+D	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Prokaryotic Defense System - Pantoea sp. PSNIH1</h2>
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A<b>CRISPR-Cas system</b>
B  Universal Cas proteins
B  Type I CRISPR-Cas system
C    Type I signiture cas proteins
C    Subtype I-A factors
C    Subtype I-B factors
C    Subtype I-C factors
C    Subtype I-D factors
C    Subtype I-E factors
C    Subtype I-F factors
C    Subtype I-U factors
B  Type II CRISPR-Cas system
C    Type II signiture cas proteins
C    Subtype II-A factors
C    Subtype II-B factors
B  Type III CRISPR-Cas system
C    Type III signiture cas proteins
C    Subtype III-A factors
C    Subtype III-B factors
C    Subtype III-U factors
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A<b>Restriction and modification system (R-M system)</b>
B  Type I R-M system
B  Type II R-M system
C    Restriction endonucleases
C    DNA methyltransferases
D      PSNIH1_03430 DNA adenine methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
D      PSNIH1_03220 DNA adenine methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
D      PSNIH1_04615 DNA adenine methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
D      PSNIH1_19550 DNA modification methylase	K06223 dam; DNA adenine methylase [EC:2.1.1.72] 
D      PSNIH1_07895 restriction endonuclease SinI	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
D      PSNIH1_18580 modification methylase EcoRII	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
D      PSNIH1_20475 DNA cytosine methylase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
D      PSNIH1_15490 DNA cytosine methylase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
B  Type III R-M system
B  Type IV R-M system
C    PSNIH1_18590 TetR family transcriptional regulator	K07448 mrr; restriction system protein 
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A<b>Toxin-antitoxin system (TA system)</b>
B  Type I TA system
C    Hok-Sok
C    SymE-SymR
D      PSNIH1_09935 endoribonuclease symE	K19048 symE; toxic protein SymE 
C    Ldr-Rdl
C    TisB-IstR
C    Ibs-Sib
C    ShoB-OhsC
C    RalR-RalA
B  Type II TA system
C    MazF-MazE
C    ChpB-ChpS
C    YhaV-PrlF
D      PSNIH1_19265 hypothetical protein	K19156 prlF; antitoxin PrlF 
C    RelE/StbE-RelB/StbD
D      PSNIH1_p00025 RelE toxin	K06218 relE; mRNA interferase RelE/StbE 
D      PSNIH1_20080 RelE toxin	K06218 relE; mRNA interferase RelE/StbE 
D      PSNIH1_19275 hypothetical protein	K06218 relE; mRNA interferase RelE/StbE 
D      PSNIH1_p00020 bifunctional antitoxin/transcriptional repressor RelB	K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB 
D      PSNIH1_20075 bifunctional antitoxin/transcriptional repressor RelB	K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB 
C    YafQ-dinJ
D      PSNIH1_19480 damage-inducible protein J	K07473 dinJ; DNA-damage-inducible protein J 
C    YoeB-YefM
D      PSNIH1_p00135 toxin YoeB	K19158 yoeB; toxin YoeB [EC:3.1.-.-] 
D      PSNIH1_p00130 antitoxin YefM	K19159 yefM; antitoxin YefM 
C    HipA-HipB
D      PSNIH1_05880 serine/threonine protein kinase	K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] 
D      PSNIH1_15855 toxin HipA	K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] 
D      PSNIH1_05885 XRE family transcriptional regulator	K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB 
D      PSNIH1_19930 transcriptional regulator	K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB 
C    HicA-HicB
C    YafO-YafN
C    Hha-TomB
D      PSNIH1_09670 gene expression modulator	K05839 hha; haemolysin expression modulating protein 
D      PSNIH1_19830 regulatory protein	K05839 hha; haemolysin expression modulating protein 
D      PSNIH1_09675 Hha toxicity attenuator	K19162 tomB; hha toxicity modulator TomB 
C    PspC-PspB
D      PSNIH1_13840 transcriptional regulator	K03973 pspC; phage shock protein C 
D      PSNIH1_13845 pspB; phage shock protein	K03970 pspB; phage shock protein B 
C    CcdB-CcdA
C    ParE-ParD
C    Doc-Phd
D      PSNIH1_19220 hypothetical protein	K19165 phd; antitoxin Phd 
C    HigB-HigA
D      PSNIH1_p00820 Killer protein	K07334 higB-1; toxin HigB-1 
D      PSNIH1_p00815 XRE family transcriptional regulator	K21498 higA-1; antitoxin HigA-1 
C    MqsR-MqsA
D      PSNIH1_19290 XRE family transcriptional regulator	K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA 
C    VapC-VapB
C    PezT-PezA
C    YobL-YobK
C    YokI-YokJ
C    YqcG-YqcF
C    YxiD-YxxD
C    FitB-FitA
C    BC_0920-BC_0921
C    Type II TA system related factors
D      PSNIH1_11745 bssS; biofilm formation regulatory protein BssS	K12148 bssS; biofilm regulator BssS 
D      PSNIH1_08420 cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ 
D      PSNIH1_04105 rod shape-determining protein MreB	K03569 mreB; rod shape-determining protein MreB and related proteins 
D      PSNIH1_02925 DNA topoisomerase IV subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] 
D      PSNIH1_02950 DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] 
D      PSNIH1_00900 gltX; glutamyl-tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
B  Type III TA system
C    AbiQ system
B  Type IV TA system
C    YeeV-YeeU
C    CptA-CptB
D      PSNIH1_02385 hypothetical protein	K19168 cptA; toxin CptA 
D      PSNIH1_02390 hypothetical protein	K09159 cptB; antitoxin CptB 
B  Type V TA system
C    GhoT-GhoS
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A<b>DNA phosphothiolation system</b>
B  Sulfur modification proteins
C    PSNIH1_01390 cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
B  DNA phosphorothioation-dependent restriction proteins
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#Last updated: November 7, 2023