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D IRJ34_15425 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D IRJ34_06645 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D IRJ34_10590 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D IRJ34_10615 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D IRJ34_14230 ferritin K22336 bfrB; bacterioferritin B [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pago00130]
D IRJ34_15565 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D IRJ34_15570 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D IRJ34_15590 menD; (GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D IRJ34_15600 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D IRJ34_16070 AMP-binding protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D IRJ34_16065 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D IRJ34_16075 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D IRJ34_09510 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D IRJ34_01710 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pago00900]
D IRJ34_08965 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D IRJ34_07725 dxr; (GenBank) 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D IRJ34_04040 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D IRJ34_06460 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D IRJ34_04045 ispF; (GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D IRJ34_07740 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D IRJ34_14105 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_01475 idi; (GenBank) isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D IRJ34_01470 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D IRJ34_08495 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D IRJ34_06255 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D IRJ34_11230 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:pago00907]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_06775 NAD(P)-dependent oxidoreductase K13775 atuG; citronellol/citronellal dehydrogenase
D IRJ34_20440 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D IRJ34_08995 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D IRJ34_03095 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IRJ34_10585 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pago00523]
D IRJ34_10930 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D IRJ34_10925 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D IRJ34_10920 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D IRJ34_15570 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D IRJ34_10925 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pago00946]
D IRJ34_02785 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D IRJ34_09420 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D IRJ34_14780 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D IRJ34_09415 family 78 glycoside hydrolase catalytic domain K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
D IRJ34_16705 pucL; (GenBank) urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:pago00311]
D IRJ34_16195 acetylxylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D IRJ34_04280 C45 family peptidase K19200 IAL; isopenicillin-N N-acyltransferase like protein
D IRJ34_18155 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:pago00332]
D IRJ34_11875 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D IRJ34_11870 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pago00261]
D IRJ34_15515 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D IRJ34_15520 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D IRJ34_02800 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IRJ34_14995 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IRJ34_03765 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IRJ34_07940 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IRJ34_09270 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IRJ34_07915 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pago00521]
D IRJ34_03760 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_07005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_08450 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_00395 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IRJ34_14490 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D IRJ34_04940 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D IRJ34_06855 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D IRJ34_01570 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D IRJ34_05045 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D IRJ34_05100 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D IRJ34_10930 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D IRJ34_10925 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D IRJ34_10920 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D IRJ34_03760 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_07005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IRJ34_08450 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pago00525]
D IRJ34_10930 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D IRJ34_10925 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pago00401]
D IRJ34_08370 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D IRJ34_07825 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_14880 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_08030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IRJ34_19365 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D IRJ34_09190 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D IRJ34_12235 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IRJ34_10715 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IRJ34_10820 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D IRJ34_12245 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pago00999]
D IRJ34_11395 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D IRJ34_14420 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D IRJ34_02785 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D IRJ34_09420 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D IRJ34_14780 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D IRJ34_08495 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pago00362]
D IRJ34_09810 benA; (GenBank) benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D IRJ34_09815 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D IRJ34_09820 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D IRJ34_09825 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D IRJ34_09805 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D IRJ34_09835 catC; (GenBank) muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D IRJ34_20000 alpha/beta fold hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D IRJ34_19985 3-oxoacid CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D IRJ34_19980 3-oxoacid CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D IRJ34_08995 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IRJ34_12330 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D IRJ34_20010 pcaG; (GenBank) protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D IRJ34_20015 pcaH; (GenBank) protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D IRJ34_20005 lyase family protein K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D IRJ34_09960 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D IRJ34_19995 pcaC; (GenBank) 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D IRJ34_18740 cytochrome P450 K27672 chcAa; cyclohexane-1-carboxylate 4-trans-hydroxylase [EC:1.14.15.40]
D IRJ34_13600 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D IRJ34_18735 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D IRJ34_18730 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D IRJ34_10355 FAD-dependent oxidoreductase K27500 chcC1; 4-oxocyclohexanecarboxylate 2-dehydrogenase [EC:1.17.3.5]
D IRJ34_19665 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D IRJ34_01535 FAD-dependent oxidoreductase K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24]
D IRJ34_02210 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_03410 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_04400 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_07515 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_15160 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_05315 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IRJ34_16015 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pago00627]
D IRJ34_00415 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IRJ34_03925 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IRJ34_05390 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D IRJ34_09775 FAD-binding monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D IRJ34_10240 FAD-binding monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D IRJ34_19940 AMP-binding protein K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D IRJ34_19935 bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:pago00364]
D IRJ34_09810 benA; (GenBank) benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D IRJ34_09815 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D IRJ34_09820 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D IRJ34_09825 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D IRJ34_09805 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D IRJ34_16035 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:pago00625]
D IRJ34_09930 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D IRJ34_15360 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D IRJ34_10225 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IRJ34_02100 fdhA; (GenBank) formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D IRJ34_10095 glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D IRJ34_03185 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pago00361]
D IRJ34_09805 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D IRJ34_16035 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D IRJ34_12330 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation [PATH:pago00623]
D IRJ34_09775 FAD-binding monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D IRJ34_10240 FAD-binding monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D IRJ34_09805 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D IRJ34_16035 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:pago00622]
D IRJ34_09810 benA; (GenBank) benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D IRJ34_09815 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D IRJ34_09820 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D IRJ34_09825 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D IRJ34_12330 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation [PATH:pago00633]
D IRJ34_05290 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D IRJ34_08995 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:pago00643]
D IRJ34_00415 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IRJ34_03925 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D IRJ34_12330 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
D IRJ34_00950 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D IRJ34_00945 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D IRJ34_00940 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:pago00930]
D IRJ34_02460 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D IRJ34_16295 aldehyde dehydrogenase (NADP(+)) K14519 aldH; NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
D IRJ34_02185 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D IRJ34_19580 serine hydrolase K01453 nylB; 6-aminohexanoate-oligomer exohydrolase [EC:3.5.1.46]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pago00626]
D IRJ34_09930 NAD(P)-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D IRJ34_15360 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D IRJ34_20010 pcaG; (GenBank) protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D IRJ34_20015 pcaH; (GenBank) protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:pago00984]
D IRJ34_06605 GMC oxidoreductase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D IRJ34_08995 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pago03020]
D IRJ34_14820 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IRJ34_14815 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IRJ34_14620 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IRJ34_11405 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D IRJ34_04795 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pago03010]
D IRJ34_00665 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_00690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_04105 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_08240 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_18615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_18640 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_00670 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_00695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_04110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_08245 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_18610 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_18635 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_10435 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D IRJ34_07525 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D IRJ34_14740 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D IRJ34_11520 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D IRJ34_14690 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D IRJ34_20510 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D IRJ34_14805 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D IRJ34_14705 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D IRJ34_14545 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D IRJ34_14775 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D IRJ34_14625 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D IRJ34_14810 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D IRJ34_14630 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D IRJ34_18645 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D IRJ34_07850 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D IRJ34_12320 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D IRJ34_14725 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D IRJ34_20500 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D IRJ34_14750 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D IRJ34_11320 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D IRJ34_14855 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D IRJ34_14755 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D IRJ34_14770 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D IRJ34_14765 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D IRJ34_14710 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D IRJ34_14700 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D IRJ34_20495 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D IRJ34_14840 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D IRJ34_14860 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D IRJ34_14835 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D IRJ34_14550 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D IRJ34_14720 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D IRJ34_14680 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D IRJ34_14735 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D IRJ34_14615 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D IRJ34_14695 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D IRJ34_12300 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D IRJ34_08080 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D IRJ34_11890 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D IRJ34_14745 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D IRJ34_14760 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D IRJ34_14715 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D IRJ34_06495 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D IRJ34_11885 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D IRJ34_18655 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D IRJ34_14730 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D IRJ34_14685 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D IRJ34_10755 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D IRJ34_12415 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D IRJ34_18650 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D IRJ34_20770 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D IRJ34_08075 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D IRJ34_14425 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D IRJ34_14635 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pago00970]
D IRJ34_00055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IRJ34_11835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IRJ34_11845 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IRJ34_14300 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IRJ34_03795 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IRJ34_04925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IRJ34_12055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IRJ34_13115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IRJ34_07135 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IRJ34_01820 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IRJ34_01750 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IRJ34_09095 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IRJ34_06480 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IRJ34_12520 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IRJ34_01815 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IRJ34_12515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IRJ34_09075 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IRJ34_09085 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IRJ34_09100 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IRJ34_11980 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IRJ34_18310 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IRJ34_12085 tRNA-His K14226 tRNA-His; tRNA His
D IRJ34_00045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IRJ34_00170 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_06155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_09250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_10835 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_12660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_20520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_00910 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IRJ34_12640 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IRJ34_12645 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IRJ34_07185 tRNA-Ile K14230 tRNA-Met; tRNA Met
D IRJ34_13690 tRNA-Met K14230 tRNA-Met; tRNA Met
D IRJ34_13695 tRNA-Met K14230 tRNA-Met; tRNA Met
D IRJ34_15110 tRNA-Met K14230 tRNA-Met; tRNA Met
D IRJ34_01825 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IRJ34_08390 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IRJ34_11975 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IRJ34_16580 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IRJ34_02860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IRJ34_03595 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IRJ34_03830 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IRJ34_03865 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IRJ34_03970 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IRJ34_04235 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IRJ34_15115 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IRJ34_14875 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D IRJ34_15290 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IRJ34_09080 tRNA-Val K14237 tRNA-Val; tRNA Val
D IRJ34_09090 tRNA-Val K14237 tRNA-Val; tRNA Val
D IRJ34_09105 tRNA-Val K14237 tRNA-Val; tRNA Val
D IRJ34_12205 tRNA-Val K14237 tRNA-Val; tRNA Val
D IRJ34_09565 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D IRJ34_12530 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IRJ34_18945 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IRJ34_06915 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D IRJ34_06920 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D IRJ34_06910 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D IRJ34_09340 metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IRJ34_11505 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IRJ34_11540 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IRJ34_07080 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IRJ34_11645 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IRJ34_00445 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IRJ34_09570 selA; (GenBank) L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D IRJ34_04055 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IRJ34_12585 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IRJ34_09120 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D IRJ34_11940 valS; (GenBank) valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IRJ34_11350 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IRJ34_11925 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IRJ34_00735 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IRJ34_13095 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IRJ34_07770 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IRJ34_11545 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IRJ34_01430 hypothetical protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IRJ34_08125 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IRJ34_08130 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IRJ34_08235 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IRJ34_05985 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:pago03008]
D IRJ34_12410 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IRJ34_12080 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pago03060]
D IRJ34_14675 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IRJ34_14870 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IRJ34_10550 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IRJ34_11575 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IRJ34_11570 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IRJ34_11580 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IRJ34_20755 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IRJ34_13485 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IRJ34_12350 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IRJ34_12375 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IRJ34_11020 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D IRJ34_13920 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D IRJ34_11025 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D IRJ34_12290 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D IRJ34_12295 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D IRJ34_08610 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D IRJ34_02400 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D IRJ34_19685 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum [PATH:pago04141]
D IRJ34_18915 GNAT family N-acetyltransferase K13525 VCP; transitional endoplasmic reticulum ATPase
D IRJ34_05740 HSP20 family small heat-shock protein K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pago04122]
D IRJ34_12725 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IRJ34_13605 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IRJ34_03750 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IRJ34_09050 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IRJ34_13160 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D IRJ34_13595 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D IRJ34_07910 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D IRJ34_07875 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D IRJ34_07870 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D IRJ34_20070 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D IRJ34_13830 moeB; (GenBank) molybdopterin-synthase adenylyltransferase MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D IRJ34_07900 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D IRJ34_13855 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome [PATH:pago03050]
D IRJ34_10970 arc; (GenBank) proteasome ATPase K13527 mpa; proteasome-associated ATPase
D IRJ34_10990 prcA; (GenBank) proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D IRJ34_10985 prcB; (GenBank) proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:pago03018]
D IRJ34_11900 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D IRJ34_06120 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IRJ34_07855 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D IRJ34_15125 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IRJ34_03820 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IRJ34_04350 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IRJ34_13070 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D IRJ34_07945 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D IRJ34_17815 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D IRJ34_04745 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IRJ34_14400 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IRJ34_14965 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D IRJ34_20225 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D IRJ34_20705 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pago03030]
D IRJ34_12855 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IRJ34_13750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IRJ34_08620 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IRJ34_02845 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IRJ34_03985 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IRJ34_11325 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IRJ34_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IRJ34_20395 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D IRJ34_07130 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D IRJ34_07420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_12060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_20505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_04750 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D IRJ34_12285 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D IRJ34_10420 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IRJ34_06850 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pago03410]
D IRJ34_16470 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D IRJ34_04725 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D IRJ34_00835 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D IRJ34_08225 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D IRJ34_11945 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D IRJ34_12405 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D IRJ34_03520 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D IRJ34_11985 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D IRJ34_08220 AlkA N-terminal domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D IRJ34_00090 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D IRJ34_01945 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D IRJ34_05980 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D IRJ34_10420 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IRJ34_06850 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pago03420]
D IRJ34_06550 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D IRJ34_10160 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D IRJ34_10495 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D IRJ34_10450 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D IRJ34_10510 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D IRJ34_04995 pcrA; (GenBank) DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IRJ34_13720 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IRJ34_13735 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IRJ34_10420 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IRJ34_06850 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IRJ34_04795 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:pago03430]
D IRJ34_04995 pcrA; (GenBank) DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IRJ34_13720 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IRJ34_13735 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IRJ34_14115 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D IRJ34_14120 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D IRJ34_07420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_12060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_20505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_08620 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IRJ34_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IRJ34_02845 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IRJ34_11325 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IRJ34_03985 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IRJ34_12855 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IRJ34_13750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IRJ34_06850 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:pago03440]
D IRJ34_07420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_12060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_20505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_00020 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D IRJ34_11235 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D IRJ34_02840 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D IRJ34_07980 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D IRJ34_10420 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IRJ34_11590 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D IRJ34_11585 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D IRJ34_11595 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D IRJ34_12445 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D IRJ34_08620 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IRJ34_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IRJ34_02845 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IRJ34_11325 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IRJ34_03985 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IRJ34_12855 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IRJ34_13750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IRJ34_11390 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:pago03450]
D IRJ34_01275 Ku protein K10979 ku; DNA end-binding protein Ku
D IRJ34_01270 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D IRJ34_10145 ligD; (GenBank) non-homologous end-joining DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pago03250]
D IRJ34_00075 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pago02010]
D IRJ34_15505 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D IRJ34_15495 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D IRJ34_15500 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D IRJ34_17520 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D IRJ34_17515 ABC transporter permease K02018 modB; molybdate transport system permease protein
D IRJ34_17510 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D IRJ34_03395 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D IRJ34_03390 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D IRJ34_03385 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D IRJ34_14135 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D IRJ34_19095 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D IRJ34_14140 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D IRJ34_14145 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D IRJ34_19100 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D IRJ34_19105 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D IRJ34_14150 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D IRJ34_19110 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D IRJ34_04210 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IRJ34_01855 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D IRJ34_04335 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D IRJ34_07710 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D IRJ34_15090 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D IRJ34_01860 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_04330 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_07705 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_15085 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_01865 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_04325 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_07700 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_15080 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_01920 extracellular solute-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D IRJ34_01925 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D IRJ34_01930 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D IRJ34_06945 sugar ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D IRJ34_16220 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D IRJ34_06935 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D IRJ34_16215 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D IRJ34_06940 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D IRJ34_16210 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D IRJ34_17320 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D IRJ34_17315 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D IRJ34_17310 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D IRJ34_02605 ngcE; (GenBank) N-acetylglucosamine/diacetylchitobiose ABC transporter substrate-binding protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D IRJ34_02610 sugar ABC transporter permease K10201 ngcF; N-acetylglucosamine transport system permease protein
D IRJ34_02615 carbohydrate ABC transporter permease K10202 ngcG; N-acetylglucosamine transport system permease protein
D IRJ34_20275 extracellular solute-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D IRJ34_20270 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D IRJ34_20265 carbohydrate ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D IRJ34_02325 chvE; (GenBank) multiple monosaccharide ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D IRJ34_05855 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D IRJ34_02335 mmsB; (GenBank) multiple monosaccharide ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D IRJ34_05860 mmsB; (GenBank) multiple monosaccharide ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D IRJ34_02330 mmsA; (GenBank) multiple monosaccharide ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IRJ34_05865 mmsA; (GenBank) multiple monosaccharide ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IRJ34_06070 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D IRJ34_09680 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D IRJ34_06080 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D IRJ34_09670 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D IRJ34_06085 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D IRJ34_09665 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D IRJ34_06075 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D IRJ34_09675 ATP-binding cassette domain-containing protein K23537 nupA; general nucleoside transport system ATP-binding protein
D IRJ34_10070 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D IRJ34_10060 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D IRJ34_10065 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D IRJ34_10725 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D IRJ34_14660 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D IRJ34_14650 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D IRJ34_14655 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D IRJ34_00870 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D IRJ34_00875 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D IRJ34_00880 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D IRJ34_00885 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D IRJ34_13965 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D IRJ34_13970 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D IRJ34_13975 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D IRJ34_13960 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D IRJ34_04890 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D IRJ34_04885 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D IRJ34_04880 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D IRJ34_06160 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D IRJ34_06180 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D IRJ34_06175 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D IRJ34_06170 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D IRJ34_06165 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D IRJ34_16920 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D IRJ34_16910 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D IRJ34_16915 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D IRJ34_14060 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D IRJ34_14055 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D IRJ34_14050 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D IRJ34_14045 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D IRJ34_03710 ABC transporter permease K12370 dppC; dipeptide transport system permease protein
D IRJ34_19265 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D IRJ34_19280 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D IRJ34_19275 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D IRJ34_19270 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D IRJ34_18720 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D IRJ34_18715 iron chelate uptake ABC transporter family permease subunit K23186 fepD; iron-siderophore transport system permease protein
D IRJ34_18710 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D IRJ34_18705 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D IRJ34_10685 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D IRJ34_10675 energy-coupling factor transporter transmembrane component T K16783 bioN; biotin transport system permease protein
D IRJ34_10680 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D IRJ34_18165 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D IRJ34_15780 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein
D IRJ34_15775 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D IRJ34_05965 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D IRJ34_05970 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D IRJ34_05960 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D IRJ34_20665 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D IRJ34_20670 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D IRJ34_13300 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D IRJ34_13305 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D IRJ34_05180 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D IRJ34_17000 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D IRJ34_05185 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D IRJ34_16995 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D IRJ34_08860 cydD; (GenBank) thiol reductant ABC exporter subunit CydD K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D IRJ34_10610 ATP-binding cassette domain-containing protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D IRJ34_16045 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:pago02060]
D IRJ34_19190 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D IRJ34_01325 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D IRJ34_11175 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D IRJ34_19195 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D IRJ34_19180 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D IRJ34_01330 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D IRJ34_14360 PTS sugar transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D IRJ34_01335 hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:pago03070]
D IRJ34_11575 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IRJ34_11570 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IRJ34_14870 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IRJ34_10550 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IRJ34_14675 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IRJ34_11580 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IRJ34_20755 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IRJ34_13485 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IRJ34_12375 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IRJ34_12350 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IRJ34_11020 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D IRJ34_13920 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D IRJ34_11025 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pago02020]
D IRJ34_05225 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IRJ34_10025 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IRJ34_15885 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D IRJ34_17885 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D IRJ34_04020 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D IRJ34_04025 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D IRJ34_00870 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D IRJ34_04505 flagellin K02406 fliC; flagellin
D IRJ34_04665 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D IRJ34_04600 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D IRJ34_15140 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D IRJ34_15135 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D IRJ34_03040 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D IRJ34_03045 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D IRJ34_03050 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D IRJ34_10615 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D IRJ34_15940 ATP-binding protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D IRJ34_06670 glycoside hydrolase family 68 protein K00692 sacB; levansucrase [EC:2.4.1.10]
D IRJ34_13670 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D IRJ34_13510 mtrB; (GenBank) MtrAB system histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D IRJ34_13515 mtrA; (GenBank) MtrAB system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D IRJ34_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D IRJ34_14535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D IRJ34_18250 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D IRJ34_07675 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D IRJ34_15045 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D IRJ34_16720 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D IRJ34_19045 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D IRJ34_04655 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D IRJ34_07110 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D IRJ34_17655 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D IRJ34_07115 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D IRJ34_17660 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D IRJ34_13330 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D IRJ34_14560 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D IRJ34_14565 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D IRJ34_14570 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D IRJ34_13345 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IRJ34_14575 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IRJ34_16445 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IRJ34_13340 type II secretion system F family protein K12510 tadB; tight adherence protein B
D IRJ34_14580 type II secretion system F family protein K12510 tadB; tight adherence protein B
D IRJ34_16440 hypothetical protein K12510 tadB; tight adherence protein B
D IRJ34_13335 type II secretion system F family protein K12511 tadC; tight adherence protein C
D IRJ34_14585 type II secretion system F family protein K12511 tadC; tight adherence protein C
D IRJ34_16435 type II secretion system F family protein K12511 tadC; tight adherence protein C
D IRJ34_12360 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D IRJ34_08670 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_08715 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_08345 cation:dicarboxylase symporter family transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D IRJ34_16620 cation:dicarboxylase symporter family transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D IRJ34_16540 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IRJ34_15435 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D IRJ34_08850 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D IRJ34_08855 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D IRJ34_18075 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D IRJ34_15740 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D IRJ34_15765 wecC; (GenBank) UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome [PATH:pago04142]
D IRJ34_18905 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D IRJ34_04205 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IRJ34_20260 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IRJ34_09450 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D IRJ34_02735 exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D IRJ34_17540 sialidase family protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D IRJ34_06930 formylglycine-generating enzyme family protein K13444 SUMF1; formylglycine-generating enzyme [EC:1.8.3.7]
C 04146 Peroxisome [PATH:pago04146]
D IRJ34_10805 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D IRJ34_06410 AMP-dependent synthetase/ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D IRJ34_08445 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D IRJ34_13725 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D IRJ34_17430 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D IRJ34_05810 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D IRJ34_20440 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D IRJ34_09970 catalase K03781 katE; catalase [EC:1.11.1.6]
D IRJ34_15340 catalase K03781 katE; catalase [EC:1.11.1.6]
D IRJ34_10530 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pago02024]
D IRJ34_09190 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D IRJ34_08475 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IRJ34_16190 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IRJ34_15135 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D IRJ34_19650 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D IRJ34_06160 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D IRJ34_06180 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D IRJ34_06175 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D IRJ34_06170 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D IRJ34_06165 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D IRJ34_10100 MBL fold metallo-hydrolase K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D IRJ34_06410 AMP-dependent synthetase/ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D IRJ34_08445 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D IRJ34_16540 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IRJ34_09500 glycosyl hydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D IRJ34_09155 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D IRJ34_09140 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D IRJ34_07075 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D IRJ34_14060 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D IRJ34_14055 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D IRJ34_14050 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D IRJ34_14045 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D IRJ34_03700 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_04180 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_04245 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_09475 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_09640 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_09760 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_12665 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_13580 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_03705 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_03780 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_04170 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_04265 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_09470 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_09635 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_09755 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_13575 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_03775 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_04185 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IRJ34_04260 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IRJ34_09465 ABC transporter permease K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_09630 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IRJ34_09750 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IRJ34_13570 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IRJ34_03715 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_04165 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_04255 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_09460 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_09625 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_09745 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_13565 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_03770 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IRJ34_04160 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IRJ34_09455 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IRJ34_09740 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IRJ34_20755 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IRJ34_08135 serine protease K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D IRJ34_15665 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D IRJ34_15670 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D IRJ34_14870 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IRJ34_10550 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IRJ34_14675 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IRJ34_11580 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IRJ34_13485 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IRJ34_12375 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IRJ34_12350 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IRJ34_03960 alkaline phosphatase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D IRJ34_15175 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D IRJ34_03785
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pago02030]
D IRJ34_10070 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D IRJ34_04555 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D IRJ34_10030 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D IRJ34_04610 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D IRJ34_04615 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D IRJ34_04600 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D IRJ34_04605 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pago02040]
D IRJ34_04545 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D IRJ34_04550 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D IRJ34_04555 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D IRJ34_10030 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D IRJ34_04560 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D IRJ34_04565 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D IRJ34_04570 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ
D IRJ34_04580 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D IRJ34_04610 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D IRJ34_04615 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D IRJ34_04620 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D IRJ34_04625 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D IRJ34_04630 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D IRJ34_04635 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D IRJ34_04645 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D IRJ34_04640 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D IRJ34_04535 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D IRJ34_04540 flagellar basal body rod C-terminal domain-containing protein K02388 flgC; flagellar basal-body rod protein FlgC
D IRJ34_04585 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D IRJ34_04590 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D IRJ34_04495 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D IRJ34_04490 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D IRJ34_04505 flagellin K02406 fliC; flagellin
D IRJ34_04510 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D IRJ34_04515 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D IRJ34_04600 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D IRJ34_04605 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D IRJ34_04890 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D IRJ34_08815 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D IRJ34_04665 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D IRJ34_06120 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:pago04981]
D IRJ34_14325 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D IRJ34_14985 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D IRJ34_05935 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19005 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_19760 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IRJ34_14980 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D IRJ34_15510 mmuM; (GenBank) homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D IRJ34_01735 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D IRJ34_18110 aromatic amino acid ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D IRJ34_19085 aromatic amino acid lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pago01501]
D IRJ34_13770 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D IRJ34_20235 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D IRJ34_14060 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D IRJ34_14055 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D IRJ34_14050 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D IRJ34_14045 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D IRJ34_08840 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D IRJ34_08845 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IRJ34_08535 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pago01502]
D IRJ34_12465 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IRJ34_05910 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IRJ34_14460 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IRJ34_08545 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D IRJ34_08550 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IRJ34_08565 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D IRJ34_14535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D IRJ34_18250 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D IRJ34_00075 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pago01000]
C 01001 Protein kinases [BR:pago01001]
D IRJ34_00135 pknB; (GenBank) Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D IRJ34_00140 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D IRJ34_08480 pknB; (GenBank) Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D IRJ34_19565 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D IRJ34_19710 serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D IRJ34_17410 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D IRJ34_03550 serine/threonine-protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D IRJ34_05225 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IRJ34_10025 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IRJ34_04020 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D IRJ34_15140 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D IRJ34_15940 ATP-binding protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D IRJ34_13510 mtrB; (GenBank) MtrAB system histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D IRJ34_03655 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D IRJ34_04760 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D IRJ34_07110 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D IRJ34_17655 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D IRJ34_03055 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D IRJ34_06885 ATP-binding protein K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D IRJ34_07575 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D IRJ34_13445 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pago01009]
D IRJ34_06380 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D IRJ34_00155 PP2C family serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D IRJ34_06820 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D IRJ34_10735 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pago01002]
D IRJ34_08610 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D IRJ34_08110 pcp; (GenBank) pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D IRJ34_14345 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IRJ34_16805 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IRJ34_01775 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D IRJ34_04840 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D IRJ34_04845 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D IRJ34_17465 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D IRJ34_09225 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IRJ34_14525 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IRJ34_04280 C45 family peptidase K19200 IAL; isopenicillin-N N-acyltransferase like protein
D IRJ34_00370 type 1 glutamine amidotransferase domain-containing protein K05520 yhbO; deglycase [EC:3.5.1.124]
D IRJ34_07030 CPBP family intramembrane glutamic endopeptidase K07052 K07052; CAAX protease family protein
D IRJ34_16060 type II CAAX endopeptidase family protein K07052 K07052; CAAX protease family protein
D IRJ34_19850 CPBP family intramembrane glutamic endopeptidase K07052 K07052; CAAX protease family protein
D IRJ34_10765 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D IRJ34_12000 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D IRJ34_11625 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D IRJ34_11245 M13-type metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D IRJ34_14535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D IRJ34_18250 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D IRJ34_08795 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D IRJ34_03120 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D IRJ34_17770 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D IRJ34_13980 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D IRJ34_04460 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D IRJ34_08655 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D IRJ34_14665 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D IRJ34_13895 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D IRJ34_00610 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IRJ34_15320 htpX; (GenBank) zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D IRJ34_14285 hypothetical protein K16922 yydH; putative peptide zinc metalloprotease protein
D IRJ34_08840 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D IRJ34_04310 TasA family protein K06336 tasA; spore coat-associated protein N
D IRJ34_14600 TasA family protein K06336 tasA; spore coat-associated protein N
D IRJ34_19690 TasA family protein K06336 tasA; spore coat-associated protein N
D IRJ34_11455 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D IRJ34_08135 serine protease K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D IRJ34_13670 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D IRJ34_15665 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D IRJ34_15670 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D IRJ34_03835 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D IRJ34_15925 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D IRJ34_00580 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D IRJ34_11960 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D IRJ34_11965 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D IRJ34_05590 brxL; (GenBank) BREX system Lon protease-like protein BrxL K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D IRJ34_13705 S16 family serine protease K07177 K07177; Lon-like protease
D IRJ34_08020 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D IRJ34_06620 umuD; (GenBank) translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D IRJ34_12290 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D IRJ34_12295 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D IRJ34_02400 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D IRJ34_19685 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D IRJ34_08765 PDZ domain-containing protein K08676 tri; tricorn protease [EC:3.4.21.-]
D IRJ34_18155 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D IRJ34_07360 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D IRJ34_10990 prcA; (GenBank) proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D IRJ34_10985 prcB; (GenBank) proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D IRJ34_17155 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 01003 Glycosyltransferases [BR:pago01003]
D IRJ34_11040 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D IRJ34_20165 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D IRJ34_06415 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D IRJ34_05715 glycosyltransferase family 1 protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D IRJ34_10800 glgA; (GenBank) glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D IRJ34_00150 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D IRJ34_08560 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D IRJ34_13040 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D IRJ34_06670 glycoside hydrolase family 68 protein K00692 sacB; levansucrase [EC:2.4.1.10]
D IRJ34_01500 mptB; (GenBank) polyprenol phosphomannose-dependent alpha 1,6 mannosyltransferase MptB K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D IRJ34_12075 mptB; (GenBank) polyprenol phosphomannose-dependent alpha 1,6 mannosyltransferase MptB K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D IRJ34_13045 glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D IRJ34_13400 glycosyltransferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D IRJ34_00755 glycosyltransferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
D IRJ34_04220 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pago01005]
D IRJ34_00500 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D IRJ34_05280 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D IRJ34_00480 HAD-IIIA family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D IRJ34_00505 PfkB family carbohydrate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D IRJ34_00520 rfaE2; (GenBank) D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D IRJ34_13040 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pago01011]
D IRJ34_12480 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IRJ34_18145 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IRJ34_15015 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IRJ34_08570 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D IRJ34_08555 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IRJ34_08540 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IRJ34_12465 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IRJ34_04710 peptidoglycan bridge formation glycyltransferase FemA/FemB family protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D IRJ34_05910 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IRJ34_14460 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IRJ34_12880 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D IRJ34_08550 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IRJ34_08565 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D IRJ34_10940 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IRJ34_20715 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D IRJ34_08535 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D IRJ34_00145 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D IRJ34_00580 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D IRJ34_00150 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D IRJ34_08560 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D IRJ34_14535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D IRJ34_18250 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D IRJ34_01775 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D IRJ34_04840 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D IRJ34_04845 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D IRJ34_11495 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:pago01004]
D IRJ34_12235 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IRJ34_12240 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D IRJ34_12250 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IRJ34_10715 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IRJ34_10820 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IRJ34_14040 SGNH/GDSL hydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D IRJ34_12030 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D IRJ34_19945 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D IRJ34_02205 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_02580 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_16480 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_17250 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D IRJ34_06410 AMP-dependent synthetase/ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D IRJ34_08445 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D IRJ34_15200 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D IRJ34_08380 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IRJ34_08470 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IRJ34_10505 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IRJ34_12475 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:pago01006]
D IRJ34_08495 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D IRJ34_01470 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D IRJ34_06255 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D IRJ34_11230 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D IRJ34_07995 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D IRJ34_16075 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D IRJ34_10590 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pago01007]
D IRJ34_12530 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IRJ34_18945 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IRJ34_08235 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IRJ34_05985 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D IRJ34_04055 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IRJ34_13095 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IRJ34_12585 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IRJ34_11925 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IRJ34_11940 valS; (GenBank) valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IRJ34_11350 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IRJ34_00735 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IRJ34_11540 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IRJ34_11545 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IRJ34_07080 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IRJ34_00445 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IRJ34_07770 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IRJ34_11645 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IRJ34_09340 metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IRJ34_11505 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IRJ34_01430 hypothetical protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IRJ34_08125 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IRJ34_08130 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IRJ34_07825 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_14880 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IRJ34_14130 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IRJ34_17905 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D IRJ34_12430 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D IRJ34_08030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IRJ34_19365 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IRJ34_06970 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D IRJ34_08190 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D IRJ34_15390 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D IRJ34_13775 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D IRJ34_12555 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IRJ34_17430 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D IRJ34_04825 serC; (GenBank) phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pago00194]
D IRJ34_12990 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D IRJ34_12995 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D IRJ34_13000 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D IRJ34_13005 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D IRJ34_13010 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D IRJ34_13015 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D IRJ34_13020 atpE; (GenBank) ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D IRJ34_13025 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pago03000]
D IRJ34_08220 AlkA N-terminal domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D IRJ34_04775 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D IRJ34_09365 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D IRJ34_07020 DeoR/GlpR family DNA-binding transcription regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D IRJ34_01340 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D IRJ34_01850 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IRJ34_02495 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IRJ34_03010 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IRJ34_04320 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IRJ34_07715 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IRJ34_09765 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IRJ34_15625 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IRJ34_16320 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IRJ34_16500 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IRJ34_18345 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IRJ34_18420 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IRJ34_02275 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D IRJ34_02950 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D IRJ34_17325 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D IRJ34_11170 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D IRJ34_10340 GntR family transcriptional regulator K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D IRJ34_13685 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D IRJ34_09265 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D IRJ34_19050 TetR/AcrR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D IRJ34_09290 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D IRJ34_20590 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D IRJ34_02760 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D IRJ34_06055 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D IRJ34_12650 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D IRJ34_17595 soxR; (GenBank) redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D IRJ34_05735 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D IRJ34_17800 helix-turn-helix transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D IRJ34_13175 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D IRJ34_15335 Fur family transcriptional regulator K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D IRJ34_01525 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D IRJ34_16715 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D IRJ34_20255 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D IRJ34_19975 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D IRJ34_16540 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IRJ34_03805 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D IRJ34_03285 helix-turn-helix domain-containing protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D IRJ34_07965 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D IRJ34_19150 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D IRJ34_04830 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D IRJ34_13265 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D IRJ34_08845 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IRJ34_06780 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D IRJ34_16160 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D IRJ34_07495 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D IRJ34_02870 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D IRJ34_06350 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D IRJ34_13440 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D IRJ34_20280 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D IRJ34_15400 PucR family transcriptional regulator ligand-binding domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D IRJ34_18475 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D IRJ34_20735 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IRJ34_04035 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D IRJ34_08200 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D IRJ34_11290 hrcA; (GenBank) heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D IRJ34_02195 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D IRJ34_10370 PaaX family transcriptional regulator C-terminal domain-containing protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D IRJ34_19915 PaaX family transcriptional regulator C-terminal domain-containing protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D IRJ34_11370 sugar-binding domain-containing protein K05346 deoR; deoxyribonucleoside regulator
D IRJ34_11450 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D IRJ34_01235 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D IRJ34_10195 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D IRJ34_08640 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D IRJ34_08520 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pago03021]
D IRJ34_04795 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D IRJ34_14620 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IRJ34_14820 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IRJ34_14815 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IRJ34_11405 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D IRJ34_08815 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D IRJ34_02065 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IRJ34_05885 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IRJ34_13230 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IRJ34_13635 sigK; (GenBank) ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IRJ34_17150 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IRJ34_17685 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IRJ34_19515 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IRJ34_00470 sigma-70 family RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
D IRJ34_04665 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D IRJ34_07800 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D IRJ34_11460 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D IRJ34_14865 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D IRJ34_17395 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D IRJ34_17405 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D IRJ34_17410 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D IRJ34_10195 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D IRJ34_06225 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D IRJ34_13070 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pago03019]
D IRJ34_18915 GNAT family N-acetyltransferase K13525 VCP; transitional endoplasmic reticulum ATPase
D IRJ34_11900 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D IRJ34_12410 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IRJ34_07945 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D IRJ34_04075 ribonuclease domain-containing protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D IRJ34_12080 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D IRJ34_15125 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IRJ34_03820 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IRJ34_04350 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IRJ34_06120 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IRJ34_07855 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D IRJ34_13070 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D IRJ34_17815 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D IRJ34_04745 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IRJ34_14400 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IRJ34_14965 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D IRJ34_20225 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D IRJ34_04655 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D IRJ34_19075 rraA; (GenBank) ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D IRJ34_10515 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D IRJ34_11030 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D IRJ34_13145 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D IRJ34_10275 hrpB; (GenBank) ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pago03011]
D IRJ34_10435 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D IRJ34_07525 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D IRJ34_14740 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D IRJ34_11520 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D IRJ34_14690 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D IRJ34_20510 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D IRJ34_14805 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D IRJ34_14705 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D IRJ34_14545 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D IRJ34_14775 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D IRJ34_14625 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D IRJ34_14810 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D IRJ34_14630 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D IRJ34_18645 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D IRJ34_07850 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D IRJ34_12320 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D IRJ34_14725 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D IRJ34_20500 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D IRJ34_14750 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D IRJ34_11320 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D IRJ34_14855 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D IRJ34_14755 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D IRJ34_14770 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D IRJ34_14765 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D IRJ34_14710 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D IRJ34_14700 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D IRJ34_20495 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D IRJ34_14840 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D IRJ34_14860 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D IRJ34_14835 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D IRJ34_14550 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D IRJ34_14720 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D IRJ34_14680 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D IRJ34_14735 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D IRJ34_14615 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D IRJ34_14695 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D IRJ34_12300 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D IRJ34_08080 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D IRJ34_11890 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D IRJ34_14745 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D IRJ34_14760 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D IRJ34_14715 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D IRJ34_11885 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D IRJ34_18655 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D IRJ34_14730 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D IRJ34_14685 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D IRJ34_10755 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D IRJ34_12415 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D IRJ34_18650 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D IRJ34_20770 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D IRJ34_08075 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D IRJ34_14425 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D IRJ34_14635 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D IRJ34_06495 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D IRJ34_00665 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_00690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_04105 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_08240 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_18615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_18640 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_00670 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_00695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_04110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_08245 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_18610 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_18635 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pago03009]
D IRJ34_12410 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IRJ34_12080 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D IRJ34_18915 GNAT family N-acetyltransferase K13525 VCP; transitional endoplasmic reticulum ATPase
D IRJ34_11255 era; (GenBank) GTPase Era K03595 era; GTPase
D IRJ34_11880 obgE; (GenBank) GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D IRJ34_10195 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D IRJ34_07800 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D IRJ34_11460 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D IRJ34_14865 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D IRJ34_06455 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D IRJ34_09125 transcription antitermination factor NusB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D IRJ34_08005 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D IRJ34_11825 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D IRJ34_12440 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D IRJ34_11280 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D IRJ34_20745 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D IRJ34_08525 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D IRJ34_06420 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D IRJ34_08275 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D IRJ34_11060 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D IRJ34_04060 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D IRJ34_03465 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D IRJ34_08365 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D IRJ34_08615 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D IRJ34_14445 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D IRJ34_14315 GNAT family protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D IRJ34_18600 GNAT family protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D IRJ34_12310 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D IRJ34_17185 YcaO-like family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D IRJ34_11900 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D IRJ34_11500 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D IRJ34_15125 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IRJ34_13245 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D IRJ34_14155 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D IRJ34_08385 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D IRJ34_08010 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D IRJ34_13055 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D IRJ34_11565 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D IRJ34_07815 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D IRJ34_07795 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D IRJ34_07070 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D IRJ34_11850 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D IRJ34_11265 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D IRJ34_14095 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D IRJ34_12420 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pago03016]
D IRJ34_04075 ribonuclease domain-containing protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D IRJ34_20705 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D IRJ34_12530 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IRJ34_18945 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IRJ34_07770 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IRJ34_11925 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IRJ34_11350 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IRJ34_12585 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IRJ34_13095 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IRJ34_00735 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IRJ34_11540 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IRJ34_09340 metal-dependent hydrolase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IRJ34_11505 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IRJ34_07080 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IRJ34_11645 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IRJ34_00445 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IRJ34_04055 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IRJ34_11940 valS; (GenBank) valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IRJ34_11545 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IRJ34_01430 hypothetical protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IRJ34_08125 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IRJ34_08130 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IRJ34_08235 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IRJ34_05985 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D IRJ34_10965 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D IRJ34_17665 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D IRJ34_14610 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D IRJ34_07830 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D IRJ34_12725 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IRJ34_13605 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IRJ34_13055 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D IRJ34_07995 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D IRJ34_09560 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D IRJ34_20765 rnpA; (GenBank) ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D IRJ34_12870 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D IRJ34_09000 HRDC domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D IRJ34_12035 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D IRJ34_09040 ybaK; (GenBank) Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D IRJ34_14830 YbaK/EbsC family protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D IRJ34_03620 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D IRJ34_07990 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D IRJ34_12305 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D IRJ34_13630 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D IRJ34_08085 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D IRJ34_03465 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D IRJ34_13595 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D IRJ34_14935 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D IRJ34_03605 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D IRJ34_03350 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D IRJ34_00590 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D IRJ34_14450 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D IRJ34_14440 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D IRJ34_14455 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D IRJ34_07855 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pago03012]
D IRJ34_07810 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D IRJ34_08070 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D IRJ34_07530 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D IRJ34_14795 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D IRJ34_10300 elongation factor G-like protein EF-G2 K02355 fusA; elongation factor G
D IRJ34_14800 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D IRJ34_09575 selB; (GenBank) selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D IRJ34_13065 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D IRJ34_07540 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D IRJ34_01255 putative protein N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D IRJ34_13060 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D IRJ34_06500 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D IRJ34_14640 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D IRJ34_11465 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D IRJ34_13310 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D IRJ34_10170 arfB; (GenBank) alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pago03110]
D IRJ34_17500 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D IRJ34_00750 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D IRJ34_11955 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D IRJ34_17815 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D IRJ34_04745 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IRJ34_14400 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IRJ34_11285 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D IRJ34_17805 DnaJ C-terminal domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D IRJ34_17810 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D IRJ34_05740 HSP20 family small heat-shock protein K13993 HSP20; HSP20 family protein
D IRJ34_18845 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D IRJ34_14405 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D IRJ34_00610 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IRJ34_13025 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D IRJ34_03535 YcnI family protein K09796 pccA; periplasmic copper chaperone A
D IRJ34_15665 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D IRJ34_15670 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D IRJ34_04205 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IRJ34_20260 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D IRJ34_00075 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D IRJ34_11550 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D IRJ34_15210 thioredoxin domain-containing protein K03671 TXN; thioredoxin
D IRJ34_20730 trxA; (GenBank) thioredoxin K03671 TXN; thioredoxin
D IRJ34_12935 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:pago04131]
D IRJ34_11910 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D IRJ34_18915 GNAT family N-acetyltransferase K13525 VCP; transitional endoplasmic reticulum ATPase
D IRJ34_05755 SPFH domain-containing protein K07192 FLOT; flotillin
D IRJ34_04875 glycoside hydrolase family 38 C-terminal domain-containing protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D IRJ34_03070 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_10535 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_12110 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_04010 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D IRJ34_09235 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IRJ34_18220 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:pago04121]
D IRJ34_10980 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:pago03051]
D IRJ34_10990 prcA; (GenBank) proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D IRJ34_10985 prcB; (GenBank) proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D IRJ34_10970 arc; (GenBank) proteasome ATPase K13527 mpa; proteasome-associated ATPase
D IRJ34_10995 pafA; (GenBank) Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D IRJ34_11010 WYL domain-containing protein K24033 pafBC; proteasome accessory factor BC
D IRJ34_10975 dop; (GenBank) depupylase/deamidase Dop K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:pago03032]
D IRJ34_04750 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D IRJ34_18595 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D IRJ34_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D IRJ34_20395 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D IRJ34_07130 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D IRJ34_07420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_12060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_20505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_08620 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IRJ34_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IRJ34_11325 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IRJ34_03985 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IRJ34_12855 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IRJ34_13750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IRJ34_02845 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IRJ34_12285 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D IRJ34_10420 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IRJ34_06850 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IRJ34_00035 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IRJ34_08880 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IRJ34_00030 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IRJ34_08825 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IRJ34_01310 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D IRJ34_16380 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pago03036]
D IRJ34_12410 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IRJ34_05755 SPFH domain-containing protein K07192 FLOT; flotillin
D IRJ34_00745 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2
D IRJ34_18595 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D IRJ34_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D IRJ34_01305 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D IRJ34_04775 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D IRJ34_09365 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D IRJ34_09290 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D IRJ34_20590 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D IRJ34_12380 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D IRJ34_08355 ScpA family protein K05896 scpA; segregation and condensation protein A
D IRJ34_08360 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D IRJ34_13305 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D IRJ34_08535 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D IRJ34_03555 FtsK/SpoIIIE domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D IRJ34_06840 FtsK/SpoIIIE domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D IRJ34_07950 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D IRJ34_08575 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D IRJ34_00150 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D IRJ34_08560 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D IRJ34_13300 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D IRJ34_08580 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IRJ34_09055 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE
D IRJ34_14225 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE
D IRJ34_08595 sepF; (GenBank) cell division protein SepF K09772 sepF; cell division inhibitor SepF
D IRJ34_08350 AAA family ATPase K03496 parA; chromosome partitioning protein
D IRJ34_08435 ParA family protein K03496 parA; chromosome partitioning protein
D IRJ34_20740 AAA family ATPase K03496 parA; chromosome partitioning protein
D IRJ34_20735 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IRJ34_20745 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D IRJ34_12260 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D IRJ34_08300 xerD; (GenBank) site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D IRJ34_13915 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D IRJ34_10525 whiA; (GenBank) DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:pago03400]
D IRJ34_00100 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D IRJ34_00110 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D IRJ34_02165 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D IRJ34_04725 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D IRJ34_08225 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D IRJ34_00835 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D IRJ34_16470 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D IRJ34_04795 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D IRJ34_04915 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IRJ34_08100 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IRJ34_08310 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IRJ34_14160 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IRJ34_08920 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D IRJ34_00095 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D IRJ34_08220 AlkA N-terminal domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D IRJ34_00090 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D IRJ34_11945 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D IRJ34_12405 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D IRJ34_03520 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D IRJ34_11985 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D IRJ34_01945 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D IRJ34_05980 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D IRJ34_06850 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IRJ34_10420 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IRJ34_10160 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D IRJ34_10495 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D IRJ34_10450 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D IRJ34_10510 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D IRJ34_04995 pcrA; (GenBank) DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IRJ34_13720 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IRJ34_13735 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IRJ34_14820 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IRJ34_14815 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IRJ34_14620 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IRJ34_11405 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D IRJ34_06550 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D IRJ34_14115 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D IRJ34_14120 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D IRJ34_08620 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IRJ34_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IRJ34_11325 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IRJ34_03985 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IRJ34_12855 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IRJ34_13750 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D IRJ34_02845 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IRJ34_07420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_12060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_20505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_05240 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D IRJ34_07980 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D IRJ34_11590 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D IRJ34_11585 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D IRJ34_11595 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D IRJ34_11390 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D IRJ34_12820 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D IRJ34_12825 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D IRJ34_00860 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D IRJ34_00020 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D IRJ34_12445 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D IRJ34_11235 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D IRJ34_02840 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D IRJ34_08285 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D IRJ34_18575 helicase HerA-like domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D IRJ34_01275 Ku protein K10979 ku; DNA end-binding protein Ku
D IRJ34_01270 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D IRJ34_10145 ligD; (GenBank) non-homologous end-joining DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D IRJ34_00035 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IRJ34_08880 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IRJ34_00030 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IRJ34_08825 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IRJ34_01310 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D IRJ34_16380 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D IRJ34_18595 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D IRJ34_03820 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IRJ34_04350 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D IRJ34_08510 dinB; (GenBank) DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D IRJ34_18030 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D IRJ34_06635 Y-family DNA polymerase K03502 umuC; DNA polymerase V
D IRJ34_06620 umuD; (GenBank) translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D IRJ34_08020 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D IRJ34_11650 dnaE; (GenBank) DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D IRJ34_07985 regulatory protein RecX K03565 recX; regulatory protein
D IRJ34_08015 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D IRJ34_03525 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D IRJ34_14970 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D IRJ34_08295 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D IRJ34_11745 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IRJ34_11740 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pago03029]
D IRJ34_07810 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D IRJ34_08070 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D IRJ34_07530 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D IRJ34_14795 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D IRJ34_10300 elongation factor G-like protein EF-G2 K02355 fusA; elongation factor G
D IRJ34_14800 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D IRJ34_11255 era; (GenBank) GTPase Era K03595 era; GTPase
D IRJ34_08235 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IRJ34_11350 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IRJ34_11540 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IRJ34_07080 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IRJ34_13095 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IRJ34_06915 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D IRJ34_06920 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D IRJ34_06910 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D IRJ34_04700 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D IRJ34_07420 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_12060 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_20505 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D IRJ34_17815 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D IRJ34_17810 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D IRJ34_04745 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IRJ34_14400 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IRJ34_14405 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D IRJ34_11285 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D IRJ34_17805 DnaJ C-terminal domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D IRJ34_12725 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IRJ34_13605 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IRJ34_13915 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D IRJ34_10590 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D IRJ34_10615 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D IRJ34_20755 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pago02000]
D IRJ34_05180 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D IRJ34_17000 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D IRJ34_05185 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D IRJ34_16995 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D IRJ34_14375 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D IRJ34_16570 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D IRJ34_16575 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D IRJ34_08860 cydD; (GenBank) thiol reductant ABC exporter subunit CydD K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D IRJ34_16045 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D IRJ34_10610 ATP-binding cassette domain-containing protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D IRJ34_06465 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D IRJ34_17520 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D IRJ34_17515 ABC transporter permease K02018 modB; molybdate transport system permease protein
D IRJ34_17510 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D IRJ34_15505 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D IRJ34_15495 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D IRJ34_15500 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D IRJ34_03395 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D IRJ34_03390 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D IRJ34_03385 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D IRJ34_14135 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D IRJ34_19095 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D IRJ34_14140 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D IRJ34_14145 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D IRJ34_19100 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D IRJ34_19105 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D IRJ34_14150 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D IRJ34_19110 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D IRJ34_15060 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D IRJ34_15055 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D IRJ34_04210 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IRJ34_01855 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D IRJ34_04335 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D IRJ34_07710 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D IRJ34_15090 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D IRJ34_01860 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_04330 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_07705 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_15085 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_01865 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_04325 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_07700 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_15080 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D IRJ34_01920 extracellular solute-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D IRJ34_01925 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D IRJ34_01930 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D IRJ34_17320 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D IRJ34_17315 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D IRJ34_17310 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D IRJ34_02605 ngcE; (GenBank) N-acetylglucosamine/diacetylchitobiose ABC transporter substrate-binding protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D IRJ34_02610 sugar ABC transporter permease K10201 ngcF; N-acetylglucosamine transport system permease protein
D IRJ34_02615 carbohydrate ABC transporter permease K10202 ngcG; N-acetylglucosamine transport system permease protein
D IRJ34_20275 extracellular solute-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D IRJ34_20270 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D IRJ34_20265 carbohydrate ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D IRJ34_06945 sugar ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D IRJ34_16220 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D IRJ34_06935 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D IRJ34_16215 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D IRJ34_06940 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D IRJ34_16210 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D IRJ34_02325 chvE; (GenBank) multiple monosaccharide ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D IRJ34_05855 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D IRJ34_02335 mmsB; (GenBank) multiple monosaccharide ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D IRJ34_05860 mmsB; (GenBank) multiple monosaccharide ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D IRJ34_02330 mmsA; (GenBank) multiple monosaccharide ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IRJ34_05865 mmsA; (GenBank) multiple monosaccharide ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IRJ34_10070 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D IRJ34_10060 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D IRJ34_10065 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D IRJ34_10725 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D IRJ34_14660 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D IRJ34_14650 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D IRJ34_14655 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D IRJ34_06015 sugar ABC transporter substrate-binding protein K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D IRJ34_16255 ABC transporter substrate-binding protein K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D IRJ34_16265 extracellular solute-binding protein K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D IRJ34_16250 sugar ABC transporter permease K25677 yesP; pectin-derived oligosaccharide transport system permease protein
D IRJ34_16275 sugar ABC transporter permease K25677 yesP; pectin-derived oligosaccharide transport system permease protein
D IRJ34_16245 carbohydrate ABC transporter permease K25678 yesQ; pectin-derived oligosaccharide transport system permease protein
D IRJ34_16270 carbohydrate ABC transporter permease K25678 yesQ; pectin-derived oligosaccharide transport system permease protein
D IRJ34_06070 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D IRJ34_09680 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D IRJ34_06080 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D IRJ34_09670 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D IRJ34_06085 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D IRJ34_09665 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D IRJ34_06075 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D IRJ34_09675 ATP-binding cassette domain-containing protein K23537 nupA; general nucleoside transport system ATP-binding protein
D IRJ34_09795 ABC transporter permease K02069 STAR2; UDP-glucose/iron transport system permease protein
D IRJ34_02280 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IRJ34_02445 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IRJ34_02955 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IRJ34_03025 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IRJ34_03250 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IRJ34_11815 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IRJ34_15645 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IRJ34_16520 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IRJ34_19535 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IRJ34_19865 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IRJ34_02285 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D IRJ34_02440 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D IRJ34_02960 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D IRJ34_03020 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D IRJ34_03245 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D IRJ34_11810 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D IRJ34_15640 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D IRJ34_16510 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D IRJ34_19540 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D IRJ34_19870 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D IRJ34_02290 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IRJ34_02435 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IRJ34_02965 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IRJ34_03015 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IRJ34_03240 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IRJ34_11805 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IRJ34_15635 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IRJ34_16515 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IRJ34_19545 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IRJ34_19875 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IRJ34_05070 substrate-binding domain-containing protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D IRJ34_05075 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D IRJ34_05080 ATP-binding cassette domain-containing protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IRJ34_00870 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D IRJ34_00875 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D IRJ34_00880 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D IRJ34_00885 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D IRJ34_13965 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D IRJ34_13970 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D IRJ34_13975 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D IRJ34_13960 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D IRJ34_04890 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D IRJ34_04885 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D IRJ34_04880 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D IRJ34_06160 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D IRJ34_06180 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D IRJ34_06175 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D IRJ34_06170 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D IRJ34_06165 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D IRJ34_16920 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D IRJ34_16910 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D IRJ34_16915 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D IRJ34_01405 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IRJ34_02500 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IRJ34_09380 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IRJ34_13755 ABC transporter substrate-binding protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D IRJ34_15575 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IRJ34_17755 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IRJ34_18505 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IRJ34_18550 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IRJ34_01410 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D IRJ34_02505 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D IRJ34_09375 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D IRJ34_13760 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D IRJ34_15580 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D IRJ34_17765 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D IRJ34_18560 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D IRJ34_01415 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D IRJ34_02510 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D IRJ34_09370 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D IRJ34_13765 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D IRJ34_15585 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D IRJ34_18555 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D IRJ34_14060 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D IRJ34_14055 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D IRJ34_14050 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D IRJ34_14045 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D IRJ34_03710 ABC transporter permease K12370 dppC; dipeptide transport system permease protein
D IRJ34_19265 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D IRJ34_19280 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D IRJ34_19275 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D IRJ34_19270 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D IRJ34_03700 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_04180 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_04245 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_09475 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_09640 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_09760 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_12665 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_13580 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IRJ34_03705 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_03780 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_04170 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_04265 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_09470 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_09635 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_09755 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_13575 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IRJ34_03775 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_04185 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IRJ34_04260 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IRJ34_09465 ABC transporter permease K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_09630 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IRJ34_09750 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IRJ34_13570 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IRJ34_03715 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_04165 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_04255 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_09460 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_09625 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_09745 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_13565 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IRJ34_03770 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IRJ34_04160 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IRJ34_09455 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IRJ34_09740 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IRJ34_18720 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D IRJ34_18715 iron chelate uptake ABC transporter family permease subunit K23186 fepD; iron-siderophore transport system permease protein
D IRJ34_18710 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D IRJ34_18705 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D IRJ34_10740 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D IRJ34_10685 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D IRJ34_10675 energy-coupling factor transporter transmembrane component T K16783 bioN; biotin transport system permease protein
D IRJ34_10680 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D IRJ34_18165 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D IRJ34_18170 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D IRJ34_18175 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein
D IRJ34_13190 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D IRJ34_13180 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D IRJ34_13185 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D IRJ34_15780 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein
D IRJ34_15775 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D IRJ34_05965 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D IRJ34_05970 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D IRJ34_05960 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D IRJ34_20665 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D IRJ34_20670 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D IRJ34_15225 ABC transporter permease subunit K25147 berB; beta-exotoxin I transport system permease protein
D IRJ34_15220 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D IRJ34_13300 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D IRJ34_13305 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D IRJ34_07105 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IRJ34_07760 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IRJ34_10320 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IRJ34_10620 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IRJ34_12920 transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D IRJ34_13395 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IRJ34_19165 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D IRJ34_20610 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D IRJ34_05680 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IRJ34_07100 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IRJ34_07765 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IRJ34_10325 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IRJ34_10625 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IRJ34_12925 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IRJ34_13390 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IRJ34_17175 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IRJ34_19160 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IRJ34_20475 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IRJ34_20615 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IRJ34_05840 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D IRJ34_05850 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D IRJ34_12580 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D IRJ34_05835 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IRJ34_05845 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IRJ34_12575 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IRJ34_16490 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IRJ34_10650 sufC; (GenBank) Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D IRJ34_18825 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D IRJ34_20345 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D IRJ34_05055 sugar porter family MFS transporter K06609 iolT; MFS transporter, SP family, major inositol transporter
D IRJ34_06630 sugar porter family MFS transporter K06609 iolT; MFS transporter, SP family, major inositol transporter
D IRJ34_03330 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D IRJ34_17635 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D IRJ34_01250 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D IRJ34_17245 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D IRJ34_18995 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D IRJ34_12190 MFS transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D IRJ34_19790 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D IRJ34_05325 MFS transporter K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D IRJ34_09850 aromatic acid/H+ symport family MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D IRJ34_19675 MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D IRJ34_19930 aromatic acid/H+ symport family MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D IRJ34_01530 aromatic acid/H+ symport family MFS transporter K26749 genK; MFS transporter, AAHS family, 2,5-dihydroxybenzoate transporter
D IRJ34_03270 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D IRJ34_04145 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D IRJ34_15405 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D IRJ34_17640 CynX/NimT family MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D IRJ34_06695 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D IRJ34_07160 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D IRJ34_08095 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D IRJ34_08400 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D IRJ34_15620 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D IRJ34_04670 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D IRJ34_00660 DHA2 family efflux MFS transporter permease subunit K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D IRJ34_19135 MFS transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D IRJ34_14190 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D IRJ34_18220 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D IRJ34_05900 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D IRJ34_05780 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D IRJ34_16865 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D IRJ34_19190 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D IRJ34_01325 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D IRJ34_11175 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D IRJ34_19195 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D IRJ34_14360 PTS sugar transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D IRJ34_01330 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D IRJ34_19180 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D IRJ34_00795 dhaM; (GenBank) dihydroxyacetone kinase phosphoryl donor subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D IRJ34_12830 aquaporin K06188 aqpZ; aquaporin Z
D IRJ34_03130 MIP/aquaporin family protein K02440 glpF; glycerol uptake facilitator
D IRJ34_11360 MIP/aquaporin family protein K02440 glpF; glycerol uptake facilitator
D IRJ34_15240 ion channel K10716 kch; voltage-gated potassium channel
D IRJ34_12365 ammonium transporter K03320 amt; ammonium transporter, Amt family
D IRJ34_16815 ammonium transporter K03320 amt; ammonium transporter, Amt family
D IRJ34_11780 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D IRJ34_19780 mscL; (GenBank) large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D IRJ34_12015 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D IRJ34_04600 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D IRJ34_04605 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D IRJ34_14220 corA; (GenBank) magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D IRJ34_14235 crcB; (GenBank) fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D IRJ34_14240 CrcB family protein K06199 crcB; fluoride exporter
D IRJ34_09980 TMEM175 family protein K24915 TMEM175; TMEM175 potassium channel family protein
D IRJ34_14195 TMEM175 family protein K24915 TMEM175; TMEM175 potassium channel family protein
D IRJ34_11260 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IRJ34_13195 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IRJ34_13200 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IRJ34_18820 PQQ-binding-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB
D IRJ34_20535 amino acid permease K11735 gabP; GABA permease
D IRJ34_03845 cycA; (GenBank) D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D IRJ34_19170 cycA; (GenBank) D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D IRJ34_15445 amino acid permease K11738 ansP; L-asparagine permease
D IRJ34_16040 amino acid permease K11738 ansP; L-asparagine permease
D IRJ34_18885 amino acid permease K11738 ansP; L-asparagine permease
D IRJ34_01715 amino acid permease K16234 hutT; histidine transporter
D IRJ34_18095 amino acid permease K16235 mmuP; S-methylmethionine transporter
D IRJ34_20570 amino acid permease K16235 mmuP; S-methylmethionine transporter
D IRJ34_02215 APC family permease K28029 UGA4; amino acid or GABA permease
D IRJ34_17925 amino acid permease K16263 yjeH; amino acid efflux transporter
D IRJ34_01795 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D IRJ34_19695 ZIP family zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D IRJ34_09255 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D IRJ34_09260 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D IRJ34_17565 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D IRJ34_17570 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D IRJ34_03680 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D IRJ34_05560 EamA family transporter K15269 pecM; probable blue pigment (indigoidine) exporter
D IRJ34_09355 EamA family transporter K11939 rhtA; inner membrane transporter RhtA
D IRJ34_19630 EamA family transporter K11939 rhtA; inner membrane transporter RhtA
D IRJ34_15380 rarD; (GenBank) EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D IRJ34_07075 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D IRJ34_20515 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D IRJ34_01115 GntP family transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D IRJ34_13645 gluconate:H+ symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D IRJ34_20130 gluconate:H+ symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D IRJ34_07560 cation acetate symporter K14393 actP; cation/acetate symporter
D IRJ34_07585 sodium/solute symporter K14393 actP; cation/acetate symporter
D IRJ34_08345 cation:dicarboxylase symporter family transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D IRJ34_16620 cation:dicarboxylase symporter family transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D IRJ34_06530 nhaA; (GenBank) Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D IRJ34_15100 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D IRJ34_18225 cation:proton antiporter regulatory subunit K07228 khtT; K+:H+ antiporter subunit KhtT
D IRJ34_18230 cation:proton antiporter K26732 khtU; K+:H+ antiporter subunit KhtU
D IRJ34_16350 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D IRJ34_08940 NAD-binding protein K03499 trkA; trk/ktr system potassium uptake protein
D IRJ34_08945 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D IRJ34_16355 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D IRJ34_16710 nucleobase:cation symporter-2 family protein K24206 uacT; uric acid transporter
D IRJ34_01765 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D IRJ34_16675 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D IRJ34_09060 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D IRJ34_00975 nickel transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D IRJ34_00270 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D IRJ34_16050 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D IRJ34_12705 ArsB/NhaD family transporter K03893 arsB; arsenical pump membrane protein
D IRJ34_18215 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D IRJ34_18210 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D IRJ34_18205 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D IRJ34_18200 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D IRJ34_18195 monovalent cation/H+ antiporter complex subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D IRJ34_18190 mnhG; (GenBank) monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D IRJ34_20715 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D IRJ34_18455 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D IRJ34_04770 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D IRJ34_18035 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein
D IRJ34_01640 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D IRJ34_01645 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D IRJ34_03040 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D IRJ34_03045 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D IRJ34_03050 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D IRJ34_06210 AI-2E family transporter K20469 K20469; putative heme transporter
D IRJ34_06905 AI-2E family transporter K20469 K20469; putative heme transporter
D IRJ34_03345 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D IRJ34_05125 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D IRJ34_07785 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D IRJ34_00150 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D IRJ34_08560 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D IRJ34_03155 manganese efflux pump K23242 mntP; manganese efflux pump family protein
D IRJ34_15305 efeU; (GenBank) iron uptake transporter permease EfeU K07243 FTR; high-affinity iron transporter
D IRJ34_15310 efeO; (GenBank) iron uptake system protein EfeO K07224 efeO; iron uptake system component EfeO
D IRJ34_15315 efeB; (GenBank) iron uptake transporter deferrochelatase/peroxidase subunit K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D IRJ34_03880 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D IRJ34_16130 cytochrome c biogenesis CcdA family protein K06196 ccdA; cytochrome c-type biogenesis protein
D IRJ34_09135 pnuC; (GenBank) nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D IRJ34_17455 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D IRJ34_12840 DUF202 domain-containing protein K00389 yidH; inner membrane protein YidH
D IRJ34_01770 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:pago02044]
D IRJ34_14565 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D IRJ34_14570 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D IRJ34_13345 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IRJ34_14575 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IRJ34_16445 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IRJ34_13340 type II secretion system F family protein K12510 tadB; tight adherence protein B
D IRJ34_14580 type II secretion system F family protein K12510 tadB; tight adherence protein B
D IRJ34_16440 hypothetical protein K12510 tadB; tight adherence protein B
D IRJ34_13335 type II secretion system F family protein K12511 tadC; tight adherence protein C
D IRJ34_14585 type II secretion system F family protein K12511 tadC; tight adherence protein C
D IRJ34_16435 type II secretion system F family protein K12511 tadC; tight adherence protein C
D IRJ34_13325 TadE/TadG family type IV pilus assembly protein K12513 tadE; tight adherence protein E
D IRJ34_14590 TadE/TadG family type IV pilus assembly protein K12513 tadE; tight adherence protein E
D IRJ34_13330 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D IRJ34_14560 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D IRJ34_08600 YggT family protein K02221 yggT; YggT family protein
D IRJ34_11340 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D IRJ34_11335 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D IRJ34_04645 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D IRJ34_04640 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D IRJ34_04550 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D IRJ34_04560 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D IRJ34_04565 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D IRJ34_04615 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D IRJ34_04620 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D IRJ34_04625 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D IRJ34_04630 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D IRJ34_04635 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D IRJ34_13485 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IRJ34_11575 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D IRJ34_14870 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IRJ34_11570 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D IRJ34_10550 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IRJ34_14675 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D IRJ34_12350 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IRJ34_12375 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IRJ34_11580 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IRJ34_20755 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IRJ34_11020 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D IRJ34_13920 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D IRJ34_11025 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pago02042]
D IRJ34_11260 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IRJ34_13195 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IRJ34_13200 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IRJ34_06250 hemolysin III family protein K11068 hlyIII; hemolysin III
D IRJ34_03960 alkaline phosphatase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D IRJ34_15175 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:pago02022]
D IRJ34_05225 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IRJ34_10025 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IRJ34_04020 ATP-binding protein K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D IRJ34_04025 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D IRJ34_15140 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D IRJ34_15135 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D IRJ34_15940 ATP-binding protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D IRJ34_13510 mtrB; (GenBank) MtrAB system histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D IRJ34_13515 mtrA; (GenBank) MtrAB system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D IRJ34_03655 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D IRJ34_04760 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D IRJ34_03660 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D IRJ34_04765 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D IRJ34_17855 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D IRJ34_07110 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D IRJ34_17655 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D IRJ34_07115 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D IRJ34_17660 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D IRJ34_03055 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D IRJ34_06885 ATP-binding protein K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D IRJ34_07575 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D IRJ34_07570 LytTR family DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator
D IRJ34_13445 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D IRJ34_09245 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:pago02035]
D IRJ34_04560 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D IRJ34_04565 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D IRJ34_04570 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ
D IRJ34_04620 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D IRJ34_04625 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D IRJ34_04630 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D IRJ34_04635 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D IRJ34_04645 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D IRJ34_04640 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D IRJ34_04555 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D IRJ34_10030 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D IRJ34_04610 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D IRJ34_04615 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D IRJ34_04550 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D IRJ34_04545 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D IRJ34_04580 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D IRJ34_04535 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D IRJ34_04540 flagellar basal body rod C-terminal domain-containing protein K02388 flgC; flagellar basal-body rod protein FlgC
D IRJ34_04585 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D IRJ34_04590 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D IRJ34_04495 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D IRJ34_04490 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D IRJ34_04505 flagellin K02406 fliC; flagellin
D IRJ34_04510 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D IRJ34_04515 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D IRJ34_04665 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D IRJ34_04600 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D IRJ34_04605 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D IRJ34_04890 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D IRJ34_04485 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D IRJ34_04595 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D IRJ34_13330 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D IRJ34_14560 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D IRJ34_14565 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D IRJ34_14570 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D IRJ34_13345 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IRJ34_14575 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IRJ34_16445 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pago04812]
D IRJ34_08580 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IRJ34_08350 AAA family ATPase K03496 parA; chromosome partitioning protein
D IRJ34_08435 ParA family protein K03496 parA; chromosome partitioning protein
D IRJ34_20740 AAA family ATPase K03496 parA; chromosome partitioning protein
D IRJ34_20735 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pago04147]
D IRJ34_06120 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IRJ34_03070 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_10535 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_12110 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IRJ34_10540 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D IRJ34_09235 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IRJ34_00075 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D IRJ34_03120 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D IRJ34_17770 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D IRJ34_05755 SPFH domain-containing protein K07192 FLOT; flotillin
D IRJ34_04745 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IRJ34_14400 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IRJ34_17815 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D IRJ34_10575 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IRJ34_02460 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D IRJ34_14370 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IRJ34_14380 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IRJ34_14795 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D IRJ34_18915 GNAT family N-acetyltransferase K13525 VCP; transitional endoplasmic reticulum ATPase
D IRJ34_06410 AMP-dependent synthetase/ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D IRJ34_08445 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D IRJ34_01975 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06190 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10670 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_10815 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_14825 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IRJ34_06380 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D IRJ34_14670 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IRJ34_16845 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IRJ34_08210 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IRJ34_08205 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IRJ34_19805 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D IRJ34_18905 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D IRJ34_06195 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IRJ34_04100 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D IRJ34_11355 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D IRJ34_08670 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_08715 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IRJ34_13785 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D IRJ34_12600 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IRJ34_05800 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IRJ34_08790 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IRJ34_13660 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D IRJ34_10570 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D IRJ34_12355 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D IRJ34_05330 triose-phosphate isomerase family protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IRJ34_10545 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IRJ34_04010 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:pago02048]
D IRJ34_18270 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D IRJ34_18280 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D IRJ34_13880 DNA methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D IRJ34_05210 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D IRJ34_05620 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D IRJ34_05215 restriction endonuclease K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D IRJ34_05625 restriction endonuclease K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D IRJ34_05395 type II toxin-antitoxin system VapC family toxin K28275 vapC35S; ribonuclease VapC35/45/46/47 [EC:3.1.-.-]
D IRJ34_05400 type II toxin-antitoxin system prevent-host-death family antitoxin K28276 vapB35S; antitoxin VapB35/45/46/47
D IRJ34_08580 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IRJ34_12530 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IRJ34_18945 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IRJ34_12725 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IRJ34_13605 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pago01504]
D IRJ34_07780 aminoglycoside phosphotransferase family protein K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D IRJ34_16045 ABC-F family ATP-binding cassette domain-containing protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D IRJ34_13730 macrolide 2'-phosphotransferase K06979 mph; macrolide phosphotransferase
D IRJ34_04670 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D IRJ34_08840 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D IRJ34_08845 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IRJ34_14535 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D IRJ34_18250 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pago00537]
D IRJ34_03120 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D IRJ34_17770 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pago03100]
D IRJ34_00055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IRJ34_11835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IRJ34_11845 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IRJ34_14300 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IRJ34_03795 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IRJ34_04925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IRJ34_12055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IRJ34_13115 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IRJ34_07135 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IRJ34_01820 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IRJ34_01750 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IRJ34_09095 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IRJ34_06480 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IRJ34_12520 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IRJ34_01815 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IRJ34_12515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IRJ34_09075 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IRJ34_09085 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IRJ34_09100 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IRJ34_11980 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IRJ34_18310 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IRJ34_12085 tRNA-His K14226 tRNA-His; tRNA His
D IRJ34_00045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IRJ34_00170 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_06155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_09250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_10835 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_12660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_20520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IRJ34_00910 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IRJ34_12640 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IRJ34_12645 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IRJ34_07185 tRNA-Ile K14230 tRNA-Met; tRNA Met
D IRJ34_13690 tRNA-Met K14230 tRNA-Met; tRNA Met
D IRJ34_13695 tRNA-Met K14230 tRNA-Met; tRNA Met
D IRJ34_15110 tRNA-Met K14230 tRNA-Met; tRNA Met
D IRJ34_01825 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IRJ34_08390 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IRJ34_11975 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IRJ34_16580 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IRJ34_02860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IRJ34_03595 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IRJ34_03830 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IRJ34_03865 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IRJ34_03970 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IRJ34_04235 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IRJ34_15115 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IRJ34_14875 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D IRJ34_15290 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IRJ34_09080 tRNA-Val K14237 tRNA-Val; tRNA Val
D IRJ34_09090 tRNA-Val K14237 tRNA-Val; tRNA Val
D IRJ34_09105 tRNA-Val K14237 tRNA-Val; tRNA Val
D IRJ34_12205 tRNA-Val K14237 tRNA-Val; tRNA Val
D IRJ34_09565 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D IRJ34_00665 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_00690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_04105 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_08240 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_18615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_18640 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IRJ34_00670 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_00695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_04110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_08245 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_18610 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_18635 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IRJ34_13285 ssrA; (GenBank) transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D IRJ34_12170 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D IRJ34_12165 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D IRJ34_11685 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D IRJ34_01015 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D IRJ34_01030 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D IRJ34_03900 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D IRJ34_11375 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D IRJ34_18800 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D IRJ34_10110 NAD-dependent epimerase/dehydratase family protein K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D IRJ34_10040 Gfo/Idh/MocA family oxidoreductase K24995 E1.1.1.425; levoglucosan dehydrogenase [EC:1.1.1.425]
D IRJ34_14495 mgrA; (GenBank) L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D IRJ34_08985 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D IRJ34_03170 pqqC; (GenBank) pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D IRJ34_15560 geranylgeranyl reductase family protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D IRJ34_09865 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D IRJ34_13560 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D IRJ34_19905 NAD(P)-binding domain-containing protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D IRJ34_02520 FAD-binding oxidoreductase K25952 socD; fructosyl amine oxidase (glucosone-forming) [EC:1.5.3.25]
D IRJ34_06680 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D IRJ34_08165 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D IRJ34_20180 mtr; (GenBank) mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D IRJ34_12135 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D IRJ34_09025 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D IRJ34_00290 glutathione S-transferase C-terminal domain-containing protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D IRJ34_02725 manganese catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6]
D IRJ34_02475 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D IRJ34_12655 bcp; (GenBank) thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D IRJ34_17390 bcp; (GenBank) thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D IRJ34_06060 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D IRJ34_08770 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D IRJ34_12215 peroxiredoxin K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29]
D IRJ34_14170 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D IRJ34_15065 TauD/TfdA family dioxygenase K22303 atsK; alkyl sulfatase [EC:1.14.11.77]
D IRJ34_01190 lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D IRJ34_16925 LLM class flavin-dependent oxidoreductase K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-]
D IRJ34_15375 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D IRJ34_15420 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D IRJ34_11680 mycoredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D IRJ34_17980 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D IRJ34_03160 pqqE; (GenBank) pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D IRJ34_10485 trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D IRJ34_14960 mshD; (GenBank) mycothiol synthase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D IRJ34_17125 ScbA/BarX family gamma-butyrolactone biosynthesis protein K22463 afsA; 2-oxo-3-(phosphooxy)propyl 3-oxoalkanoate synthase [EC:2.3.1.277]
D IRJ34_06150 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D IRJ34_16655 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D IRJ34_10120 3-oxoacyl-ACP synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D IRJ34_00495 glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D IRJ34_14480 mshA; (GenBank) D-inositol-3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D IRJ34_09220 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D IRJ34_13105 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D IRJ34_18670 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D IRJ34_05305 dhaL; (GenBank) dihydroxyacetone kinase subunit DhaL K20902 derK; D-erythrulose 4-kinase [EC:2.7.1.210]
D IRJ34_01845 PfkB family carbohydrate kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D IRJ34_12450 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D IRJ34_09600 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D IRJ34_08675 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D IRJ34_00845 disA; (GenBank) DNA integrity scanning diadenylate cyclase DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D IRJ34_15850 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D IRJ34_01790 PEP/pyruvate-binding domain-containing protein K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D IRJ34_20435 CaiB/BaiF CoA-transferase family protein K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D IRJ34_08460 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D IRJ34_08465 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D IRJ34_03450 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D IRJ34_05190 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D IRJ34_19925 hotdog domain-containing protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D IRJ34_02355 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D IRJ34_05880 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D IRJ34_16005 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D IRJ34_13890 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D IRJ34_03670 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D IRJ34_06445 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D IRJ34_12960 nucS; (GenBank) endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D IRJ34_06995 endo-alpha-N-acetylgalactosaminidase family protein K17624 engCP; endo-alpha-N-acetylgalactosaminidase [EC:3.2.1.97]
D IRJ34_20140 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D IRJ34_09115 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D IRJ34_11070 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D IRJ34_12090 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D IRJ34_06235 mca; (GenBank) mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D IRJ34_04065 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D IRJ34_16685 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D IRJ34_06440 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D IRJ34_06800 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D IRJ34_11795 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D IRJ34_13535 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D IRJ34_04355 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D IRJ34_14515 NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D IRJ34_02995 NosD domain-containing protein K25596 E4.2.1.178; difructose-dianhydride-III synthase [EC:4.2.1.178]
D IRJ34_15385 polysaccharide lyase 8 family protein K01727 hysA; hyaluronate lyase [EC:4.2.2.1]
D IRJ34_03030 NosD domain-containing protein K10677 E4.2.2.17; inulin fructotransferase (DFA-I-forming) [EC:4.2.2.17]
D IRJ34_16885 rhamnogalacturonan lyase K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D IRJ34_09285 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43]
D IRJ34_18425 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D IRJ34_01870 TIM barrel protein K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D IRJ34_10115 alpha/beta fold hydrolase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D IRJ34_10945 mshC; (GenBank) cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D IRJ34_17875 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D IRJ34_05050 sugar phosphate isomerase/epimerase family protein K06605 iolH; myo-inositol catabolism protein IolH
D IRJ34_16345 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
D IRJ34_01840 SIS domain-containing protein K19510 gfrF; fructoselysine-6-phosphate deglycase
C 99982 Energy metabolism
D IRJ34_04870 fdhD; (GenBank) formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D IRJ34_06525 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D IRJ34_13665 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D IRJ34_01040 dodecin family protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D IRJ34_11345 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D IRJ34_11750 nrdI; (GenBank) class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D IRJ34_08590 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D IRJ34_16010 GNAT family protein K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D IRJ34_06450 transglycosylase family protein K21688 rpfB; resuscitation-promoting factor RpfB
D IRJ34_13380 lysylphosphatidylglycerol synthase domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D IRJ34_19885 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D IRJ34_05820 DoxX family protein K15977 K15977; putative oxidoreductase
D IRJ34_20360 DoxX family protein K15977 K15977; putative oxidoreductase
D IRJ34_01375 phospholipase K06999 K06999; phospholipase/carboxylesterase
D IRJ34_07065 phospholipase K06999 K06999; phospholipase/carboxylesterase
D IRJ34_09860 serine esterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D IRJ34_04740 cold-shock protein K03704 cspA; cold shock protein
D IRJ34_04810 cold shock domain-containing protein K03704 cspA; cold shock protein
D IRJ34_05670 cold-shock protein K03704 cspA; cold shock protein
D IRJ34_12970 cold-shock protein K03704 cspA; cold shock protein
D IRJ34_05350 Tex family protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D IRJ34_12890 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D IRJ34_11970 tig; (GenBank) trigger factor K03545 tig; trigger factor
D IRJ34_00955 ureE; (GenBank) urease accessory protein UreE K03187 ureE; urease accessory protein
D IRJ34_00960 urease accessory protein UreF K03188 ureF; urease accessory protein
D IRJ34_00965 ureG; (GenBank) urease accessory protein UreG K03189 ureG; urease accessory protein
D IRJ34_00970 urease accessory protein UreD K03190 ureD; urease accessory protein
D IRJ34_13290 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D IRJ34_07425 glutaredoxin domain-containing protein K06191 nrdH; glutaredoxin-like protein NrdH
D IRJ34_11755 nrdH; (GenBank) glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D IRJ34_12270 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D IRJ34_16125 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D IRJ34_16670 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D IRJ34_14100 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D IRJ34_12275 YraN family protein K07460 yraN; putative endonuclease
D IRJ34_12265 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein
D IRJ34_11525 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D IRJ34_04230 IS30 family transposase K07482 K07482; transposase, IS30 family
D IRJ34_09240 IS30 family transposase K07482 K07482; transposase, IS30 family
D IRJ34_14010 IS30 family transposase K07482 K07482; transposase, IS30 family
D IRJ34_17490 IS30 family transposase K07482 K07482; transposase, IS30 family
D IRJ34_15985 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D IRJ34_13680 PspA/IM30 family protein K03969 pspA; phage shock protein A
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D IRJ34_12755 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D IRJ34_05695 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D IRJ34_05915 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D IRJ34_09070 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D IRJ34_09310 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D IRJ34_15350 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D IRJ34_12675 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D IRJ34_06890 CitMHS family transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D IRJ34_00410 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D IRJ34_00890 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D IRJ34_10390 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D IRJ34_05140 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D IRJ34_00265 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D IRJ34_16635 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D IRJ34_10890 lipopolysaccharide biosynthesis protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D IRJ34_20750 R3H domain-containing nucleic acid-binding protein K06346 jag; spoIIIJ-associated protein
D IRJ34_10010 AAA family ATPase K06413 spoVK; stage V sporulation protein K
C 99993 Cell motility
C 99995 Signaling proteins
D IRJ34_14035 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D IRJ34_11270 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D IRJ34_06260 PhoH family protein K07175 phoH2; PhoH-like ATPase
D IRJ34_15300 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
C 99994 Others
D IRJ34_04015 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D IRJ34_05195 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D IRJ34_05660 NAD(P)/FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
B
B 09194 Poorly characterized
C 99996 General function prediction only
D IRJ34_07590 PHP domain-containing protein K04477 ycdX; putative hydrolase
D IRJ34_03175 pqqB; (GenBank) pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D IRJ34_03165 pqqD; (GenBank) pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D IRJ34_16415 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D IRJ34_12020 globin K06886 glbN; hemoglobin
D IRJ34_06715 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D IRJ34_17990 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D IRJ34_00680 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D IRJ34_12525 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D IRJ34_10635 sufB; (GenBank) Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D IRJ34_10640 sufD; (GenBank) Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D IRJ34_05995 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D IRJ34_18370 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D IRJ34_12785 phosphoribosyltransferase family protein K07100 K07100; putative phosphoribosyl transferase
D IRJ34_09045 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D IRJ34_16405 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D IRJ34_00815 VOC family protein K04750 phnB; PhnB protein
D IRJ34_06470 VOC family protein K04750 phnB; PhnB protein
D IRJ34_11125 VOC family protein K04750 phnB; PhnB protein
D IRJ34_19590 histidine phosphatase family protein K15640 K15640; uncharacterized phosphatase
D IRJ34_03445 VTT domain-containing protein K03975 dedA; membrane-associated protein
D IRJ34_06105 DedA family protein K03975 dedA; membrane-associated protein
D IRJ34_12860 VTT domain-containing protein K03975 dedA; membrane-associated protein
D IRJ34_17850 VTT domain-containing protein K03975 dedA; membrane-associated protein
D IRJ34_03735 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D IRJ34_19370 phage holin family protein K08972 K08972; putative membrane protein
D IRJ34_00645 PH domain-containing protein K08981 K08981; putative membrane protein
D IRJ34_05955 SHOCT domain-containing protein K08982 K08982; putative membrane protein
D IRJ34_01125 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D IRJ34_18775 YchJ family protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D IRJ34_01970 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D IRJ34_14930 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D IRJ34_06245 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D IRJ34_09035 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D IRJ34_02565 CoA-binding protein K06929 K06929; uncharacterized protein
D IRJ34_02585 CoA-binding protein K06929 K06929; uncharacterized protein
D IRJ34_12315 RNA-binding protein K06960 K06960; uncharacterized protein
D IRJ34_01155 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D IRJ34_07745 DUF4081 domain-containing protein K06976 K06976; uncharacterized protein
D IRJ34_03860 VOC family protein K06996 K06996; uncharacterized protein
D IRJ34_15190 VOC family protein K06996 K06996; uncharacterized protein
D IRJ34_17475 VOC family protein K06996 K06996; uncharacterized protein
D IRJ34_17480 VOC family protein K06996 K06996; uncharacterized protein
D IRJ34_19910 VOC family protein K06996 K06996; uncharacterized protein
D IRJ34_04150 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D IRJ34_17505 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D IRJ34_12950 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D IRJ34_10305 alpha/beta family hydrolase K07020 K07020; uncharacterized protein
D IRJ34_01130 VOC family protein K07032 K07032; uncharacterized protein
D IRJ34_02245 hypothetical protein K07032 K07032; uncharacterized protein
D IRJ34_05435 VOC family protein K07032 K07032; uncharacterized protein
D IRJ34_04395 amidohydrolase family protein K07045 K07045; uncharacterized protein
D IRJ34_10660 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D IRJ34_03335 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D IRJ34_08760 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D IRJ34_11215 FAD-binding dehydrogenase K07077 K07077; uncharacterized protein
D IRJ34_03315 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D IRJ34_07775 TSUP family transporter K07090 K07090; uncharacterized protein
D IRJ34_10745 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D IRJ34_15595 PhoX family phosphatase K07093 K07093; uncharacterized protein
D IRJ34_16565 metallophosphoesterase K07098 K07098; uncharacterized protein
D IRJ34_20680 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D IRJ34_01205 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D IRJ34_18930 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D IRJ34_12125 C4-type zinc ribbon domain-containing protein K07164 K07164; uncharacterized protein
D IRJ34_20760 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D IRJ34_08425 bifunctional nuclease family protein K08999 K08999; uncharacterized protein
D IRJ34_06130 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D IRJ34_04370 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D IRJ34_13700 UPF0182 family protein K09118 K09118; uncharacterized protein
D IRJ34_03415 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D IRJ34_12700 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D IRJ34_18540 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D IRJ34_00640 PH domain-containing protein K09167 K09167; uncharacterized protein
D IRJ34_15830 DUF1349 domain-containing protein K09702 K09702; uncharacterized protein
D IRJ34_02665 DUF503 domain-containing protein K09764 K09764; uncharacterized protein
D IRJ34_07735 YciI family protein K09780 K09780; uncharacterized protein
D IRJ34_06375 hypothetical protein K09791 K09791; uncharacterized protein
D IRJ34_19040 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D IRJ34_08115 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D IRJ34_12120 peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D IRJ34_13490 crosslink repair DNA glycosylase YcaQ family protein K09927 K09927; uncharacterized protein
D IRJ34_20350 antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein
D IRJ34_11300 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein
D IRJ34_15355 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D IRJ34_05570 hypothetical protein K09968 K09968; uncharacterized protein
D IRJ34_17560 HutD family protein K09975 K09975; uncharacterized protein
D IRJ34_20410 zf-TFIIB domain-containing protein K09981 K09981; uncharacterized protein
D IRJ34_07685 ThuA domain-containing protein K09992 K09992; uncharacterized protein
D IRJ34_00895 nuclease PIN K07220 K07220; uncharacterized protein
D IRJ34_08970 DUF402 domain-containing protein K07586 ygaC; uncharacterized protein
D IRJ34_07805 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 11, 2025