+D GENES KO
#
KEGG Orthology (KO) - Paludicola sp. MB14-C6
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:palm00010]
D RBG61_08670 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RBG61_03565 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBG61_01310 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBG61_06825 diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RBG61_13835 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBG61_02570 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RBG61_11140 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBG61_02575 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RBG61_02565 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBG61_08565 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBG61_06280 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RBG61_08710 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RBG61_12100 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBG61_08265 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RBG61_12400 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBG61_12395 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBG61_01355 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RBG61_00080 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_01260 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_08970 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RBG61_03805 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBG61_10270 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RBG61_04775 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:palm00020]
D RBG61_10665 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RBG61_06315 2-isopropylmalate synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D RBG61_03010 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RBG61_03015 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RBG61_12100 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBG61_12400 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBG61_12395 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBG61_12390 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RBG61_12405 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RBG61_13330 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RBG61_02340 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RBG61_10270 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RBG61_08265 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:palm00030]
D RBG61_03565 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBG61_03835 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RBG61_00205 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBG61_00210 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBG61_02800 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RBG61_04405 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RBG61_10090 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RBG61_05465 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RBG61_04395 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RBG61_03805 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBG61_07500 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RBG61_08700 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RBG61_00960 bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RBG61_00965 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RBG61_13835 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBG61_01310 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBG61_06825 diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:palm00040]
D RBG61_00945 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D RBG61_00950 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D RBG61_00265 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBG61_03835 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RBG61_04495 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RBG61_10085 FGGY family carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RBG61_04500 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RBG61_11655 rhamnulokinase family protein K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RBG61_00520 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RBG61_00530 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D RBG61_11660 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D RBG61_11650 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:palm00051]
D RBG61_08660 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RBG61_05570 sugar phosphate nucleotidyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D RBG61_11660 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D RBG61_11650 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RBG61_00525 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D RBG61_11655 rhamnulokinase family protein K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RBG61_00520 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RBG61_00530 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D RBG61_01310 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBG61_06825 diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RBG61_10730 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RBG61_04500 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RBG61_13835 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBG61_02570 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RBG61_02800 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:palm00052]
D RBG61_08970 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RBG61_11485 galactokinase family protein K00849 galK; galactokinase [EC:2.7.1.6]
D RBG61_13285 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RBG61_04415 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RBG61_00265 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBG61_03805 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBG61_08670 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RBG61_00295 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RBG61_10525 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RBG61_09190 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D RBG61_05025 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RBG61_01310 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBG61_06825 diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RBG61_05015 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:palm00500]
D RBG61_00265 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBG61_02260 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_07900 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_13780 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_05030 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RBG61_00805 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RBG61_00785 alpha-amylase family glycosyl hydrolase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D RBG61_05015 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D RBG61_10975 glycoside hydrolase family 66 protein K05988 dexA; dextranase [EC:3.2.1.11]
D RBG61_00810 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RBG61_04775 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RBG61_03805 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBG61_08670 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RBG61_03565 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:palm00520]
D RBG61_11490 glycoside hydrolase family 18 protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RBG61_12115 glycosyl hydrolase family 18 protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RBG61_05205 glycoside hydrolase family 18 protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RBG61_08895 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RBG61_02270 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RBG61_07905 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RBG61_10785 N,N'-diacetylchitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D RBG61_04775 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RBG61_12830 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RBG61_00985 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RBG61_05605 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RBG61_08385 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D RBG61_00990 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D RBG61_06005 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RBG61_01135 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RBG61_08705 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RBG61_06895 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D RBG61_08905 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D RBG61_08900 anmK; anhydro-N-acetylmuramic acid kinase AnmK K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RBG61_03595 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBG61_04925 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBG61_01290 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RBG61_10895 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D RBG61_08055 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RBG61_06295 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D RBG61_13220 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D RBG61_05070 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D RBG61_08670 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RBG61_03805 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBG61_00265 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBG61_11485 galactokinase family protein K00849 galK; galactokinase [EC:2.7.1.6]
D RBG61_13285 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RBG61_04415 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RBG61_03565 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBG61_08660 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RBG61_05570 sugar phosphate nucleotidyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
C 00620 Pyruvate metabolism [PATH:palm00620]
D RBG61_00080 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_01260 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_08265 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RBG61_12400 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBG61_12395 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBG61_12100 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBG61_08415 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RBG61_01355 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RBG61_10815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RBG61_08360 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RBG61_06280 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RBG61_07640 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RBG61_07620 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RBG61_07630 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RBG61_07635 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RBG61_10370 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RBG61_01250 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RBG61_09610 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D RBG61_08025 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_04645 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_09675 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_13330 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RBG61_02340 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RBG61_10270 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RBG61_08710 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RBG61_03530 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RBG61_08865 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:palm00630]
D RBG61_00080 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_01260 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_10665 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RBG61_03010 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RBG61_06320 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D RBG61_02350 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RBG61_07000 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RBG61_08605 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RBG61_04230 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00720 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_08675 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBG61_12100 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBG61_12615 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RBG61_00960 bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:palm00640]
D RBG61_00080 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_01260 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_10815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RBG61_08360 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RBG61_12100 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBG61_08415 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RBG61_07640 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RBG61_07620 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RBG61_07630 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RBG61_07635 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RBG61_07560 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D RBG61_11015 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D RBG61_13790 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:palm00650]
D RBG61_10445 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D RBG61_01355 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RBG61_10075 iron-containing alcohol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D RBG61_08025 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_04645 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_09675 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_09605 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RBG61_08415 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D RBG61_08265 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RBG61_12400 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBG61_12395 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBG61_08855 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RBG61_08850 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism
D RBG61_08855 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RBG61_08850 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00562 Inositol phosphate metabolism
D RBG61_02570 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:palm00190]
D RBG61_01755 NADH-dependent [FeFe] hydrogenase, group A6 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RBG61_07370 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RBG61_07360 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RBG61_07365 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RBG61_07375 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RBG61_07355 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RBG61_07390 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RBG61_07380 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RBG61_07385 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RBG61_11510 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RBG61_11505 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RBG61_11535 V-type ATPase subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D RBG61_11500 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RBG61_11520 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D RBG61_11530 V-type ATPase 116kDa subunit family protein K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RBG61_11525 ATP synthase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D RBG61_03250 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:palm00710]
D RBG61_02575 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RBG61_11140 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBG61_13835 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBG61_00205 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBG61_00210 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBG61_02800 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RBG61_02570 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RBG61_03835 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RBG61_08710 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:palm00720]
D RBG61_08265 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D RBG61_08710 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RBG61_13330 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RBG61_02340 FumA C-terminus/TtdB family hydratase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RBG61_12400 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RBG61_12395 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RBG61_12390 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RBG61_12405 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D RBG61_03015 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RBG61_03010 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RBG61_07640 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RBG61_07620 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RBG61_07630 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RBG61_07635 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RBG61_02785 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RBG61_01330 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RBG61_00740 4Fe-4S dicluster domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D RBG61_08360 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RBG61_10815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RBG61_00080 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_01260 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:palm00680]
D RBG61_00740 4Fe-4S dicluster domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D RBG61_08675 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBG61_06320 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D RBG61_13835 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RBG61_01310 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBG61_06825 diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RBG61_02415 mch; methenyltetrahydromethanopterin cyclohydrolase K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27]
D RBG61_10815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RBG61_00080 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_01260 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_02565 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBG61_08565 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBG61_07270 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBG61_07275 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RBG61_11480 uroporphyrinogen decarboxylase family protein K14080 mtaA; [methyl-Co(III) methanol/glycine betaine-specific corrinoid protein]:coenzyme M methyltransferase [EC:2.1.1.246 2.1.1.377]
D RBG61_09535 uroporphyrinogen decarboxylase family protein K14082 mtbA; [methyl-Co(III) methylamine-specific corrinoid protein]:coenzyme M methyltransferase [EC:2.1.1.247]
C 00910 Nitrogen metabolism [PATH:palm00910]
D RBG61_05450 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D RBG61_06760 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RBG61_04230 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00720 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00220 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RBG61_06335 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RBG61_05495 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:palm00920]
D RBG61_13640 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D RBG61_13090 phosphoadenosine phosphosulfate reductase family protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RBG61_10720 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RBG61_04280 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RBG61_04790 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:palm00061]
D RBG61_07640 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RBG61_07620 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RBG61_07630 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RBG61_07635 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RBG61_07645 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RBG61_07600 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RBG61_07605 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RBG61_07615 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RBG61_06910 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBG61_07610 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBG61_07625 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RBG61_10445 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:palm00071]
D RBG61_01355 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:palm00561]
D RBG61_12615 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RBG61_13790 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D RBG61_03690 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RBG61_03185 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RBG61_12485 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RBG61_02315 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RBG61_01715 diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RBG61_12340 lipase family protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D RBG61_02725 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D RBG61_09190 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D RBG61_05025 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:palm00564]
D RBG61_12480 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RBG61_03685 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RBG61_12805 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RBG61_12485 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RBG61_02315 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RBG61_01715 diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RBG61_02950 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RBG61_10715 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RBG61_11375 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RBG61_07050 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D RBG61_12825 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
C 00600 Sphingolipid metabolism [PATH:palm00600]
D RBG61_00295 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RBG61_10525 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RBG61_09520 arylsulfatase K01130 E3.1.6.1; arylsulfatase [EC:3.1.6.1]
D RBG61_09190 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D RBG61_05025 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RBG61_02270 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RBG61_07905 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:palm00230]
D RBG61_05905 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RBG61_04395 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RBG61_03805 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RBG61_07500 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RBG61_08700 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RBG61_07505 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RBG61_00765 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RBG61_07475 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RBG61_07490 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RBG61_05090 formyltransferase family protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RBG61_09855 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D RBG61_07495 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RBG61_07515 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RBG61_07510 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RBG61_01040 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RBG61_07480 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RBG61_00895 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RBG61_04400 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RBG61_05540 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RBG61_07120 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RBG61_03160 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RBG61_07425 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RBG61_10290 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RBG61_02305 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RBG61_00830 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RBG61_03790 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RBG61_10360 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RBG61_04030 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RBG61_11110 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D RBG61_08275 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RBG61_05725 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RBG61_03080 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
C 00240 Pyrimidine metabolism [PATH:palm00240]
D RBG61_10505 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RBG61_10500 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RBG61_01075 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RBG61_10490 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RBG61_11175 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D RBG61_11180 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D RBG61_01690 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RBG61_10495 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RBG61_02965 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RBG61_03080 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RBG61_07590 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RBG61_04035 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RBG61_02320 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RBG61_08165 AAA family ATPase K00876 udk; uridine kinase [EC:2.7.1.48]
D RBG61_02805 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RBG61_10485 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RBG61_08275 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RBG61_04365 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D RBG61_04390 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RBG61_00830 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D RBG61_02305 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RBG61_08410 deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RBG61_07320 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RBG61_12335 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RBG61_01875 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:palm00250]
D RBG61_05575 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RBG61_09495 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RBG61_04225 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D RBG61_00725 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D RBG61_06815 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RBG61_09230 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RBG61_09235 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RBG61_04030 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RBG61_01040 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RBG61_01075 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RBG61_00220 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RBG61_06335 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RBG61_06760 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RBG61_04230 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00720 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_10505 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RBG61_10500 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RBG61_06005 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RBG61_07505 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RBG61_00765 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:palm00260]
D RBG61_02830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBG61_13860 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBG61_02840 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBG61_02835 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RBG61_04535 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RBG61_04680 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RBG61_08675 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBG61_06320 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D RBG61_12615 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RBG61_02565 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBG61_08565 alkaline phosphatase family protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RBG61_07270 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBG61_07275 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RBG61_12100 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBG61_04270 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBG61_04275 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBG61_06810 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:palm00270]
D RBG61_10720 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RBG61_04280 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RBG61_08615 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RBG61_10390 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RBG61_06925 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RBG61_06935 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RBG61_11225 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RBG61_06010 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RBG61_01805 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RBG61_02830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBG61_13860 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBG61_02840 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBG61_04790 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D RBG61_09055 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RBG61_06805 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RBG61_04270 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBG61_04275 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RBG61_07270 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBG61_07275 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:palm00280]
D RBG61_06805 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RBG61_12100 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:palm00290]
D RBG61_08855 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RBG61_08850 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RBG61_06805 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RBG61_03530 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RBG61_08865 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:palm00300]
D RBG61_02840 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RBG61_02830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBG61_13860 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBG61_13865 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RBG61_13870 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RBG61_09255 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RBG61_00770 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RBG61_00780 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RBG61_05455 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RBG61_12545 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D RBG61_04860 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RBG61_03620 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RBG61_03615 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:palm00310]
D RBG61_12100 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:palm00220]
D RBG61_09260 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RBG61_09230 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RBG61_09235 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RBG61_09485 arginase K01476 rocF; arginase [EC:3.5.3.1]
D RBG61_04230 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00720 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_10505 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RBG61_10500 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RBG61_06760 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RBG61_09245 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RBG61_09250 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RBG61_09240 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RBG61_09255 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:palm00330]
D RBG61_02560 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RBG61_06930 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D RBG61_06940 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RBG61_06935 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RBG61_06925 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RBG61_00370 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RBG61_00440 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RBG61_09485 arginase K01476 rocF; arginase [EC:3.5.3.1]
D RBG61_00245 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RBG61_04455 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RBG61_04460 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RBG61_06950 nspC; carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
C 00340 Histidine metabolism [PATH:palm00340]
D RBG61_02920 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RBG61_02925 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RBG61_02855 hisE; phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RBG61_02860 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RBG61_02875 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RBG61_02885 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RBG61_02870 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RBG61_02895 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RBG61_02905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBG61_02915 PHP domain-containing protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D RBG61_11560 histidinol-phosphatase HisJ family protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D RBG61_02910 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:palm00350]
D RBG61_02905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBG61_01355 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:palm00360]
D RBG61_01735 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RBG61_01750 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RBG61_02905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBG61_00370 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RBG61_00440 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RBG61_13475 FAD-dependent oxidoreductase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
C 00380 Tryptophan metabolism [PATH:palm00380]
D RBG61_12100 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RBG61_00370 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RBG61_00440 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:palm00400]
D RBG61_11070 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RBG61_10220 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RBG61_11045 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RBG61_13675 iron-containing alcohol dehydrogenase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RBG61_03110 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RBG61_11065 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RBG61_07595 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RBG61_11075 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RBG61_11055 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RBG61_06810 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RBG61_11040 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RBG61_02845 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D RBG61_11080 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RBG61_02905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00430 Taurine and hypotaurine metabolism [PATH:palm00430]
D RBG61_08360 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RBG61_10815 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:palm00440]
D RBG61_10870 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
D RBG61_01655 PHP domain-containing protein K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57]
C 00450 Selenocompound metabolism [PATH:palm00450]
D RBG61_08615 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RBG61_04750 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RBG61_02210 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:palm00460]
D RBG61_02260 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_07900 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_13780 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_05030 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RBG61_04225 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D RBG61_00725 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D RBG61_08675 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:palm00470]
D RBG61_05160 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RBG61_08635 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBG61_08630 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RBG61_04220 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RBG61_09495 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RBG61_00770 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RBG61_05455 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:palm00480]
D RBG61_11020 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RBG61_03015 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RBG61_06935 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:palm00511]
D RBG61_00295 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RBG61_10525 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RBG61_02270 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RBG61_07905 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RBG61_05130 glycoside hydrolase family 38 C-terminal domain-containing protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RBG61_05180 glycoside hydrolase family 38 C-terminal domain-containing protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RBG61_05250 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RBG61_10200 glycoside hydrolase family 38 C-terminal domain-containing protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RBG61_03240 glycoside hydrolase family 2 TIM barrel-domain containing protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D RBG61_02440 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RBG61_12175 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RBG61_13605 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RBG61_10115 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:palm00541]
D RBG61_00265 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RBG61_13285 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RBG61_04415 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RBG61_08660 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RBG61_08705 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RBG61_08055 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RBG61_13220 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D RBG61_05070 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D RBG61_13225 NAD-dependent epimerase/dehydratase family protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D RBG61_13230 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D RBG61_06295 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C 00550 Peptidoglycan biosynthesis [PATH:palm00550]
D RBG61_03595 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBG61_04925 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBG61_01290 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RBG61_08390 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RBG61_04220 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RBG61_03620 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RBG61_08635 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBG61_03615 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RBG61_02955 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RBG61_04340 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RBG61_03610 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBG61_04740 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBG61_03600 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RBG61_11470 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RBG61_07420 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RBG61_07570 penicillin-binding transpeptidase domain-containing protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RBG61_03625 penicillin-binding transpeptidase domain-containing protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RBG61_03505 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RBG61_03560 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RBG61_09585 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RBG61_03985 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_07690 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_13495 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_09480 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
C 00552 Teichoic acid biosynthesis [PATH:palm00552]
D RBG61_04340 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RBG61_11640 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RBG61_03140 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RBG61_10820 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RBG61_12685 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D RBG61_02725 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D RBG61_13235 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D RBG61_13945 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:palm00543]
D RBG61_08225 MBOAT family O-acyltransferase K19294 algI; alginate O-acetyltransferase complex protein AlgI
D RBG61_10720 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:palm00730]
D RBG61_00935 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RBG61_07740 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBG61_08930 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBG61_08935 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D RBG61_02460 hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D RBG61_13755 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RBG61_00925 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RBG61_00930 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RBG61_10340 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RBG61_05725 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:palm00740]
D RBG61_13650 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RBG61_00925 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RBG61_05905 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:palm00750]
D RBG61_10465 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D RBG61_07275 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RBG61_04535 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:palm00760]
D RBG61_05575 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RBG61_04090 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RBG61_00850 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RBG61_05585 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RBG61_04260 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RBG61_04400 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RBG61_03150 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RBG61_03080 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RBG61_11030 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RBG61_00775 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RBG61_13765 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:palm00770]
D RBG61_08855 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RBG61_08850 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RBG61_08745 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RBG61_03080 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RBG61_02770 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RBG61_09740 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RBG61_09000 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RBG61_06805 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:palm00780]
D RBG61_07615 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RBG61_06910 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBG61_07610 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBG61_07625 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RBG61_04290 hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D RBG61_09540 radical SAM protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D RBG61_10645 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D RBG61_10635 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:palm00785]
D RBG61_12105 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RBG61_12100 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00790 Folate biosynthesis [PATH:palm00790]
D RBG61_04815 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:palm00670]
D RBG61_02785 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RBG61_01330 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RBG61_08675 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RBG61_07490 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RBG61_05090 formyltransferase family protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RBG61_07480 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RBG61_10310 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RBG61_08615 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RBG61_01875 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RBG61_01855 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:palm00860]
D RBG61_00910 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBG61_08480 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RBG61_08510 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RBG61_08505 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RBG61_08495 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RBG61_02370 uroporphyrinogen decarboxylase family protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RBG61_02665 uroporphyrinogen decarboxylase family protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RBG61_12565 uroporphyrinogen decarboxylase family protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RBG61_08695 flavodoxin domain-containing protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D RBG61_08500 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D RBG61_08465 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RBG61_08485 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D RBG61_08470 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RBG61_08475 cobalt-precorrin 5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RBG61_08490 cobK; precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D RBG61_08460 cbiD; cobalt-precorrin-5B (C(1))-methyltransferase CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D RBG61_08520 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RBG61_08580 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RBG61_08525 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RBG61_08575 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RBG61_08570 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RBG61_08555 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RBG61_08535 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RBG61_08540 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RBG61_08530 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RBG61_00330 bchH; magnesium chelatase subunit H K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D RBG61_00340 AAA family ATPase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D RBG61_00335 AAA family ATPase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:palm00900]
D RBG61_13755 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RBG61_02945 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RBG61_04235 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RBG61_11585 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RBG61_01550 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RBG61_02935 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RBG61_13745 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RBG61_02955 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RBG61_00205 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RBG61_00210 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures [PATH:palm01054]
D RBG61_09495 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:palm00946]
D RBG61_02260 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_07900 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_13780 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_05030 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RBG61_00535 family 78 glycoside hydrolase catalytic domain K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D RBG61_00555 family 78 glycoside hydrolase catalytic domain K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:palm00332]
D RBG61_04455 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RBG61_04460 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:palm00261]
D RBG61_02830 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RBG61_13860 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RBG61_13865 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RBG61_13870 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:palm00521]
D RBG61_08670 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D RBG61_03805 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RBG61_08670 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:palm00401]
D RBG61_11080 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RBG61_02905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D RBG61_07600 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RBG61_06910 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBG61_07610 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RBG61_07645 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:palm00999]
D RBG61_10390 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RBG61_02260 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_07900 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_13780 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RBG61_05030 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:palm00362]
D RBG61_06880 PIG-L family deacetylase K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83]
D RBG61_08025 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_04645 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_09675 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_09605 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
C 00627 Aminobenzoate degradation
D RBG61_00370 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RBG61_00440 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:palm00625]
D RBG61_01355 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D RBG61_09075 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RBG61_08090 YjjG family noncanonical pyrimidine nucleotidase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D RBG61_08090 YjjG family noncanonical pyrimidine nucleotidase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D RBG61_00740 4Fe-4S dicluster domain-containing protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:palm00643]
D RBG61_00370 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RBG61_00440 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:palm00626]
D RBG61_01355 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:palm03020]
D RBG61_09925 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RBG61_09930 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RBG61_05685 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RBG61_10295 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RBG61_10165 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:palm03010]
D RBG61_09765 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D RBG61_01335 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RBG61_05800 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RBG61_05690 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RBG61_05745 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RBG61_12460 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RBG61_09940 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RBG61_05760 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RBG61_06735 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RBG61_05835 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RBG61_05695 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RBG61_09935 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RBG61_05700 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RBG61_05765 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RBG61_02970 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RBG61_09820 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RBG61_05785 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RBG61_12470 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RBG61_05810 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RBG61_04605 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RBG61_03125 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RBG61_05435 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RBG61_05815 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RBG61_05830 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RBG61_05825 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RBG61_05770 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RBG61_05755 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RBG61_05445 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RBG61_05555 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RBG61_05440 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RBG61_05430 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RBG61_06730 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RBG61_05780 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RBG61_05735 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RBG61_05795 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RBG61_05680 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RBG61_05750 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RBG61_04560 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RBG61_03210 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RBG61_13890 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RBG61_05805 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RBG61_05820 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RBG61_05775 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RBG61_13900 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RBG61_09555 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RBG61_05790 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RBG61_05740 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RBG61_03800 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RBG61_12500 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RBG61_05415 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RBG61_07185 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RBG61_03215 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RBG61_05705 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RBG61_03385 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:palm00970]
D RBG61_00910 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBG61_01510 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RBG61_01505 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RBG61_01515 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RBG61_08190 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBG61_07550 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBG61_10890 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RBG61_09025 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RBG61_05985 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RBG61_07130 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RBG61_10725 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RBG61_02210 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RBG61_10310 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RBG61_03725 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RBG61_03130 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBG61_00185 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RBG61_02500 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RBG61_08620 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBG61_08340 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBG61_07555 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBG61_05220 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RBG61_05225 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RBG61_11445 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBG61_04865 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:palm03060]
D RBG61_05730 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBG61_05420 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBG61_04565 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBG61_01045 SecD/SecF family protein translocase subunit K03072 secD; preprotein translocase subunit SecD
D RBG61_01050 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RBG61_00225 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RBG61_07170 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RBG61_01025 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBG61_09815 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RBG61_03165 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RBG61_02890 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RBG61_04555 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RBG61_04015 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RBG61_00190 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RBG61_08015 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D RBG61_03495 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:palm04122]
D RBG61_07740 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBG61_08930 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBG61_04085 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RBG61_07750 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RBG61_08935 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:palm03018]
D RBG61_02975 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RBG61_04570 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RBG61_04620 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RBG61_05405 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RBG61_05565 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RBG61_01310 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBG61_10850 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBG61_08110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBG61_00155 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:palm03030]
D RBG61_01305 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBG61_02930 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RBG61_07945 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RBG61_11200 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RBG61_08215 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RBG61_07195 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBG61_05550 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RBG61_03785 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RBG61_12465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBG61_07735 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RBG61_04545 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RBG61_10235 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBG61_01520 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:palm03410]
D RBG61_13825 DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D RBG61_12450 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RBG61_11230 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RBG61_01245 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RBG61_09395 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RBG61_02540 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RBG61_03115 TIM barrel protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RBG61_10235 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBG61_10355 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RBG61_01520 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:palm03420]
D RBG61_08645 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RBG61_01670 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RBG61_01680 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RBG61_12305 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RBG61_01840 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBG61_02130 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBG61_10235 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBG61_01520 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:palm03430]
D RBG61_00140 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RBG61_01700 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D RBG61_00145 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RBG61_01840 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBG61_02130 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBG61_13735 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RBG61_13740 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RBG61_10355 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RBG61_12465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBG61_01305 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBG61_02930 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RBG61_07195 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBG61_07945 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RBG61_08215 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RBG61_11200 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RBG61_01520 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:palm03440]
D RBG61_10355 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RBG61_12465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBG61_07205 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RBG61_01705 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RBG61_07960 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D RBG61_10700 recA; recombinase RecA K03553 recA; recombination protein RecA
D RBG61_10235 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBG61_01125 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RBG61_01130 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RBG61_01120 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RBG61_08295 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RBG61_00865 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RBG61_01305 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBG61_02930 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RBG61_07195 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBG61_07945 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RBG61_08215 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RBG61_11200 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RBG61_10300 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:palm03450]
D RBG61_06680 Ku protein K10979 ku; DNA end-binding protein Ku
D RBG61_11745 Ku protein K10979 ku; DNA end-binding protein Ku
D RBG61_06675 RNA ligase family protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RBG61_11750 RNA ligase family protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:palm02010]
D RBG61_11630 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RBG61_11620 ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D RBG61_11625 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RBG61_03040 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RBG61_03035 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D RBG61_03030 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D RBG61_02810 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RBG61_00800 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RBG61_00795 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RBG61_00790 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RBG61_12150 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_12240 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_12245 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_12250 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_05165 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_08875 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_05175 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D RBG61_08880 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D RBG61_05170 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D RBG61_08885 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D RBG61_04385 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RBG61_04375 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RBG61_04370 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RBG61_04380 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RBG61_02385 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RBG61_02380 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RBG61_07435 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RBG61_07470 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RBG61_07445 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein
D RBG61_07440 mglA; galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D RBG61_07085 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D RBG61_07080 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RBG61_07075 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RBG61_07070 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RBG61_08310 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RBG61_08315 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RBG61_00840 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBG61_09955 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBG61_09965 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RBG61_09970 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RBG61_09975 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RBG61_09960 ABC transporter permease K16200 dppB1; dipeptide transport system permease protein
D RBG61_08445 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D RBG61_08440 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D RBG61_08450 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RBG61_08455 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RBG61_10640 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RBG61_01155 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D RBG61_01145 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RBG61_01150 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RBG61_02525 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RBG61_02530 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RBG61_07300 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_07305 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_04335 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_08330 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_04330 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_08325 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_04685 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:palm02060]
D RBG61_12840 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RBG61_04765 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RBG61_12835 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBG61_04760 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBG61_09840 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBG61_09845 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBG61_04775 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RBG61_12830 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RBG61_10730 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:palm03070]
D RBG61_01045 SecD/SecF family protein translocase subunit K03072 secD; preprotein translocase subunit SecD
D RBG61_01050 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RBG61_05420 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBG61_04565 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBG61_05730 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBG61_00225 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RBG61_07170 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RBG61_01025 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBG61_03165 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RBG61_09815 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RBG61_11885 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RBG61_13010 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:palm02020]
D RBG61_07055 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RBG61_07085 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D RBG61_03845 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RBG61_06235 flagellin K02406 fliC; flagellin
D RBG61_06075 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RBG61_04885 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D RBG61_06130 motility protein A K02556 motA; chemotaxis protein MotA
D RBG61_02680 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RBG61_13535 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RBG61_02675 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RBG61_13540 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RBG61_02685 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D RBG61_02690 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D RBG61_02695 K(+)-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D RBG61_07190 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RBG61_03975 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
D RBG61_03985 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_07690 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_13495 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_05595 VanW family protein K18346 vanW; vancomycin resistance protein VanW
D RBG61_12415 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RBG61_01250 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RBG61_10185 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D RBG61_06230 carbon storage regulator K03563 csrA; carbon storage regulator
D RBG61_06525 RcpC/CpaB family pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D RBG61_06535 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBG61_11960 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBG61_12890 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBG61_06555 hypothetical protein K12511 tadC; tight adherence protein C
D RBG61_04230 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00720 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_07775 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RBG61_07805 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_04490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_10225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_10650 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_10655 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_07795 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBG61_07800 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBG61_07780 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RBG61_04115 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBG61_06110 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBG61_07770 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RBG61_07460 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RBG61_02360 response regulator K07720 yesN; two-component system, response regulator YesN
D RBG61_07455 response regulator K07720 yesN; two-component system, response regulator YesN
D RBG61_12180 response regulator K07720 yesN; two-component system, response regulator YesN
D RBG61_12635 helix-turn-helix domain-containing protein K07720 yesN; two-component system, response regulator YesN
D RBG61_08055 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D RBG61_09485 arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:palm02024]
D RBG61_01805 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D RBG61_00155 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RBG61_02675 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RBG61_13540 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RBG61_10185 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D RBG61_00840 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBG61_09955 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBG61_09965 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RBG61_09970 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RBG61_09975 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RBG61_07170 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RBG61_05420 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBG61_04565 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBG61_05730 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBG61_00225 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RBG61_01025 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBG61_03165 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RBG61_09815 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RBG61_12415 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:palm02030]
D RBG61_07805 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_04490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_10225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_10650 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_10655 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_07435 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RBG61_07470 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RBG61_07780 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RBG61_07795 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBG61_07800 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBG61_04115 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBG61_06110 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBG61_06055 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D RBG61_07770 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RBG61_06050 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RBG61_07775 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RBG61_06175 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RBG61_06120 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RBG61_06115 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D RBG61_04885 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D RBG61_06130 motility protein A K02556 motA; chemotaxis protein MotA
D RBG61_04880 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RBG61_06125 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:palm02040]
D RBG61_06185 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RBG61_06180 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RBG61_06175 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RBG61_06170 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D RBG61_06165 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RBG61_06160 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ
D RBG61_06120 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RBG61_06115 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D RBG61_06105 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RBG61_06100 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RBG61_06095 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RBG61_06090 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RBG61_06080 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RBG61_06085 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RBG61_06195 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RBG61_06190 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RBG61_06150 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RBG61_06065 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D RBG61_06140 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D RBG61_06070 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D RBG61_06210 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RBG61_06215 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RBG61_06235 flagellin K02406 fliC; flagellin
D RBG61_06255 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D RBG61_06250 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D RBG61_04885 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D RBG61_06130 motility protein A K02556 motA; chemotaxis protein MotA
D RBG61_04880 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RBG61_06125 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RBG61_03780 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RBG61_06075 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D RBG61_08615 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:palm01501]
D RBG61_08895 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RBG61_00840 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBG61_09955 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBG61_09965 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RBG61_09970 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RBG61_09975 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RBG61_10125 extracellular solute-binding protein K02172 blaR1; bla regulator protein blaR1
D RBG61_00045 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D RBG61_10135 extracellular solute-binding protein K02172 blaR1; bla regulator protein blaR1
D RBG61_00050 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RBG61_10120 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RBG61_10130 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RBG61_11470 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RBG61_07420 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RBG61_07570 penicillin-binding transpeptidase domain-containing protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:palm01502]
D RBG61_03975 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
D RBG61_08635 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBG61_05160 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RBG61_03615 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RBG61_03610 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBG61_04740 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBG61_03600 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RBG61_03985 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_07690 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_13495 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_05595 VanW family protein K18346 vanW; vancomycin resistance protein VanW
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:palm01503]
D RBG61_06800 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBG61_11610 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBG61_13355 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBG61_06015 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBG61_03845 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:palm01000]
C 01001 Protein kinases [BR:palm01001]
D RBG61_10335 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RBG61_07055 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RBG61_02680 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RBG61_13535 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RBG61_07780 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RBG61_07460 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:palm01009]
D RBG61_01310 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBG61_12290 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RBG61_11495 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RBG61_12265 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RBG61_12275 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RBG61_10330 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:palm01002]
D RBG61_04015 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RBG61_00190 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RBG61_06520 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RBG61_08820 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RBG61_12875 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RBG61_04600 gpr; GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D RBG61_02735 sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D RBG61_07425 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RBG61_07505 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RBG61_00765 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RBG61_06005 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RBG61_06815 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RBG61_01860 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D RBG61_13490 class D sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RBG61_02230 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RBG61_08940 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RBG61_08950 srtB; class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RBG61_10185 accessory gene regulator B family protein K07813 agrB; accessory gene regulator B
D RBG61_01645 type II CAAX endopeptidase family protein K07052 K07052; CAAX protease family protein
D RBG61_10350 type II CAAX endopeptidase family protein K07052 K07052; CAAX protease family protein
D RBG61_05900 M14 family metallocarboxypeptidase K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D RBG61_03985 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_07690 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_13495 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_04540 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RBG61_11020 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RBG61_05720 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RBG61_05620 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D RBG61_05535 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RBG61_06470 M42 family metallopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D RBG61_02940 M50 family metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RBG61_10125 extracellular solute-binding protein K02172 blaR1; bla regulator protein blaR1
D RBG61_00045 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D RBG61_10135 extracellular solute-binding protein K02172 blaR1; bla regulator protein blaR1
D RBG61_03845 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RBG61_03505 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RBG61_03560 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RBG61_09585 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RBG61_04515 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RBG61_02655 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RBG61_02890 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RBG61_04555 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RBG61_08015 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D RBG61_03495 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D RBG61_02515 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RBG61_13460 Type 1 glutamine amidotransferase-like domain-containing protein K05995 pepE; dipeptidase E [EC:3.4.13.21]
D RBG61_12420 spoIVB; SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D RBG61_07315 DUF3656 domain-containing protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D RBG61_01845 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:palm01003]
D RBG61_02725 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D RBG61_11470 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RBG61_11640 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:palm01005]
D RBG61_05955 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:palm01011]
D RBG61_03595 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBG61_04925 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RBG61_01290 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RBG61_08390 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RBG61_04220 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RBG61_03620 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RBG61_09480 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D RBG61_08635 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RBG61_05160 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RBG61_08630 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RBG61_03610 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBG61_04740 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RBG61_03600 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RBG61_04340 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RBG61_11470 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RBG61_07420 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RBG61_07570 penicillin-binding transpeptidase domain-containing protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RBG61_03625 penicillin-binding transpeptidase domain-containing protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D RBG61_03505 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RBG61_03560 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RBG61_09585 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RBG61_03985 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_07690 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_13495 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_13490 class D sortase K07284 srtA; sortase A [EC:3.4.22.70]
D RBG61_02230 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RBG61_08940 class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RBG61_08950 srtB; class B sortase K08600 srtB; sortase B [EC:3.4.22.71]
D RBG61_09735 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RBG61_03485 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RBG61_01850 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RBG61_05385 sleB; spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RBG61_08960 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D RBG61_10660 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D RBG61_06800 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBG61_11610 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBG61_13355 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBG61_06015 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:palm01004]
D RBG61_07600 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RBG61_07605 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RBG61_07615 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RBG61_06910 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBG61_07610 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RBG61_07625 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RBG61_10445 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D RBG61_00080 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_01260 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RBG61_09900 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RBG61_03185 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RBG61_12485 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RBG61_02315 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:palm01008]
D RBG61_09495 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:palm01006]
D RBG61_13745 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RBG61_02955 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RBG61_00150 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:palm01007]
D RBG61_00910 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBG61_11445 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBG61_04865 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RBG61_10725 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RBG61_08620 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBG61_02210 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RBG61_00185 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RBG61_03725 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RBG61_03130 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBG61_02500 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RBG61_07550 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBG61_10890 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RBG61_07555 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBG61_09025 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RBG61_07130 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RBG61_08340 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBG61_05985 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RBG61_08190 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBG61_05220 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RBG61_05225 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RBG61_00780 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RBG61_11570 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10907 K10907; aminotransferase [EC:2.6.1.-]
D RBG61_02905 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RBG61_09255 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RBG61_08510 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RBG61_06805 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RBG61_07275 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:palm00194]
D RBG61_07355 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RBG61_07360 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RBG61_07365 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RBG61_07370 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RBG61_07375 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RBG61_07380 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RBG61_07385 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RBG61_07390 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:palm03000]
D RBG61_11325 AraC family transcriptional regulator K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D RBG61_08130 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D RBG61_08200 helix-turn-helix domain-containing protein K13653 K13653; AraC family transcriptional regulator
D RBG61_00610 helix-turn-helix domain-containing protein K13653 K13653; AraC family transcriptional regulator
D RBG61_04240 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D RBG61_00815 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RBG61_04505 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RBG61_10110 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RBG61_12110 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D RBG61_03480 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RBG61_04095 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D RBG61_13410 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RBG61_10630 metalloregulator ArsR/SmtB family transcription factor K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D RBG61_07340 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D RBG61_05945 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D RBG61_05865 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RBG61_08100 iron dependent repressor, metal binding and dimerization domain protein K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D RBG61_00050 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RBG61_10120 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RBG61_10130 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RBG61_10635 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RBG61_02535 helix-turn-helix domain-containing protein K02647 cdaR; carbohydrate diacid regulator
D RBG61_12625 sugar diacid recognition domain-containing protein K02647 cdaR; carbohydrate diacid regulator
D RBG61_03020 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D RBG61_05185 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D RBG61_10435 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D RBG61_12350 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D RBG61_12850 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D RBG61_04005 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RBG61_05510 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D RBG61_13370 stage V sporulation T C-terminal domain-containing protein K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D RBG61_07135 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_07145 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_12030 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_12865 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_06390 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_13770 hypothetical protein K03402 argR; transcriptional regulator of arginine metabolism
D RBG61_10840 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RBG61_00110 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D RBG61_10485 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RBG61_02175 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RBG61_03640 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:palm03021]
D RBG61_05685 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RBG61_09925 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RBG61_09930 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RBG61_10295 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RBG61_03780 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RBG61_03665 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RBG61_03860 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RBG61_03925 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RBG61_08080 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RBG61_12385 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RBG61_05480 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RBG61_09790 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RBG61_10455 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RBG61_02730 sigE; RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RBG61_07670 sigK; RNA polymerase sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RBG61_01060 sigG; RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RBG61_04800 sigma-70 family RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D RBG61_10475 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor
D RBG61_06075 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RBG61_13615 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RBG61_13725 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RBG61_05425 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RBG61_02505 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RBG61_10165 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03019 Messenger RNA biogenesis [BR:palm03019]
D RBG61_03180 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RBG61_05565 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RBG61_05405 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RBG61_04570 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RBG61_04620 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RBG61_02975 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RBG61_01310 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RBG61_10850 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBG61_08110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBG61_00155 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RBG61_06230 carbon storage regulator K03563 csrA; carbon storage regulator
D RBG61_01295 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:palm03011]
D RBG61_09765 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D RBG61_01335 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RBG61_05800 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RBG61_05690 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RBG61_05745 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RBG61_12460 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RBG61_09940 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RBG61_05760 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RBG61_06735 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RBG61_05835 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RBG61_05695 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RBG61_09935 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RBG61_05700 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RBG61_05765 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RBG61_02970 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RBG61_09820 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RBG61_05785 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RBG61_12470 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RBG61_05810 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RBG61_04605 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RBG61_03125 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RBG61_05435 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RBG61_05815 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RBG61_05830 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RBG61_05825 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RBG61_05770 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RBG61_05755 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RBG61_05555 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RBG61_05440 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RBG61_05430 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RBG61_05445 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RBG61_06730 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RBG61_05780 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RBG61_05735 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RBG61_05795 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RBG61_05680 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RBG61_05750 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RBG61_04560 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RBG61_03210 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RBG61_13890 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RBG61_05805 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RBG61_05820 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RBG61_05775 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RBG61_13900 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RBG61_09555 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RBG61_05790 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RBG61_05740 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RBG61_03800 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RBG61_12500 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RBG61_05415 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RBG61_07185 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RBG61_03215 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RBG61_05705 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RBG61_03385 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 03009 Ribosome biogenesis [BR:palm03009]
D RBG61_03180 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RBG61_01710 era; GTPase Era K03595 era; GTPase
D RBG61_13905 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D RBG61_13615 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RBG61_13725 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RBG61_05425 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RBG61_02815 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D RBG61_08405 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RBG61_10320 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RBG61_02775 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RBG61_09285 RsmE family RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RBG61_07150 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RBG61_03635 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RBG61_09875 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RBG61_13760 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RBG61_08765 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D RBG61_09690 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RBG61_04915 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RBG61_01140 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RBG61_10325 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RBG61_00300 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RBG61_09590 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RBG61_01695 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RBG61_07895 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RBG61_08300 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RBG61_00195 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RBG61_10245 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RBG61_06865 GNAT family protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D RBG61_10755 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D RBG61_09830 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D RBG61_10710 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RBG61_09015 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RBG61_11170 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RBG61_13910 ribonuclease III domain-containing protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D RBG61_04620 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RBG61_10340 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RBG61_12490 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D RBG61_04550 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D RBG61_07110 hflX; GTPase HflX K03665 hflX; GTPase
D RBG61_09745 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RBG61_10360 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RBG61_13635 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D RBG61_13610 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D RBG61_07200 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D RBG61_03135 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D RBG61_01720 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D RBG61_03155 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein
D RBG61_03875 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D RBG61_12505 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:palm03016]
D RBG61_04960 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RBG61_00910 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBG61_08340 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RBG61_00185 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RBG61_03130 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBG61_02210 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RBG61_08620 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBG61_02500 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RBG61_07550 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBG61_08190 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RBG61_10890 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RBG61_09025 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RBG61_05985 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RBG61_07130 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RBG61_10725 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RBG61_03725 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RBG61_07555 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RBG61_05220 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RBG61_05225 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RBG61_11445 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBG61_04865 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RBG61_10365 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RBG61_08205 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RBG61_09800 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RBG61_01160 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RBG61_13645 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RBG61_07740 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBG61_08930 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBG61_09745 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RBG61_00150 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RBG61_07160 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RBG61_07155 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RBG61_07180 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RBG61_04180 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RBG61_04360 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D RBG61_05155 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RBG61_10230 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RBG61_00130 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RBG61_09850 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RBG61_03190 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RBG61_09835 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RBG61_11460 class I SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D RBG61_02585 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RBG61_03205 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D RBG61_04085 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RBG61_07750 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RBG61_13855 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RBG61_02300 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D RBG61_13850 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RBG61_08935 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D RBG61_05545 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RBG61_02795 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RBG61_10255 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RBG61_02790 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RBG61_04295 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RBG61_10825 nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D RBG61_04570 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RBG61_02975 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:palm03012]
D RBG61_13630 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RBG61_03220 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RBG61_09065 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RBG61_01340 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RBG61_09950 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RBG61_09710 elongation factor G K02355 fusA; elongation factor G
D RBG61_09945 fusA; elongation factor G K02355 fusA; elongation factor G
D RBG61_09750 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RBG61_02960 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D RBG61_10695 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RBG61_08640 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RBG61_05710 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RBG61_03100 efp; elongation factor P K02356 efp; elongation factor P
D RBG61_00855 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:palm03110]
D RBG61_00125 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RBG61_04510 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RBG61_12290 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RBG61_10850 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBG61_08110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBG61_10855 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RBG61_12670 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D RBG61_10845 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RBG61_08115 co-chaperone GroES K04078 groES; chaperonin GroES
D RBG61_03845 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RBG61_05535 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RBG61_07390 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RBG61_05365 hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RBG61_05375 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RBG61_02270 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RBG61_07905 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RBG61_04470 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RBG61_10735 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RBG61_10740 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RBG61_03475 trxA; thioredoxin K03671 TXN; thioredoxin
D RBG61_01065 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:palm04131]
D RBG61_02190 SPFH domain-containing protein K07192 FLOT; flotillin
D RBG61_05130 glycoside hydrolase family 38 C-terminal domain-containing protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RBG61_05180 glycoside hydrolase family 38 C-terminal domain-containing protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RBG61_05250 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RBG61_10200 glycoside hydrolase family 38 C-terminal domain-containing protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D RBG61_11140 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBG61_06280 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RBG61_12290 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:palm03051]
D RBG61_12290 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:palm03032]
D RBG61_07735 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RBG61_03075 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RBG61_07190 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RBG61_05550 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RBG61_01585 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D RBG61_03785 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RBG61_12465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBG61_01305 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBG61_02930 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RBG61_07195 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBG61_08215 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RBG61_11200 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RBG61_07945 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RBG61_04545 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RBG61_10235 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBG61_01520 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RBG61_07225 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RBG61_09215 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RBG61_07215 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RBG61_09210 toprim domain-containing protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RBG61_03195 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:palm03036]
D RBG61_03180 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RBG61_02190 SPFH domain-containing protein K07192 FLOT; flotillin
D RBG61_03075 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RBG61_07190 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RBG61_00155 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RBG61_03170 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D RBG61_09565 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D RBG61_09570 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D RBG61_02530 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RBG61_01095 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RBG61_03590 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D RBG61_03605 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D RBG61_02525 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RBG61_03585 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RBG61_07310 cell division protein ZapA K09888 zapA; cell division protein ZapA
D RBG61_06800 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBG61_11610 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBG61_13355 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBG61_06015 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RBG61_07565 P-loop NTPase K03609 minD; septum site-determining protein MinD
D RBG61_00180 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D RBG61_00170 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D RBG61_07585 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBG61_00875 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBG61_07580 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RBG61_02780 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; rod shape determining protein RodA
D RBG61_07140 ParA family protein K03496 parA; chromosome partitioning protein
D RBG61_12035 ParA family protein K03496 parA; chromosome partitioning protein
D RBG61_12860 ParA family protein K03496 parA; chromosome partitioning protein
D RBG61_06045 ParA family protein K03496 parA; chromosome partitioning protein
D RBG61_06380 ParA family protein K03496 parA; chromosome partitioning protein
D RBG61_07135 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_07145 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_12030 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_12865 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_06390 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_07155 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RBG61_07150 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RBG61_03190 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RBG61_02650 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
D RBG61_01300 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:palm03400]
D RBG61_11230 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RBG61_01245 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RBG61_13825 DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D RBG61_12450 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RBG61_04020 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RBG61_10945 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RBG61_00655 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RBG61_07320 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RBG61_09395 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RBG61_02540 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RBG61_03115 TIM barrel protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RBG61_10355 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RBG61_01520 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RBG61_10235 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RBG61_01670 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RBG61_01680 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RBG61_12305 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RBG61_01840 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBG61_02130 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RBG61_09925 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RBG61_09930 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RBG61_05685 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RBG61_10295 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RBG61_08645 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RBG61_00140 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RBG61_01700 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D RBG61_00145 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RBG61_13735 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RBG61_13740 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RBG61_01305 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RBG61_02930 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RBG61_07195 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RBG61_08215 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RBG61_11200 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RBG61_07945 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RBG61_12465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBG61_00865 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RBG61_10700 recA; recombinase RecA K03553 recA; recombination protein RecA
D RBG61_01125 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RBG61_01130 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RBG61_01120 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RBG61_10300 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RBG61_00095 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D RBG61_00100 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D RBG61_13360 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RBG61_07205 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RBG61_08295 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RBG61_01705 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RBG61_07960 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D RBG61_13775 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RBG61_11600 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RBG61_11595 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RBG61_06680 Ku protein K10979 ku; DNA end-binding protein Ku
D RBG61_11745 Ku protein K10979 ku; DNA end-binding protein Ku
D RBG61_06675 RNA ligase family protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RBG61_11750 RNA ligase family protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RBG61_07225 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RBG61_09215 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RBG61_07215 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RBG61_09210 toprim domain-containing protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RBG61_03195 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RBG61_03075 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RBG61_03350 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RBG61_06660 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RBG61_11770 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RBG61_01115 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RBG61_10705 RecX family transcriptional regulator K03565 recX; regulatory protein
D RBG61_02305 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RBG61_13640 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:palm03029]
D RBG61_13630 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RBG61_03220 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RBG61_01340 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RBG61_09950 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RBG61_09710 elongation factor G K02355 fusA; elongation factor G
D RBG61_09945 fusA; elongation factor G K02355 fusA; elongation factor G
D RBG61_01710 era; GTPase Era K03595 era; GTPase
D RBG61_11445 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RBG61_03130 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RBG61_07550 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RBG61_09025 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RBG61_08620 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RBG61_01510 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RBG61_01505 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RBG61_01515 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RBG61_12465 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RBG61_10850 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBG61_10845 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RBG61_08110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBG61_08115 co-chaperone GroES K04078 groES; chaperonin GroES
D RBG61_10855 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RBG61_07740 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBG61_08930 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBG61_07170 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RBG61_12290 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:palm02000]
D RBG61_07300 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_07305 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_04335 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_08330 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_04330 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_08325 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RBG61_03045 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RBG61_03520 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RBG61_03515 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D RBG61_04685 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D RBG61_11005 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D RBG61_11630 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RBG61_11620 ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D RBG61_11625 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RBG61_03040 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RBG61_03035 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D RBG61_03030 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D RBG61_02810 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RBG61_00800 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D RBG61_00795 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RBG61_00790 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D RBG61_12150 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_12240 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_12245 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_12250 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_05165 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_08875 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D RBG61_05175 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D RBG61_08880 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein
D RBG61_05170 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D RBG61_08885 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D RBG61_07435 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RBG61_07470 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D RBG61_07445 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein
D RBG61_07440 mglA; galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D RBG61_12160 extracellular solute-binding protein K25067 fcsSBP; fucose transport system substrate-binding protein
D RBG61_12195 extracellular solute-binding protein K25067 fcsSBP; fucose transport system substrate-binding protein
D RBG61_12165 sugar ABC transporter permease K25068 K25068; fucose transport system permease protein
D RBG61_12170 carbohydrate ABC transporter permease K25069 K25069; fucose transport system permease protein
D RBG61_02385 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RBG61_02380 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D RBG61_04385 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RBG61_04375 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RBG61_04370 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RBG61_04380 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RBG61_05210 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D RBG61_05215 ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D RBG61_10960 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBG61_12065 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBG61_00025 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBG61_00030 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBG61_00035 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBG61_00040 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RBG61_10965 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBG61_12070 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBG61_10140 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RBG61_10970 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RBG61_12075 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RBG61_10145 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RBG61_07085 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D RBG61_07080 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D RBG61_07075 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RBG61_07070 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RBG61_08310 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D RBG61_08315 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D RBG61_08305 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RBG61_00840 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBG61_09955 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RBG61_09965 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RBG61_09970 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D RBG61_09975 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D RBG61_09960 ABC transporter permease K16200 dppB1; dipeptide transport system permease protein
D RBG61_00325 ABC transporter ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D RBG61_00315 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RBG61_00320 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RBG61_08860 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D RBG61_08445 energy-coupling factor ABC transporter substrate-binding protein K02009 cbiN; cobalt/nickel transport protein
D RBG61_08450 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D RBG61_08440 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D RBG61_08455 ATP-binding cassette domain-containing protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RBG61_10640 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RBG61_01155 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D RBG61_01145 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RBG61_01150 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RBG61_08980 ABC transporter permease subunit K25151 gldF; gliding motility-associated transport system permease protein
D RBG61_08975 ATP-binding cassette domain-containing protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D RBG61_08985 Gldg family protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D RBG61_05630 ABC transporter permease K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D RBG61_05635 ABC transporter permease K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D RBG61_05640 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D RBG61_04730 ABC transporter permease subunit K25147 berB; beta-exotoxin I transport system permease protein
D RBG61_04725 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D RBG61_06725 ABC transporter ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D RBG61_02525 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RBG61_02530 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RBG61_03935 ABC-2 transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RBG61_06715 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RBG61_07020 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D RBG61_07035 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RBG61_03940 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBG61_06720 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBG61_07010 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBG61_07030 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBG61_07045 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBG61_07250 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBG61_11695 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBG61_04825 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBG61_09365 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RBG61_02755 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RBG61_04040 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RBG61_12085 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RBG61_12605 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RBG61_10155 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RBG61_02760 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RBG61_04045 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RBG61_00010 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RBG61_09060 cation:proton antiporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
D RBG61_08590 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D RBG61_05880 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D RBG61_06035 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBG61_02335 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBG61_09225 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBG61_05270 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBG61_08870 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBG61_09040 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBG61_10955 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RBG61_12330 OFA family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D RBG61_07345 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D RBG61_07350 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D RBG61_11455 MFS transporter K08222 yqgE; MFS transporter, YQGE family, putative transporter
D RBG61_12840 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RBG61_04765 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RBG61_12835 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBG61_04760 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBG61_09840 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBG61_09845 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RBG61_04775 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RBG61_12830 nagE; N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RBG61_01560 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D RBG61_10925 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D RBG61_02740 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D RBG61_04885 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D RBG61_06130 motility protein A K02556 motA; chemotaxis protein MotA
D RBG61_04880 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RBG61_06125 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RBG61_03580 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D RBG61_11010 CorA family divalent cation transporter K03284 corA; magnesium transporter
D RBG61_08270 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBG61_12155 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBG61_05055 endospore germination permease K06296 gerKB; spore germination protein KB
D RBG61_12620 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D RBG61_04935 L-lactate permease K03303 lutP; lactate permease
D RBG61_10585 cax; calcium/proton exchanger K07300 chaA; Ca2+:H+ antiporter
D RBG61_07410 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D RBG61_13525 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D RBG61_05145 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D RBG61_03880 NAD-binding protein K03499 trkA; trk/ktr system potassium uptake protein
D RBG61_03885 NAD-binding protein K03499 trkA; trk/ktr system potassium uptake protein
D RBG61_13515 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D RBG61_13520 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D RBG61_13545 NAD-binding protein K03499 trkA; trk/ktr system potassium uptake protein
D RBG61_13550 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D RBG61_07890 solute carrier family 23 protein K02824 uraA; uracil permease
D RBG61_02410 permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RBG61_02420 uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RBG61_00900 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RBG61_01825 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D RBG61_03260 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D RBG61_05140 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D RBG61_03085 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B
D RBG61_11295 oligosaccharide flippase family protein K06409 spoVB; stage V sporulation protein B
D RBG61_03840 AEC family transporter K24180 mleP; malate permease and related proteins
D RBG61_07705 AEC family transporter K24180 mleP; malate permease and related proteins
D RBG61_09030 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D RBG61_09035 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D RBG61_03090 ECF transporter S component K23675 fmnP; riboflavin transporter
D RBG61_07720 energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter
D RBG61_03605 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D RBG61_13845 manganese efflux pump MntP family protein K23242 mntP; manganese efflux pump family protein
D RBG61_06330 FTR1 family protein K07243 FTR; high-affinity iron transporter
D RBG61_08095 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RBG61_08025 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_04645 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_09675 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RBG61_09610 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D RBG61_09600 carboxyl transferase domain-containing protein K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D RBG61_09605 biotin/lipoyl-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RBG61_05045 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D RBG61_03910 FeoA family protein K04758 feoA; ferrous iron transport protein A
D RBG61_03905 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D RBG61_07910 TspO/MBR family protein K05770 TSPO; translocator protein
D RBG61_02445 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:palm02044]
D RBG61_06520 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RBG61_08820 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RBG61_08825 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
D RBG61_08785 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D RBG61_10010 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D RBG61_08790 pilM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D RBG61_08830 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RBG61_10035 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D RBG61_12875 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RBG61_06525 RcpC/CpaB family pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D RBG61_06535 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBG61_11960 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBG61_12890 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBG61_06555 hypothetical protein K12511 tadC; tight adherence protein C
D RBG61_08835 prepilin-type N-terminal cleavage/methylation domain-containing protein K10924 mshA; MSHA pilin protein MshA
D RBG61_08410 deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RBG61_06670 MBL fold metallo-hydrolase K02238 comEC; competence protein ComEC
D RBG61_01105 MBL fold metallo-hydrolase K02238 comEC; competence protein ComEC
D RBG61_08040 late competence development ComFB family protein K02241 comFB; competence protein ComFB
D RBG61_06040 late competence development ComFB family protein K02241 comFB; competence protein ComFB
D RBG61_06080 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RBG61_06085 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RBG61_07790 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D RBG61_06180 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RBG61_06170 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D RBG61_06165 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RBG61_06115 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D RBG61_06105 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RBG61_06100 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RBG61_06095 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RBG61_06090 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RBG61_11885 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RBG61_13010 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RBG61_01025 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RBG61_01045 SecD/SecF family protein translocase subunit K03072 secD; preprotein translocase subunit SecD
D RBG61_05420 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RBG61_01050 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RBG61_04565 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RBG61_05730 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RBG61_09815 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RBG61_03165 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RBG61_00225 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RBG61_07170 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:palm02042]
D RBG61_08270 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBG61_12155 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RBG61_08240 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:palm02022]
D RBG61_07055 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RBG61_02680 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RBG61_13535 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RBG61_02675 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RBG61_13540 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RBG61_03975 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
D RBG61_12415 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D RBG61_07780 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RBG61_04115 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBG61_06110 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBG61_07770 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RBG61_07460 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D RBG61_02360 response regulator K07720 yesN; two-component system, response regulator YesN
D RBG61_07455 response regulator K07720 yesN; two-component system, response regulator YesN
D RBG61_12180 response regulator K07720 yesN; two-component system, response regulator YesN
D RBG61_12635 helix-turn-helix domain-containing protein K07720 yesN; two-component system, response regulator YesN
D RBG61_00760 ANTAR domain-containing protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:palm02035]
D RBG61_07780 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RBG61_07795 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBG61_07800 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RBG61_06055 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D RBG61_06050 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RBG61_07775 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RBG61_07770 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RBG61_04115 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBG61_06110 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RBG61_07805 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_04490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_10225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_10650 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_10655 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RBG61_06170 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D RBG61_06165 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RBG61_06160 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ
D RBG61_06105 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D RBG61_06100 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RBG61_06095 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RBG61_06090 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RBG61_06080 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RBG61_06085 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RBG61_06175 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RBG61_06120 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RBG61_06115 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D RBG61_06180 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RBG61_06185 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RBG61_06195 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RBG61_06190 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RBG61_06150 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D RBG61_06070 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D RBG61_06065 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D RBG61_06140 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D RBG61_06210 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RBG61_06215 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RBG61_06235 flagellin K02406 fliC; flagellin
D RBG61_06255 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D RBG61_06250 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D RBG61_06075 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RBG61_04885 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D RBG61_06130 motility protein A K02556 motA; chemotaxis protein MotA
D RBG61_04880 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RBG61_06125 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RBG61_06225 fliW; flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D RBG61_06135 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D RBG61_08830 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RBG61_10035 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D RBG61_08825 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
D RBG61_08785 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D RBG61_10010 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D RBG61_06520 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RBG61_08820 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RBG61_08790 pilM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D RBG61_12875 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RBG61_06525 RcpC/CpaB family pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D RBG61_06535 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBG61_11960 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RBG61_12890 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins [BR:palm03037]
D RBG61_09060 cation:proton antiporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
C 04812 Cytoskeleton proteins [BR:palm04812]
D RBG61_07585 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBG61_00875 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBG61_03585 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RBG61_07565 P-loop NTPase K03609 minD; septum site-determining protein MinD
D RBG61_07140 ParA family protein K03496 parA; chromosome partitioning protein
D RBG61_12035 ParA family protein K03496 parA; chromosome partitioning protein
D RBG61_12860 ParA family protein K03496 parA; chromosome partitioning protein
D RBG61_06045 ParA family protein K03496 parA; chromosome partitioning protein
D RBG61_06380 ParA family protein K03496 parA; chromosome partitioning protein
D RBG61_07135 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_07145 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_12030 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_12865 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RBG61_06390 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:palm04147]
D RBG61_12290 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RBG61_11140 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RBG61_02575 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RBG61_06280 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RBG61_04540 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RBG61_02190 SPFH domain-containing protein K07192 FLOT; flotillin
D RBG61_08110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RBG61_10850 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RBG61_03565 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RBG61_07120 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RBG61_09950 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D RBG61_08205 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RBG61_05725 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RBG61_00895 phosphoribosyltransferase family protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RBG61_09235 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RBG61_09230 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RBG61_02440 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RBG61_12175 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RBG61_13605 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RBG61_10115 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RBG61_11485 galactokinase family protein K00849 galK; galactokinase [EC:2.7.1.6]
D RBG61_03690 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RBG61_04230 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00720 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_00755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RBG61_08505 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RBG61_07270 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RBG61_07480 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RBG61_12100 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RBG61_02570 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:palm02048]
D RBG61_03300 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RBG61_03320 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RBG61_01885 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D RBG61_01890 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D RBG61_08365 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RBG61_13185 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D RBG61_03585 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RBG61_07585 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBG61_00875 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RBG61_00910 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RBG61_07740 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RBG61_08930 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:palm01504]
D RBG61_09635 AAC(3) family N-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D RBG61_12530 aminoglycoside 6-adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D RBG61_09095 aminoglycoside 6-adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D RBG61_07410 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D RBG61_04685 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D RBG61_07345 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D RBG61_07350 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D RBG61_08180 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D RBG61_13455 CatA-like O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D RBG61_01675 catA; type A chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D RBG61_10125 extracellular solute-binding protein K02172 blaR1; bla regulator protein blaR1
D RBG61_00045 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D RBG61_10135 extracellular solute-binding protein K02172 blaR1; bla regulator protein blaR1
D RBG61_00050 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RBG61_10120 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RBG61_10130 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RBG61_03985 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_07690 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_13495 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RBG61_05595 VanW family protein K18346 vanW; vancomycin resistance protein VanW
D RBG61_03975 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:palm00537]
D RBG61_04540 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:palm03100]
D RBG61_03385 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RBG61_09525 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D RBG61_01745 iorA; indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D RBG61_01740 indolepyruvate oxidoreductase subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D RBG61_06945 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D RBG61_01660 FprA family A-type flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D RBG61_01765 (2Fe-2S) ferredoxin domain-containing protein K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D RBG61_01760 nuoF; NADH-quinone oxidoreductase subunit NuoF K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D RBG61_04900 desulfoferrodoxin family protein K05919 dfx; superoxide reductase [EC:1.15.1.2]
D RBG61_01775 NAD(P)H-dependent oxidoreductase subunit E K22340 hylC; formate dehydrogenase (NAD+, ferredoxin) subunit C [EC:1.17.1.11]
D RBG61_00215 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RBG61_06340 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RBG61_13425 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RBG61_04990 radical SAM protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D RBG61_00835 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D RBG61_07685 pflA; pyruvate formate-lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RBG61_11315 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RBG61_12220 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RBG61_10070 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RBG61_04485 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RBG61_13345 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D RBG61_04140 protein-glutamine gamma-glutamyltransferase K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D RBG61_12185 glycoside hydrolase family 65 protein K18783 E2.4.1.279; nigerose phosphorylase [EC:2.4.1.279]
D RBG61_05260 glycoside hydrolase family 130 protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D RBG61_00260 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RBG61_01325 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RBG61_05005 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RBG61_01185 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RBG61_08285 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D RBG61_01535 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D RBG61_01785 ATP-binding protein K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D RBG61_04805 spoIIAB; anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D RBG61_02160 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D RBG61_00120 protein arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D RBG61_08680 alpha/beta hydrolase family protein K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D RBG61_08690 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RBG61_00905 SpoIIE family protein phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D RBG61_03120 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D RBG61_05560 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D RBG61_02205 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RBG61_08220 DUF4093 domain-containing protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D RBG61_00590 glycoside hydrolase family 31 protein K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D RBG61_10305 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RBG61_12580 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RBG61_05200 polysaccharide deacetylase family protein K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D RBG61_05290 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RBG61_10595 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RBG61_10240 low molecular weight protein arginine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D RBG61_13430 sugar phosphate isomerase/epimerase family protein K23248 oiaC; 3-oxoisoapionate decarboxylase [EC:4.1.1.120]
D RBG61_06950 nspC; carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
D RBG61_02825 spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D RBG61_09005 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RBG61_09490 ATP-grasp domain-containing protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D RBG61_03825 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D RBG61_01200 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D RBG61_01195 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D RBG61_04345 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RBG61_09715 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RBG61_10625 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RBG61_01205 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D RBG61_03820 Rnf-Nqr domain containing protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D RBG61_01210 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D RBG61_03815 Rnf-Nqr domain containing protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D RBG61_01215 electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D RBG61_07745 nifU; Fe-S cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D RBG61_02225 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RBG61_06310 VOC family protein K08234 yaeR; glyoxylase I family protein
D RBG61_00165 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RBG61_12740 lysylphosphatidylglycerol synthase transmembrane domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RBG61_07680 Tex family protein K06959 tex; protein Tex
D RBG61_10285 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A
D RBG61_07210 DUF370 domain-containing protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D RBG61_03050 S1 RNA-binding domain-containing protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D RBG61_00115 UvrB/UvrC motif-containing protein K19411 mcsA; protein arginine kinase activator
D RBG61_04520 tig; trigger factor K03545 tig; trigger factor
D RBG61_07965 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RBG61_07295 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D RBG61_03830 adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D RBG61_02435 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D RBG61_01685 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D RBG61_03200 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D RBG61_01375 replication initiation factor domain-containing protein K07467 nicK; putative DNA relaxase
D RBG61_01430 replication initiation factor domain-containing protein K07467 nicK; putative DNA relaxase
D RBG61_08685 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D RBG61_09175 transposase K07483 K07483; transposase
D RBG61_00365 IS110 family transposase K07486 K07486; transposase
D RBG61_04895 IS110 family transposase K07486 K07486; transposase
D RBG61_03750 transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_04310 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_07660 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_07950 transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_08350 transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_08355 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_10875 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_11665 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_12475 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_12780 transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_12945 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_01265 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_05860 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_10095 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_13930 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D RBG61_10105 IS256 family transposase K07493 K07493; putative transposase
D RBG61_11715 IS3 family transposase K07497 K07497; putative transposase
D RBG61_01610 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D RBG61_02115 type I restriction endonuclease K07504 K07504; predicted type IV restriction endonuclease
D RBG61_07955 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RBG61_12770 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RBG61_01570 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RBG61_08725 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D RBG61_02850 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D RBG61_07095 pro-sigmaK processing inhibitor BofA family protein K06317 bofA; inhibitor of the pro-sigma K processing machinery
D RBG61_13305 spore coat protein CotJB K06333 cotJB; spore coat protein JB
D RBG61_13200 Mn-containing catalase K06334 cotJC; spore coat protein JC
D RBG61_07165 jag; RNA-binding cell elongation regulator Jag/EloR K06346 jag; spoIIIJ-associated protein
D RBG61_05515 spore maturation protein A K06373 spmA; spore maturation protein A
D RBG61_05520 spore maturation protein K06374 spmB; spore maturation protein B
D RBG61_04810 STAS domain-containing protein K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D RBG61_00250 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D RBG61_04595 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D RBG61_11590 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D RBG61_13680 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D RBG61_13685 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D RBG61_13690 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D RBG61_13695 SpoIIIAC/SpoIIIAD family protein K06393 spoIIIAD; stage III sporulation protein AD
D RBG61_13700 hypothetical protein K06394 spoIIIAE; stage III sporulation protein AE
D RBG61_13710 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D RBG61_13715 SpoIIIAH-like family protein K06397 spoIIIAH; stage III sporulation protein AH
D RBG61_03275 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D RBG61_06790 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D RBG61_06785 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D RBG61_06780 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D RBG61_06030 dpsA; dipicolinate synthase subunit DpsA K06410 spoVFA; dipicolinate synthase subunit A
D RBG61_06025 dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D RBG61_08395 SpoVG family protein K06412 spoVG; stage V sporulation protein G
D RBG61_05075 glycosyltransferase family protein K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D RBG61_01350 alpha/beta-type small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D RBG61_02280 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D RBG61_02135 spore germination protein K06295 gerKA; spore germination protein KA
D RBG61_05065 spore germination protein K06295 gerKA; spore germination protein KA
D RBG61_02145 Ger(x)C family spore germination protein K06297 gerKC; spore germination protein KC
D RBG61_05060 Ger(x)C family spore germination protein K06297 gerKC; spore germination protein KC
D RBG61_08925 ypeB; germination protein YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D RBG61_02200 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D RBG61_11550 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D RBG61_01725 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D RBG61_13590 glycoside hydrolase family 25 protein K07273 acm; lysozyme
D RBG61_05135 GH25 family lysozyme K07273 acm; lysozyme
D RBG61_12080 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D RBG61_07065 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D RBG61_01500 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D RBG61_11345 bacteriohemerythrin K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RBG61_02155 phosphatase K04477 ycdX; putative hydrolase
D RBG61_08840 PHP domain-containing protein K04477 ycdX; putative hydrolase
D RBG61_08845 hypothetical protein K04477 ycdX; putative hydrolase
D RBG61_02995 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RBG61_12525 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RBG61_05855 LemA family protein K03744 lemA; LemA protein
D RBG61_10770 ElyC/SanA/YdcF family protein K03748 sanA; SanA protein
D RBG61_04350 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D RBG61_04575 PH domain-containing protein K08981 K08981; putative membrane protein
C 99997 Function unknown
D RBG61_00240 scfB; thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein
D RBG61_08965 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D RBG61_00695 hypothetical protein K06921 K06921; uncharacterized protein
D RBG61_09825 KH domain-containing protein K06960 K06960; uncharacterized protein
D RBG61_10315 zinc metallopeptidase K06973 K06973; uncharacterized protein
D RBG61_10540 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D RBG61_09665 amidohydrolase family protein K07045 K07045; uncharacterized protein
D RBG61_11330 aldo/keto reductase K07079 K07079; uncharacterized protein
D RBG61_09720 aldo/keto reductase K07079 K07079; uncharacterized protein
D RBG61_10835 permease K07089 K07089; uncharacterized protein
D RBG61_13415 permease K07089 K07089; uncharacterized protein
D RBG61_03765 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RBG61_03770 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RBG61_04185 TSUP family transporter K07090 K07090; uncharacterized protein
D RBG61_12540 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RBG61_04525 metallophosphoesterase K07099 K07099; uncharacterized protein
D RBG61_00685 ATP-binding protein K07133 K07133; uncharacterized protein
D RBG61_09335 ATP-binding protein K07133 K07133; uncharacterized protein
D RBG61_00075 FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D RBG61_01525 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D RBG61_01285 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D RBG61_07175 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D RBG61_11545 PFL family protein K09157 K09157; uncharacterized protein
D RBG61_12310 HD domain-containing protein K09163 K09163; uncharacterized protein
D RBG61_04580 PH domain-containing protein K09167 K09167; uncharacterized protein
D RBG61_08730 glycoside hydrolase family 125 protein K09704 K09704; uncharacterized protein
D RBG61_06060 FapA family protein K09749 K09749; uncharacterized protein
D RBG61_04975 DUF503 domain-containing protein K09764 K09764; uncharacterized protein
D RBG61_12520 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D RBG61_13750 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D RBG61_10795 DUF378 domain-containing protein K09779 K09779; uncharacterized protein
D RBG61_09810 YlxM family DNA-binding protein K09787 K09787; uncharacterized protein
D RBG61_12725 ThuA domain-containing protein K09992 K09992; uncharacterized protein
D RBG61_01870 phosphatidylglycerol lysyltransferase domain-containing protein K01163 K01163; uncharacterized protein
D RBG61_13895 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D RBG61_01565 DUF47 family protein K07220 K07220; uncharacterized protein
D RBG61_13620 YlxR family protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024