+E Ribosome biogenesis KO
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Ribosome Biogenesis - Pteropus alecto (black flying fox)
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 102892896 FBLL1; rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D 102897565 FBL; rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D 102880189 NOP56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 102881323 NOP58; nucleolar protein 58 isoform X1 K14565 NOP58; nucleolar protein 58
D 102889833 SNU13; NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
D 102882577 ZNHIT6; box C/D snoRNA protein 1 isoform X1 K27833 ZNHIT6; box C/D snoRNA protein 1
C Box H/ACA snoRNPs
D 102887442 DKC1; H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 102890912 GAR1; H/ACA ribonucleoprotein complex subunit 1 isoform X1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D 102885789 NHP2; H/ACA ribonucleoprotein complex subunit 2 K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
D 102883760 NOP10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D 102894005 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1
D 102897602 SHQ1; LOW QUALITY PROTEIN: protein SHQ1 homolog K14764 SHQ1; protein SHQ1
B 90S particles
C U3 small nucleolar RNA-associated proteins
D 102885869 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D 102886983 LOW QUALITY PROTEIN: U3 small nucleolar ribonucleoprotein protein IMP3-like K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D 102887238 LOW QUALITY PROTEIN: U3 small nucleolar ribonucleoprotein protein IMP3-like K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D 102888862 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D 102887143 MPHOSPH10; LOW QUALITY PROTEIN: U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10
D 102879658 NGDN; neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5
D 102885943 RRP7A; ribosomal RNA-processing protein 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7
D 102878852 PWP2; periodic tryptophan protein 2 homolog isoform X1 K14558 PWP2; periodic tryptophan protein 2
D 102894170 NOP14; nucleolar protein 14 isoform X1 K14766 NOP14; nucleolar protein 14
D 102888348 UTP3; something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D 102887664 UTP4; U3 small nucleolar RNA-associated protein 4 homolog K14548 UTP4; U3 small nucleolar RNA-associated protein 4
D 102882387 WDR43; WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5
D 102887972 UTP6; U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6
D 102887734 WDR46; WD repeat-containing protein 46 K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D 102898715 HEATR1; LOW QUALITY PROTEIN: HEAT repeat-containing protein 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10
D 102893547 UTP11; probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11
D 102890755 WDR3; WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12
D 102881906 TBL3; transducin beta-like protein 3 isoform X1 K14555 UTP13; U3 small nucleolar RNA-associated protein 13
D 102888898 UTP14A; LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 14 homolog A K14567 UTP14; U3 small nucleolar RNA-associated protein 14
D 102888169 UTP15; U3 small nucleolar RNA-associated protein 15 homolog K14549 UTP15; U3 small nucleolar RNA-associated protein 15
D 102893647 NOL7; nucleolar protein 7 K27687 NOL7; U3 small nucleolar RNA-associated protein NOL7
D 102882340 WDR75; WD repeat-containing protein 75 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
D 102896493 UTP18; U3 small nucleolar RNA-associated protein 18 homolog isoform X1 K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D 102892251 NOC4L; nucleolar complex protein 4 homolog K14771 NOC4; U3 small nucleolar RNA-associated protein 19
D 102893994 UTP20; small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20
D 102878824 WDR36; WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21
D 102898594 NOL6; nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22
D 102883070 UTP23; rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23
D 102888793 FCF1; rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D 102898412 UTP25; digestive organ expansion factor homolog isoform X2 K14774 UTP25; U3 small nucleolar RNA-associated protein 25
D 102880005 RSL1D1; ribosomal L1 domain-containing protein 1 K14775 UTP30; ribosome biogenesis protein UTP30
C Helicases
D 102878402 DDX10; probable ATP-dependent RNA helicase DDX10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
D 102882172 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 102880762 DDX47; probable ATP-dependent RNA helicase DDX47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D 102886361 DDX49; probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
D 102897076 DDX52; probable ATP-dependent RNA helicase DDX52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
D 102879016 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 102894643 DHX37; probable ATP-dependent RNA helicase DHX37 isoform X1 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
D 102885580 EIF4A3; eukaryotic initiation factor 4A-III isoform X1 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
C GTPase
D 102877881 BMS1; ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1
C RNase
D 102895564 DROSHA; ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D 102885771 REXO4; RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D 102880569 DBR1; lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
C Kinase
D 102883511 CSNK2A1; casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 102893812 CSNK2A2; casein kinase II subunit alpha' K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 102884366 CSNK2B; casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta
C Other 90S particles
D 102895295 AATF; protein AATF isoform X1 K14782 AATF; protein AATF/BFR2
D 102891066 CMSS1; protein CMSS1 isoform X2 K14784 CMS1; protein CMS1
D 102896616 EMG1; ribosomal RNA small subunit methyltransferase NEP1 isoform X1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D 102893700 ABT1; activator of basal transcription 1 K14785 ESF2; ESF2/ABP1 family protein
D 102894205 KRI1; protein KRI1 homolog isoform X1 K14786 KRI1; protein KRI1
D 102894861 KRR1; KRR1 small subunit processome component homolog isoform X1 K06961 KRR1; ribosomal RNA assembly protein
D 102881629 RBM19; probable RNA-binding protein 19 isoform X2 K14787 MRD1; multiple RNA-binding domain-containing protein 1
D 102882792 NAT10; RNA cytidine acetyltransferase K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-]
D 102896498 NCL; nucleolin K11294 NCL; nucleolin
D 102896519 NOL10; nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2
D 102891293 NOP9; nucleolar protein 9 K14790 NOP9; nucleolar protein 9
D 102881772 PINX1; PIN2/TERF1-interacting telomerase inhibitor 1 isoform X1 K11135 PINX1; Pin2-interacting protein X1
D 102883064 PWP1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1
D 102886678 RCL1; RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein
D 102883594 PDCD11; protein RRP5 homolog K14792 RRP5; rRNA biogenesis protein RRP5
D 102883974 RRP9; U3 small nucleolar RNA-interacting protein 2 K14793 RRP9; ribosomal RNA-processing protein 9
D 102896079 RRP12; RRP12-like protein isoform X2 K14794 RRP12; ribosomal RNA-processing protein 12
D 102897504 RRP36; ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36
D 102889047 TCOF1; treacle protein isoform X2 K14562 TCOF1; Treacher Collins syndrome protein
D 102894585 DCAF13; LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13
B Pre-40S particles
C Kinases
D 102879738 RIOK1; serine/threonine-protein kinase RIO1 isoform X1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D 102892675 RIOK2; serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C Export and cytoplasmic maturation factors
D 102880471 DIMT1; probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
D 102891873 BUD23; probable 18S rRNA (guanine-N(7))-methyltransferase isoform X1 K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309]
D 102878594 METTL5; methyltransferase-like protein 5 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5
D 102882126 BYSL; bystin K14797 ENP1; essential nuclear protein 1
D 102882153 LTV1; protein LTV1 homolog K14798 LTV1; protein LTV1
D 102889397 NOB1; RNA-binding protein NOB1 isoform X2 K11883 NOB1; RNA-binding protein NOB1
D 102894730 PNO1; RNA-binding protein PNO1 K11884 PNO1; RNA-binding protein PNO1
D 102893000 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 102881715 AK6; adenylate kinase isoenzyme 6 isoform X2 K18532 AK6; adenylate kinase [EC:2.7.4.3]
D 102891424 TSR1; pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1
D 102894280 TSR2; pre-rRNA-processing protein TSR2 homolog K14800 TSR2; pre-rRNA-processing protein TSR2
D 102889574 TSR3; ribosome biogenesis protein TSR3 homolog K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D 102895730 PDCD2L; programmed cell death protein 2-like isoform X4 K14801 TSR4; pre-rRNA-processing protein TSR4
D 102893168 PDCD2; programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4
D 102882328 RPS19BP1; active regulator of SIRT1 K26536 RPS19BP1; active regulator of SIRT1
D 102881186 XPO1; exportin-1 isoform X1 K14290 XPO1; exportin-1
D 102894799 KPNB1; importin subunit beta-1 K14293 KPNB1; importin subunit beta-1
D 102885999 TNPO1; transportin-1 isoform X1 K18752 TNPO1; transportin-1
D 102894748 IPO4; importin-4 K20221 IPO4; importin-4
D 102895076 IPO5; importin-5 K20222 IPO5; importin-5
D 102885552 IPO7; importin-7 isoform X1 K20223 IPO7; importin-7
D 102894351 IPO9; importin-9 K20224 IPO9; importin-9
C Other pre-40S particles
D 102894916 ATP8A2; phospholipid-transporting ATPase IB K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D 102882432 ATP8A1; phospholipid-transporting ATPase IA isoform X6 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D 102897375 EIF3J; eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J
D 102879810 ABCE1; ATP-binding cassette sub-family E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
B Pre-60S particles
C Helicases
D 102895749 DDX5; probable ATP-dependent RNA helicase DDX5 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 102882172 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 102896193 DDX21; nucleolar RNA helicase 2 K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7]
D 102878961 DDX24; LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
D 102894186 DDX27; probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D 102878336 DDX31; probable ATP-dependent RNA helicase DDX31 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D 102892507 DDX51; ATP-dependent RNA helicase DDX51 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
D 102879823 DDX54; ATP-dependent RNA helicase DDX54 isoform X1 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
D 102896935 DDX55; ATP-dependent RNA helicase DDX55 isoform X2 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
D 102884823 DDX56; probable ATP-dependent RNA helicase DDX56 isoform X1 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
D 102879653 MTREX; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C GTPases
D 102892302 GNL3L; guanine nucleotide-binding protein-like 3-like protein isoform X1 K14538 NUG1; nuclear GTP-binding protein
D 102895680 GNL3; guanine nucleotide-binding protein-like 3 K14538 NUG1; nuclear GTP-binding protein
D 102896907 GNL2; nucleolar GTP-binding protein 2 K14537 NUG2; nuclear GTP-binding protein
D 102891636 GTPBP4; nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein
D 102888955 LSG1; large subunit GTPase 1 homolog K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-]
D 102894107 EFL1; elongation factor-like GTPase 1 isoform X1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-]
C RNases
D 102880855 REXO2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-]
D 102878649 REXO5; RNA exonuclease 5 K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 102892636 REXO1; RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 102889090 XRN1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D 102893608 XRN2; 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D RNase MRP
E 102897047 POP1; ribonucleases P/MRP protein subunit POP1 isoform X2 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
E 102898914 POP4; ribonuclease P protein subunit p29 isoform X1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E 102890057 POP5; ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
E 102898071 RPP30; ribonuclease P protein subunit p30 isoform X1 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
E 102883415 POP7; ribonuclease P protein subunit p20 isoform X2 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
E 102889183 RPP25; ribonuclease P protein subunit p25 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
E 102893755 RPP25L; ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
E 102877963 RPP38; ribonuclease P protein subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
E 102881700 RPP40; ribonuclease P protein subunit p40 isoform X1 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
C Kinases
D 102892679 NOL9; polynucleotide 5'-hydroxyl-kinase NOL9 isoform X1 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
C Export and cytoplasmic maturation factors
D 102898785 ABCF2; ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2
D 102888601 DNAJC21; dnaJ homolog subfamily C member 21 isoform X1 K09506 DNAJA5; DnaJ homolog subfamily A member 5
D 102879949 EIF6; eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6
D 102880048 HSPA1B; heat shock 70 kDa protein 1B K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 102880632 heat shock 70 kDa protein 1-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 102893956 HSPA8; heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 112469030 heat shock 70 kDa protein 1-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 102880428 HSPA2; LOW QUALITY PROTEIN: heat shock-related 70 kDa protein 2 K26598 HSPA2; heat shock 70kDa protein 2
D 102891296 MRTO4; mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4
D 102884986 NMD3; 60S ribosomal export protein NMD3 isoform X1 K07562 NMD3; 60S ribosomal export protein NMD3
D 102888158 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor
D 102898356 NXF3; nuclear RNA export factor 3 K14284 NXF; nuclear RNA export factor
D 102887246 NXF1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
D 102882095 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor
D 102897103 NXT1; NTF2-related export protein 1 K14285 NXT1_2; NTF2-related export protein 1/2
D 102879117 NTF2-related export protein 2 K14285 NXT1_2; NTF2-related export protein 1/2
D 102893000 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 102898403 ZNF622; zinc finger protein 622 K14816 REI1; pre-60S factor REI1
D 102883938 SBDS; ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1
D 102884175 SPATA5; spermatogenesis-associated protein 5 K14575 AFG2; AAA family ATPase
D 102894015 SPATA5L1; spermatogenesis-associated protein 5-like protein 1 isoform X1 K26051 SPATA5L1; ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10]
D 102880563 CINP; cyclin-dependent kinase 2-interacting protein K26052 CINP; cyclin-dependent kinase 2-interacting protein
D 102896399 CUNH1orf109; uncharacterized protein C1orf109 homolog isoform X2 K26053 C1ORF109; ribosome biogenesis protein C1orf109
D 102881186 XPO1; exportin-1 isoform X1 K14290 XPO1; exportin-1
D 102894799 KPNB1; importin subunit beta-1 K14293 KPNB1; importin subunit beta-1
D 102885999 TNPO1; transportin-1 isoform X1 K18752 TNPO1; transportin-1
D 102894748 IPO4; importin-4 K20221 IPO4; importin-4
D 102895076 IPO5; importin-5 K20222 IPO5; importin-5
D 102885552 IPO7; importin-7 isoform X1 K20223 IPO7; importin-7
D 102894351 IPO9; importin-9 K20224 IPO9; importin-9
D 102878722 DUSP12; dual specificity protein phosphatase 12 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
C 5-FMC complex
D 102878067 TEX10; testis-expressed protein 10 isoform X1 K14827 IPI1; pre-rRNA-processing protein IPI1
D 102898541 WDR18; WD repeat-containing protein 18 K14829 IPI3; pre-rRNA-processing protein IPI3
D 102894675 LAS1L; ribosomal biogenesis protein LAS1L isoform X1 K16912 LAS1; ribosomal biogenesis protein LAS1
D 102896736 PELP1; proline-, glutamic acid- and leucine-rich protein 1 isoform X1 K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1
D 102887286 SENP3; sentrin-specific protease 3 isoform X1 K08593 SENP3; sentrin-specific protease 3 [EC:3.4.22.68]
C Ribosome quality control proteins
D 102879638 LTN1; E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
D 102885044 TCF25; LOW QUALITY PROTEIN: transcription factor 25 K24970 TCF25; transcription factor 25
D 102883261 NEMF; nuclear export mediator factor NEMF K24971 NEMF; nuclear export mediator factor NEMF
D 102890980 VCP; transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D 102890650 NPLOC4; nuclear protein localization protein 4 homolog K14015 NPLOC4; nuclear protein localization protein 4
D 102892106 UFD1; ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1 K14016 UFD1; ubiquitin fusion degradation protein 1
D 102885989 PTRHD1; putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29]
D 102879138 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 isoform X1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1
C Other pre-60S particles
D 102888352 BRIX1; ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1
D 102893375 ZNF593; zinc finger protein 593 K14821 BUD20; bud site selection protein 20
D 102878642 CCDC86; coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1
D 102879156 EBNA1BP2; probable rRNA-processing protein EBP2 K14823 EBP2; rRNA-processing protein EBP2
D 102886744 BOP1; ribosome biogenesis protein BOP1 K14824 ERB1; ribosome biogenesis protein ERB1
D 102892457 TMED5; transmembrane emp24 domain-containing protein 5 K14825 TMED5; p24 family protein gamma-2
D 102897824 PAK1IP1; p21-activated protein kinase-interacting protein 1 isoform X1 K14830 MAK11; protein MAK11
D 102884757 MAK16; protein MAK16 homolog K14831 MAK16; protein MAK16
D 102891042 CEBPZ; CCAAT/enhancer-binding protein zeta isoform X1 K14832 MAK21; ribosome biogenesis protein MAK21
D 102883709 MDN1; midasin isoform X2 K14572 MDN1; midasin
D 102888156 NIP7; 60S ribosome subunit biogenesis protein NIP7 homolog isoform X1 K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D 102878265 NOC2L; nucleolar complex protein 2 homolog isoform X1 K14833 NOC2; nucleolar complex protein 2
D 102892567 NOC3L; nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3
D 102888909 NOP2; probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X2 K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310]
D 102896688 RBM28; RNA-binding protein 28 K14573 NOP4; nucleolar protein 4
D 102878358 NOL8; nucleolar protein 8 isoform X2 K14836 NOP8; nucleolar protein 8
D 102896730 RBM34; RNA-binding protein 34 K14837 NOP12; nucleolar protein 12
D 102898040 NIFK; MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15
D 102890538 NOP53; ribosome biogenesis protein NOP53 K14840 NOP53; nucleolar protein 53
D 102886736 WDR74; WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1
D 102889150 NSA2; ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2
D 102892144 PES1; pescadillo homolog K14843 PES1; pescadillo
D 102884098 PUM3; pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6
D 102883064 PWP1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1
D 102898881 DXO; decapping and exoribonuclease protein isoform X1 K14845 RAI1; RAT1-interacting protein
D 102887644 RIOX1; LOW QUALITY PROTEIN: ribosomal oxygenase 1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
D 102881417 RIOX2; ribosomal oxygenase 2 isoform X3 K21760 RIOX2; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine9 demethylase [EC:1.14.11.79 1.14.11.66]
D 102896803 NVL; nuclear valosin-containing protein-like isoform X1 K14571 RIX7; ribosome biogenesis ATPase
D 102879189 RPF1; ribosome production factor 1 K14846 RPF1; ribosome production factor 1
D 102895636 RPF2; LOW QUALITY PROTEIN: ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2
D 102888542 GRWD1; glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1
D 102893781 RRP1; ribosomal RNA processing protein 1 homolog A K14849 RRP1; ribosomal RNA-processing protein 1
D 102892447 RRP1B; ribosomal RNA processing protein 1 homolog B K14849 RRP1; ribosomal RNA-processing protein 1
D 102887263 RRP8; ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287]
D 102896079 RRP12; RRP12-like protein isoform X2 K14794 RRP12; ribosomal RNA-processing protein 12
D 102883480 NOL12; nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17
D 102889034 RRS1; ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis
D 102895809 NLE1; notchless protein homolog 1 isoform X1 K14855 RSA4; ribosome assembly protein 4
D 102881182 SDAD1; protein SDA1 homolog K14856 SDA1; protein SDA1
D 102877739 FTSJ3; pre-rRNA processing protein FTSJ3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
D 102882771 LOW QUALITY PROTEIN: uncharacterized protein LOC102882771 K14859 SSF1_2; ribosome biogenesis protein SSF1/2
D 102895422 TMA16; translation machinery-associated protein 16 K14860 TMA16; translation machinery-associated protein 16
D 102897792 URB1; nucleolar pre-ribosomal-associated protein 1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1
D 102891961 URB2; unhealthy ribosome biogenesis protein 2 homolog K14862 URB2; nucleolar pre-ribosomal-associated protein 2
D 102882503 WDR12; ribosome biogenesis protein WDR12 K14863 WDR12; ribosome biogenesis protein
D 102897529 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1
D 102893298 ZNHIT3; zinc finger HIT domain-containing protein 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3
B Other ribosome biogenesis factors
C 102879086 BCCIP; BRCA2 and CDKN1A-interacting protein K15262 BCP1; protein BCP1
C 102887443 LYAR; cell growth-regulating nucleolar protein K15263 LYER; cell growth-regulating nucleolar protein
C 112469028 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 isoform X1 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
C 102893519 NSUN5; probable 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C 102884751 TFB1M; dimethyladenosine transferase 1, mitochondrial isoform X1 K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-]
C 102894540 MRM1; rRNA methyltransferase 1, mitochondrial isoform X2 K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
C 102892508 BMT2; S-adenosylmethionine sensor upstream of mTORC1 K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286]
C 102883787 MRM3; rRNA methyltransferase 3, mitochondrial isoform X1 K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-]
C 102878253 ZCCHC4; zinc finger CCHC domain-containing protein 4 isoform X2 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-]
C 102886607 DHX33; LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6]
C 102885577 IGHMBP2; DNA-binding protein SMUBP-2 isoform X2 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
C 102881606 ISG20; interferon-stimulated gene 20 kDa protein isoform X2 K12579 ISG20; interferon-stimulated gene 20 kDa protein [EC:3.1.13.1]
C 102881074 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 K18329 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 [EC:3.1.-.-]
C 102893335 KDM8; jmjC domain-containing protein 5 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-]
C 102885460 PHF6; PHD finger protein 6 isoform X1 K23310 PHF6; PHD finger protein 6
C 102880389 SLFN14; protein SLFN14 K24445 SLFN14; protein SLFN14 [EC:3.1.-.-]
C 102897324 ERAL1; GTPase Era, mitochondrial isoform X1 K03595 era; GTPase
C 102886503 CUNH12orf45; uncharacterized protein C12orf45 homolog K26142 NOPCHAP1; NOP protein chaperone 1
C 102895829 PA2G4; proliferation-associated protein 2G4 K26736 PA2G4; ERBB-3 binding protein
C 102896869 MTG1; mitochondrial ribosome-associated GTPase 1 isoform X1 K19828 MTG1; mitochondrial GTPase 1
C 102886198 MTG2; mitochondrial ribosome-associated GTPase 2 isoform X1 K03979 obgE; GTPase [EC:3.6.5.-]
C 102879365 NOA1; nitric oxide-associated protein 1 K19832 NOA1; nitric oxide-associated protein 1
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 102880189 NOP56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 102884257 RPL7A; 60S ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
C Box H/ACA snoRNPs
D 102887442 DKC1; H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 102883760 NOP10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
B rRNA transcription factors
B rRNA modification factors
C 16S rRNA modification factors
C 23S rRNA modification factors
D 102896960 MRM2; rRNA methyltransferase 2, mitochondrial K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
B ribosomal protein modification factors
B rRNA processing factors
C 102895564 DROSHA; ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
C 102897324 ERAL1; GTPase Era, mitochondrial isoform X1 K03595 era; GTPase
C 102886198 MTG2; mitochondrial ribosome-associated GTPase 2 isoform X1 K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C 102895044 YRDC; yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
D 112473427 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 112473425 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 112479368 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 112483049 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 112471371 small nucleolar SNORD12/SNORD106 K14907 SNORD12; small nucleolar RNA SNORD12
D 112471370 small nucleolar SNORD12/SNORD106 K14907 SNORD12; small nucleolar RNA SNORD12
D 112471372 small nucleolar SNORD12/SNORD106 K14907 SNORD12; small nucleolar RNA SNORD12
D 112483481 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112480449 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112486081 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112471377 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112482805 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112471721 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112479440 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112471378 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112475178 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112474422 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112479216 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112483093 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112475179 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112486082 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112480551 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112483549 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112484254 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112476376 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112469917 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 112473525 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14
D 112479424 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14
D 112474664 small nucleolar RNA SNORD15 K14921 SNORD15; small nucleolar RNA SNORD15
D 112474663 small nucleolar RNA SNORD15 K14921 SNORD15; small nucleolar RNA SNORD15
D 112471369 small nucleolar RNA SNORD17 K26292 SNORD17; small nucleolar RNA SNORD17
D 112469905 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18
D 112469907 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18
D 112469906 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18
D 112486074 small nucleolar RNA SNORD21 K26293 SNORD21; small nucleolar RNA SNORD21
D 112479284 small nucleolar RNA SNORD22 K26294 SNORD22; small nucleolar RNA SNORD22
D 112479285 small nucleolar RNA SNORD22 K26294 SNORD22; small nucleolar RNA SNORD22
D 112482108 small nucleolar RNA SNORD23 K26295 SNORD23; small nucleolar RNA SNORD23
D 112484840 small nucleolar RNA SNORD24 K14867 SNORD24; small nucleolar RNA SNORD24
D 112476533 small nucleolar RNA SNORD24 K14867 SNORD24; small nucleolar RNA SNORD24
D 112482060 small nucleolar RNA Z195/SNORD33/SNORD32 family K14881 SNORD32_33; small nucleolar RNA SNORD32/33
D 112482059 small nucleolar RNA Z195/SNORD33/SNORD32 family K14881 SNORD32_33; small nucleolar RNA SNORD32/33
D 112482064 small nucleolar RNA SNORD34 K14888 SNORD34; small nucleolar RNA SNORD34
D 112482097 small nucleolar RNA SNORD35 K14899 SNORD35; small nucleolar RNA SNORD35
D 112482086 small nucleolar RNA SNORD35 K14899 SNORD35; small nucleolar RNA SNORD35
D 112484837 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36
D 112484839 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36
D 112484838 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36
D 112479375 small nucleolar RNA SNORD38 K14887 SNORD38; small nucleolar RNA SNORD38
D 112479374 small nucleolar RNA SNORD38 K14887 SNORD38; small nucleolar RNA SNORD38
D 112477453 small nucleolar RNA SNORD59 K14880 SNORD59; small nucleolar RNA SNORD59
D 112477454 small nucleolar RNA SNORD59 K14880 SNORD59; small nucleolar RNA SNORD59
D 112481654 small nucleolar RNA SNORD60 K14875 SNORD60; small nucleolar RNA SNORD60
D 112484842 small nucleolar RNA SNORD62 K14919 SNORD62; small nucleolar RNA SNORD62
D 112484843 small nucleolar RNA SNORD62 K14919 SNORD62; small nucleolar RNA SNORD62
D 112482125 small nucleolar RNA SNORD88 K14917 SNORD88; small nucleolar RNA SNORD88
D 112482119 small nucleolar RNA SNORD88 K14917 SNORD88; small nucleolar RNA SNORD88
D 112480145 small nucleolar RNA SNORD104 K14904 SNORD104; small nucleolar RNA SNORD104
D 112483785 U8 small nucleolar RNA K27110 SNORD118; small nucleolar RNA SNORD118
D 112471442 U8 small nucleolar RNA K27110 SNORD118; small nucleolar RNA SNORD118
D 112472543 U8 small nucleolar RNA K27110 SNORD118; small nucleolar RNA SNORD118
D 112471443 U8 small nucleolar RNA K27110 SNORD118; small nucleolar RNA SNORD118
C SnoRNAs act as guides for 2'-O-ribose methylation
D 112480144 small nucleolar RNA R38 K14869 SNORD1; small nucleolar RNA SNORD1
D 112474254 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2
D 112478846 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2
D 112470448 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2
D 112479975 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2
D 112482446 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2
D 112473446 small nucleolar RNA Z17 K27197 SNORD4; small nucleolar RNA SNORD4
D 112473447 small nucleolar RNA Z17 K27197 SNORD4; small nucleolar RNA SNORD4
D 112476262 small nucleolar RNA SNORD5 K27198 SNORD5; small nucleolar RNA SNORD5
D 112476252 small nucleolar RNA Z40 K27199 SNORD6; small nucleolar RNA SNORD6
D 112470445 small nucleolar RNA SNORD11B K14896 SNORD11; small nucleolar RNA SNORD11
D 112470444 small nucleolar RNA SNORD11 K14896 SNORD11; small nucleolar RNA SNORD11
D 112469908 small nucleolar RNA SNORD16 K14906 SNORD16; small nucleolar RNA SNORD16
D 112484493 small nucleolar RNA SNORD19 K14934 SNORD19; small nucleolar RNA SNORD19
D 112484494 small nucleolar RNA SNORD19 K14934 SNORD19; small nucleolar RNA SNORD19
D 112484498 small nucleolar RNA SNORD19B K14934 SNORD19; small nucleolar RNA SNORD19
D 112475456 small nucleolar RNA SNORD20 K27207 SNORD20; small nucleolar RNA SNORD20
D 112479281 small nucleolar RNA SNORD26 K26296 SNORD26; small nucleolar RNA SNORD26
D 112479280 small nucleolar RNA SNORD27 K14900 SNORD27; small nucleolar RNA SNORD27
D 112479279 small nucleolar RNA SNORD28 K26297 SNORD28; small nucleolar RNA SNORD28
D 112479278 small nucleolar RNA SNORD29 K14895 SNORD29; small nucleolar RNA SNORD29
D 112479282 small nucleolar RNA SNORD30 K26298 SNORD30; small nucleolar RNA SNORD30
D 112479283 small nucleolar RNA SNORD31 K14893 SNORD31; small nucleolar RNA SNORD31
D 112476111 small nucleolar RNA SNORD37 K27210 SNORD37; small nucleolar RNA SNORD37
D 112485398 small nucleolar RNA SNORD41 K26299 SNORD41; small nucleolar RNA SNORD41
D 112473440 small nucleolar RNA SNORD42 K14892 SNORD42; small nucleolar RNA SNORD42
D 112473441 small nucleolar RNA SNORD42 K14892 SNORD42; small nucleolar RNA SNORD42
D 112484249 small nucleolar RNA SNORD43 K26300 SNORD43; small nucleolar RNA SNORD43
D 112476538 small nucleolar RNA SNORD44 K26301 SNORD44; small nucleolar RNA SNORD44
D 112486076 small nucleolar RNA SNORD45 K26302 SNORD45; small nucleolar RNA SNORD45
D 112486077 small nucleolar RNA SNORD45 K26302 SNORD45; small nucleolar RNA SNORD45
D 112486078 small nucleolar RNA SNORD45 K26302 SNORD45; small nucleolar RNA SNORD45
D 112479376 small nucleolar RNA SNORD46 K14889 SNORD46; small nucleolar RNA SNORD46
D 112476536 small nucleolar RNA SNORD47 K14920 SNORD47; small nucleolar RNA SNORD47
D 112479007 small nucleolar RNA SNORD48 K26303 SNORD48; small nucleolar RNA SNORD48
D 112477055 small nucleolar RNA SNORD49 K26304 SNORD49; small nucleolar RNA SNORD49
D 112477056 small nucleolar RNA SNORD49 K26304 SNORD49; small nucleolar RNA SNORD49
D 112474668 small nucleolar RNA SNORD50 K26305 SNORD50; small nucleolar RNA SNORD50
D 112474669 small nucleolar RNA SNORD50 K26305 SNORD50; small nucleolar RNA SNORD50
D 112470437 small nucleolar RNA SNORD51 K14885 SNORD51; small nucleolar RNA SNORD51
D 112479000 small nucleolar RNA SNORD52 K14884 SNORD52; small nucleolar RNA SNORD52
D 112478644 small nucleolar RNA SNORD53/SNORD92 K26306 SNORD53_92; small nucleolar RNA SNORD53/92
D 112478646 small nucleolar RNA SNORD53/SNORD92 K26306 SNORD53_92; small nucleolar RNA SNORD53/92
D 112478645 small nucleolar RNA SNORD53/SNORD92 K26306 SNORD53_92; small nucleolar RNA SNORD53/92
D 112472731 small nucleolar RNA U54 K26307 SNORD54; small nucleolar RNA SNORD54
D 112479373 small nucleolar RNA SNORD55/SNORD39 K26308 SNORD55; small nucleolar RNA SNORD55
D 112471366 small nucleolar RNA SNORD56 K26309 SNORD56; small nucleolar RNA SNORD56
D 112471365 small nucleolar RNA SNORD57 K14877 SNORD57; small nucleolar RNA SNORD57
D 112469494 small nucleolar RNA SNORD58 K26310 SNORD58; small nucleolar RNA SNORD58
D 112469493 small nucleolar RNA SNORD58 K26310 SNORD58; small nucleolar RNA SNORD58
D 112469495 small nucleolar RNA SNORD58 K26310 SNORD58; small nucleolar RNA SNORD58
D 112469492 small nucleolar RNA SNORD58 K26310 SNORD58; small nucleolar RNA SNORD58
D 112472871 small nucleolar RNA SNORD61 K26311 SNORD61; small nucleolar RNA SNORD61
D 112472071 small nucleolar RNA SNORD63 K27111 SNORD63; small nucleolar RNA SNORD63
D 112472069 small nucleolar RNA SNORD63 K27111 SNORD63; small nucleolar RNA SNORD63
D 112477057 small nucleolar RNA SNORD65 K14903 SNORD65; small nucleolar RNA SNORD65
D 112474248 small nucleolar RNA SNORD66 K27211 SNORD66; small nucleolar RNA SNORD66
D 112476736 small nucleolar RNA SNORD67 K27212 SNORD67; small nucleolar RNA SNORD67
D 112474670 small nucleolar RNA MBII-202 K27213 SNORD68; small nucleolar RNA SNORD68
D 112484495 small nucleolar RNA SNORD69 K27214 SNORD69; small nucleolar RNA SNORD69
D 112470442 small nucleolar RNA SNORD70 K27215 SNORD70; small nucleolar RNA SNORD70
D 112470441 small nucleolar RNA SNORD70 K27215 SNORD70; small nucleolar RNA SNORD70
D 112478266 small nucleolar RNA SNORD71 K27216 SNORD71; small nucleolar RNA SNORD71
D 112486103 small nucleolar RNA SNORD72 K27181 SNORD72; small nucleolar RNA SNORD72
D 112475173 small nucleolar RNA SNORD73 K27208 SNORD73; small nucleolar RNA SNORD73
D 112475174 small nucleolar RNA SNORD73 K27208 SNORD73; small nucleolar RNA SNORD73
D 112476537 small nucleolar RNA SNORD74 K14890 SNORD74; small nucleolar RNA SNORD74
D 112476544 small nucleolar RNA SNORD75 K26312 SNORD75; small nucleolar RNA SNORD75
D 112476542 small nucleolar RNA SNORD77 K14886 SNORD77_80; small nucleolar RNA SNORD77/80
D 112476539 small nucleolar RNA snR60/Z15/Z230/Z193/J17 K14886 SNORD77_80; small nucleolar RNA SNORD77/80
D 112476543 small nucleolar RNA SNORD78 K26313 SNORD78; small nucleolar RNA SNORD78
D 112476535 small nucleolar RNA SNORD79 K26314 SNORD79; small nucleolar RNA SNORD79
D 112476534 small nucleolar RNA SNORD81 K26315 SNORD81; small nucleolar RNA SNORD81
D 112475455 small nucleolar RNA SNORD82 K27133 SNORD82; small nucleolar RNA SNORD82
D 112484251 small nucleolar RNA U83B K27134 SNORD83; small nucleolar RNA SNORD83
D 112471374 small nucleolar RNA SNORD86 K27176 SNORD86; small nucleolar RNA SNORD86
D 112472730 small nucleolar RNA SNORD87 K27177 SNORD87 U87; small nucleolar RNA SNORD87
D 112470111 small nucleolar RNA SNORD89 K27178 SNORD89; small nucleolar RNA SNORD89
D 112484849 small nucleolar RNA SNORD90 K26474 SNORD90; small nucleolar RNA SNORD90
D 112473456 small nucleolar RNA SNORD91 family K27113 SNORD91; small nucleolar RNA SNORD91
D 112473455 small nucleolar RNA SNORD91 family K27113 SNORD91; small nucleolar RNA SNORD91
D 112479973 small nucleolar RNA SNORD93 K27114 SNORD93; small nucleolar RNA SNORD93
D 112484569 small nucleolar RNA SNORD94 K27115 SNORD94; small nucleolar RNA SNORD94
D 112472072 small nucleolar RNA SNORD95 K27116 SNORD95; small nucleolar RNA SNORD95
D 112472066 small nucleolar RNA SNORD96 family K27117 SNORD96; small nucleolar RNA SNORD96
D 112469564 small nucleolar RNA SNORD97 K27118 SNORD97; small nucleolar RNA SNORD97
D 112482804 small nucleolar RNA SNORD98 K27119 SNORD98; small nucleolar RNA SNORD98
D 112473073 small nucleolar RNA SNORD99 K27120 SNORD99; small nucleolar RNA SNORD99
D 112482615 small nucleolar RNA SNORD100 K27121 SNORD100; small nucleolar RNA SNORD100
D 112482612 small nucleolar RNA SNORD101 K27122 SNORD101; small nucleolar RNA SNORD101
D 112480030 small nucleolar RNA SNORD102 K27123 SNORD102; small nucleolar RNA SNORD102
D 112473061 small nucleolar RNA SNORD103/SNORD85 K27124 SNORD103; small nucleolar RNA SNORD103
D 112473063 small nucleolar RNA SNORD103/SNORD85 K27124 SNORD103; small nucleolar RNA SNORD103
D 112471689 small nucleolar RNA SNORD105 K27125 SNORD105; small nucleolar RNA SNORD105
D 112471692 small nucleolar RNA U105B K27125 SNORD105; small nucleolar RNA SNORD105
D 112473504 small nucleolar RNA SNORD107 K27126 SNORD107; small nucleolar RNA SNORD107
D 112475811 small nucleolar RNA SNORD109A K27128 SNORD109; small nucleolar RNA SNORD109
D 112471375 small nucleolar RNA SNORD110 K27129 SNORD110; small nucleolar RNA SNORD110
D 112478267 small nucleolar RNA SNORD111 K27130 SNORD111; small nucleolar RNA SNORD111
D 112478268 small nucleolar RNA SNORD111 K27130 SNORD111; small nucleolar RNA SNORD111
D 112473917 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473915 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473923 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473927 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473941 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473921 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473926 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473956 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473932 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473914 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473937 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112479972 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473916 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473925 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473928 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473939 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473947 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112473930 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 112475809 small nucleolar RNA SNORD116 K27135 SNORD116; small nucleolar RNA SNORD116
D 112475807 small nucleolar RNA SNORD116 K27135 SNORD116; small nucleolar RNA SNORD116
D 112475804 small nucleolar RNA SNORD116 K27135 SNORD116; small nucleolar RNA SNORD116
D 112478992 small nucleolar RNA SNORD83 K27136 SNORD117; small nucleolar RNA SNORD117
D 112478995 small nucleolar RNA SNORD83 K27136 SNORD117; small nucleolar RNA SNORD117
D 112483139 small nucleolar RNA SNORD121A K27137 SNORD121; small nucleolar RNA SNORD121
D 112483138 small nucleolar RNA SNORD121A K27137 SNORD121; small nucleolar RNA SNORD121
D 112483021 small nucleolar RNA SNORD123 K27138 SNORD123; small nucleolar RNA SNORD123
D 112473457 small nucleolar RNA SNORD124 K27139 SNORD124; small nucleolar RNA SNORD124
D 112480910 small nucleolar RNA SNORD125 K27140 SNORD125; small nucleolar RNA SNORD125
D 112484982 small nucleolar RNA SNORD126 K27141 SNORD126; small nucleolar RNA SNORD126
D 112470119 small nucleolar RNA SNORD127 K27142 SNORD127; small nucleolar RNA SNORD127
D 112471720 small nucleolar RNA SNORD127 K27142 SNORD127; small nucleolar RNA SNORD127
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
D 112473058 small nucleolar RNA SNORA73 family K14908 SNORA73; small nucleolar RNA SNORA73
D 112473057 small nucleolar RNA SNORA73 family K14908 SNORA73; small nucleolar RNA SNORA73
D 112479436 small nucleolar RNA SNORA5 K14923 SNORA5; small nucleolar RNA SNORA5
D 112479437 small nucleolar RNA SNORA5 K14923 SNORA5; small nucleolar RNA SNORA5
D 112481337 small nucleolar RNA SNORA5 K14923 SNORA5; small nucleolar RNA SNORA5
D 112471376 small nucleolar RNA SNORA11 K14925 SNORA11; small nucleolar RNA SNORA11
D 112480667 small nucleolar RNA SNORA11 K14925 SNORA11; small nucleolar RNA SNORA11
D 112472237 small nucleolar RNA SNORA11 K14925 SNORA11; small nucleolar RNA SNORA11
D 112480402 small nucleolar RNA SNORA11 K14925 SNORA11; small nucleolar RNA SNORA11
D 112482616 small nucleolar RNA SNORA11 K14925 SNORA11; small nucleolar RNA SNORA11
D 112476973 small nucleolar RNA SNORA11 K14925 SNORA11; small nucleolar RNA SNORA11
D 112473064 small nucleolar RNA SNORA16B/SNORA16A family K14927 SNORA16; small nucleolar RNA SNORA16
D 112482941 small nucleolar RNA SNORA16B/SNORA16A family K14927 SNORA16; small nucleolar RNA SNORA16
D 112480150 small nucleolar RNA SNORA76 K14928 SNORA50_76; small nucleolar RNA SNORA50/76
D 112478264 small nucleolar RNA SNORA50 K14928 SNORA50_76; small nucleolar RNA SNORA50/76
D 112481970 small nucleolar RNA SNORA76 K14928 SNORA50_76; small nucleolar RNA SNORA50/76
D 112481967 small nucleolar RNA SNORA53 K14929 SNORA53; small nucleolar RNA SNORA53
D 112478265 small nucleolar RNA SNORA54 K14931 SNORA54; small nucleolar RNA SNORA54
D 112482303 small nucleolar RNA SNORA54 K14931 SNORA54; small nucleolar RNA SNORA54
D 112479289 small nucleolar RNA SNORA54 K14931 SNORA54; small nucleolar RNA SNORA54
D 112472067 small nucleolar RNA SNORA74 K14932 SNORA74; small nucleolar RNA SNORA74
D 112483923 small nucleolar RNA SNORA74 K14932 SNORA74; small nucleolar RNA SNORA74
D 112482510 small nucleolar RNA SNORA77 K14935 SNORA77; small nucleolar RNA SNORA77
D 112478845 small nucleolar RNA SNORA77 K14935 SNORA77; small nucleolar RNA SNORA77
D 112481658 small nucleolar RNA ACA64 K14936 SNORA78; small nucleolar RNA SNORA78
D 112473959 small nucleolar RNA SNORA79 K26319 SNORA79; small nucleolar RNA SNORA79
D 112484981 small nucleolar RNA SNORA79 K26319 SNORA79; small nucleolar RNA SNORA79
D 112484496 small nucleolar RNA SNORA79 K26319 SNORA79; small nucleolar RNA SNORA79
D 112478647 small nucleolar RNA SNORA42/SNORA80 family K26320 SNORA80; small nucleolar RNA SNORA80
D 112469175 small nucleolar RNA SNORA42/SNORA80 family K26320 SNORA80; small nucleolar RNA SNORA80
D 112481965 small nucleolar RNA SNORA42/SNORA80 family K26320 SNORA80; small nucleolar RNA SNORA80
C SnoRNAs act as guides for pseudouridynation
D 112476255 small nucleolar RNA SNORA1 K14918 SNORA1; small nucleolar RNA SNORA1
D 112473066 small nucleolar RNA SNORA1 K14918 SNORA1; small nucleolar RNA SNORA1
D 112483858 small nucleolar RNA SNORA2/SNORA34 family K14922 SNORA2_34; small nucleolar RNA SNORA2/34
D 112483859 small nucleolar RNA SNORA2/SNORA34 family K14922 SNORA2_34; small nucleolar RNA SNORA2/34
D 112483860 small nucleolar RNA SNORA2/SNORA34 family K14922 SNORA2_34; small nucleolar RNA SNORA2/34
D 112469561 small nucleolar RNA SNORA3/SNORA45 family K14914 SNORA3; small nucleolar RNA SNORA3
D 112469562 small nucleolar RNA SNORA3/SNORA45 family K14914 SNORA3; small nucleolar RNA SNORA3
D 112474247 small nucleolar RNA SNORA4 K26321 SNORA4; small nucleolar RNA SNORA4
D 112482072 small nucleolar RNA SNORA62/SNORA6 family K14910 SNORA6_62; small nucleolar RNA SNORA6/62
D 112482070 small nucleolar RNA SNORA62/SNORA6 family K14910 SNORA6_62; small nucleolar RNA SNORA6/62
D 112478928 small nucleolar RNA SNORA62/SNORA6 family K14910 SNORA6_62; small nucleolar RNA SNORA6/62
D 112484492 small nucleolar RNA SNORA7 K26322 SNORA7; small nucleolar RNA SNORA7
D 112476253 small nucleolar RNA SNORA8 K26323 SNORA8; small nucleolar RNA SNORA8
D 112479438 small nucleolar RNA SNORA9 K26324 SNORA9; small nucleolar RNA SNORA9
D 112480665 small nucleolar RNA SNORA13 K14930 SNORA13; small nucleolar RNA SNORA13
D 112470039 small nucleolar RNA SNORA14 K14916 SNORA14; small nucleolar RNA SNORA14
D 112485297 small nucleolar RNA SNORA15 K26325 SNORA15; small nucleolar RNA SNORA15
D 112476043 small nucleolar RNA SNORA15 K26325 SNORA15; small nucleolar RNA SNORA15
D 112484848 small nucleolar RNA SNORA17 K26326 SNORA17_43; small nucleolar RNA SNORA17/43
D 112481119 small nucleolar RNA SNORA43 K26326 SNORA17_43; small nucleolar RNA SNORA17/43
D 112484846 small nucleolar RNA SNORA43 K26326 SNORA17_43; small nucleolar RNA SNORA17/43
D 112476257 small nucleolar RNA SNORA18 K26327 SNORA18; small nucleolar RNA SNORA18
D 112481966 small nucleolar RNA SNORA18 K26327 SNORA18; small nucleolar RNA SNORA18
D 112470191 small nucleolar RNA SNORA19 K26328 SNORA19; small nucleolar RNA SNORA19
D 112470190 small nucleolar RNA SNORA19 K26328 SNORA19; small nucleolar RNA SNORA19
D 112482364 small nucleolar RNA SNORA20 K14933 SNORA20; small nucleolar RNA SNORA20
D 112473452 small nucleolar RNA SNORA21 K14909 SNORA21; small nucleolar RNA SNORA21
D 112485298 small nucleolar RNA SNORA22 K26329 SNORA22; small nucleolar RNA SNORA22
D 112469560 small nucleolar RNA SNORA23 K26330 SNORA23; small nucleolar RNA SNORA23
D 112469946 small nucleolar RNA SNORA23 K26330 SNORA23; small nucleolar RNA SNORA23
D 112484649 small nucleolar RNA SNORA24 K26331 SNORA24; small nucleolar RNA SNORA24
D 112476254 small nucleolar RNA SNORA25 K26332 SNORA25; small nucleolar RNA SNORA25
D 112474419 small nucleolar RNA SNORA25 K26332 SNORA25; small nucleolar RNA SNORA25
D 112479557 small nucleolar RNA SNORA27 K26333 SNORA27; small nucleolar RNA SNORA27
D 112480031 small nucleolar RNA SNORA27 K26333 SNORA27; small nucleolar RNA SNORA27
D 112473958 small nucleolar RNA SNORA28 K26334 SNORA28; small nucleolar RNA SNORA28
D 112474672 small nucleolar RNA SNORA30/SNORA37 family K26335 SNORA30_37; small nucleolar RNA SNORA30/37
D 112472826 small nucleolar RNA SNORA30/SNORA37 family K26335 SNORA30_37; small nucleolar RNA SNORA30/37
D 112486194 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31
D 112479412 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31
D 112482255 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31
D 112483961 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31
D 112485167 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31
D 112484491 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31
D 112476256 small nucleolar RNA SNORA32 K26337 SNORA32; small nucleolar RNA SNORA32
D 112483271 small nucleolar RNA SNORA36 family K26338 SNORA36; small nucleolar RNA SNORA36
D 112476261 small nucleolar RNA SNORA40 K14926 SNORA40; small nucleolar RNA SNORA40
D 112470439 small nucleolar RNA SNORA41 K26339 SNORA41; small nucleolar RNA SNORA41
D 112473065 small nucleolar RNA SNORA44 K26340 SNORA44; small nucleolar RNA SNORA44
D 112478263 small nucleolar RNA SNORA46 K26341 SNORA46; small nucleolar RNA SNORA46
D 112480672 small nucleolar RNA SNORA47 K27149 SNORA47; small nucleolar RNA SNORA47
D 112471445 small nucleolar RNA SNORA48 K26342 SNORA48; small nucleolar RNA SNORA48
D 112482445 small nucleolar RNA SNORA48 K26342 SNORA48; small nucleolar RNA SNORA48
D 112471843 small nucleolar RNA SNORA48 K26342 SNORA48; small nucleolar RNA SNORA48
D 112471446 small nucleolar RNA SNORA48 K26342 SNORA48; small nucleolar RNA SNORA48
D 112476734 small nucleolar RNA SNORA52 K14911 SNORA52; small nucleolar RNA SNORA52
D 112483479 small nucleolar RNA SNORA52 K14911 SNORA52; small nucleolar RNA SNORA52
D 112470088 small nucleolar RNA SNORA55 K27150 SNORA55; small nucleolar RNA SNORA55
D 112485429 small nucleolar RNA SNORA56 K14912 SNORA56; small nucleolar RNA SNORA56
D 112472187 small nucleolar RNA SNORA58 K26343 SNORA58; small nucleolar RNA SNORA58
D 112471359 small nucleolar RNA SNORA71 K26344 SNORA60_71; small nucleolar RNA SNORA60/71
D 112471360 small nucleolar RNA SNORA71 K26344 SNORA60_71; small nucleolar RNA SNORA60/71
D 112471358 small nucleolar RNA SNORA71 K26344 SNORA60_71; small nucleolar RNA SNORA60/71
D 112471357 small nucleolar RNA SNORA71 K26344 SNORA60_71; small nucleolar RNA SNORA60/71
D 112473067 small nucleolar RNA SNORA61 K26345 SNORA61; small nucleolar RNA SNORA61
D 112481653 small nucleolar RNA SNORA64/SNORA10 family K14924 SNORA10_64; small nucleolar RNA SNORA10/64
D 112486075 small nucleolar RNA SNORA66 K26358 SNORA66; small nucleolar RNA SNORA66
D 112471444 small nucleolar RNA SNORA67 K26359 SNORA67; small nucleolar RNA SNORA67
D 112477218 small nucleolar RNA SNORA68 K26360 SNORA68; small nucleolar RNA SNORA68
D 112479213 small nucleolar RNA SNORA69 K26361 SNORA69; small nucleolar RNA SNORA69
D 112472545 small nucleolar RNA SNORA70 K14879 SNORA70; small nucleolar RNA SNORA70
D 112482555 small nucleolar RNA SNORA70 K14879 SNORA70; small nucleolar RNA SNORA70
D 112473442 small nucleolar RNA SNORA70 K14879 SNORA70; small nucleolar RNA SNORA70
D 112479969 small nucleolar RNA SNORA70 K14879 SNORA70; small nucleolar RNA SNORA70
D 112483740 small nucleolar RNA SNORA72 K26362 SNORA72; small nucleolar RNA SNORA72
D 112471686 small nucleolar RNA SNORA72 K26362 SNORA72; small nucleolar RNA SNORA72
D 112473060 small nucleolar RNA SNORA72 K26362 SNORA72; small nucleolar RNA SNORA72
D 112472068 small nucleolar RNA SNORA72 K26362 SNORA72; small nucleolar RNA SNORA72
D 112475454 small nucleolar RNA SNORA75 K26363 SNORA75; small nucleolar RNA SNORA75
D 112471815 small nucleolar RNA SNORA84 K27151 SNORA84; small nucleolar RNA SNORA84
B Other snoRNA
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2024