+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Photorhabdus akhurstii
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ACRISPR-Cas system
B Universal Cas proteins
C B0X70_09345 subtype I-F CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D B0X70_09350 type I-F CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D B0X70_04195 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
D B0X70_04200 type I-E CRISPR-associated protein Cse1/CasA K19123 casA; CRISPR system Cascade subunit CasA
D B0X70_04205 type I-E CRISPR-associated protein Cse2/CasB K19046 casB; CRISPR system Cascade subunit CasB
D B0X70_04210 type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC
D B0X70_04215 type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD
D B0X70_04220 type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
D B0X70_09355 type I-F CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1
D B0X70_09360 type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2
D B0X70_09365 type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3
D B0X70_09370 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C B0X70_02730 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C B0X70_02740 restriction endonuclease K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C B0X70_02745 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D B0X70_17505 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D B0X70_24490 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D B0X70_00405 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D B0X70_21815 SAM-dependent methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D B0X70_22450 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D B0X70_22515 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D B0X70_24480 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
D B0X70_13325 protein HokA K18920 hokA; protein HokA
D B0X70_13320 small toxic polypeptide K18919 hokC_D; protein HokC/D
D B0X70_13335 hypothetical protein K18919 hokC_D; protein HokC/D
D B0X70_14760 hypothetical protein K18919 hokC_D; protein HokC/D
C SymE-SymR
D B0X70_16015 hypothetical protein K19048 symE; toxic protein SymE
D B0X70_01575 hypothetical protein K19048 symE; toxic protein SymE
D B0X70_01620 hypothetical protein K19048 symE; toxic protein SymE
D B0X70_05745 hypothetical protein K19048 symE; toxic protein SymE
D B0X70_05785 hypothetical protein K19048 symE; toxic protein SymE
D B0X70_06865 hypothetical protein K19048 symE; toxic protein SymE
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D B0X70_11445 growth inhibitor PemK K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D B0X70_12175 toxin MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D B0X70_12170 PbsX family transcriptional regulator K07172 mazE; antitoxin MazE
D B0X70_05035 AbrB family transcriptional regulator K07172 mazE; antitoxin MazE
C ChpB-ChpS
C YhaV-PrlF
D B0X70_19735 regulator K19156 prlF; antitoxin PrlF
C RelE/StbE-RelB/StbD
D B0X70_10930 addiction module toxin RelE K06218 relE; mRNA interferase RelE/StbE
D B0X70_10925 plasmid stabilization protein K18923 stbD; antitoxin StbD
D B0X70_11600 antitoxin K18923 stbD; antitoxin StbD
D B0X70_16235 antitoxin of toxin-antitoxin stability system K18923 stbD; antitoxin StbD
C YafQ-dinJ
D B0X70_06785 YafQ family addiction module toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D B0X70_18975 hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D B0X70_06780 RelB/DinJ family addiction module antitoxin K07473 dinJ; DNA-damage-inducible protein J
C YoeB-YefM
D B0X70_11670 toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D B0X70_08570 hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D B0X70_11675 antitoxin K19159 yefM; antitoxin YefM
D B0X70_16610 prevent-host-death family protein K19159 yefM; antitoxin YefM
D B0X70_08540 prevent-host-death family protein K19159 yefM; antitoxin YefM
C HipA-HipB
D B0X70_12345 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D B0X70_19620 serine/threonine protein kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D B0X70_19625 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
C HicA-HicB
D B0X70_20335 mRNA interferase K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D B0X70_01215 mRNA interferase K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D B0X70_20330 antitoxin K18843 hicB; antitoxin HicB
D B0X70_01220 hypothetical protein K18843 hicB; antitoxin HicB
C YafO-YafN
D B0X70_15655 toxin YafO K19160 yafO; mRNA interferase YafO [EC:3.1.-.-]
C Hha-TomB
D B0X70_19185 transcriptional regulator K05839 hha; haemolysin expression modulating protein
C PspC-PspB
D B0X70_13115 envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D B0X70_13120 envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
C CcdB-CcdA
D B0X70_22425 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB
D B0X70_02850 ccdB family protein K19163 ccdB; toxin CcdB
D B0X70_11690 antitoxin K19164 ccdA; antitoxin CcdA
D B0X70_22420 antitoxin K19164 ccdA; antitoxin CcdA
D B0X70_02855 hypothetical protein K19164 ccdA; antitoxin CcdA
C ParE-ParD
D B0X70_23135 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D B0X70_24270 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D B0X70_01110 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D B0X70_06090 plasmid stabilization protein ParE K19092 parE1_3_4; toxin ParE1/3/4
D B0X70_11520 antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D B0X70_24265 antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
D B0X70_11535 death-on-curing family protein K07341 doc; death on curing protein
D B0X70_11530 prevent-host-death family protein K19165 phd; antitoxin Phd
C HigB-HigA
D B0X70_00535 cytoplasmic protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D B0X70_09440 toxin K07334 higB-1; toxin HigB-1
D B0X70_10025 hypothetical protein K07334 higB-1; toxin HigB-1
D B0X70_04110 Killer protein K07334 higB-1; toxin HigB-1
D B0X70_00530 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D B0X70_03620 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D B0X70_09445 transcriptional regulator K21498 higA-1; antitoxin HigA-1
D B0X70_10755 transcriptional regulator K21498 higA-1; antitoxin HigA-1
D B0X70_15285 transcriptional regulator K21498 higA-1; antitoxin HigA-1
D B0X70_01075 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D B0X70_01080 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D B0X70_04115 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D B0X70_04670 transcriptional regulator K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
D B0X70_17095 antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
C VapC-VapB
D B0X70_10525 VapC toxin family PIN domain ribonuclease K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D B0X70_04855 VapC toxin family PIN domain ribonuclease K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D B0X70_10520 antitoxin K18829 mvpT; antitoxin VapB
D B0X70_20530 AbrB family transcriptional regulator K18829 mvpT; antitoxin VapB
D B0X70_04850 DNA-binding protein K18829 mvpT; antitoxin VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
D B0X70_11810 VapC toxin family PIN domain ribonuclease K07062 fitB; toxin FitB [EC:3.1.-.-]
D B0X70_03165 VapC toxin family PIN domain ribonuclease K07062 fitB; toxin FitB [EC:3.1.-.-]
D B0X70_03170 plasmid stabilization protein K21495 fitA; antitoxin FitA
C BC_0920-BC_0921
C Type II TA system related factors
D B0X70_09475 bssS; transcriptional regulator K12148 bssS; biofilm regulator BssS
D B0X70_18385 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D B0X70_20700 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D B0X70_19765 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D B0X70_07130 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
D B0X70_17965 hypothetical protein K19168 cptA; toxin CptA
D B0X70_17970 hypothetical protein K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C B0X70_15910 nitrogen fixation protein NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C B0X70_16920 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C B0X70_23625 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C B0X70_04985 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023