+D	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Prokaryotic Defense System - Pantoea sp. PSNIH2</h2>
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A<b>CRISPR-Cas system</b>
B  Universal Cas proteins
B  Type I CRISPR-Cas system
C    Type I signiture cas proteins
C    Subtype I-A factors
C    Subtype I-B factors
C    Subtype I-C factors
C    Subtype I-D factors
C    Subtype I-E factors
C    Subtype I-F factors
C    Subtype I-U factors
B  Type II CRISPR-Cas system
C    Type II signiture cas proteins
C    Subtype II-A factors
C    Subtype II-B factors
B  Type III CRISPR-Cas system
C    Type III signiture cas proteins
C    Subtype III-A factors
C    Subtype III-B factors
C    Subtype III-U factors
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A<b>Restriction and modification system (R-M system)</b>
B  Type I R-M system
C    PSNIH2_01480 Restriction endonuclease, type I, EcoRI, R subunit/Type III	K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] 
C    PSNIH2_01500 restriction endonuclease subunit M	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] 
B  Type II R-M system
C    Restriction endonucleases
C    DNA methyltransferases
D      PSNIH2_18930 DNA adenine methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
D      PSNIH2_20995 DNA modification methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
D      PSNIH2_21775 DNA cytosine methylase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
D      PSNIH2_20155 DNA methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
D      PSNIH2_20845 DNA methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
D      PSNIH2_05570 hypothetical protein	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
D      PSNIH2_19775 modification methylase EcoRII	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
B  Type III R-M system
B  Type IV R-M system
C    PSNIH2_23120 HNH endonuclease	K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] 
C    PSNIH2_19785 TetR family transcriptional regulator	K07448 mrr; restriction system protein 
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A<b>Toxin-antitoxin system (TA system)</b>
B  Type I TA system
C    Hok-Sok
C    SymE-SymR
D      PSNIH2_09395 endoribonuclease symE	K19048 symE; toxic protein SymE 
C    Ldr-Rdl
C    TisB-IstR
C    Ibs-Sib
C    ShoB-OhsC
C    RalR-RalA
B  Type II TA system
C    MazF-MazE
C    ChpB-ChpS
C    YhaV-PrlF
D      PSNIH2_06600 toxin YhaV	K19155 yhaV; toxin YhaV [EC:3.1.-.-] 
D      PSNIH2_06595 AbrB family transcriptional regulator	K19156 prlF; antitoxin PrlF 
C    RelE/StbE-RelB/StbD
D      PSNIH2_22165 RelE toxin	K06218 relE; mRNA interferase RelE/StbE 
D      PSNIH2_22170 bifunctional antitoxin/transcriptional repressor RelB	K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB 
C    YafQ-dinJ
D      PSNIH2_21065 damage-inducible protein J	K07473 dinJ; DNA-damage-inducible protein J 
C    YoeB-YefM
C    HipA-HipB
D      PSNIH2_22330 transcriptional regulator	K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB 
C    HicA-HicB
C    YafO-YafN
C    Hha-TomB
D      PSNIH2_12600 gene expression modulator	K05839 hha; haemolysin expression modulating protein 
D      PSNIH2_22430 regulatory protein	K05839 hha; haemolysin expression modulating protein 
D      PSNIH2_12595 Hha toxicity attenuator	K19162 tomB; hha toxicity modulator TomB 
C    PspC-PspB
D      PSNIH2_07775 transcriptional regulator	K03973 pspC; phage shock protein C 
D      PSNIH2_07770 pspB; phage shock protein	K03970 pspB; phage shock protein B 
C    CcdB-CcdA
C    ParE-ParD
C    Doc-Phd
C    HigB-HigA
C    MqsR-MqsA
C    VapC-VapB
D      PSNIH2_03315 plasmid maintenance protein	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] 
D      PSNIH2_02505 twitching motility protein PilT	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] 
D      PSNIH2_03310 antitoxin	K18829 mvpT; antitoxin VapB 
D      PSNIH2_02510 virulence factor	K18829 mvpT; antitoxin VapB 
C    PezT-PezA
C    YobL-YobK
C    YokI-YokJ
C    YqcG-YqcF
C    YxiD-YxxD
C    FitB-FitA
C    BC_0920-BC_0921
C    Type II TA system related factors
D      PSNIH2_14265 hypothetical protein	K19334 tabA; biofilm protein TabA 
D      PSNIH2_14420 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ 
D      PSNIH2_16165 rod shape-determining protein MreB	K03569 mreB; rod shape-determining protein MreB and related proteins 
D      PSNIH2_01285 DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] 
D      PSNIH2_01265 DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] 
D      PSNIH2_03785 gltX; glutamyl-tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
B  Type III TA system
C    AbiQ system
B  Type IV TA system
C    YeeV-YeeU
D      PSNIH2_15530 toxin YkfI	K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins 
D      PSNIH2_15535 Mu phage lytic protein YfjZ	K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins 
C    CptA-CptB
D      PSNIH2_01945 hypothetical protein	K19168 cptA; toxin CptA 
D      PSNIH2_01940 hypothetical protein	K09159 cptB; antitoxin CptB 
B  Type V TA system
C    GhoT-GhoS
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A<b>DNA phosphothiolation system</b>
B  Sulfur modification proteins
C    PSNIH2_03155 cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
C    PSNIH2_20825 phosphoadenosine phosphosulfate reductase	K19170 dndC; DNA sulfur modification protein DndC 
B  DNA phosphorothioation-dependent restriction proteins
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#Last updated: November 7, 2023