+D GENES KO #

  KEGG Orthology (KO) - Pantoea ananatis PA13

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:paq00010] D PAGR_g1281 glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2] D PAGR_g4029 glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAGR_g0164 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g2247 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g0529 fructose-1,6-bisphosphatase Fbp K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAGR_g0171 fructose-1,6-bisphosphatase class II GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D PAGR_g0714 fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0715 ketose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0612 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g1648 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0879 fructose-bisphosphate aldolase class II FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g2244 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0167 triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PAGR_g1985 glyceraldehyde-3-phosphate dehydrogenase GapA K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PAGR_g0878 phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PAGR_g3811 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g2959 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g3547 phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g3810 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAGR_g0960 enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAGR_g1902 pyruvate kinase II PykA K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAGR_g2386 pyruvate kinase I PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAGR_g2398 phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PAGR_g3455 pyruvate dehydrogenase E1 component AceE K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PAGR_g3454 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase AceF K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PAGR_g3453 dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAGR_g1482 putative alcohol dehydrogenase class III AdhC K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAGR_g2004 aldehyde-alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAGR_g3221 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PAGR_g1027 alcohol dehydrogenase YphC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PAGR_p231 cinnamyl alcohol dehydrogenase 2 YjgB K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D PAGR_g4005 zinc-type alcohol dehydrogenase-like protein YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAGR_g1035 zinc-type alcohol dehydrogenase-like protein YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAGR_g3972 alcohol dehydrogenase cytochrome c subunit AdhB K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g2582 aldehyde dehydrogenase AldA K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D PAGR_g3222 aldehyde dehydrogenase AldA K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D PAGR_g3983 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAGR_g2958 galactose-1-epimerase GalM K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D PAGR_g0539 aldose-1-epimerase YihR K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D PAGR_g2740 glucose-1-phosphatase Agp K01085 agp; glucose-1-phosphatase [EC:3.1.3.10] D PAGR_g0102 phosphatase YihX K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D PAGR_g3003 phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAGR_p104 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D PAGR_g1984 aldose 1-epimerase YeaD K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D PAGR_g0354 phosphoenolpyruvate carboxykinase PckA K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PAGR_g3273 beta-glucosidase YckE K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAGR_g0028 beta-glucosidase A BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAGR_p034 6-phospho-beta-glucosidase AscB K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAGR_g0897 6-phospho-beta-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAGR_g2577 beta-glucosidase BglB K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAGR_g1259 glucose-specific phosphotransferase enzyme IIA component Crr K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PAGR_g2655 PTS system glucose-specific EIICB component PtsG K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D PAGR_g2057 PTS system maltose- and glucose-specific EIICB component MalX K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D PAGR_g0741 PTS system glucose-specific EIICBA component PtsG K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D PAGR_p035 PTS system beta-glucoside-specific transporter subunit IIABC AscF K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:paq00020] D PAGR_g2989 citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1] D PAGR_g2042 aconitate hydratase 1 AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PAGR_g3450 aconitate hydratase AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D PAGR_g2628 isocitrate dehydrogenase Icd K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PAGR_g2984 2-oxoglutarate dehydrogenase E1 component SucA K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PAGR_g2983 2-oxoglutarate dehydrogenase E2 component SucB K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAGR_g3453 dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAGR_g2981 succinyl-CoA synthetase alpha chain SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PAGR_g2982 succinyl-CoA synthetase beta chain SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PAGR_g2986 succinate dehydrogenase flavoprotein subunit SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PAGR_g2985 succinate dehydrogenase iron-sulfur protein SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PAGR_g2988 succinate dehydrogenase cytochrome b556 subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PAGR_g2987 succinate dehydrogenase hydrophobic membrane anchor protein SdhD K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PAGR_p206 fumarate hydratase class I, aerobic FumA K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D PAGR_g2277 fumarate hydratase class II FumC K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PAGR_g0485 malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PAGR_p199 malate:quinone oxidoreductase Mqo K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D PAGR_g0226 malate:quinone oxidoreductase Mqo K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D PAGR_g0354 phosphoenolpyruvate carboxykinase PckA K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PAGR_g3455 pyruvate dehydrogenase E1 component AceE K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PAGR_g3454 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase AceF K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:paq00030] D PAGR_g4029 glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAGR_g1904 glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAGR_p105 glucose-6-phosphate 1-dehydrogenase Zwf2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAGR_g2948 6-phosphogluconolactonase Pgl K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D PAGR_p151 isomerase YkgB K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D PAGR_g1548 6-phosphogluconate dehydrogenase Gnd K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PAGR_p106 6-phosphogluconate dehydrogenase YqeC K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PAGR_g0370 ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PAGR_g1244 transketolase 2 TktB K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PAGR_g0876 transketolase 1 TktA K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PAGR_g2595 transketolase subunit B Dxs K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PAGR_g2596 transketolase subunit A TktB K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PAGR_g1245 transaldolase A TalA K00616 TALDO1; transaldolase [EC:2.2.1.2] D PAGR_g3538 transaldolase B TalB K00616 TALDO1; transaldolase [EC:2.2.1.2] D PAGR_g0885 ribose-5-phosphate isomerase A RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D PAGR_g0779 deoxyribose-phosphate aldolase DeoC K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D PAGR_g2230 ribokinase RbsK K00852 rbsK; ribokinase [EC:2.7.1.15] D PAGR_g3670 ribokinase RbsK K00852 rbsK; ribokinase [EC:2.7.1.15] D PAGR_g3566 ribokinase RbkS K00852 rbsK; ribokinase [EC:2.7.1.15] D PAGR_g0086 ribokinase RbsK K00852 rbsK; ribokinase [EC:2.7.1.15] D PAGR_g3628 ribokinase RbsK K00852 rbsK; ribokinase [EC:2.7.1.15] D PAGR_g1231 ribokinase RbsK K00852 rbsK; ribokinase [EC:2.7.1.15] D PAGR_g0781 phosphopentomutase DeoB K01839 deoB; phosphopentomutase [EC:5.4.2.7] D PAGR_g3003 phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAGR_g1637 phosphonate metabolism protein phnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D PAGR_g2469 ribose-phosphate pyrophosphokinase Prs K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAGR_g1905 KHG/KDPG aldolase Eda K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PAGR_p190 glucose-methanol-choline oxidoreductase K19813 gdh; glucose dehydrogenase [EC:1.1.5.9] D PAGR_g3962 PQQ-linked membrane-bound glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D PAGR_g3912 gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D PAGR_g1085 gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D PAGR_g3973 gluconate 2-dehydrogenase flavoprotein subunit K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D PAGR_g3974 gluconate 2-dehydrogenase subunit gamma K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D PAGR_g0013 2-ketogluconate reductase TkrA K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D PAGR_g0329 thermoresistant gluconokinase GntK K00851 idnK; gluconokinase [EC:2.7.1.12] D PAGR_g4138 2-dehydro-3-deoxygluconokinase KdgK K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D PAGR_g0015 2-dehydro-3-deoxygluconokinase KdgK K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D PAGR_g0714 fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0715 ketose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0612 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g1648 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0879 fructose-bisphosphate aldolase class II FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g2244 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0529 fructose-1,6-bisphosphatase Fbp K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAGR_g0171 fructose-1,6-bisphosphatase class II GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D PAGR_g0164 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g2247 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:paq00040] D PAGR_g3612 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D PAGR_g3613 2-deoxy-D-gluconate 3-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D PAGR_g3063 endo-polygalacturonase Peh K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15] D PAGR_g0577 uronate isomerase UxaC K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D PAGR_g0578 altronate oxidoreductase UxaB K00041 uxaB; tagaturonate reductase [EC:1.1.1.58] D PAGR_g0579 altronate hydrolase UxaA K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D PAGR_g0288 mannonate dehydratase UxuA K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D PAGR_g3606 mandelate racemase/muconate lactonizing protein RspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D PAGR_p076 mannitol-1-phosphate 5-dehydrogenase YdfI K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D PAGR_g1506 mannitol-1-phosphate 5-dehydrogenase YdfI K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D PAGR_g2524 beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D PAGR_g2000 UDP-glucose 6-dehydrogenase Udg K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PAGR_g1535 UTP--glucose-1-phosphate uridylyltransferase GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAGR_g1999 UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAGR_g3913 3-dehydro-L-gulonate 2-dehydrogenase DlgD K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130] D PAGR_g3916 cryptic L-xylulose kinase Lyx K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D PAGR_g3917 hexulose-6-phosphate synthase SgbH K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D PAGR_g3918 hexulose-6-phosphate isomerase SgbU K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D PAGR_g2050 L-ribulose-5-phosphate 4-epimerase AraD K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D PAGR_g3919 L-ribulose-5-phosphate 4-epimerase SgbE K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D PAGR_g0370 ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PAGR_g2287 L-arabinose isomerase AraA K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D PAGR_g2286 L-ribulokinase AraB K00853 araB; L-ribulokinase [EC:2.7.1.16] D PAGR_g0052 xylulose kinase XylB K00854 xylB; xylulokinase [EC:2.7.1.17] D PAGR_g1371 xylulose kinase XylB K00854 xylB; xylulokinase [EC:2.7.1.17] D PAGR_g2235 xylose isomerase XylA K01805 xylA; xylose isomerase [EC:5.3.1.5] D PAGR_g0051 xylose isomerase XylA K01805 xylA; xylose isomerase [EC:5.3.1.5] D PAGR_g1591 rhamnulokinase RhaB K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D PAGR_g1593 rhamnulose-1-phosphate aldolase RhaD K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D PAGR_g1370 D-arabinitol 4-dehydrogenase DalD K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11] D PAGR_g1647 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15] C 00051 Fructose and mannose metabolism [PATH:paq00051] D PAGR_g3256 manno(fructo)kinase Mak K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PAGR_g3946 fructokinase ScrK K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PAGR_g2278 mannose-6-phosphate isomerase ManA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PAGR_g1592 L-rhamnose isomerase RhaA K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14] D PAGR_g1591 rhamnulokinase RhaB K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D PAGR_g1593 rhamnulose-1-phosphate aldolase RhaD K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D PAGR_g1728 mannosyl-3-phosphoglycerate phosphatase YedP K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D PAGR_g0164 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g2247 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g0529 fructose-1,6-bisphosphatase Fbp K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAGR_g0171 fructose-1,6-bisphosphatase class II GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D PAGR_g4165 mannitol-1-phosphate 5-dehydrogenase MtlD K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D PAGR_g3364 sorbitol-6-phosphate dehydrogenase SrlD K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D PAGR_g1471 1-phosphofructokinase FruK K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D PAGR_g2235 xylose isomerase XylA K01805 xylA; xylose isomerase [EC:5.3.1.5] D PAGR_g0051 xylose isomerase XylA K01805 xylA; xylose isomerase [EC:5.3.1.5] D PAGR_g1370 D-arabinitol 4-dehydrogenase DalD K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11] D PAGR_g0714 fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0715 ketose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0612 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g1648 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0879 fructose-bisphosphate aldolase class II FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g2244 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0167 triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PAGR_g1232 D-allose kinase AlsK K00881 alsK; allose kinase [EC:2.7.1.55] D PAGR_g1233 D-allulose-6-phosphate 3-epimerase AlsE K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-] D PAGR_g1697 Multiphosphoryl transfer protein FryA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D PAGR_g0610 heat-responsive suppressor HrsA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D PAGR_g0718 fructose-like phosphotransferase enzyme IIA component FrvA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D PAGR_g1698 fructose-like phosphotransferase enzyme IIB component 2 FrwB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D PAGR_g0717 fructose-like phosphotransferase enzyme IIB component 2 FrwB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D PAGR_g1699 PTS system fructose-specific EIIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g0716 PTS system fructose-specific EIIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g1472 PTS system fructose-specific EIIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g0611 PTS system fructose-specific EIIBBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g1950 PTS system mannose-specific EIIAB component ManX K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D PAGR_g1949 mannose permease IIC component ManY K02795 manY; mannose PTS system EIIC component D PAGR_g1948 mannose permease IID component ManZ K02796 manZ; mannose PTS system EIID component D PAGR_g4164 PTS system mannitol-specific EIICBA component MtlA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D PAGR_g1388 HAD superfamily hydrolase YfbT K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D PAGR_g2418 phosphoglycolate phosphatase YniC K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68] D PAGR_g3363 glucitol/sorbitol-specific phosphotransferase IIA component SrlB K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D PAGR_g3362 glucitol/sorbitol-specific phosphotransferase IIB component SrlE K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D PAGR_g3361 glucitol/sorbitol permease IIC component SrlA K02783 srlA; glucitol/sorbitol PTS system EIIC component C 00052 Galactose metabolism [PATH:paq00052] D PAGR_g2958 galactose-1-epimerase GalM K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D PAGR_g0539 aldose-1-epimerase YihR K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D PAGR_g2957 galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6] D PAGR_g2956 galactose-1-phosphate uridylyltransferase GalT K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D PAGR_g1536 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PAGR_g0139 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PAGR_g1535 UTP--glucose-1-phosphate uridylyltransferase GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAGR_g1999 UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAGR_g3003 phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAGR_g1281 glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2] D PAGR_g3945 beta-galactosidase LacZ K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PAGR_g0850 alpha-galactosidase MelA K07406 melA; alpha-galactosidase [EC:3.2.1.22] D PAGR_g0164 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g2247 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g3941 sucrose-6-phosphate hydrolase ScrB K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D PAGR_g0771 alpha-glucosidase 2 YicI K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:paq00053] D PAGR_g2000 UDP-glucose 6-dehydrogenase Udg K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PAGR_g2524 beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D PAGR_g3912 gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D PAGR_g1085 gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D PAGR_g2001 DTDP-glucose 4 6-dehydratase RfbB K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D PAGR_g0234 L-threonine 3-dehydrogenase YjjN K23007 lgoD; L-galactonate 5-dehydrogenase [EC:1.1.1.414] D PAGR_g0857 putative phosphotransferase IIA component SgcA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PAGR_g2242 PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PAGR_g0856 PEP-dependent phosphotransferase system subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D PAGR_g2246 sugar phosphotransferase component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D PAGR_g0855 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component D PAGR_g2245 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component D PAGR_g3917 hexulose-6-phosphate synthase SgbH K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D PAGR_g3918 hexulose-6-phosphate isomerase SgbU K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D PAGR_g2050 L-ribulose-5-phosphate 4-epimerase AraD K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D PAGR_g3919 L-ribulose-5-phosphate 4-epimerase SgbE K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D PAGR_g3913 3-dehydro-L-gulonate 2-dehydrogenase DlgD K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130] D PAGR_g3916 cryptic L-xylulose kinase Lyx K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g0951 D-glucarate dehydratase GudD K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D PAGR_g0952 2-dehydro-3-deoxyglucarate aldolase GarL K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20] D PAGR_g0948 D-galactarate dehydratase GarD K01708 garD; galactarate dehydratase [EC:4.2.1.42] D PAGR_g2896 mandelate racemase MdlA K20023 talrD-galrD; L-talarate/galactarate dehydratase [EC:4.2.1.156 4.2.1.42] C 00500 Starch and sucrose metabolism [PATH:paq00500] D PAGR_g3942 PTS system sucrose-specific EIIBC component ScrA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D PAGR_g3941 sucrose-6-phosphate hydrolase ScrB K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D PAGR_g0771 alpha-glucosidase 2 YicI K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D PAGR_g1535 UTP--glucose-1-phosphate uridylyltransferase GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAGR_g1999 UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAGR_g2911 periplasmic beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PAGR_g4148 cellulose synthase catalytic subunit BcsA K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D PAGR_g3274 Pts system, cellobiose-specific IIa component ChbA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAGR_g2528 PTS system, lactose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAGR_g0029 N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component ChbA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAGR_g3276 cellobiose-specific phosphotransferase enzyme IIB component CelA K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAGR_g2527 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAGR_g0026 cellobiose-specific phosphotransferase enzyme IIB component CelA K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAGR_g3275 Lichenan permease IIC component LicC K02761 celB; cellobiose PTS system EIIC component D PAGR_g2526 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D PAGR_g0027 cellobiose permease IIC component CelB K02761 celB; cellobiose PTS system EIIC component D PAGR_g3273 beta-glucosidase YckE K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAGR_g0028 beta-glucosidase A BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAGR_p034 6-phospho-beta-glucosidase AscB K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAGR_g0897 6-phospho-beta-glucosidase BglA K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAGR_g2577 beta-glucosidase BglB K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D PAGR_g0335 glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D PAGR_g0336 glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D PAGR_g0333 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D PAGR_g0337 glycogen phosphorylase GlgP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D PAGR_g0342 maltodextrin phosphorylase MalP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D PAGR_g2189 maltodextrin phosphorylase MalP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D PAGR_g0334 glycogen debranching enzyme GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D PAGR_g1755 cytoplasmic alpha-amylase AmyA K01176 AMY; alpha-amylase [EC:3.2.1.1] D PAGR_p107 glucoamylase Cga K01178 SGA1; glucoamylase [EC:3.2.1.3] D PAGR_g2190 4-alpha-glucanotransferase MalQ K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D PAGR_g0343 4-alpha-glucanotransferase MalQ K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D PAGR_g1259 glucose-specific phosphotransferase enzyme IIA component Crr K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PAGR_g2057 PTS system maltose- and glucose-specific EIICB component MalX K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D PAGR_g1916 PTS system alpha-glucoside-specific EIICB component AglA K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D PAGR_g1917 6-phospho-alpha-glucosidase AglB K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D PAGR_g2359 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D PAGR_g2358 maltooligosyl trehalose synthase TreY K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D PAGR_g2357 malto-oligosyltrehalose trehalohydrolase TreZ K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D PAGR_g1861 trehalose-6-phosphate synthase OtsA K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D PAGR_g1860 trehalose-phosphatase OtsB K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D PAGR_g0830 Alpha,alpha-trehalase TreF K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D PAGR_g2590 periplasmic trehalase TreA K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D PAGR_g3003 phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAGR_g1281 glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2] D PAGR_g4029 glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAGR_g3256 manno(fructo)kinase Mak K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PAGR_g3946 fructokinase ScrK K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:paq00520] D PAGR_g2649 beta-hexosaminidase NagZ K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PAGR_g3703 beta-hexosaminidase NahA K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PAGR_g1259 glucose-specific phosphotransferase enzyme IIA component Crr K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PAGR_g3011 PTS system N-acetylglucosamine-specific EIICBA component NagE K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PAGR_g3013 N-acetylglucosamine-6-phosphate deacetylase NagA K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D PAGR_g3012 glucosamine-6-phosphate deaminase NagB K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D PAGR_g3959 putative N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8] D PAGR_g3256 manno(fructo)kinase Mak K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PAGR_g3946 fructokinase ScrK K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PAGR_g0060 glucosamine--fructose-6-phosphate aminotransferase GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PAGR_g3725 phosphoglucosamine mutase GlmM K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D PAGR_g0061 bifunctional GlmU protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PAGR_g3980 PTS system sucrose-specific EIIBC component ScrA K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D PAGR_g3981 N-acetylmuramic acid 6-phosphate etherase YfeU K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D PAGR_g2364 molecular chaperone YdhH K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D PAGR_g3739 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PAGR_g4072 UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PAGR_g4127 UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PAGR_g4126 UDP-N-acetyl-D-mannosamine dehydrogenase WecC K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D PAGR_g1435 alpha-N-arabinofuranosidase AbfA K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D PAGR_p093 bifunctional polymyxin resistance protein ArnA K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D PAGR_p091 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D PAGR_p092 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase ArnC K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D PAGR_p094 polysaccharide deacetylase family protein YfbH K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D PAGR_g2655 PTS system glucose-specific EIICB component PtsG K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D PAGR_g2057 PTS system maltose- and glucose-specific EIICB component MalX K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D PAGR_g0741 PTS system glucose-specific EIICBA component PtsG K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D PAGR_g1281 glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2] D PAGR_p104 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D PAGR_g3003 phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAGR_g1535 UTP--glucose-1-phosphate uridylyltransferase GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAGR_g1999 UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAGR_g2000 UDP-glucose 6-dehydrogenase Udg K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PAGR_g2957 galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6] D PAGR_g2956 galactose-1-phosphate uridylyltransferase GalT K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D PAGR_g1536 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PAGR_g0139 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PAGR_g2001 DTDP-glucose 4 6-dehydratase RfbB K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D PAGR_g1950 PTS system mannose-specific EIIAB component ManX K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D PAGR_g1949 mannose permease IIC component ManY K02795 manY; mannose PTS system EIIC component D PAGR_g1948 mannose permease IID component ManZ K02796 manZ; mannose PTS system EIID component D PAGR_g4029 glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAGR_g2278 mannose-6-phosphate isomerase ManA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PAGR_g0335 glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:paq00620] D PAGR_g3983 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAGR_g3455 pyruvate dehydrogenase E1 component AceE K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PAGR_g3454 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase AceF K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PAGR_g3453 dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAGR_g2800 formate acetyltransferase 1 PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D PAGR_g2004 aldehyde-alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAGR_g3221 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PAGR_g1027 alcohol dehydrogenase YphC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PAGR_g1482 putative alcohol dehydrogenase class III AdhC K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAGR_p231 cinnamyl alcohol dehydrogenase 2 YjgB K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D PAGR_g4005 zinc-type alcohol dehydrogenase-like protein YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAGR_g1035 zinc-type alcohol dehydrogenase-like protein YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAGR_g3972 alcohol dehydrogenase cytochrome c subunit AdhB K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D PAGR_g1385 acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] D PAGR_g1384 phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PAGR_g1902 pyruvate kinase II PykA K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAGR_g2386 pyruvate kinase I PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAGR_g3390 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha AccA K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PAGR_g0462 biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PAGR_g0461 biotin carboxylase AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PAGR_g1359 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta AccD K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PAGR_g2743 acylphosphatase YccX K01512 acyP; acylphosphatase [EC:3.6.1.7] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g2582 aldehyde dehydrogenase AldA K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D PAGR_g3222 aldehyde dehydrogenase AldA K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D PAGR_g3280 L-lactate dehydrogenase LldD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D PAGR_g2818 pyruvate dehydrogenase PoxB K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D PAGR_g2095 D-lactate dehydrogenase LdhA K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D PAGR_g2912 D-lactate dehydrogenase Dld K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D PAGR_g1587 aldehyde dehydrogenase A AldA K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D PAGR_g2376 Lactoylglutathione lyase GloA K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D PAGR_g3372 hydroxyacylglutathione hydrolase GloB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PAGR_g2779 metallo-beta-lactamase family protein YcbL K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PAGR_g2345 putative intracellular protease/amidase HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D PAGR_g1622 putative 2-hydroxyacid dehydrogenase YcdW K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PAGR_g2589 2-hydroxyacid dehydrogenase YcdW K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PAGR_g0013 2-ketogluconate reductase TkrA K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D PAGR_g1492 NAD-dependent malic enzyme SfcA K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PAGR_g1246 NADP-dependent malic enzyme MaeB K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D PAGR_g0485 malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PAGR_p199 malate:quinone oxidoreductase Mqo K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D PAGR_g0226 malate:quinone oxidoreductase Mqo K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D PAGR_p206 fumarate hydratase class I, aerobic FumA K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D PAGR_g2277 fumarate hydratase class II FumC K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PAGR_g0188 phosphoenolpyruvate carboxylase Ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D PAGR_g0354 phosphoenolpyruvate carboxykinase PckA K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PAGR_g2398 phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PAGR_g4042 malate synthase A AceB K01638 aceB; malate synthase [EC:2.3.3.9] D PAGR_g3492 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D PAGR_g2256 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D PAGR_g0792 trans-homoaconitate synthase LeuA2 K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:paq00630] D PAGR_g4041 isocitrate lyase AceA K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D PAGR_g3983 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAGR_g4042 malate synthase A AceB K01638 aceB; malate synthase [EC:2.3.3.9] D PAGR_g0485 malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PAGR_g2989 citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1] D PAGR_g2042 aconitate hydratase 1 AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PAGR_g3450 aconitate hydratase AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D PAGR_g2236 catalase KatA K03781 katE; catalase [EC:1.11.1.6] D PAGR_g2356 catalase KatE K03781 katE; catalase [EC:1.11.1.6] D PAGR_g1622 putative 2-hydroxyacid dehydrogenase YcdW K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PAGR_g2589 2-hydroxyacid dehydrogenase YcdW K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PAGR_g0013 2-ketogluconate reductase TkrA K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D PAGR_p220 D-isomer specific 2-hydroxyacid dehydrogenase YiaE K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D PAGR_g0371 phosphoglycolate phosphatase Gph K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D PAGR_g0100 glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAGR_g1149 serine hydroxymethyltransferase 1 GlyA1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAGR_g0895 glycine dehydrogenase GcvP K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PAGR_g0893 aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAGR_g3453 dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAGR_g0894 glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein D PAGR_g0953 2-hydroxy-3-oxopropionate reductase GarR K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D PAGR_g0954 glycerate kinase 2 GarK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PAGR_g1587 aldehyde dehydrogenase A AldA K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D PAGR_g3951 tartrate dehydrogenase/decarboxylase YeaU K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D PAGR_g1905 KHG/KDPG aldolase Eda K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PAGR_g2580 oxalate decarboxylase OxdD K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2] D PAGR_g1995 formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PAGR_g2888 N-formylglutamate amidohydrolase HutG K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:paq00640] D PAGR_g3983 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAGR_g1385 acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] D PAGR_g1384 phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PAGR_g3453 dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAGR_g2800 formate acetyltransferase 1 PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D PAGR_g0844 zinc-binding alcohol dehydrogenase YhdH K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D PAGR_g4077 fatty oxidation complex alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAGR_g1334 fatty acid oxidation complex alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAGR_g3390 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha AccA K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PAGR_g0462 biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PAGR_g0461 biotin carboxylase AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PAGR_g1359 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta AccD K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PAGR_g1381 4-aminobutyrate aminotransferase PuuE K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PAGR_g1624 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PAGR_g2982 succinyl-CoA synthetase beta chain SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PAGR_g2981 succinyl-CoA synthetase alpha chain SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PAGR_g0292 methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PAGR_g3450 aconitate hydratase AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D PAGR_g2748 methylglyoxal synthase MgsA K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D PAGR_g3299 glycerol dehydrogenase DhaD K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D PAGR_g1884 iron-containing alcohol dehydrogenase GldA K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:paq00650] D PAGR_g4077 fatty oxidation complex alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAGR_g1334 fatty acid oxidation complex alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAGR_g2004 aldehyde-alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAGR_g3951 tartrate dehydrogenase/decarboxylase YeaU K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D PAGR_g2986 succinate dehydrogenase flavoprotein subunit SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PAGR_g2985 succinate dehydrogenase iron-sulfur protein SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PAGR_g2988 succinate dehydrogenase cytochrome b556 subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PAGR_g2987 succinate dehydrogenase hydrophobic membrane anchor protein SdhD K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PAGR_g1381 4-aminobutyrate aminotransferase PuuE K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PAGR_g1624 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PAGR_g0478 succinate-semialdehyde dehydrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_g2739 succinate-semialdehyde dehydrogenase SsdA K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_g1612 succinic semialdehyde dehydrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_p251 aldehyde dehydrogenase-like protein YneI K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D PAGR_g0536 3-hydroxyisobutyrate dehydrogenase YihU K08318 yihU; 4-hydroxybutyrate dehydrogenase / sulfolactaldehyde 3-reductase [EC:1.1.1.61 1.1.1.373] D PAGR_g2800 formate acetyltransferase 1 PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D PAGR_p058 catabolic acetolactate synthase BudB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g3491 acetolactate synthase isozyme III large subunit IlvI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g0204 acetolactate synthase isozyme II large subunit IlvG K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g3490 acetolactate synthase isozyme III small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PAGR_g0205 acetolactate synthase isozyme II small subunit IlvM K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D PAGR_p057 alpha-acetolactate decarboxylase BudA K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D PAGR_p059 acetoin reductase BudC K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D PAGR_g2436 3-oxoacyl-ACP reductase FabG K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D PAGR_g2360 short chain dehydrogenase YxbG K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:paq00660] D PAGR_p058 catabolic acetolactate synthase BudB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g3491 acetolactate synthase isozyme III large subunit IlvI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g0204 acetolactate synthase isozyme II large subunit IlvG K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g3490 acetolactate synthase isozyme III small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PAGR_g0205 acetolactate synthase isozyme II small subunit IlvM K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D PAGR_p057 alpha-acetolactate decarboxylase BudA K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D PAGR_g2982 succinyl-CoA synthetase beta chain SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PAGR_g2981 succinyl-CoA synthetase alpha chain SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PAGR_g0793 3-isopropylmalate dehydratase LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PAGR_g3494 3-isopropylmalate dehydratase large subunit LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PAGR_g0794 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PAGR_g3495 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PAGR_g3493 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:paq00562] D PAGR_g3794 inositol monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAGR_g0259 inositol monophosphatase family protein SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAGR_g1155 inositol monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAGR_g3245 Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAGR_g3246 glucose-1-phosphatase precursor Agp K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D PAGR_g0298 inositol 2-dehydrogenase Idh K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D PAGR_g0815 xylose isomerase domain-containing protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11] D PAGR_g2504 rhizopine catabolism protein MocC K03335 iolE; inosose dehydratase [EC:4.2.1.44] D PAGR_p138 rhizopine catabolism protein MocC K03335 iolE; inosose dehydratase [EC:4.2.1.44] D PAGR_g0297 inosose dehydratase IolE K03335 iolE; inosose dehydratase [EC:4.2.1.44] D PAGR_g0299 malonic semialdehyde oxidative decarboxylase IolD K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D PAGR_g0293 Myo-inositol catabolism protein IolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D PAGR_g0300 myo-inositol catabolism protein IolC K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D PAGR_g0292 methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PAGR_g0167 triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:paq00190] D PAGR_g1392 NADH-quinone oxidoreductase chain A NuoA K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D PAGR_g1393 NADH-quinone oxidoreductase chain B NuoB K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D PAGR_g1394 NADH-quinone oxidoreductase chain C/D NuoC K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D PAGR_g1395 NADH-quinone oxidoreductase chain E NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D PAGR_g1396 NADH-quinone oxidoreductase chain F NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D PAGR_g1397 NADH-quinone oxidoreductase chain G NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D PAGR_g1398 NADH-quinone oxidoreductase chain H NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D PAGR_g1399 NADH-quinone oxidoreductase chain I NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D PAGR_g1400 NADH-quinone oxidoreductase chain J NuoJ K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D PAGR_g1401 NADH-quinone oxidoreductase chain K NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D PAGR_g1402 NADH-quinone oxidoreductase chain L NuoL K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D PAGR_g1403 NADH-quinone oxidoreductase chain M NuoM K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D PAGR_g1404 NADH-quinone oxidoreductase chain N NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D PAGR_g2647 NADH dehydrogenase Ndh K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D PAGR_g2986 succinate dehydrogenase flavoprotein subunit SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PAGR_g2985 succinate dehydrogenase iron-sulfur protein SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PAGR_g2988 succinate dehydrogenase cytochrome b556 subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PAGR_g2987 succinate dehydrogenase hydrophobic membrane anchor protein SdhD K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PAGR_g3219 protoheme IX farnesyltransferase CyoE K02257 COX10; heme o synthase [EC:2.5.1.141] D PAGR_g3218 cytochrome o ubiquinol oxidase subunit IV CyoD K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D PAGR_g3217 cytochrome o ubiquinol oxidase subunit III CyoC K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D PAGR_g3216 cytochrome o ubiquinol oxidase subunit I CyoB K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D PAGR_g3215 cytochrome o ubiquinol oxidase subunit II CyoA K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D PAGR_g0837 cytochrome d ubiquinol oxidase subunit I CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PAGR_g2980 cytochrome d ubiquinol oxidase subunit I CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PAGR_g0838 cytochrome d ubiquinol oxidase subunit II CydB K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PAGR_g2979 cytochrome d ubiquinol oxidase subunit II CydB K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PAGR_g2978 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D PAGR_g0065 ATP synthase alpha chain AtpA K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PAGR_g0063 ATP synthase beta chain AtpD K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PAGR_g0064 ATP synthase gamma chain AtpG K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PAGR_g0066 ATP synthase delta chain AtpH K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PAGR_g0062 ATP synthase epsilon chain AtpC K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PAGR_g0069 ATP synthase a chain AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PAGR_g0067 ATP synthase B chain AtpF K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PAGR_g0068 ATP synthase C chain AtpE K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PAGR_g0525 inorganic pyrophosphatase Ppa K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D PAGR_g0966 inorganic pyrophosphatase Ppa K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D PAGR_g3808 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D PAGR_g1191 polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PAGR_g2922 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:paq00680] D PAGR_g1482 putative alcohol dehydrogenase class III AdhC K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAGR_g1481 S-formylglutathione hydrolase YeiG K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D PAGR_g1149 serine hydroxymethyltransferase 1 GlyA1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAGR_p220 D-isomer specific 2-hydroxyacid dehydrogenase YiaE K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D PAGR_g3810 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAGR_g0960 enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAGR_g0188 phosphoenolpyruvate carboxylase Ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D PAGR_g0485 malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PAGR_g0714 fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0715 ketose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0612 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g1648 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0879 fructose-bisphosphate aldolase class II FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g2244 fructose-bisphosphate aldolase 1 FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PAGR_g0529 fructose-1,6-bisphosphatase Fbp K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAGR_g0171 fructose-1,6-bisphosphatase class II GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D PAGR_g0164 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g2247 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g1385 acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] D PAGR_g1384 phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PAGR_g3983 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAGR_g2398 phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D PAGR_g3811 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g2959 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g3547 phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g2530 Glyoxylate reductase GyaR K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g0886 D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1072 D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1086 D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1099 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g2797 phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PAGR_g3580 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PAGR_g0994 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:paq00910] D PAGR_g2448 nitrate transport protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D PAGR_g2447 nitrate transport permease protein NrtB K15577 nrtB; nitrate/nitrite transport system permease protein D PAGR_g2446 nitrate transport protein NasD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D PAGR_g2444 nitrate reductase NasA K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D PAGR_g2445 nitrite reductase large subunit NasB K00361 nasB; nitrite reductase [NAD(P)H] [EC:1.7.1.4] D PAGR_p055 Glu/Leu/Phe/Val dehydrogenase GdhA K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PAGR_g0100 glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAGR_g3759 glutamate synthase GltA K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PAGR_g0588 carbonic anhydrase 2 Can K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D PAGR_g2845 carbonate dehydratase CynT K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D PAGR_g3437 carbonic anhydrase Can K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:paq00920] D PAGR_g1252 thiosulfate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D PAGR_g0165 sulfate-binding protein precursor Sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D PAGR_g1253 sulfate transport system permease protein CysU K02046 cysU; sulfate/thiosulfate transport system permease protein D PAGR_g1254 sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D PAGR_g1255 sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D PAGR_g0388 taurine-binding periplasmic protein precursor TauA K15551 tauA; taurine transport system substrate-binding protein D PAGR_g0390 taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein D PAGR_g0389 taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D PAGR_g0391 alpha-ketoglutarate-dependent taurine dioxygenase TauD K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D PAGR_g1796 aliphatic sulfonates-binding protein SsuA K15553 ssuA; sulfonate transport system substrate-binding protein D PAGR_g2770 alkanesulfonate transporter substrate-binding subunit SsuA K15553 ssuA; sulfonate transport system substrate-binding protein D PAGR_g2772 aliphatic sulfonate transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D PAGR_g2773 aliphatic sulfonate transport ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D PAGR_g2771 alkanesulfonate monooxygenase SsuD K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D PAGR_g1794 alkanesulfonate monooxygenase 1 SsuD1 K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D PAGR_g2769 FMN reductase SsuE K00299 ssuE; FMN reductase [EC:1.5.1.38] D PAGR_g0983 sulfate adenylyltransferase subunit 1 CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D PAGR_g0982 sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PAGR_g0984 adenylyl-sulfate kinase CysC K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D PAGR_g0517 adenosine-3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PAGR_g0971 phosphoadenosine phosphosulfate reductase CysH K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D PAGR_g3760 flavodoxin/nitric oxide synthase CysJ K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D PAGR_g0969 sulfite reductase flavoprotein alpha-component CysJ K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D PAGR_g0970 sulfite reductase hemoprotein beta-component CysI K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D PAGR_g3934 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D PAGR_g1161 3-mercaptopyruvate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PAGR_g0339 thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D PAGR_g0157 serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PAGR_g1263 cysteine synthase A Cys K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAGR_g3202 cysteine synthase 1 Cys11 K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAGR_g4043 homoserine O-succinyltransferase MetA K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D PAGR_g0184 cystathionine gamma-synthase MetB K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:paq00061] D PAGR_g3390 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha AccA K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PAGR_g0462 biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PAGR_g0461 biotin carboxylase AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PAGR_g1359 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta AccD K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PAGR_g2662 acyl carrier protein AcpP K02078 acpP; acyl carrier protein D PAGR_g2664 malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PAGR_g2665 3-oxoacyl-ACP synthase III FabH K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PAGR_g1345 3-oxoacyl-ACP synthase FabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D PAGR_g2661 3-oxoacyl-ACP synthase II FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAGR_g2663 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAGR_g2176 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAGR_g2757 3-hydroxydecanoyl-ACP dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D PAGR_g3395 (3R)-hydroxymyristoyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PAGR_g2071 enoyl-ACP-reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D PAGR_g1963 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:paq00071] D PAGR_g1333 3-ketoacyl-CoA thiolase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAGR_g4078 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAGR_g4077 fatty oxidation complex alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAGR_g1334 fatty acid oxidation complex alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAGR_g3324 acyl-coenzyme A dehydrogenase FadE K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D PAGR_g1963 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAGR_g3695 bifunctional acyl-ACP synthetase/2-acylclycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D PAGR_g1482 putative alcohol dehydrogenase class III AdhC K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAGR_g2004 aldehyde-alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAGR_g3221 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PAGR_g1027 alcohol dehydrogenase YphC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:paq00561] D PAGR_g0954 glycerate kinase 2 GarK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g4005 zinc-type alcohol dehydrogenase-like protein YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAGR_g1035 zinc-type alcohol dehydrogenase-like protein YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D PAGR_g3298 PTS-dependent dihydroxyacetone kinase, dihydroxyacetone binding subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D PAGR_g3297 PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D PAGR_g3296 PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D PAGR_g3299 glycerol dehydrogenase DhaD K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D PAGR_g1884 iron-containing alcohol dehydrogenase GldA K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D PAGR_g0173 glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PAGR_g2594 glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PAGR_g4021 glycerol-3-phosphate acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D PAGR_g2666 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D PAGR_g0692 acyl-phosphate glycerol 3-phosphate acyltransferase YgiH K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PAGR_g0721 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PAGR_g4020 diacylglycerol kinase DgkA K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D PAGR_g0850 alpha-galactosidase MelA K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:paq00564] D PAGR_g0155 glycerol-3-phosphate dehydrogenase GpsA K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D PAGR_g0338 aerobic glycerol-3-phosphate dehydrogenase GlpD K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D PAGR_g4021 glycerol-3-phosphate acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D PAGR_g0692 acyl-phosphate glycerol 3-phosphate acyltransferase YgiH K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PAGR_g0721 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PAGR_g4020 diacylglycerol kinase DgkA K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D PAGR_g4102 outer membrane phospholipase A PldA K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D PAGR_g4098 lysophospholipase L2 PldB K01048 pldB; lysophospholipase [EC:3.1.1.5] D PAGR_g0254 glycerophosphoryl diester phosphodiesterase UgpQ K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PAGR_g1317 glycerophosphoryl diester phosphodiesterase GlpQ K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PAGR_g0324 glycerophosphoryl diester phosphodiesterase UgpQ K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PAGR_g3695 bifunctional acyl-ACP synthetase/2-acylclycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D PAGR_p210 CDP-diacylglycerol phosphotidylhydrolase Cdh K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D PAGR_g0166 CDP-diacylglycerol pyrophosphatase Cdh K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D PAGR_g3400 phosphatidate cytidylyltransferase CdsA K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D PAGR_g1029 CDP-diacylglycerol--serine O-phosphatidyltransferase PssA K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PAGR_g0487 phosphatidylserine decarboxylase proenzyme Psd K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D PAGR_g2726 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D PAGR_g3232 phosphatidylglycerophosphatase A PgpA K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D PAGR_g2044 phosphatidylglycerophosphatase B PgpB K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D PAGR_g1140 HAD superfamily hydrolase YfhB K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D PAGR_g2013 cardiolipin synthetase Cls K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D PAGR_g2930 putative cardiolipin synthetase YbhO K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D PAGR_g2709 cardiolipin synthase YmdC K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:paq00565] D PAGR_g4102 outer membrane phospholipase A PldA K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:paq00600] D PAGR_g3945 beta-galactosidase LacZ K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PAGR_g0850 alpha-galactosidase MelA K07406 melA; alpha-galactosidase [EC:3.2.1.22] D PAGR_g3703 beta-hexosaminidase NahA K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism D PAGR_g4102 outer membrane phospholipase A PldA K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D PAGR_g4102 outer membrane phospholipase A PldA K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:paq00592] D PAGR_g4102 outer membrane phospholipase A PldA K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D PAGR_g1333 3-ketoacyl-CoA thiolase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAGR_g4078 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:paq01040] D PAGR_g3159 acyl-CoA thioesterase I TesA K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D PAGR_g3196 acyl-CoA thioesterase II TesB K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D PAGR_g2018 acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:paq00230] D PAGR_g0706 ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PAGR_g0359 ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D PAGR_g0781 phosphopentomutase DeoB K01839 deoB; phosphopentomutase [EC:5.4.2.7] D PAGR_g3003 phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAGR_g2469 ribose-phosphate pyrophosphokinase Prs K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PAGR_g1363 amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PAGR_g4049 phosphoribosylamine-glycine ligase PurD K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D PAGR_g1195 phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PAGR_g1906 phosphoribosylglycinamide formyltransferase 2 PurT K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D PAGR_g1143 phosphoribosylformylglycinamidine synthase PurL K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D PAGR_g1196 phosphoribosylaminoimidazole synthetase PurM K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D PAGR_g3156 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D PAGR_g3155 phosphoribosylaminoimidazole carboxylase catalytic subunit PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D PAGR_g1218 phosphoribosylaminoimidazole-succinocarboxamide synthase PurC K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D PAGR_g2633 adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PAGR_g4048 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PAGR_g3179 adenine phosphoribosyltransferase Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PAGR_g3171 UDP-sugar hydrolase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D PAGR_g0990 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAGR_g3015 HAD superfamily hydrolase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D PAGR_g0357 phosphatase YrfG K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D PAGR_g3173 Inosine-guanosine kinase Gsk K00892 gsk; inosine kinase [EC:2.7.1.73] D PAGR_g0782 purine nucleoside phosphorylase DeoD K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D PAGR_g3258 conserved hypothetical protein YaiE K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D PAGR_g0586 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PAGR_g1024 putative ABC transporter permease YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PAGR_g3438 hypoxanthine phosphoribosyltransferase Hpt K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D PAGR_g1178 inosine-5'-monophosphate dehydrogenase GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PAGR_g1164 nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PAGR_g3548 NTPase YjjX K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D PAGR_p050 nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D PAGR_g0860 non-canonical purine NTP pyrophosphatase YggV K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D PAGR_g3313 xanthine phosphoribosyltransferase Gpt K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D PAGR_g2141 xanthine dehydrogenase small subunit XdhA K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D PAGR_g2142 xanthine dehydrogenase molybdopterin binding subunit XhdB K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D PAGR_p019 xanthine dehydrogenase molybdenum binding subunit YagR K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D PAGR_p018 xanthine dehydrogenase FAD binding subunit YagS K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D PAGR_p017 xanthine dehydrogenase iron-sulfur binding subunit YagT K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D PAGR_g2583 glutamine amidotransferase GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PAGR_g1179 GMP synthase large subunit GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PAGR_g3466 GMP reductase GuaC K00364 guaC; GMP reductase [EC:1.7.1.7] D PAGR_g2140 guanine deaminase GuaD K01487 guaD; guanine deaminase [EC:3.5.4.3] D PAGR_g0112 guanylate kinase Gmk K00942 gmk; guanylate kinase [EC:2.7.4.8] D PAGR_g1044 ribonucleoside-diphosphate reductase 2 alpha subunit NrdE K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAGR_g1412 ribonucleoside-diphosphate reductase 1 alpha subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAGR_g1411 ribonucleoside-diphosphate reductase 1 beta subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PAGR_g1043 ribonucleoside-diphosphate reductase 2 beta subunit NrdF K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PAGR_g3704 anaerobic ribonucleoside-triphosphate reductase NrdD K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PAGR_g3414 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D PAGR_g1389 metal dependent phosphohydrolase YfbR K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D PAGR_g1809 metal dependent phosphohydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D PAGR_g0110 GTP pyrophosphokinase SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PAGR_g4133 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GppA K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D PAGR_g1190 exopolyphosphatase Ppx K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D PAGR_g0957 GTP pyrophosphokinase RelA K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D PAGR_g4115 adenylate cyclase CyaA K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D PAGR_g0501 adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PAGR_g2280 adenosine deaminase Add K01488 add; adenosine deaminase [EC:3.5.4.4] D PAGR_g1653 AMP nucleosidase Amn K01241 amn; AMP nucleosidase [EC:3.2.2.4] D PAGR_g0942 decarboxylase family protein YgdH K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D PAGR_g0516 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor CpdB K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D PAGR_g3174 adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] D PAGR_g0958 nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PAGR_g0708 Calcineurin phosphoesterase domain-containing protein Icc K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D PAGR_g1207 metallophosphoesterase Icc K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D PAGR_g3517 diadenosine tetraphosphatase ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D PAGR_g0984 adenylyl-sulfate kinase CysC K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D PAGR_g0983 sulfate adenylyltransferase subunit 1 CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D PAGR_g0982 sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PAGR_g2145 FAD dependent oxidoreductase Aba2 K16839 hpxO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D PAGR_g2338 transthyretin-like protein YedX K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D PAGR_g3333 hydroxyisourate hydrolase YedX K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D PAGR_g3334 OHCU decarboxylase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D PAGR_g3358 hydantoin racemase HyuE K16841 hpxA; allantoin racemase [EC:5.1.99.3] D PAGR_g3357 polysaccharide deacetylase K16842 hpxB; allantoinase [EC:3.5.2.5] D PAGR_g3335 N-carbamoyl-L-amino acid hydrolase AmaB K02083 allC; allantoate deiminase [EC:3.5.3.9] D PAGR_g3336 class V aminotransferase PucG K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D PAGR_g3344 putative amidase GatA K22601 hpxY; oxamate carbamoyltransferase [EC:2.1.3.5] D PAGR_g3342 gamma-glutamyltranspeptidase precursor Ggt K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:paq00240] D PAGR_g3523 carbamoyl-phosphate synthase large chain CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PAGR_g3524 carbamoyl-phosphate synthase small chain CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PAGR_g3689 aspartate carbamoyltransferase catalytic chain PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PAGR_g3690 aspartate carbamoyltransferase regulatory chain PyrI K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PAGR_g0549 dihydroorotase hypothetical protein K01465 URA4; dihydroorotase [EC:3.5.2.3] D PAGR_g2692 dihydroorotase PyrC K01465 URA4; dihydroorotase [EC:3.5.2.3] D PAGR_g1075 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D PAGR_g2766 dihydroorotate dehydrogenase PyrD K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D PAGR_g0124 orotate phosphoribosyltransferase PyrE K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D PAGR_g2047 orotidine 5'-phosphate decarboxylase PyrF K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D PAGR_g3404 uridylate kinase PyrH K09903 pyrH; uridylate kinase [EC:2.7.4.22] D PAGR_g1164 nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PAGR_g0958 nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PAGR_g0470 Maf-like protein YhdE K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D PAGR_g0582 metal-dependent hydrolase YgjP K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D PAGR_g0959 CTP synthase PyrG K01937 pyrG; CTP synthase [EC:6.3.4.2] D PAGR_g2795 cytidylate kinase Cmk K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D PAGR_g1519 uridine kinase Udk K00876 udk; uridine kinase [EC:2.7.1.48] D PAGR_g3171 UDP-sugar hydrolase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D PAGR_g0990 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAGR_g3015 HAD superfamily hydrolase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D PAGR_g3582 5'-nucleotidase YjjG K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D PAGR_g4090 uridine phosphorylase Udp K00757 udp; uridine phosphorylase [EC:2.4.2.3] D PAGR_g3258 conserved hypothetical protein YaiE K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D PAGR_g1197 uracil phosphoribosyltransferase Upp K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D PAGR_g0516 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor CpdB K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D PAGR_g0942 decarboxylase family protein YgdH K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D PAGR_g1493 cytidine deaminase Cdd K01489 cdd; cytidine deaminase [EC:3.5.4.5] D PAGR_g0373 cytosine deaminase CodA K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D PAGR_g3704 anaerobic ribonucleoside-triphosphate reductase NrdD K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PAGR_g1520 deoxycytidine triphosphate deaminase Dcd K01494 dcd; dCTP deaminase [EC:3.5.4.13] D PAGR_g1044 ribonucleoside-diphosphate reductase 2 alpha subunit NrdE K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAGR_g1412 ribonucleoside-diphosphate reductase 1 alpha subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAGR_g1411 ribonucleoside-diphosphate reductase 1 beta subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PAGR_g1043 ribonucleoside-diphosphate reductase 2 beta subunit NrdF K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PAGR_g1389 metal dependent phosphohydrolase YfbR K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D PAGR_g1809 metal dependent phosphohydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D PAGR_g2658 thymidylate kinase Tmk K00943 tmk; dTMP kinase [EC:2.7.4.9] D PAGR_g0126 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PAGR_g0780 thymidine phosphorylase DeoA K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D PAGR_g2003 thymidine kinase Tdk K00857 tdk; thymidine kinase [EC:2.7.1.21] D PAGR_g0921 thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45] D PAGR_p120 pyrimidine monooxygenase RutA K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46] D PAGR_g0800 4-hydroxyphenylacetate 3-monooxygenase,reductase component HpaC K09024 rutF; flavin reductase [EC:1.5.1.-] D PAGR_p125 pyrimidine utilization flavin reductase protein F YcdH K09024 rutF; flavin reductase [EC:1.5.1.-] D PAGR_p121 isochorismatase family protein YcdL K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110] D PAGR_p122 pyrimidine utilization protein C YcdK K09021 rutC; aminoacrylate peracid reductase D PAGR_p123 pyrimidine utilization protein D YcdJ K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-] D PAGR_g2139 NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D PAGR_g4181 nitroreductase YcdI K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] D PAGR_p124 nitroreductase YcdI K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:paq00250] D PAGR_g2778 aspartate aminotransferase AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAGR_g1124 L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PAGR_g1989 L-asparaginase I AnsA K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PAGR_g2863 putative L-asparaginase precursor YbiK K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PAGR_g1543 asparagine synthase WbpS K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAGR_g3822 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAGR_g3016 asparagine synthetase B AsnB K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAGR_g3331 hydrolase carbon-nitrogen family YafV K13566 NIT2; omega-amidase [EC:3.5.1.3] D PAGR_g1390 putative aminotransferase YfbQ K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PAGR_g3779 aspartate ammonia-lyase AspA K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D PAGR_g0192 argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAGR_g0193 argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PAGR_g0501 adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PAGR_g2633 adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PAGR_g3689 aspartate carbamoyltransferase catalytic chain PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PAGR_g3690 aspartate carbamoyltransferase regulatory chain PyrI K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PAGR_g1381 4-aminobutyrate aminotransferase PuuE K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PAGR_g1624 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PAGR_g0478 succinate-semialdehyde dehydrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_g2739 succinate-semialdehyde dehydrogenase SsdA K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_g1612 succinic semialdehyde dehydrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_p251 aldehyde dehydrogenase-like protein YneI K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D PAGR_g3759 glutamate synthase GltA K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PAGR_p055 Glu/Leu/Phe/Val dehydrogenase GdhA K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PAGR_g1784 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PAGR_g0100 glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAGR_g3523 carbamoyl-phosphate synthase large chain CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PAGR_g3524 carbamoyl-phosphate synthase small chain CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PAGR_p219 glutaminase 1 GlsA1 K01425 glsA; glutaminase [EC:3.5.1.2] D PAGR_g0060 glucosamine--fructose-6-phosphate aminotransferase GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PAGR_g1363 amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:paq00260] D PAGR_g4028 lysine-sensitive aspartokinase III LysC K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAGR_g3542 bifunctional aspartokinase/homoserine dehydrogenase I ThrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PAGR_g0185 bifunctional aspartokinase/homoserine dehydrogenase II MetL K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PAGR_g0332 aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PAGR_g3541 homoserine kinase ThrB K00872 thrB; homoserine kinase [EC:2.7.1.39] D PAGR_g3540 threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1] D PAGR_g2819 low-specificity L-threonine aldolase LtaE K01620 ltaE; threonine aldolase [EC:4.1.2.48] D PAGR_g1149 serine hydroxymethyltransferase 1 GlyA1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAGR_p220 D-isomer specific 2-hydroxyacid dehydrogenase YiaE K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D PAGR_g1622 putative 2-hydroxyacid dehydrogenase YcdW K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PAGR_g2589 2-hydroxyacid dehydrogenase YcdW K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PAGR_g0013 2-ketogluconate reductase TkrA K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D PAGR_g0954 glycerate kinase 2 GarK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PAGR_g3811 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g2959 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g3547 phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g2530 Glyoxylate reductase GyaR K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g0886 D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1072 D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1086 D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1099 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g2797 phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PAGR_g3580 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PAGR_g2139 NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D PAGR_g0148 2-amino-3-ketobutyrate coenzyme A ligase Kbl K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D PAGR_g0149 L-threonine 3-dehydrogenase Tdh K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D PAGR_g0895 glycine dehydrogenase GcvP K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PAGR_g0893 aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAGR_g3453 dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAGR_g0894 glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein D PAGR_g1029 CDP-diacylglycerol--serine O-phosphatidyltransferase PssA K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PAGR_g1927 choline dehydrogenase BetA K00108 betA; choline dehydrogenase [EC:1.1.99.1] D PAGR_g1928 betaine aldehyde dehydrogenase BetB K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D PAGR_g1954 L-serine dehydratase 1 SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D PAGR_g0562 threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PAGR_g3316 pyridoxal-5'-phosphate-dependent protein subunit beta TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PAGR_g0208 threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PAGR_g0932 D-serine dehydratase DsdA K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D PAGR_p163 aspartate racemase YgeA K25316 racX; amino-acid racemase [EC:5.1.1.10] D PAGR_g2024 tryptophan synthase alpha chain TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PAGR_g2025 tryptophan synthase beta chain TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PAGR_p195 diaminobutyrate--2-oxoglutarate aminotransferase Dat K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D PAGR_p196 L-2,4-diaminobutyrate decarboxylase Ddc K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] D PAGR_g3563 L-2,4-diaminobutyrate decarboxylase Ddc K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] C 00270 Cysteine and methionine metabolism [PATH:paq00270] D PAGR_g0157 serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PAGR_g1263 cysteine synthase A Cys K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAGR_g3202 cysteine synthase 1 Cys11 K01738 cysK; cysteine synthase [EC:2.5.1.47] D PAGR_g0727 cystathionine beta-lyase MetC K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAGR_g1880 putative aminotransferase B PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAGR_g1050 homocysteine S-methyltransferase MmuM K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D PAGR_g4034 methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D PAGR_g4092 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PAGR_g2516 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PAGR_g0872 S-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PAGR_g3443 S-adenosylmethionine decarboxylase proenzyme SpeD K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PAGR_g3442 spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16] D PAGR_g2730 autoinducer synthase K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D PAGR_g2152 AHL-synthase EanI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184] D PAGR_g3415 MTA/SAH nucleosidase MtnN K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D PAGR_g3325 methylthioribose kinase MtnK K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D PAGR_g0586 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PAGR_g1024 putative ABC transporter permease YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PAGR_g3326 putative translation initiation factor eIF-2B K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D PAGR_g3329 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D PAGR_g3328 enolase-phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D PAGR_g3327 acireductone dioxygenase ARD K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D PAGR_g4008 aromatic-amino-acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PAGR_g3439 methionine gamma-lyase MdeA K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D PAGR_g1936 putative GAF sensor protein YebR K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D PAGR_g1801 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAGR_g1721 modification methylase EcoRII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAGR_g1008 S-ribosylhomocysteine lyase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D PAGR_g4028 lysine-sensitive aspartokinase III LysC K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAGR_g3542 bifunctional aspartokinase/homoserine dehydrogenase I ThrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PAGR_g0185 bifunctional aspartokinase/homoserine dehydrogenase II MetL K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PAGR_g0332 aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PAGR_g4043 homoserine O-succinyltransferase MetA K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D PAGR_g0184 cystathionine gamma-synthase MetB K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PAGR_g0206 branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAGR_g1007 glutamate-cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D PAGR_g0866 glutathione synthetase GshB K01920 gshB; glutathione synthase [EC:6.3.2.3] D PAGR_g2778 aspartate aminotransferase AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAGR_g1161 3-mercaptopyruvate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PAGR_p163 aspartate racemase YgeA K25316 racX; amino-acid racemase [EC:5.1.1.10] D PAGR_g1776 D-cysteine desulfhydrase DcyD K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D PAGR_g0485 malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PAGR_g1954 L-serine dehydratase 1 SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D PAGR_g1256 cysteine synthase B CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D PAGR_g2530 Glyoxylate reductase GyaR K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g0886 D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1072 D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1086 D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1099 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g2797 phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:paq00280] D PAGR_g0206 branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAGR_g3453 dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAGR_g4077 fatty oxidation complex alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAGR_g1334 fatty acid oxidation complex alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAGR_g1333 3-ketoacyl-CoA thiolase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAGR_g4078 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAGR_g2258 3-hydroxyisobutyrate dehydrogenase YfjR K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D PAGR_g0292 methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1624 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:paq00290] D PAGR_g0562 threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PAGR_g3316 pyridoxal-5'-phosphate-dependent protein subunit beta TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PAGR_g0208 threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PAGR_g0793 3-isopropylmalate dehydratase LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PAGR_g3494 3-isopropylmalate dehydratase large subunit LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PAGR_g0794 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PAGR_g3495 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PAGR_g3493 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D PAGR_p058 catabolic acetolactate synthase BudB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g3491 acetolactate synthase isozyme III large subunit IlvI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g0204 acetolactate synthase isozyme II large subunit IlvG K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g3490 acetolactate synthase isozyme III small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PAGR_g0205 acetolactate synthase isozyme II small subunit IlvM K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D PAGR_g0210 ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PAGR_g0207 dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PAGR_g0206 branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAGR_g0012 valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D PAGR_g1390 putative aminotransferase YfbQ K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PAGR_g3492 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D PAGR_g2256 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:paq00300] D PAGR_g4028 lysine-sensitive aspartokinase III LysC K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAGR_g3542 bifunctional aspartokinase/homoserine dehydrogenase I ThrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PAGR_g0185 bifunctional aspartokinase/homoserine dehydrogenase II MetL K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PAGR_g0332 aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PAGR_g1468 dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAGR_p070 dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAGR_g2558 dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAGR_g1216 dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAGR_g3627 dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAGR_g3525 dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D PAGR_g3409 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase DapD K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D PAGR_g0379 acetylornithine/succinyldiaminopimelate aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PAGR_g1223 succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PAGR_g3677 acetylornithine deacetylase ArgE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PAGR_g4113 diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PAGR_g0913 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PAGR_g3484 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PAGR_g3483 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:paq00310] D PAGR_g2983 2-oxoglutarate dehydrogenase E2 component SucB K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAGR_g3453 dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAGR_g4077 fatty oxidation complex alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAGR_g1334 fatty acid oxidation complex alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAGR_g2297 phosphotransferase K18201 AGPHD1; hydroxylysine kinase [EC:2.7.1.81] D PAGR_p163 aspartate racemase YgeA K25316 racX; amino-acid racemase [EC:5.1.1.10] D PAGR_g3389 lysine decarboxylase LdcC K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18] D PAGR_g1624 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PAGR_g0478 succinate-semialdehyde dehydrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_g2739 succinate-semialdehyde dehydrogenase SsdA K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_g1612 succinic semialdehyde dehydrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_g2116 putative metalloenzyme YdcJ K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D PAGR_g2396 FAD linked oxidase YdiJ K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:paq00220] D PAGR_g3688 ornithine carbamoyltransferase ArgI K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D PAGR_g0192 argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAGR_g0193 argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PAGR_p152 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D PAGR_g3552 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D PAGR_g3551 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D PAGR_p219 glutaminase 1 GlsA1 K01425 glsA; glutaminase [EC:3.5.1.2] D PAGR_g0100 glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAGR_g3523 carbamoyl-phosphate synthase large chain CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PAGR_g3524 carbamoyl-phosphate synthase small chain CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PAGR_p055 Glu/Leu/Phe/Val dehydrogenase GdhA K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PAGR_g2778 aspartate aminotransferase AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAGR_g1390 putative aminotransferase YfbQ K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PAGR_g0930 amino-acid N-acetyltransferase ArgA K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D PAGR_g0191 acetylglutamate kinase ArgB K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D PAGR_g0190 N-acetyl-gamma-glutamyl-phosphate reductase ArgC K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D PAGR_g0379 acetylornithine/succinyldiaminopimelate aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PAGR_g3348 acetylornithine deacetylase ArgE K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] D PAGR_g0189 acetylornithine deacetylase ArgE K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:paq00330] D PAGR_g0373 cytosine deaminase CodA K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D PAGR_g0873 biosynthetic arginine decarboxylase SpeA K01585 speA; arginine decarboxylase [EC:4.1.1.19] D PAGR_g0874 agmatinase SpeB K01480 speB; agmatinase [EC:3.5.3.11] D PAGR_g0845 ornithine decarboxylase SpeC K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D PAGR_g3442 spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16] D PAGR_g3443 S-adenosylmethionine decarboxylase proenzyme SpeD K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1052 spermidine N1-acetyltransferase SpeG K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D PAGR_g2432 arginine N-succinyltransferase AstA K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D PAGR_g2430 succinylarginine dihydrolase AstB K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D PAGR_g2433 succinylornithine transaminase ArgM K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D PAGR_g2431 succinylglutamic semialdehyde dehydrogenase AstD K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D PAGR_g2429 succinylglutamate desuccinylase AstE K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D PAGR_g1567 gamma-glutamylputrescine synthetase PuuA K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11] D PAGR_g1564 gamma-glutamylputrescine oxidoreductase PuuB K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D PAGR_g1566 gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D PAGR_g3263 pyrroline-5-carboxylate reductase ProC K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D PAGR_g1784 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PAGR_g3309 glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PAGR_g3308 gamma-glutamyl phosphate reductase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D PAGR_g2778 aspartate aminotransferase AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:paq00340] D PAGR_g1562 ATP phosphoribosyltransferase HisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D PAGR_g1555 phosphoribosyl-ATP diphosphatase HisI K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D PAGR_g1557 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D PAGR_g1558 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D PAGR_g1556 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D PAGR_g1559 imidazole glycerol-phosphate dehydratase/histidinol phosphatase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D PAGR_g1560 histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAGR_g1561 histidinol dehydrogenase HisD K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D PAGR_g2883 histidine ammonia-lyase HutH K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D PAGR_g2893 histidine ammonia-lyase HutH K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D PAGR_g2894 urocanate hydratase HutU K01712 hutU; urocanate hydratase [EC:4.2.1.49] D PAGR_g2889 imidazolonepropionase HutI K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D PAGR_g2890 atrazine chlorohydrolase HutF K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D PAGR_g2888 N-formylglutamate amidohydrolase HutG K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:paq00350] D PAGR_g2778 aspartate aminotransferase AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAGR_g1560 histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAGR_g4008 aromatic-amino-acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PAGR_g1482 putative alcohol dehydrogenase class III AdhC K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAGR_g2004 aldehyde-alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAGR_g3221 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PAGR_g1027 alcohol dehydrogenase YphC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PAGR_g0478 succinate-semialdehyde dehydrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_g2739 succinate-semialdehyde dehydrogenase SsdA K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_g1612 succinic semialdehyde dehydrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_p073 tyrosine phenol-lyase Tpl K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2] C 00360 Phenylalanine metabolism [PATH:paq00360] D PAGR_g2778 aspartate aminotransferase AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAGR_g1560 histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAGR_g4008 aromatic-amino-acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PAGR_g0240 acetyltransferase YhhY K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D PAGR_g0326 acetyltransferase GNAT family YhhY K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D PAGR_g0271 D-amino acid dehydrogenase small subunit DadA K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D PAGR_g1974 D-amino acid dehydrogenase small subunit DadA K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D PAGR_g3332 peroxidase/catalase HPI KatG K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00380 Tryptophan metabolism [PATH:paq00380] D PAGR_g2983 2-oxoglutarate dehydrogenase E2 component SucB K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAGR_g3453 dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAGR_g4077 fatty oxidation complex alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAGR_g1334 fatty acid oxidation complex alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAGR_g4160 tryptophanase TnaA K01667 tnaA; tryptophanase [EC:4.1.99.1] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1280 Indole-3-pyruvate decarboxylase IpdC K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74] D PAGR_g2236 catalase KatA K03781 katE; catalase [EC:1.11.1.6] D PAGR_g2356 catalase KatE K03781 katE; catalase [EC:1.11.1.6] D PAGR_g3332 peroxidase/catalase HPI KatG K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:paq00400] D PAGR_g2400 phospho-2-dehydro-3-deoxyheptonate aldolase AroH K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAGR_g2960 phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAGR_g1018 phospho-2-dehydro-3-deoxyheptonate aldolase AroF K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAGR_g0367 3-dehydroquinate synthase AroB K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D PAGR_g3499 3-dehydroquinate dehydratase AroD K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D PAGR_g0463 3-dehydroquinate dehydratase AroQ K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D PAGR_g0737 putative 4-hydroxyphenylpyruvate dioxygenase VllY K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D PAGR_g0449 shikimate 5-dehydrogenase AroE K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D PAGR_g1174 quinate/shikimate dehydrogenase QumA K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8] D PAGR_g3260 shikimater kinase II AroL K00891 aroK; shikimate kinase [EC:2.7.1.71] D PAGR_g0366 shikimater kinase I AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D PAGR_g2796 3-phosphoshikimater 1-carboxyvinyltransferase AroA K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D PAGR_g1339 chorismate synthase AroC K01736 aroC; chorismate synthase [EC:4.2.3.5] D PAGR_g2029 anthranilate synthase component I TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PAGR_g2028 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PAGR_g2027 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D PAGR_g2026 tryptophan biosynthesis protein trpCF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D PAGR_g2024 tryptophan synthase alpha chain TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PAGR_g2025 tryptophan synthase beta chain TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PAGR_g1019 chorismate mutase TyrA K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D PAGR_p099 monofunctional chorismate mutase AroQ K04093 pheA1; chorismate mutase [EC:5.4.99.5] D PAGR_g1020 chorismate mutase PheA K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D PAGR_g0713 cyclohexadienyl dehydratase PheC K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91] D PAGR_g2778 aspartate aminotransferase AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAGR_g1560 histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAGR_g4008 aromatic-amino-acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:paq00410] D PAGR_g3434 aspartate 1-decarboxylase PanD K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D PAGR_g1381 4-aminobutyrate aminotransferase PuuE K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PAGR_g1624 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g3433 pantoate-beta-alanine ligase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D PAGR_g4077 fatty oxidation complex alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAGR_g1334 fatty acid oxidation complex alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAGR_g0292 methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:paq00430] D PAGR_g0325 gamma-glutamyltranspeptidase precursor Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAGR_g0391 alpha-ketoglutarate-dependent taurine dioxygenase TauD K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D PAGR_g1384 phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D PAGR_g1385 acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:paq00440] D PAGR_g0790 phosphoenolpyruvate phosphomutase PepM K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D PAGR_g3818 phosphoenolpyruvate mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D PAGR_g3819 phosphoenolpyruvatedecarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] D PAGR_g1632 phosphonate C-P lyase system protein PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D PAGR_g1630 phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D PAGR_g1631 phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D PAGR_g1635 phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D PAGR_g1636 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D PAGR_g1633 phosphonate C-P lyase system protein PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D PAGR_g1638 phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:paq00450] D PAGR_g0184 cystathionine gamma-synthase MetB K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D PAGR_g0727 cystathionine beta-lyase MetC K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAGR_g1880 putative aminotransferase B PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAGR_g4034 methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D PAGR_g4092 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PAGR_g2516 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D PAGR_g3439 methionine gamma-lyase MdeA K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D PAGR_g2390 cysteine desulfurase SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D PAGR_g2808 thioredoxin reductase TrxB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PAGR_g0983 sulfate adenylyltransferase subunit 1 CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D PAGR_g0982 sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PAGR_g0550 pyridoxal phosphate-dependent SelA K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D PAGR_g1496 methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:paq00460] D PAGR_g2911 periplasmic beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PAGR_g0325 gamma-glutamyltranspeptidase precursor Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAGR_g1989 L-asparaginase I AnsA K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PAGR_g2863 putative L-asparaginase precursor YbiK K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PAGR_g1149 serine hydroxymethyltransferase 1 GlyA1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:paq00470] D PAGR_g1975 alanine racemase, catabolic DadB K01775 alr; alanine racemase [EC:5.1.1.1] D PAGR_g0591 D-alanine--D-alanine ligase A DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAGR_g3477 D-alanine--D-alanine ligase B DdlB K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAGR_p163 aspartate racemase YgeA K25316 racX; amino-acid racemase [EC:5.1.1.10] D PAGR_p219 glutaminase 1 GlsA1 K01425 glsA; glutaminase [EC:3.5.1.2] D PAGR_g0200 glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3] D PAGR_g3481 UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PAGR_p127 EBNA-1 nuclear protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312] D PAGR_p128 andelate racemase/muconate lactonizing family protein YcjG K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D PAGR_g2087 chloromuconate cycloisomerase YcjG K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D PAGR_g0932 D-serine dehydratase DsdA K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D PAGR_g1776 D-cysteine desulfhydrase DcyD K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D PAGR_g4113 diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PAGR_g0913 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PAGR_g0271 D-amino acid dehydrogenase small subunit DadA K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D PAGR_g1974 D-amino acid dehydrogenase small subunit DadA K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:paq00480] D PAGR_g0325 gamma-glutamyltranspeptidase precursor Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAGR_g2458 cation transport protein ChaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D PAGR_g2995 LamB/YcsF family protein YbgL K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D PAGR_g2997 allophanate hydrolase subunit 1 YbgJ K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D PAGR_g2996 urea amidolyase-like protein YbgK K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D PAGR_g1007 glutamate-cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D PAGR_g0866 glutathione synthetase GshB K01920 gshB; glutathione synthase [EC:6.3.2.3] D PAGR_g3681 leucyl aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PAGR_g1159 peptidase B PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D PAGR_g2774 aminopeptidase N PepN K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PAGR_g3314 aminoacyl-histidine dipeptidase PepD K01270 pepD; dipeptidase D [EC:3.4.13.-] D PAGR_g2333 glutathione S-transferase Gst K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAGR_g3992 glutathione S-transferase III Gst3 K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAGR_g0224 glutathione S-transferase YliJ K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAGR_g1374 glutathione S-transferase YfcF K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAGR_g0261 glutathione reductase Gor K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D PAGR_g2628 isocitrate dehydrogenase Icd K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PAGR_g1548 6-phosphogluconate dehydrogenase Gnd K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PAGR_p106 6-phosphogluconate dehydrogenase YqeC K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D PAGR_g1904 glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAGR_p105 glucose-6-phosphate 1-dehydrogenase Zwf2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAGR_g2405 vitamin B12 transport periplasmic protein BtuE K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D PAGR_g2514 glutathione peroxidase Gpo K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D PAGR_g0845 ornithine decarboxylase SpeC K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D PAGR_g3442 spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:paq00511] D PAGR_g3945 beta-galactosidase LacZ K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PAGR_g3703 beta-hexosaminidase NahA K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00540 Lipopolysaccharide biosynthesis [PATH:paq00540] D PAGR_g3394 UDP-N-acetylglucosamine acetyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D PAGR_g3473 UDP-3-0-acyl N-acetylglucosamine deacetylase LpxC K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D PAGR_g3396 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D PAGR_g3153 UDP-2,3-diacylglucosamine hydrolase LpxH K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D PAGR_g3393 lipid-A-disaccharide synthase LpxB K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D PAGR_g2790 tetraacyldisaccharide 4'-kinase LpxK K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D PAGR_g3747 arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D PAGR_g2461 2-dehydro-3-deoxyphosphooctonate aldolase KdsA K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D PAGR_g3748 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D PAGR_g2787 3-deoxy-manno-octulosonate cytidylyltransferase KdsB K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D PAGR_g0134 3-deoxy-D-manno-octulosonic-acid transferase KdtA K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D PAGR_g2700 lipid A biosynthesis lauroyl acyltransferase HtrB K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D PAGR_g1900 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase MsbB K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D PAGR_g3301 aspartyl/asparaginyl beta-hydroxylase AspH K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D PAGR_g1462 phosphoesterase PA-phosphatase-like protein YeiU K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D PAGR_g4156 sulfatase YhjW K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D PAGR_g3045 palmitoyl transferase CrcA K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D PAGR_p095 undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase ArnT K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D PAGR_g0116 Lipid A biosynthesis acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D PAGR_g3323 phosphoheptose isomerase GmhA K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D PAGR_g0699 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D PAGR_g3376 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D PAGR_g0147 ADP-L-glycero-D-manno-heptose-6-epimerase HldD K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D PAGR_g0145 lipopolysaccharide heptosyltransferase 1 RfaC K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D PAGR_g0146 ADP-heptose--LPS heptosyltransferase II RfaF K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D PAGR_g0136 lipopolysaccharide core biosynthesis glycosyl transferase RfaQ K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D PAGR_g0138 sugar transferase RfaF K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D PAGR_g0137 putative glycosyl transferase YibD K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D PAGR_g0135 lipopolysaccharide core biosynthesis protein RfaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D PAGR_g0144 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis [PATH:paq00542] D PAGR_g1537 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PAGR_g4129 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:paq00541] D PAGR_g1535 UTP--glucose-1-phosphate uridylyltransferase GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAGR_g1999 UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PAGR_g1536 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PAGR_g0139 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PAGR_g2000 UDP-glucose 6-dehydrogenase Udg K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PAGR_g2001 DTDP-glucose 4 6-dehydratase RfbB K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D PAGR_g1540 glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAGR_g1538 dTDP-glucose 4,6-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PAGR_g1541 dTDP-4-dehydrorhamnose 3,5-epimerase RmlC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PAGR_g1539 dTDP-4-dehydrorhamnose reductase RmlD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D PAGR_g1770 dTDP-4-dehydrorhamnose reductase RfbD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D PAGR_g4124 TDP-4-keto-6-deoxy-D-glucose transaminase RffA K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D PAGR_g4125 TDP-D-fucosamine acetyltransferase RffC K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210] D PAGR_g2278 mannose-6-phosphate isomerase ManA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D PAGR_g0061 bifunctional GlmU protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PAGR_g4127 UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PAGR_g4126 UDP-N-acetyl-D-mannosamine dehydrogenase WecC K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 00550 Peptidoglycan biosynthesis [PATH:paq00550] D PAGR_g3739 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PAGR_g4072 UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PAGR_g3478 UDP-N-acetylmuramate--L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PAGR_g3481 UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PAGR_g3484 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PAGR_g0591 D-alanine--D-alanine ligase A DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAGR_g3477 D-alanine--D-alanine ligase B DdlB K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAGR_g3483 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PAGR_g3401 undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PAGR_g0694 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAGR_g2563 membrane-associated phospholipid phosphatase YbjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAGR_g2841 undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAGR_g3482 phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PAGR_g3479 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PAGR_g3757 monofunctional biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D PAGR_g0360 penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PAGR_g3424 penicillin-binding protein 1B MrcB K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D PAGR_g1163 penicillin-binding protein 1C PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D PAGR_g3034 penicillin-binding protein 2 MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PAGR_g0783 penicillin-binding protein 2 MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PAGR_g3485 peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PAGR_g3700 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PAGR_g1577 beta-lactamase DacD K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAGR_g3037 D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAGR_g2842 beta-lactamase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAGR_g3731 penicillin-binding protein DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:paq00552] D PAGR_g0694 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAGR_g2563 membrane-associated phospholipid phosphatase YbjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAGR_g2841 undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAGR_g1537 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PAGR_g4129 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:paq00543] D PAGR_g1533 amylovoran biosynthesis glycosyl transferase AmsK K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] D PAGR_g1532 amylovoran biosynthesis protein AmsJ K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ D PAGR_g1537 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PAGR_g4129 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PAGR_g4120 UDP-N-acetyl-D-mannosaminuronic acid transferase WecG K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D PAGR_g4122 4-alpha-L-fucosyltransferase WecF K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D PAGR_g0157 serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PAGR_g3921 exopolysaccharide production protein ExoZ K16568 exoZ; exopolysaccharide production protein ExoZ D PAGR_g1523 UDP-galactose-lipid carrier transferase AmsG K16707 amsG; UDP-galactose-lipid carrier transferase D PAGR_g1528 amylovoran biosynthesis glycosyl transferase AmsB K16700 amsB; amylovoran/stewartan biosynthesis glycosyltransferase AmsB/CpsE [EC:2.4.-.-] D PAGR_g1530 amylovoran biosynthesis glycosyl transferase AmsD K25957 cpsG; stewartan biosynthesis glycosyltransferase CpsG D PAGR_g1529 glycosyl transferase WcaA K25958 cpsF; stewartan biosynthesis galactosyltransferase CpsF B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:paq00730] D PAGR_g4057 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D PAGR_g1504 phosphomethylpyrimidine kinase ThiD K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D PAGR_g1158 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAGR_g3227 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PAGR_p242 thiamine biosynthesis oxidoreductase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D PAGR_g3230 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PAGR_p240 thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D PAGR_g1503 hydroxyethylthiazole kinase ThiM K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D PAGR_g4058 thiamine-phosphate pyrophosphorylase ThiE K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D PAGR_g3233 thiamine-monophosphate kinase ThiL K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D PAGR_g0488 ribosome small subunit-dependent GTPase A EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PAGR_g2201 alkaline phosphatase precursor PhoA K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAGR_g2650 thiamine kinase ThiK K07251 thiK; thiamine kinase [EC:2.7.1.89] D PAGR_g3174 adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:paq00740] D PAGR_g2043 GTP cyclohydrolase-2 RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PAGR_g3236 riboflavin biosynthesis protein ribD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PAGR_g3050 Cof-like hydrolase YbjI K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D PAGR_g4110 HAD superfamily hydrolase YigB K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D PAGR_g0701 3,4-dihydroxy-2-butanone 4-phosphate synthase RibB K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D PAGR_p062 6,7-dimethyl-8-ribityllumazine synthase RibH K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D PAGR_g3235 6,7-dimethyl-8-ribityllumazine synthase ribH K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D PAGR_g2384 riboflavin synthase alpha chain ribE K00793 ribE; riboflavin synthase [EC:2.5.1.9] D PAGR_g3530 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D PAGR_g3246 glucose-1-phosphatase precursor Agp K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D PAGR_g4079 NAD(P)H-flavin reductase Fre K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D PAGR_g2769 FMN reductase SsuE K00299 ssuE; FMN reductase [EC:1.5.1.38] D PAGR_p187 nitroreductase YcnD K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39] D PAGR_g1503 hydroxyethylthiazole kinase ThiM K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D PAGR_g0706 ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PAGR_g2630 putative Nudix hydrolase YmfB K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D PAGR_g1364 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PAGR_g2512 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Pad1 K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:paq00750] D PAGR_g2336 pyridoxamine 5'-phosphate oxidase PdxH K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D PAGR_g2334 pyridoxamine kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D PAGR_g0877 D-erythrose-4-phosphate dehydrogenase Epd K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D PAGR_g1355 erythronate-4-phosphate dehydrogenase PdxB K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D PAGR_g2797 phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PAGR_g3514 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D PAGR_g1135 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D PAGR_g3540 threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:paq00760] D PAGR_g1124 L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PAGR_g2966 quinolinate synthetase A NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D PAGR_g3462 nicotinate-nucleotide pyrophosphorylase NadC K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D PAGR_g2775 nicotinate phosphoribosyltransferase PncB K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D PAGR_g0782 purine nucleoside phosphorylase DeoD K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D PAGR_g3578 transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D PAGR_g3171 UDP-sugar hydrolase UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D PAGR_g0990 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PAGR_g3015 HAD superfamily hydrolase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D PAGR_g3031 nicotinate-nucleotide adenylyltransferase NadD K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D PAGR_g0958 nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PAGR_g4055 NADH pyrophosphatase NudC K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D PAGR_g2424 NAD+ synthetase NadE K01916 nadE; NAD+ synthase [EC:6.3.1.5] D PAGR_g1000 competence damage-inducible protein A YgaD K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D PAGR_g1988 pyrazinamidase/nicotinamidase PncA K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D PAGR_g2638 NAD-dependent deacetylase NpdA K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D PAGR_g1119 inorganic polyphosphate/ATP-NAD kinase PpnK K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D PAGR_g0194 soluble pyridine nucleotide transhydrogenase SthA K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D PAGR_g2109 NAD(P) transhydrogenase subunit alpha PntA K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D PAGR_g2110 NAD(P) transhydrogenase subunit beta PntB K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D PAGR_g0478 succinate-semialdehyde dehydrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_g2739 succinate-semialdehyde dehydrogenase SsdA K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_g1612 succinic semialdehyde dehydrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PAGR_p251 aldehyde dehydrogenase-like protein YneI K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] C 00770 Pantothenate and CoA biosynthesis [PATH:paq00770] D PAGR_p058 catabolic acetolactate synthase BudB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g3491 acetolactate synthase isozyme III large subunit IlvI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g0204 acetolactate synthase isozyme II large subunit IlvG K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PAGR_g3490 acetolactate synthase isozyme III small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PAGR_g0205 acetolactate synthase isozyme II small subunit IlvM K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D PAGR_g0210 ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PAGR_g0207 dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PAGR_g3432 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D PAGR_g1581 putative 2-dehydropantoate 2-reductase ApbA K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D PAGR_g3225 2-dehydropantoate 2-reductase PanE K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D PAGR_g3433 pantoate-beta-alanine ligase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D PAGR_g4070 pantothenate kinase CoaA K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D PAGR_g0127 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D PAGR_g0958 nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PAGR_g0131 phosphopantetheine adenylyltransferase CoaD K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D PAGR_g3467 dephospho-CoA kinase CoaE K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D PAGR_g1136 holo-ACP synthase AcpS K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D PAGR_g3624 4'-phosphopantetheinyl transferase AcpT K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D PAGR_g3244 ACP phosphodiesterase YajB K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D PAGR_g0206 branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAGR_g3434 aspartate 1-decarboxylase PanD K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:paq00780] D PAGR_g2943 biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D PAGR_g1345 3-oxoacyl-ACP synthase FabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D PAGR_g2661 3-oxoacyl-ACP synthase II FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAGR_g2663 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAGR_g2176 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAGR_g3395 (3R)-hydroxymyristoyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PAGR_g2071 enoyl-ACP-reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D PAGR_g0346 carboxylesterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D PAGR_g2944 8-amino-7-oxononanoate synthase BioF K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PAGR_g2946 adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D PAGR_g2130 dethiobiotin synthetase 2 YnfK K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D PAGR_g2942 dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D PAGR_g2945 biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D PAGR_g4071 biotin/acetyl-CoA-carboxylase ligase BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PAGR_g3701 biotin sulfoxide reductase BisC K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:paq00785] D PAGR_g3039 lipoyltransferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D PAGR_g3040 lipoyl synthase LipA K03644 lipA; lipoyl synthase [EC:2.8.1.8] D PAGR_p192 lipoate-protein ligase A LplA K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D PAGR_g3453 dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAGR_g3455 pyruvate dehydrogenase E1 component AceE K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PAGR_g3454 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase AceF K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PAGR_g2984 2-oxoglutarate dehydrogenase E1 component SucA K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PAGR_g2983 2-oxoglutarate dehydrogenase E2 component SucB K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PAGR_g0895 glycine dehydrogenase GcvP K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D PAGR_g0893 aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAGR_g0894 glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:paq00790] D PAGR_g1485 GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D PAGR_g2201 alkaline phosphatase precursor PhoA K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAGR_g1891 dATP pyrophosphohydrolase NudB K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D PAGR_g0693 dihydroneopterin aldolase FolB K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D PAGR_g3431 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D PAGR_g3726 dihydropteroate synthase FolP K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D PAGR_g3518 dihydrofolate reductase FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PAGR_g1360 bifunctional folylpolyglutamate synthase/dihydrofolate synthase FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D PAGR_g2043 GTP cyclohydrolase-2 RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PAGR_g0378 para-aminobenzoate synthase glutamine amidotransferase component II PabA K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D PAGR_g1956 para-aminobenzoate synthase component I PabB K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D PAGR_g2660 aminodeoxychorismate lyase PabC K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D PAGR_g0967 6-pyruvoyl tetrahydrobiopterin synthase YgcM K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PAGR_g0965 Radical SAM domain-containing protein YgcF K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PAGR_g3203 Queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PAGR_g0943 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D PAGR_g2938 molybdenum cofactor biosynthesis protein A MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PAGR_g2936 molybdenum cofactor biosynthesis protein C MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PAGR_g2934 molybdopterin-converting factor subunit 2 MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PAGR_g3537 molybdopterin biosynthesis protein Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D PAGR_g2937 molybdenum cofactor biosynthesis protein B MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D PAGR_g2864 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PAGR_p020 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YgfJ K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D PAGR_g0090 molybdopterin-guanine dinucleotide biosynthesis protein A MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:paq00670] D PAGR_g3518 dihydrofolate reductase FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PAGR_g3148 5,10-methylene-tetrahydrofolate dehydrogenase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D PAGR_g1149 serine hydroxymethyltransferase 1 GlyA1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PAGR_g1195 phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PAGR_g4048 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PAGR_g0443 Methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PAGR_g0893 aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PAGR_g4034 methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D PAGR_g0921 thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45] D PAGR_g1995 formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PAGR_g0186 5,10-methylenetetrahydrofolate reductase MetF K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D PAGR_g0887 5-formyltetrahydrofolate cyclo-ligase YgfA K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:paq00860] D PAGR_g1271 glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAGR_g2466 glutamyl-tRNA reductase HemA K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D PAGR_g3419 glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PAGR_g0284 delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PAGR_g4116 porphobilinogen deaminase HemC K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D PAGR_g4117 uroporphyrinogen-III synthase HemD K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D PAGR_g4054 uroporphyrinogen decarboxylase HemE K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D PAGR_g1247 coproporphyrinogen III oxidase HemF K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D PAGR_g0097 oxygen-independent coproporphyrinogen III oxidase HemN K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D PAGR_g4073 protoporphyrinogen oxidase HemG K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D PAGR_g1711 ferrochelatase HemH K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D PAGR_g4118 uroporphyrin-III C-methyltransferase HemX K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D PAGR_g0981 uroporphyrin-III C-methyltransferase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D PAGR_g2443 siroheme synthase CysG K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D PAGR_g3219 protoheme IX farnesyltransferase CyoE K02257 COX10; heme o synthase [EC:2.5.1.141] D PAGR_g2035 Cob(I)yrinic acid a,c-diamide adenosyltransferase BtuR K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PAGR_g2524 beta-D-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D PAGR_g0408 bacterioferritin Bfr K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:paq00130] D PAGR_g4023 chorismate--pyruvate lyase UbiC K03181 ubiC; chorismate lyase [EC:4.1.3.40] D PAGR_g4022 4-hydroxybenzoate octaprenyltransferase UbiA K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PAGR_g4080 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D PAGR_g1364 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PAGR_g2512 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Pad1 K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PAGR_g0892 Ubiquinone biosynthesis hydroxylase VisC K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D PAGR_g1413 3-demethylubiquinone-9 3-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D PAGR_g0891 2-octaprenyl-6-methoxyphenol hydroxylase UbiH K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D PAGR_g4088 ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D PAGR_g3017 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase UbiF K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D PAGR_g3733 thioesterase superfamily protein YbdB K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D PAGR_g3291 ribosyldihydronicotinamide dehydrogenase Nqo2 K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D PAGR_g2737 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D PAGR_g0835 oxidoreductase YtfG K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:paq00900] D PAGR_g3230 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PAGR_g3402 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D PAGR_g0987 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IspD K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D PAGR_g2468 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D PAGR_g0988 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D PAGR_g1168 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D PAGR_g3526 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D PAGR_g1364 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PAGR_g2512 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Pad1 K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PAGR_g2908 isopentenyl-diphosphate delta-isomerase Idi K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D PAGR_g3229 geranyltranstransferase IspA K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D PAGR_p225 geranylgeranyl pyrophosphate synthetase CrtE K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PAGR_g3737 octaprenyl-diphosphate synthase IspB K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D PAGR_g3401 undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:paq00906] D PAGR_p230 phytoene synthase CrtB K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D PAGR_p228 phytoene dehydrogenase CrtI K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D PAGR_p227 lycopene cyclase CrtY K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19] D PAGR_p229 beta-carotene hydroxylase CrtZ K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24] D PAGR_p226 zeaxanthin glucosyl transferase CrtX K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:paq00907] D PAGR_g4077 fatty oxidation complex alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAGR_g1334 fatty acid oxidation complex alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAGR_p231 cinnamyl alcohol dehydrogenase 2 YjgB K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D PAGR_g1333 3-ketoacyl-CoA thiolase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAGR_g4078 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D PAGR_g1244 transketolase 2 TktB K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PAGR_g0876 transketolase 1 TktA K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PAGR_g2595 transketolase subunit B Dxs K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PAGR_g2596 transketolase subunit A TktB K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:paq00523] D PAGR_g1540 glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAGR_g1538 dTDP-glucose 4,6-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PAGR_g1541 dTDP-4-dehydrorhamnose 3,5-epimerase RmlC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PAGR_g1539 dTDP-4-dehydrorhamnose reductase RmlD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D PAGR_g1770 dTDP-4-dehydrorhamnose reductase RfbD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D PAGR_g1538 dTDP-glucose 4,6-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:paq00946] D PAGR_g2911 periplasmic beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D PAGR_g2350 beta-lactamase CTX-M-105 K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:paq00332] D PAGR_g3309 glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PAGR_g3308 gamma-glutamyl phosphate reductase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:paq00261] D PAGR_g0983 sulfate adenylyltransferase subunit 1 CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D PAGR_g0982 sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PAGR_g4028 lysine-sensitive aspartokinase III LysC K00928 lysC; aspartate kinase [EC:2.7.2.4] D PAGR_g3542 bifunctional aspartokinase/homoserine dehydrogenase I ThrA K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D PAGR_g0185 bifunctional aspartokinase/homoserine dehydrogenase II MetL K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D PAGR_g0332 aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PAGR_g1468 dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAGR_p070 dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAGR_g2558 dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAGR_g1216 dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAGR_g3627 dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PAGR_g3525 dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:paq00521] D PAGR_g1281 glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2] D PAGR_g3003 phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PAGR_g3794 inositol monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAGR_g0259 inositol monophosphatase family protein SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAGR_g1155 inositol monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAGR_g3245 Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PAGR_g0298 inositol 2-dehydrogenase Idh K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D PAGR_g1540 glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAGR_g1538 dTDP-glucose 4,6-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PAGR_g1541 dTDP-4-dehydrorhamnose 3,5-epimerase RmlC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PAGR_g1539 dTDP-4-dehydrorhamnose reductase RmlD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D PAGR_g1770 dTDP-4-dehydrorhamnose reductase RfbD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D PAGR_g1281 glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:paq00525] D PAGR_g1540 glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PAGR_g1538 dTDP-glucose 4,6-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:paq00401] D PAGR_g1019 chorismate mutase TyrA K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D PAGR_g2778 aspartate aminotransferase AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAGR_g1560 histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAGR_g4008 aromatic-amino-acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D PAGR_g2029 anthranilate synthase component I TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PAGR_g2028 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D PAGR_g2664 malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PAGR_g2663 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAGR_g2176 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAGR_g2071 enoyl-ACP-reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:paq00998] D PAGR_g2662 acyl carrier protein AcpP K02078 acpP; acyl carrier protein D PAGR_g0790 phosphoenolpyruvate phosphomutase PepM K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D PAGR_g3818 phosphoenolpyruvate mutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9] D PAGR_g3819 phosphoenolpyruvatedecarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82] C 00999 Biosynthesis of various plant secondary metabolites [PATH:paq00999] D PAGR_g0872 S-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PAGR_g0449 shikimate 5-dehydrogenase AroE K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D PAGR_g2911 periplasmic beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites [PATH:paq00997] D PAGR_g3924 L-lysine 6-monooxygenase IucD K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59] D PAGR_g3926 aerobactin siderophore biosynthesis protein IucB K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102] D PAGR_g3927 aerobactin siderophore biosynthesis protein IucA K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38] D PAGR_g3925 aerobactin siderophore biosynthesis protein IucC K03895 iucC; aerobactin synthase [EC:6.3.2.39] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:paq00362] D PAGR_g0733 3-oxoadipate enol-lactonase II CatD K14727 pcaL; 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44] D PAGR_g0729 3-oxoadipate CoA-transferase subunit A PcaI K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D PAGR_g0730 3-oxoadipate CoA-transferase subunit B PcaJ K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D PAGR_g1333 3-ketoacyl-CoA thiolase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAGR_g4078 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAGR_g0731 beta-ketoadipyl CoA thiolase CatF K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D PAGR_g0735 protocatechuate 3,4-dioxygenase alpha chain PcaG K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D PAGR_g0736 protocatechuate 3,4-dioxygenase beta chain PcaH K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D PAGR_g0732 3-carboxy-cis,cis-muconate cycloisomerase PcaB K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D PAGR_g1334 fatty acid oxidation complex alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PAGR_g4077 fatty oxidation complex alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] C 00627 Aminobenzoate degradation [PATH:paq00627] D PAGR_g2743 acylphosphatase YccX K01512 acyP; acylphosphatase [EC:3.6.1.7] D PAGR_g2511 4-hydroxybenzoate decarboxylase VdcC K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61] D PAGR_g2510 4-hydroxybenzoate decarboxylase subunit D KdpD K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61] D PAGR_g1364 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PAGR_g2512 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Pad1 K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:paq00364] D PAGR_g4091 carboxymethylenebutenolidase YsgA K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:paq00625] D PAGR_g3221 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PAGR_g1027 alcohol dehydrogenase YphC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PAGR_g1482 putative alcohol dehydrogenase class III AdhC K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAGR_g2004 aldehyde-alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PAGR_g2167 aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g1613 betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PAGR_g2296 putative dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D PAGR_g1614 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:paq00361] D PAGR_g4091 carboxymethylenebutenolidase YsgA K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D PAGR_g2296 putative dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D PAGR_g1614 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:paq00623] D PAGR_g4091 carboxymethylenebutenolidase YsgA K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:paq00633] D PAGR_g2836 oxygen-insensitive NADPH nitroreductase NfsA K10678 nfsA; nitroreductase [EC:1.-.-.-] D PAGR_g2375 N-ethylmaleimide reductase NemA K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D PAGR_g2571 N-ethylmaleimide reductase NemA K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D PAGR_g1333 3-ketoacyl-CoA thiolase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D PAGR_g4078 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation C 00791 Atrazine degradation [PATH:paq00791] D PAGR_g3551 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D PAGR_g1628 isochorismatase family protein YcdL K23359 biuH; biuret amidohydrolase [EC:3.5.1.84] D PAGR_p152 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D PAGR_g3552 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] C 00930 Caprolactam degradation [PATH:paq00930] D PAGR_g2559 ThiH/PfpI family amidotransferase K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D PAGR_g3912 gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D PAGR_g1085 gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D PAGR_g4077 fatty oxidation complex alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D PAGR_g1334 fatty acid oxidation complex alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:paq00626] D PAGR_g3221 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D PAGR_g1027 alcohol dehydrogenase YphC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D PAGR_g1482 putative alcohol dehydrogenase class III AdhC K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PAGR_g2004 aldehyde-alcohol dehydrogenase AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D PAGR_g0735 protocatechuate 3,4-dioxygenase alpha chain PcaG K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D PAGR_g0736 protocatechuate 3,4-dioxygenase beta chain PcaH K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:paq03020] D PAGR_g4062 DNA-directed RNA polymerase subunit beta RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PAGR_g4061 DNA-directed RNA polymerase beta' subunit RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PAGR_g0436 DNA-directed RNA polymerase subunit alpha RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PAGR_g0111 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:paq03010] D PAGR_g2794 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PAGR_g3406 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PAGR_g0417 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PAGR_g0435 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PAGR_g0428 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PAGR_g0509 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PAGR_g0404 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PAGR_g0425 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PAGR_g3763 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PAGR_g0410 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PAGR_g0434 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PAGR_g0403 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PAGR_g0433 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PAGR_g0424 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PAGR_g3718 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PAGR_g1012 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PAGR_g0420 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PAGR_g0511 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PAGR_g0415 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PAGR_g3531 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PAGR_g0690 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D PAGR_g4065 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PAGR_g0414 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PAGR_g0411 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PAGR_g0412 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PAGR_g0423 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PAGR_g0426 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PAGR_g4063 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PAGR_g0512 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PAGR_g4064 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PAGR_g4066 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PAGR_g3764 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PAGR_g0421 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PAGR_g0430 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PAGR_g0418 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PAGR_g0437 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PAGR_g0427 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PAGR_g1015 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PAGR_g2410 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PAGR_g3736 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PAGR_g0416 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PAGR_g0413 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PAGR_g0422 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PAGR_g1451 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D PAGR_g3735 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PAGR_g0129 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D PAGR_g0419 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PAGR_g0429 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PAGR_g3186 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PAGR_g0182 50S ribosomal subunit L31 K02909 RP-L31; large subunit ribosomal protein L31 D PAGR_g2667 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D PAGR_g0130 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PAGR_g4186 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PAGR_g2411 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PAGR_g3187 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PAGR_g0432 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PAGR_gr07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr11 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr19 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr22 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr21 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr20 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr13 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr17 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr09 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr10 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:paq00970] D PAGR_gt29 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt30 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt04 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt77 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt62 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt08 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt71 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt24 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt19 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt22 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt21 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt20 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt82 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt59 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt31 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt33 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PAGR_gt36 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PAGR_gt34 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PAGR_gt35 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PAGR_gt43 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PAGR_gt05 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PAGR_gt61 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PAGR_gt60 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PAGR_gt45 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PAGR_gt54 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PAGR_gt55 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PAGR_gt57 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PAGR_gt58 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PAGR_gt12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PAGR_gt74 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PAGR_gt10 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PAGR_gt11 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PAGR_gt46 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PAGR_gt81 tRNA-His K14226 tRNA-His; tRNA His D PAGR_gt01 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt78 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt07 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt72 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt03 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt63 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt23 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt53 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt64 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt80 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt66 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt65 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt67 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt69 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt44 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt25 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PAGR_gt49 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PAGR_gt51 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PAGR_gt50 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PAGR_gt52 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt56 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt15 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt68 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt17 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt16 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt13 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt14 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PAGR_gt70 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PAGR_gt79 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PAGR_gt83 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PAGR_gt32 tRNA-Arg K14232 tRNA-Pro; tRNA Pro D PAGR_gt18 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PAGR_gt37 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PAGR_gt47 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PAGR_gt48 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PAGR_gt09 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PAGR_gt73 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PAGR_gt76 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PAGR_gt06 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D PAGR_gt38 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PAGR_gt75 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PAGR_gt39 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PAGR_gt41 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_gt26 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_gt27 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_gt28 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_gt40 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_gt42 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_g1271 glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAGR_g2552 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PAGR_g2172 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PAGR_g3010 glutaminyl-tRNA synthetase GlnS K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PAGR_g1003 alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAGR_g1890 aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAGR_g2776 asparaginyl-tRNA synthetase AsnS K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAGR_g4176 glycyl-tRNA synthetase alpha chain GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PAGR_g4175 glycyl-tRNA synthetase beta chain GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PAGR_g2413 Threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAGR_g2803 seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAGR_g0550 pyridoxal phosphate-dependent SelA K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D PAGR_g3151 cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PAGR_g1496 methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAGR_g0443 Methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PAGR_g3683 valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PAGR_g3028 leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAGR_g3529 isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAGR_g0908 lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAGR_g1878 arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAGR_g3382 prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAGR_g1169 histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PAGR_g2409 phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAGR_g2408 phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PAGR_g2335 tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAGR_g0372 tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:paq03060] D PAGR_g0431 Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PAGR_g4068 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D PAGR_g3724 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PAGR_g3240 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D PAGR_g3239 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D PAGR_g3241 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PAGR_g4183 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAGR_g3471 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PAGR_g0154 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D PAGR_g3472 SSecA regulator SecMecretion monitor SecM K13301 secM; secretion monitor D PAGR_g1011 signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PAGR_g0309 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D PAGR_g4085 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D PAGR_g4084 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D PAGR_g4083 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D PAGR_g3041 Sec-independent protein translocase TatE K03425 tatE; sec-independent protein translocase protein TatE D PAGR_g1131 signal peptidase I LepB K03100 lepB; signal peptidase I [EC:3.4.21.89] D PAGR_g3528 lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:paq04122] D PAGR_g1158 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAGR_g1161 3-mercaptopyruvate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PAGR_g0303 sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PAGR_g0402 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D PAGR_g0401 sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C D PAGR_g0400 sulfur relay protein TusD/DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D PAGR_g2742 sulfite reductase YccK K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D PAGR_g2631 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PAGR_g2934 molybdopterin-converting factor subunit 2 MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PAGR_g2938 molybdenum cofactor biosynthesis protein A MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PAGR_g2935 molybdopterin-converting factor subunit 1 MoaD K03636 moaD; sulfur-carrier protein D PAGR_g2865 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D PAGR_p239 thiazole biosynthesis adenylyltransferase ThiF K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D PAGR_g2936 molybdenum cofactor biosynthesis protein C MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PAGR_g3537 molybdopterin biosynthesis protein Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D PAGR_g2937 molybdenum cofactor biosynthesis protein B MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D PAGR_g3227 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PAGR_p241 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:paq03018] D PAGR_g0918 NUDIX hydrolase NudH K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D PAGR_g2671 ribonuclease E Rne K08300 rne; ribonuclease E [EC:3.1.26.12] D PAGR_g4132 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D PAGR_g3810 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAGR_g0960 enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAGR_g3717 polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PAGR_g2927 putative ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PAGR_g0503 ribonuclease R Rnr K12573 rnr; ribonuclease R [EC:3.1.13.1] D PAGR_g3715 cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PAGR_g4101 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PAGR_g4130 transcription termination factor Rho K03628 rho; transcription termination factor Rho D PAGR_g0164 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g2247 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g3534 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PAGR_g3776 60 kDa chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAGR_g0496 RNA chaperone Hfq K03666 hfq; host factor-I protein D PAGR_g1191 polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PAGR_g2922 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D PAGR_g3430 poly(A) polymerase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:paq03030] D PAGR_g1910 DNA polymerase III theta subunit HolE K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g3802 DNA polymerase II subunit beta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g1805 DNA polymerase II subunit beta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g3369 DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PAGR_g3391 DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PAGR_g3178 DNA polymerase III tau subunit DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PAGR_g2657 DNA polymerase III delta' subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PAGR_g3030 DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PAGR_g3584 DNA polymerase III psi subunit HolD K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D PAGR_g3682 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PAGR_g0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PAGR_g4011 replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PAGR_g3887 putative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PAGR_g1819 DnaB domain-containing protein helicase domain-containing protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PAGR_g0689 DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D PAGR_g3877 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PAGR_g4002 single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein D PAGR_g3370 ribonuclease HI RnhA K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PAGR_g3392 ribonuclease HII RnhB K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PAGR_g0094 DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAGR_g1266 DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAGR_g0114 DNA ligase YicF K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:paq03410] D PAGR_g2330 endonuclease III Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PAGR_g1121 uracil-DNA glycosylase Ung K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PAGR_g0848 A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D PAGR_g0132 formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PAGR_g2991 endonuclease VIII Nei K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D PAGR_g2968 AraC family transcriptional regulator Ada K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D PAGR_g0020 DNA-3-methyladenine glycosylase I Tag K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D PAGR_g0687 G/U mismatch-specific DNA glycosylase Mug K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D PAGR_g3807 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PAGR_g1994 exodeoxyribonuclease III XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PAGR_g1473 endonuclease IV Nfo K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D PAGR_g0094 DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAGR_g0906 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PAGR_g1266 DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAGR_g0114 DNA ligase YicF K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:paq03420] D PAGR_g2643 transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PAGR_g4003 UvrABC system protein A UvrA K03701 uvrA; excinuclease ABC subunit A D PAGR_g2940 excinuclease ABC subunit B UvrB K03702 uvrB; excinuclease ABC subunit B D PAGR_g2727 UvrABC system protein C UvrC K03703 uvrC; excinuclease ABC subunit C D PAGR_g4109 DNA helicase II UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PAGR_g0094 DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAGR_g1266 DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAGR_g0114 DNA ligase YicF K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:paq03430] D PAGR_g0996 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D PAGR_g0494 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D PAGR_g0917 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D PAGR_g4109 DNA helicase II UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PAGR_g1576 exodeoxyribonuclease I SbcB K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D PAGR_g1177 exodeoxyribonuclease VII large subunit XseA K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PAGR_g3228 exodeoxyribonuclease VII small subunit XseB K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PAGR_g1812 DNA polymerase III subunit epsilon K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D PAGR_g1909 exodeoxyribonuclease X exoX K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D PAGR_g0906 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PAGR_g3877 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PAGR_g4002 single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein D PAGR_g3391 DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PAGR_g0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PAGR_g3178 DNA polymerase III tau subunit DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PAGR_g3030 DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PAGR_g2657 DNA polymerase III delta' subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PAGR_g3369 DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PAGR_g1910 DNA polymerase III theta subunit HolE K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g3802 DNA polymerase II subunit beta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g1805 DNA polymerase II subunit beta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g3682 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PAGR_g3584 DNA polymerase III psi subunit HolD K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D PAGR_g1266 DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAGR_g0114 DNA ligase YicF K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAGR_g0369 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAGR_g0650 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:paq03440] D PAGR_g0906 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PAGR_g3877 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PAGR_g4002 single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein D PAGR_g0003 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D PAGR_g1134 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D PAGR_g3176 recombination protein RecR K06187 recR; recombination protein RecR D PAGR_g1001 recombinase A RecA K03553 recA; recombination protein RecA D PAGR_g0094 DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAGR_g1894 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PAGR_g1895 Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PAGR_g1893 Holliday junction resolvase RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PAGR_g0108 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PAGR_g0928 exodeoxyribonuclease V beta chain RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D PAGR_g0926 exodeoxyribonuclease V gamma chain RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D PAGR_g0929 exodeoxyribonuclease V alpha chain RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D PAGR_g3391 DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PAGR_g0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PAGR_g3178 DNA polymerase III tau subunit DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PAGR_g3030 DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PAGR_g2657 DNA polymerase III delta' subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PAGR_g3369 DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PAGR_g1910 DNA polymerase III theta subunit HolE K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g3802 DNA polymerase II subunit beta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g1805 DNA polymerase II subunit beta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g3682 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PAGR_g3584 DNA polymerase III psi subunit HolD K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D PAGR_g0181 primosomal protein N' PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D PAGR_g0510 primosomal replication protein Prib K02686 priB; primosomal replication protein N D PAGR_g3181 primosomal replication protein N' PriC K04067 priC; primosomal replication protein N'' D PAGR_g0022 primosomal protein I DnaT K02317 dnaT; DNA replication protein DnaT C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:paq03250] D PAGR_g0375 peptidyl-prolyl cis-trans isomerase A precursor PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:paq02010] D PAGR_g1252 thiosulfate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D PAGR_g0165 sulfate-binding protein precursor Sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D PAGR_g1253 sulfate transport system permease protein CysU K02046 cysU; sulfate/thiosulfate transport system permease protein D PAGR_g1254 sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D PAGR_g1255 sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D PAGR_g2448 nitrate transport protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D PAGR_g2447 nitrate transport permease protein NrtB K15577 nrtB; nitrate/nitrite transport system permease protein D PAGR_g2446 nitrate transport protein NasD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D PAGR_g0388 taurine-binding periplasmic protein precursor TauA K15551 tauA; taurine transport system substrate-binding protein D PAGR_g0390 taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein D PAGR_g0389 taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D PAGR_g1796 aliphatic sulfonates-binding protein SsuA K15553 ssuA; sulfonate transport system substrate-binding protein D PAGR_g2770 alkanesulfonate transporter substrate-binding subunit SsuA K15553 ssuA; sulfonate transport system substrate-binding protein D PAGR_g2772 aliphatic sulfonate transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D PAGR_g2773 aliphatic sulfonate transport ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D PAGR_g2952 molybdate-binding periplasmic protein ModA K02020 modA; molybdate transport system substrate-binding protein D PAGR_g4044 molybdate ABC transporter periplasmic molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein D PAGR_g0033 molybdate-binding periplasmic protein precursor ModA K02020 modA; molybdate transport system substrate-binding protein D PAGR_g2951 molybdenum transport system permease ModB K02018 modB; molybdate transport system permease protein D PAGR_g2950 molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PAGR_g2955 molybdenum transport ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D PAGR_g3797 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PAGR_g0766 family 1 extracellular solute-binding protein PotD K02012 afuA; iron(III) transport system substrate-binding protein D PAGR_g0767 putative ABC transporter permease ModB K02011 afuB; iron(III) transport system permease protein D PAGR_g3796 iron ABC transporter transmembrane protein K02011 afuB; iron(III) transport system permease protein D PAGR_g0765 ferric cations import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PAGR_g3795 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PAGR_g3504 thiamine ABC transporter periplasmic-binding protein TbpA K02064 thiB; thiamine transport system substrate-binding protein D PAGR_g3505 thiamine transport system permease ThiP K02063 thiP; thiamine transport system permease protein D PAGR_g3506 thiamine transport ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D PAGR_g2833 putrescine-binding periplasmic protein PotF K11073 potF; putrescine transport system substrate-binding protein D PAGR_g2830 putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein D PAGR_g2831 putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein D PAGR_g2832 putrescine transporter ATP-binding subunit PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D PAGR_g1040 glycine betaine-binding periplasmic protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D PAGR_g1041 glycine betaine/L-proline transport system permease proW K02001 proW; glycine betaine/proline transport system permease protein D PAGR_g1042 glycine betaine/L-proline transport ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D PAGR_g2133 glycine betaine ABC transporter substrate-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein D PAGR_g2907 transport system permease YehZ K05845 opuC; osmoprotectant transport system substrate-binding protein D PAGR_g2132 glycine betaine/carnitine/choline transport system permease OpuCB K05846 opuBD; osmoprotectant transport system permease protein D PAGR_g2134 nner membrane ABC transporter permease protein YehW K05846 opuBD; osmoprotectant transport system permease protein D PAGR_g2904 ABC transporter permease YehW K05846 opuBD; osmoprotectant transport system permease protein D PAGR_g2906 osmoprotectant uptake system permease YehY K05846 opuBD; osmoprotectant transport system permease protein D PAGR_g2131 choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D PAGR_g2905 ABC transporter YehX K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D PAGR_g2196 maltose-binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D PAGR_g2197 maltose transport system permease MalF K10109 malF; maltose/maltodextrin transport system permease protein D PAGR_g2198 maltose transport system permease MalG K10110 malG; maltose/maltodextrin transport system permease protein D PAGR_g2195 maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PAGR_g3957 lactose transport ATP-binding protein LacK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PAGR_g3955 multiple sugar-binding protein MsmE K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D PAGR_g3954 sugar ABC transporter permease YurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D PAGR_g3953 sugar ABC transporter permease AraQ K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D PAGR_g3742 toluene tolerance family protein YrbC K07323 mlaC; phospholipid transport system substrate-binding protein D PAGR_g3743 toluene tolerance ABC transporter periplasmic subunit YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PAGR_g3744 toluene tolerance ABC transporter permease subunit YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PAGR_g3741 anti-sigma factor antagonist YrbB K07122 mlaB; phospholipid transport system transporter-binding protein D PAGR_g3745 toluene tolerance ABC efflux transporter ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PAGR_g1646 D-ribose-binding protein precursor RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g3911 ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g3671 D-ribose-binding periplasmic protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g2234 ribose-binding periplasmic protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g0085 D-ribose-binding periplasmic protein precursor RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g1645 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D PAGR_g2232 ribose transport system permease RbsC K10440 rbsC; ribose transport system permease protein D PAGR_g3910 ribose transport system permease RbsC K10440 rbsC; ribose transport system permease protein D PAGR_g0084 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D PAGR_g3674 ribose transport system permease RbsC K10440 rbsC; ribose transport system permease protein D PAGR_g3673 ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAGR_g1644 ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAGR_g0083 ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAGR_g2233 ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAGR_g3909 ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAGR_g0082 high affinity ribose transport protein RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D PAGR_g2285 L-arabinose-binding periplasmic protein AraF K10537 araF; L-arabinose transport system substrate-binding protein D PAGR_g2283 L-arabinose transport system permease protein AraH K10538 araH; L-arabinose transport system permease protein D PAGR_g2284 L-arabinose transport ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D PAGR_g2321 ABC transporter periplasmic-binding protein YtfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein D PAGR_g2318 inner membrane ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein D PAGR_g2319 inner membrane ABC transporter permease YtfT K23509 ytfT; galactofuranose transport system permease protein D PAGR_g2320 ABC-type sugar transport system ATPase component YtfR K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D PAGR_g1488 periplasmic-binding protein/LacI transcriptional regulator MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D PAGR_g1490 galactoside transport system permease MglC K10541 mglC; methyl-galactoside transport system permease protein D PAGR_g1489 galactoside transport ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D PAGR_g0050 D-xylose transporter subunit XylF K10543 xylF; D-xylose transport system substrate-binding protein D PAGR_g0048 xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein D PAGR_g0049 D-xylose transport ATP-binding protein XylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D PAGR_g2440 D-ribose-binding periplasmic protein RbsB K17202 eryG; erythritol transport system substrate-binding protein D PAGR_g2437 ribose transport system permease protein RbsC K17203 eryF; erythritol transport system permease protein D PAGR_g2438 ribose transport ATP-binding protein RbsA K17204 eryE; erythritol transport system ATP-binding protein D PAGR_g1607 rhizopine-binding protein MocB K17213 K17213; inositol transport system substrate-binding protein D PAGR_g1609 ribose transport system permease RbsC K17214 K17214; inositol transport system permease protein D PAGR_g1608 galactoside transport ATP-binding protein MglA K17215 K17215; inositol transport system ATP-binding protein D PAGR_g1313 family 1 extracellular solute-binding protein MalE K17237 inoE; inositol-phosphate transport system substrate-binding protein D PAGR_g1314 sugar ABC transporter permease protein UgpA K17238 inoF; inositol-phosphate transport system permease protein D PAGR_g1315 inner membrane ABC transporter permease protein YcjP K17239 inoG; inositol-phosphate transport system permease protein D PAGR_g1316 lactose transport ATP-binding protein LacK K17240 inoK; inositol-phosphate transport system ATP-binding protein D PAGR_p180 glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D PAGR_g0319 glycerol-3-phosphate-binding periplasmic protein precursor UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D PAGR_p179 sugar ABC transporter permease YurN K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D PAGR_g0320 SN-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D PAGR_p178 L-arabinose transport system permease AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D PAGR_g0321 SN-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D PAGR_p181 maltose/maltodextrin import ATP-binding protein MalK K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D PAGR_g0322 SN-glycerol-3-phosphate transport ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D PAGR_g3250 phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D PAGR_g0058 phosphate-binding periplasmic protein precursor PstS K02040 pstS; phosphate transport system substrate-binding protein D PAGR_g0057 phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D PAGR_g1192 phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D PAGR_g0056 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D PAGR_g1193 phosphate transport system permease protein PstA1 K02038 pstA; phosphate transport system permease protein D PAGR_g0055 phosphate ABC transporter ATPase subunit PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PAGR_g1194 phosphate import ATP-binding protein PstB1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PAGR_g1640 phosphonates-binding periplasmic protein precursor PhnD K02044 phnD; phosphonate transport system substrate-binding protein D PAGR_g1641 phosphite transport system permease PtxC K02042 phnE; phosphonate transport system permease protein D PAGR_g1642 phosphonates transport system permease PhnE K02042 phnE; phosphonate transport system permease protein D PAGR_g1639 phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D PAGR_g1551 lysine-arginine-ornithine-binding periplasmic protein precursor ArgT K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D PAGR_g1367 histidine transport system permease protein HisM K10015 hisM; histidine transport system permease protein D PAGR_g1366 histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein D PAGR_g1368 histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g1365 lysine-arginine-ornithine-binding periplasmic protein ArgT K10014 hisJ; histidine transport system substrate-binding protein D PAGR_g2877 glutamine-binding periplasmic protein GlnH K10036 glnH; glutamine transport system substrate-binding protein D PAGR_g2878 glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein D PAGR_g2879 glutamine transport ATP-binding protein glnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g2827 arginine-binding periplasmic protein 2 ArtJ K09996 artJ; arginine transport system substrate-binding protein D PAGR_g2824 arginine-binding periplasmic protein 1 ArtI K09997 artI; arginine transport system substrate-binding protein D PAGR_g2826 arginine transport system permease protein ArtM K09998 artM; arginine transport system permease protein D PAGR_g2825 arginine transport system permease protein ArtQ K09999 artQ; arginine transport system permease protein D PAGR_g2823 arginine transport ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g3023 glutamate/aspartate periplasmic-binding protein GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein D PAGR_g3025 glutamate/aspartate transport system permease GltK K10002 gltK; glutamate/aspartate transport system permease protein D PAGR_g3024 glutamate/aspartate transport system permease GltJ K10003 gltJ; glutamate/aspartate transport system permease protein D PAGR_g3026 glutamate/aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g2887 nopaline-binding periplasmic protein NocT K10018 occT; octopine/nopaline transport system substrate-binding protein D PAGR_g2885 octopine transport system permease OccM K10019 occM; octopine/nopaline transport system permease protein D PAGR_g2886 octopine transport system permease OccQ K10020 occQ; octopine/nopaline transport system permease protein D PAGR_g2884 histidine transport ATP-binding protein HisP K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g0455 putative amino-acid ABC transporter-binding protein YhdW K09969 aapJ; general L-amino acid transport system substrate-binding protein D PAGR_g0454 amino acid ABC transporter permease protein YhdX K09970 aapQ; general L-amino acid transport system permease protein D PAGR_g0453 inner membrane amino-acid ABC transporter permease protein YhdY K09971 aapM; general L-amino acid transport system permease protein D PAGR_g0452 amino-acid ABC transporter ATP-binding protein YhdZ K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g1777 cystine transporter subunit FliY K02424 tcyA; L-cystine transport system substrate-binding protein D PAGR_g1778 inner membrane amino-acid ABC transporter permease protein YecS K10009 tcyB; L-cystine transport system permease protein D PAGR_g1779 amino-acid ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g0314 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D PAGR_g0315 high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D PAGR_g0316 high-affinity branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D PAGR_g0317 high-affinity branched-chain amino acid transport system permease protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D PAGR_g0318 high-affinity branched-chain amino acid transport system permease protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D PAGR_p064 D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D PAGR_g3379 D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D PAGR_g3378 D-methionine transport system permease MetI K02072 metI; D-methionine transport system permease protein D PAGR_g3377 D-methionine transport ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D PAGR_g3554 aliphatic amidase expression-regulating protein AmiC K11959 urtA; urea transport system substrate-binding protein D PAGR_g3555 high-affinity branched-chain amino acid transport system permease BraD K11960 urtB; urea transport system permease protein D PAGR_g3556 high-affinity branched-chain amino acid transport system permease LivM K11961 urtC; urea transport system permease protein D PAGR_g3557 high-affinity branched-chain amino acid transport ATP-binding protein BraF K11962 urtD; urea transport system ATP-binding protein D PAGR_g3558 high-affinity branched-chain amino acid transport ATP-binding protein BraG K11963 urtE; urea transport system ATP-binding protein D PAGR_g2941 high-affinity branched-chain amino acid transport ATP-binding protein BraG K11963 urtE; urea transport system ATP-binding protein D PAGR_g2089 periplasmic murein peptide-binding protein MppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2006 periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2007 periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2008 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D PAGR_g2009 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D PAGR_g2010 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D PAGR_g2011 oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D PAGR_g4155 dipeptide transport system periplasmic protein DppA K12368 dppA; dipeptide transport system substrate-binding protein D PAGR_g2121 eriplasmic dipeptide transport protein DppA K12368 dppA; dipeptide transport system substrate-binding protein D PAGR_g4154 dipeptide transport system permease DppB K12369 dppB; dipeptide transport system permease protein D PAGR_g4153 dipeptide transport system permease DppC K12370 dppC; dipeptide transport system permease protein D PAGR_g4152 dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein D PAGR_g4151 dipeptide transport ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein D PAGR_g2076 peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D PAGR_g2075 peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein D PAGR_g2074 peptide transport system permease protein SapC K19228 sapC; cationic peptide transport system permease protein D PAGR_g2073 peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein D PAGR_g2072 peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein D PAGR_g2861 family 5 extracellular solute-binding protein YliB K13889 gsiB; glutathione transport system substrate-binding protein D PAGR_p130 ABC transportter periplasmic substrate-binding protein YliB K13889 gsiB; glutathione transport system substrate-binding protein D PAGR_g2860 inner membrane ABC transporter permease YliC K13890 gsiC; glutathione transport system permease protein D PAGR_p131 ABC transporter permease YliC K13890 gsiC; glutathione transport system permease protein D PAGR_g2859 oligopeptide ABC transporter permease YliD K13891 gsiD; glutathione transport system permease protein D PAGR_p132 ABC transporter permease YliD K13891 gsiD; glutathione transport system permease protein D PAGR_g2862 putative ABC transporter ATP-binding protein YliA K13892 gsiA; glutathione transport system ATP-binding protein D PAGR_p129 ABC transporter ATP-binding protein YliA K13892 gsiA; glutathione transport system ATP-binding protein D PAGR_g1459 ABC-type dipeptide transport system periplasmic component YejA K13893 yejA; microcin C transport system substrate-binding protein D PAGR_g1458 inner membrane ABC transporter permease protein YejB K13894 yejB; microcin C transport system permease protein D PAGR_g1457 inner membrane ABC transporter permease protein YejE K13895 yejE; microcin C transport system permease protein D PAGR_g1456 ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein D PAGR_g3421 ferrichrome-binding periplasmic protein FhuD K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D PAGR_g3420 ferrichrome transport system permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D PAGR_g3422 ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D PAGR_g3416 vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D PAGR_g2406 vitamin B12 import system permease BtuC K06073 btuC; vitamin B12 transport system permease protein D PAGR_g2404 vitamin B12 import ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D PAGR_g1898 high-affinity zinc uptake system protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D PAGR_g1896 high-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein D PAGR_g1897 high-affinity zinc uptake system ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PAGR_p013 periplasmic iron-binding protein YfeA K11604 sitA; manganese/iron transport system substrate-binding protein D PAGR_p015 chelated iron transport system membrane protein YfeC K11605 sitC; manganese/iron transport system permease protein D PAGR_p016 chelated iron transport system membrane protein YfeD K11606 sitD; manganese/iron transport system permease protein D PAGR_p014 chelated iron transport system membrane protein YfeB K11607 sitB; manganese/iron transport system ATP-binding protein D PAGR_g2639 lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein D PAGR_g2641 lipoprotein-releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein D PAGR_g2640 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D PAGR_g1324 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D PAGR_g1323 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D PAGR_g1322 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D PAGR_g1321 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D PAGR_g3680 putative permease YjgP K07091 lptF; lipopolysaccharide export system permease protein D PAGR_g3679 putative permease YjgQ K11720 lptG; lipopolysaccharide export system permease protein D PAGR_g3751 LPS export porin complex cytoplasmic ABC-type ATPase subunit YhbG K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D PAGR_g0311 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D PAGR_g0310 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D PAGR_g2791 lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D PAGR_g3200 multidrug resistance ATP-binding protein MdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D PAGR_g3199 multidrug resistance ATP-binding protein MdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D PAGR_g0238 ABC transporter MsbA K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D PAGR_g1424 cyclolysin secretion/processing ATP-binding protein CyaB K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PAGR_g2810 cysteine ABC transporter permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D PAGR_g2809 cysteine ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D PAGR_g1431 ABC transporter ATP-binding protein YojI K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D PAGR_g1442 ABC transporter ATP binding component YddA K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:paq02060] D PAGR_g1260 phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D PAGR_g1261 phosphocarrier protein PtsH K02784 ptsH; phosphocarrier protein HPr D PAGR_g0741 PTS system glucose-specific EIICBA component PtsG K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D PAGR_g1259 glucose-specific phosphotransferase enzyme IIA component Crr K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PAGR_g2655 PTS system glucose-specific EIICB component PtsG K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D PAGR_g3011 PTS system N-acetylglucosamine-specific EIICBA component NagE K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PAGR_g2057 PTS system maltose- and glucose-specific EIICB component MalX K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D PAGR_g3942 PTS system sucrose-specific EIIBC component ScrA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D PAGR_g2576 PTS system beta-glucoside-specific EIIBCA component BglF K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D PAGR_p035 PTS system beta-glucoside-specific transporter subunit IIABC AscF K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D PAGR_g1916 PTS system alpha-glucoside-specific EIICB component AglA K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D PAGR_g3980 PTS system sucrose-specific EIIBC component ScrA K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D PAGR_g4164 PTS system mannitol-specific EIICBA component MtlA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D PAGR_g3274 Pts system, cellobiose-specific IIa component ChbA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAGR_g2528 PTS system, lactose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAGR_g0029 N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component ChbA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAGR_g3276 cellobiose-specific phosphotransferase enzyme IIB component CelA K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAGR_g2527 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAGR_g0026 cellobiose-specific phosphotransferase enzyme IIB component CelA K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAGR_g3275 Lichenan permease IIC component LicC K02761 celB; cellobiose PTS system EIIC component D PAGR_g2526 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D PAGR_g0027 cellobiose permease IIC component CelB K02761 celB; cellobiose PTS system EIIC component D PAGR_g1950 PTS system mannose-specific EIIAB component ManX K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D PAGR_g1949 mannose permease IIC component ManY K02795 manY; mannose PTS system EIIC component D PAGR_g1948 mannose permease IID component ManZ K02796 manZ; mannose PTS system EIID component D PAGR_g3363 glucitol/sorbitol-specific phosphotransferase IIA component SrlB K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D PAGR_g3362 glucitol/sorbitol-specific phosphotransferase IIB component SrlE K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D PAGR_g3361 glucitol/sorbitol permease IIC component SrlA K02783 srlA; glucitol/sorbitol PTS system EIIC component D PAGR_g0857 putative phosphotransferase IIA component SgcA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PAGR_g2242 PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PAGR_g0856 PEP-dependent phosphotransferase system subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D PAGR_g2246 sugar phosphotransferase component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D PAGR_g0855 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component D PAGR_g2245 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component D PAGR_g1470 multiphosphoryl transfer protein FruB K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D PAGR_g1699 PTS system fructose-specific EIIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g0716 PTS system fructose-specific EIIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g1472 PTS system fructose-specific EIIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g0611 PTS system fructose-specific EIIBBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g1698 fructose-like phosphotransferase enzyme IIB component 2 FrwB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D PAGR_g0717 fructose-like phosphotransferase enzyme IIB component 2 FrwB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D PAGR_g1697 Multiphosphoryl transfer protein FryA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D PAGR_g0610 heat-responsive suppressor HrsA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D PAGR_g0718 fructose-like phosphotransferase enzyme IIA component FrvA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D PAGR_g1471 1-phosphofructokinase FruK K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D PAGR_g0919 phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D PAGR_g3756 phosphotransferase system, phosphocarrier protein PtsO K08485 ptsO; phosphocarrier protein NPr D PAGR_g3754 nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:paq03070] D PAGR_g0705 outer membrane protein TolC K12340 tolC; outer membrane protein D PAGR_g0409 type 4 prepilin-like proteins leader peptide processing enzyme TapD K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D PAGR_g3240 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D PAGR_g3239 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D PAGR_g4068 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D PAGR_g3724 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PAGR_g0431 Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PAGR_g3241 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PAGR_g4183 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAGR_g3471 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PAGR_g3472 SSecA regulator SecMecretion monitor SecM K13301 secM; secretion monitor D PAGR_g0309 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D PAGR_g0154 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D PAGR_g1011 signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PAGR_g4085 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D PAGR_g4084 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D PAGR_g4083 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D PAGR_g3041 Sec-independent protein translocase TatE K03425 tatE; sec-independent protein translocase protein TatE D PAGR_g1684 putative type VI secretion system effector protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D PAGR_g1676 putative type VI secretion system effector protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D PAGR_g1583 hemolysin co-regulated protein Hcp1 K11903 hcp; type VI secretion system secreted protein Hcp D PAGR_g1584 hemolysin co-regulated protein Hcp1 K11903 hcp; type VI secretion system secreted protein Hcp D PAGR_g1664 type VI secretion system effector protein hcp K11903 hcp; type VI secretion system secreted protein Hcp D PAGR_g3636 putative type VI secretion system, effector protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D PAGR_g1656 type VI secretion system protein VasD K11906 vasD; type VI secretion system protein VasD D PAGR_g2452 type VI secretion system protein IcmF K11891 impL; type VI secretion system protein ImpL D PAGR_g1659 type VI secretion system protein IcmF K11891 impL; type VI secretion system protein ImpL D PAGR_g2451 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK D PAGR_g1658 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK D PAGR_g1674 type VI secretion system protein VasG K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:paq02020] D PAGR_g3251 phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PAGR_g3252 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D PAGR_g2201 alkaline phosphatase precursor PhoA K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAGR_g3250 phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D PAGR_g0058 phosphate-binding periplasmic protein precursor PstS K02040 pstS; phosphate transport system substrate-binding protein D PAGR_g2635 virulence sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D PAGR_g2634 two component transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D PAGR_g4173 virulence membrane protein PagC K07804 pagC; putatice virulence related protein PagC D PAGR_g0353 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D PAGR_g0352 osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D PAGR_g1426 outer membrane protein C OmpC K09475 ompC; outer membrane pore protein C D PAGR_g1071 outer membrane protein C OmpC K09475 ompC; outer membrane pore protein C D PAGR_g2434 outer membrane protein F OmpF K09476 ompF; outer membrane pore protein F D PAGR_g0253 OmpF K09476 ompF; outer membrane pore protein F D PAGR_g2777 outer membrane protein F OmpF K09476 ompF; outer membrane pore protein F D PAGR_g0158 sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D PAGR_g0159 DNA-binding transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D PAGR_g0573 EnvZ/OmpR regulon moderator YqjB K25864 mzrA; modulator protein MzrA D PAGR_g2104 two component sensor kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D PAGR_g2105 transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA D PAGR_g3413 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D PAGR_g1510 integral membrane sensor signal transduction histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D PAGR_g1509 Two-component system response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR D PAGR_g3699 multidrug resistance protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system D PAGR_g1514 multidrug resistance protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system D PAGR_g3698 multidrug resistance protein MdtB K07788 mdtB; multidrug efflux pump D PAGR_g1513 multidrug resistance protein MdtB K07788 mdtB; multidrug efflux pump D PAGR_g3697 multidrug resistance protein MdtC K07789 mdtC; multidrug efflux pump D PAGR_g1512 multidrug resistance protein MdtC K07789 mdtC; multidrug efflux pump D PAGR_g1511 Arabinose efflux permease YegB K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D PAGR_g1225 aminoglycoside efflux pump AcrD K18324 acrD; multidrug efflux pump D PAGR_g1858 two-component sensor kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D PAGR_g1859 two component transcriptional regulator PmrA K07771 basR; two-component system, OmpR family, response regulator BasR D PAGR_p091 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D PAGR_g0079 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D PAGR_g0080 transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D PAGR_g1862 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D PAGR_g1863 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D PAGR_g0723 flagellin FliC K02406 fliC; flagellin D PAGR_g1759 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_g1760 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_g1761 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_g1762 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_p113 flagellin FliC K02406 fliC; flagellin D PAGR_p148 flagellin protein FliC K02406 fliC; flagellin D PAGR_g1774 RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA D PAGR_g1864 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D PAGR_g0246 Osmosensitive K channel His kinase sensor KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PAGR_g3002 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PAGR_g0243 potassium-transporting ATPase A chain KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D PAGR_g0244 potassium-transporting ATPase B chain KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D PAGR_g0245 potassium-transporting ATPase C chain KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit D PAGR_g0242 hypothetical protein K01545 kdpF; potassium-transporting ATPase KdpF subunit D PAGR_g3758 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D PAGR_g3544 aerobic respiration control protein ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D PAGR_g1353 integral membrane sensor signal transduction histidine kinase QseC K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D PAGR_g1352 transcriptional regulatory protein TctD K07774 tctD; two-component system, OmpR family, response regulator TctD D PAGR_g1349 tricarboxylate transport protein TctA K07793 tctA; putative tricarboxylic transport membrane protein D PAGR_g1350 tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein D PAGR_g1351 tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein D PAGR_g0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PAGR_g0277 D-alanyl-D-alanine dipeptidase DdpX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PAGR_g1242 sensor kinase CitA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D PAGR_g1241 two-component system transcriptional regulatory protein CitB K07702 dpiA; two-component system, CitB family, response regulator CitB D PAGR_p201 two-component sensor protein DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D PAGR_p202 two-component response regulator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR D PAGR_g1492 NAD-dependent malic enzyme SfcA K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PAGR_g1227 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D PAGR_g1226 nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D PAGR_g3380 exopolysaccharide synthesis regulator RcsF K06080 rcsF; RcsF protein D PAGR_g1417 integral membrane sensor hybrid histidine kinase RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D PAGR_g1419 sensor-like histidine kinase YojN K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D PAGR_g1733 exopolysaccharide synthesis regulation protein RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D PAGR_g1418 exopolysaccharide synthesis regulation protein RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D PAGR_g0955 hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D PAGR_g2728 two component transcriptional regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D PAGR_g2731 cell division activating regulatory protein SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D PAGR_g1004 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D PAGR_g2963 virulence sensor protein BvgS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D PAGR_g2962 LuxR family two component transcriptional regulator FimZ K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ D PAGR_g2149 beta-lactamase AmpC K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D PAGR_g0744 type 1 Pili protein CsuE K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D PAGR_g0748 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D PAGR_g0749 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D PAGR_g0747 pili assembly chaperone SfmC K07346 fimC; fimbrial chaperone protein D PAGR_g3574 fimbrial chaperone protein MrkB K07346 fimC; fimbrial chaperone protein D PAGR_g3573 outer membrane usher protein HtrE K07347 fimD; outer membrane usher protein D PAGR_g2623 outer membrane usher protein HifC K07347 fimD; outer membrane usher protein D PAGR_g0746 outer membrane usher protein FimD K07347 fimD; outer membrane usher protein D PAGR_g3408 protein-PII uridylyltransferase GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D PAGR_g1147 nitrogen regulatory protein P-II GlnB K04751 glnB; nitrogen regulatory protein P-II 1 D PAGR_g0099 nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PAGR_g0098 nitrogen assimilation regulatory protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D PAGR_g0100 glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAGR_g4142 aerobic C4-dicarboxylate transport protein DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D PAGR_g3752 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor D PAGR_g1144 putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PAGR_g1146 two component transcriptional regulator YfhA K07715 glrR; two-component system, NtrC family, response regulator GlrR D PAGR_g1870 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PAGR_g0507 methyl-accepting chemotaxis protein I Tsr K03406 mcp; methyl-accepting chemotaxis protein D PAGR_p054 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1606 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_p147 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_p149 methyl-accepting chemotaxis serine transducer Tse K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0818 methyl-accepting chemotaxis protein TlpA K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0820 methyl-accepting chemotaxis protein McpB K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0822 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2550 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0870 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3446 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0034 Biofilm dispersion protein bdlA K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2654 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1914 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1919 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3633 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2909 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2119 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3901 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3949 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0595 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0607 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1869 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g1868 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g1720 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_p184 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g3922 methyl-accepting chemotaxis citrate transducer Tcp K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g0528 methyl-accepting chemotaxis protein II Tar K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_p098 Methyl-accepting chemotaxis citrate transducer Tar K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D PAGR_g1336 methyl-accepting chemotaxis protein II Tar K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D PAGR_g2969 methyl-accepting chemotaxis protein III Trg K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D PAGR_g1732 methyl-accepting chemotaxis protein III Trg K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D PAGR_g2686 methyl-accepting chemotaxis protein III Trg K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D PAGR_g3970 methyl-accepting chemotaxis protein II Tar K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D PAGR_g3979 aerotaxis receptor Aer K03776 aer; aerotaxis receptor D PAGR_g1867 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PAGR_g1866 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PAGR_g1872 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PAGR_g1871 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PAGR_g3289 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D PAGR_g3026 glutamate/aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g3025 glutamate/aspartate transport system permease GltK K10002 gltK; glutamate/aspartate transport system permease protein D PAGR_g3024 glutamate/aspartate transport system permease GltJ K10003 gltJ; glutamate/aspartate transport system permease protein D PAGR_g3023 glutamate/aspartate periplasmic-binding protein GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein D PAGR_g0381 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PAGR_g2051 enoyl-CoA hydratase/isomerase PaaF K13816 rpfF; DSF synthase D PAGR_p219 glutaminase 1 GlsA1 K01425 glsA; glutaminase [EC:3.5.1.2] D PAGR_g0837 cytochrome d ubiquinol oxidase subunit I CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PAGR_g2980 cytochrome d ubiquinol oxidase subunit I CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PAGR_g0838 cytochrome d ubiquinol oxidase subunit II CydB K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PAGR_g2979 cytochrome d ubiquinol oxidase subunit II CydB K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PAGR_g2978 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D PAGR_g0705 outer membrane protein TolC K12340 tolC; outer membrane protein D PAGR_g1524 amylovoran export outer membrane protein AmsH K01991 wza; polysaccharide biosynthesis/export protein D PAGR_g1525 low molecular weight protein-tyrosine-phosphatase AmsI K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D PAGR_g1526 putative tyrosine-protein kinase AmsA K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D PAGR_g4127 UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D PAGR_g4126 UDP-N-acetyl-D-mannosamine dehydrogenase WecC K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D PAGR_g2730 autoinducer synthase K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D PAGR_g1440 RNA polymerase sigma factor FecI K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D PAGR_g1439 anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor D PAGR_g2684 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D PAGR_g0845 ornithine decarboxylase SpeC K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:paq02024] D PAGR_g1008 S-ribosylhomocysteine lyase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D PAGR_g0496 RNA chaperone Hfq K03666 hfq; host factor-I protein D PAGR_g2029 anthranilate synthase component I TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PAGR_g2028 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PAGR_g2730 autoinducer synthase K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D PAGR_g3444 rhamnosyltransferase I subunit A RhlA K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-] D PAGR_g3445 rhamnosyltransferase I subunit B RhlB K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D PAGR_g1545 rhamnosyltransferase WcnY K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D PAGR_g2400 phospho-2-dehydro-3-deoxyheptonate aldolase AroH K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAGR_g2960 phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAGR_g1018 phospho-2-dehydro-3-deoxyheptonate aldolase AroF K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PAGR_g0079 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D PAGR_g0080 transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D PAGR_g1144 putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PAGR_g1146 two component transcriptional regulator YfhA K07715 glrR; two-component system, NtrC family, response regulator GlrR D PAGR_g1862 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D PAGR_g1863 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D PAGR_g3002 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PAGR_g2731 cell division activating regulatory protein SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D PAGR_g1380 spermidine/putrescine-binding periplasmic protein 2 PotD-A K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D PAGR_g2179 ABC transporter binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D PAGR_g1203 family 1 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D PAGR_g0255 family 1 extracellular solute-binding protein PotD K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D PAGR_g0256 spermidine/putrescine transport system permease protein PotC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D PAGR_g1378 spermidine/putrescine transport system permease protein PotC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D PAGR_g1204 sulfate transport system permease protein CysT K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D PAGR_g1205 sulfate transport system permease protein CysW K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D PAGR_g1379 putrescine transport system permease protein PotH K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D PAGR_g0257 ABC transporter permease subunit PotH K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D PAGR_g1206 ferric cations import ATP-binding protein FbpC K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D PAGR_g1383 ferric cations import ATP-binding protein FbpC1 K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D PAGR_g0258 sulfate/thiosulfate import ATP-binding protein CysA2 K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D PAGR_g0314 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D PAGR_g0315 high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D PAGR_g0316 high-affinity branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D PAGR_g0317 high-affinity branched-chain amino acid transport system permease protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D PAGR_g0318 high-affinity branched-chain amino acid transport system permease protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D PAGR_g2152 AHL-synthase EanI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184] D PAGR_g2151 AHL-dependent transcriptional regulator EanR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D PAGR_g1733 exopolysaccharide synthesis regulation protein RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D PAGR_g2051 enoyl-CoA hydratase/isomerase PaaF K13816 rpfF; DSF synthase D PAGR_g2052 diguanylate cyclase/phosphodiesterase YciR K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52] D PAGR_g1422 large repetitive protein YeeJ K20276 bapA; large repetitive protein D PAGR_g1963 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAGR_g0381 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PAGR_g4016 inc uptake regulation protein Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D PAGR_g2043 GTP cyclohydrolase-2 RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PAGR_g3236 riboflavin biosynthesis protein ribD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PAGR_p102 integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D PAGR_g2615 outer membrane protein OprM K18139 oprM; outer membrane protein, multidrug efflux system D PAGR_g2713 efflux pump outer membrane protein OprM K18139 oprM; outer membrane protein, multidrug efflux system D PAGR_g2089 periplasmic murein peptide-binding protein MppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2006 periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2007 periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2008 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D PAGR_g2009 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D PAGR_g2010 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D PAGR_g2011 oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D PAGR_p249 nickel-binding periplasmic protein NikA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PAGR_g0276 putative ABC transporter periplasmic-binding protein YddS K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PAGR_g3663 putative ABC transporter periplasmic-binding protein YddS K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PAGR_g1616 family 5 extracellular solute-binding protein YliB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PAGR_g1057 dipeptide ABC transport periplasmic binding protein Dpp K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PAGR_g0275 inner membrane ABC transporter permease protein YddR K02033 ABC.PE.P; peptide/nickel transport system permease protein D PAGR_g1617 peptide ABC transporter permease protein YliC K02033 ABC.PE.P; peptide/nickel transport system permease protein D PAGR_g1056 inner membrane ABC transporter permease YddR K02033 ABC.PE.P; peptide/nickel transport system permease protein D PAGR_p248 nickel transport system permease NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein D PAGR_p247 dipeptide transport system permease DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PAGR_g0274 inner membrane ABC transporter permease protein YddQ K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PAGR_g1618 dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PAGR_g1055 inner membrane ABC transporter permease YddQ K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PAGR_g0273 oligopeptide ABC transporter YddP K02031 ddpD; peptide/nickel transport system ATP-binding protein D PAGR_p246 putative ABC transporter ATP-binding protein YejF K02031 ddpD; peptide/nickel transport system ATP-binding protein D PAGR_g1619 ABC transporter ATP-binding protein YliA K02031 ddpD; peptide/nickel transport system ATP-binding protein D PAGR_g1054 dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D PAGR_g0272 oligopeptide ABC transporter YddO K02032 ddpF; peptide/nickel transport system ATP-binding protein D PAGR_g1053 oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D PAGR_g4183 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAGR_g4068 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D PAGR_g3724 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PAGR_g0431 Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PAGR_g3241 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PAGR_g3471 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PAGR_g0309 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D PAGR_g0154 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D PAGR_g1011 signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:paq02030] D PAGR_g0507 methyl-accepting chemotaxis protein I Tsr K03406 mcp; methyl-accepting chemotaxis protein D PAGR_p054 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1606 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_p147 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_p149 methyl-accepting chemotaxis serine transducer Tse K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0818 methyl-accepting chemotaxis protein TlpA K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0820 methyl-accepting chemotaxis protein McpB K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0822 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2550 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0870 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3446 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0034 Biofilm dispersion protein bdlA K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2654 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1914 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1919 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3633 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2909 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2119 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3901 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3949 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0595 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0607 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1869 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g1868 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g1720 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_p184 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g3922 methyl-accepting chemotaxis citrate transducer Tcp K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g0528 methyl-accepting chemotaxis protein II Tar K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_p098 Methyl-accepting chemotaxis citrate transducer Tar K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D PAGR_g1336 methyl-accepting chemotaxis protein II Tar K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D PAGR_g2969 methyl-accepting chemotaxis protein III Trg K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D PAGR_g1732 methyl-accepting chemotaxis protein III Trg K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D PAGR_g2686 methyl-accepting chemotaxis protein III Trg K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D PAGR_g3970 methyl-accepting chemotaxis protein II Tar K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D PAGR_g3979 aerotaxis receptor Aer K03776 aer; aerotaxis receptor D PAGR_g2196 maltose-binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D PAGR_g1646 D-ribose-binding protein precursor RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g3911 ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g3671 D-ribose-binding periplasmic protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g2234 ribose-binding periplasmic protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g0085 D-ribose-binding periplasmic protein precursor RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g1488 periplasmic-binding protein/LacI transcriptional regulator MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D PAGR_g4155 dipeptide transport system periplasmic protein DppA K12368 dppA; dipeptide transport system substrate-binding protein D PAGR_g2121 eriplasmic dipeptide transport protein DppA K12368 dppA; dipeptide transport system substrate-binding protein D PAGR_g1866 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PAGR_g1867 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PAGR_g1872 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PAGR_g1873 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D PAGR_g1871 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PAGR_g3289 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D PAGR_g1870 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PAGR_g1745 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D PAGR_g1739 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D PAGR_g1738 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PAGR_g1864 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D PAGR_g1865 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:paq02040] D PAGR_g1747 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D PAGR_g1746 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D PAGR_g1745 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D PAGR_g1744 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D PAGR_g1743 flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PAGR_g1742 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D PAGR_g1741 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D PAGR_g1740 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D PAGR_g1739 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D PAGR_g1738 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PAGR_g1737 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D PAGR_g1736 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D PAGR_g1735 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PAGR_g1734 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D PAGR_g1876 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D PAGR_g1875 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PAGR_g1874 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PAGR_g2683 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D PAGR_g2682 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D PAGR_g2681 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D PAGR_g2680 flagella basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D PAGR_g2679 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D PAGR_g2678 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D PAGR_g2677 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D PAGR_g2676 flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D PAGR_g2675 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D PAGR_g2674 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D PAGR_g2673 flagellar hook-associated protein 1 FlgK K02396 flgK; flagellar hook-associated protein 1 D PAGR_g2672 flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D PAGR_g0723 flagellin FliC K02406 fliC; flagellin D PAGR_g1759 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_g1760 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_g1761 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_g1762 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_p113 flagellin FliC K02406 fliC; flagellin D PAGR_p148 flagellin protein FliC K02406 fliC; flagellin D PAGR_g1758 flagellar hook-associated protein 2 FliD K02407 fliD; flagellar hook-associated protein 2 D PAGR_p114 flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2 D PAGR_g1757 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS D PAGR_g1756 flagellar export chaperone FliT K02423 fliT; flagellar protein FliT D PAGR_g1864 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D PAGR_g1865 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PAGR_g2684 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D PAGR_g2685 flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D PAGR_g1777 cystine transporter subunit FliY K02424 tcyA; L-cystine transport system substrate-binding protein D PAGR_g1775 flagella biosynthesis protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D PAGR_g0688 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D PAGR_g1862 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D PAGR_g1863 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D PAGR_g3752 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor D PAGR_g1774 RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D PAGR_g3810 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAGR_g0960 enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D PAGR_g4034 methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:paq01501] D PAGR_g2434 outer membrane protein F OmpF K09476 ompF; outer membrane pore protein F D PAGR_g0253 OmpF K09476 ompF; outer membrane pore protein F D PAGR_g2777 outer membrane protein F OmpF K09476 ompF; outer membrane pore protein F D PAGR_g1426 outer membrane protein C OmpC K09475 ompC; outer membrane pore protein C D PAGR_g1071 outer membrane protein C OmpC K09475 ompC; outer membrane pore protein C D PAGR_g3214 muropeptide transporter AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D PAGR_g2649 beta-hexosaminidase NagZ K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PAGR_g2349 HTH-type transcriptional regulator BlaA K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D PAGR_g2149 beta-lactamase AmpC K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D PAGR_g2089 periplasmic murein peptide-binding protein MppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2006 periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2007 periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2008 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D PAGR_g2009 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D PAGR_g2010 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D PAGR_g2011 oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D PAGR_g2350 beta-lactamase CTX-M-105 K17836 penP; beta-lactamase class A [EC:3.5.2.6] D PAGR_g2613 multidrug resistance protein MexA precursor MexA K03585 acrA; membrane fusion protein, multidrug efflux system D PAGR_g3184 acriflavine resistance protein A AcrA K03585 acrA; membrane fusion protein, multidrug efflux system D PAGR_g3185 acriflavine resistance protein B AcrB K18138 acrB; multidrug efflux pump D PAGR_g2614 acriflavine resistance protein B AcrB K18138 acrB; multidrug efflux pump D PAGR_g2615 outer membrane protein OprM K18139 oprM; outer membrane protein, multidrug efflux system D PAGR_g2713 efflux pump outer membrane protein OprM K18139 oprM; outer membrane protein, multidrug efflux system D PAGR_g1066 integral membrane sensor signal transduction histidine kinase BaeS K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D PAGR_g1067 two component transcriptional regulatory protein BaeR K18144 adeR; two-component system, OmpR family, response regulator AdeR D PAGR_g1069 acriflavine resistance protein B AcrB K18146 adeB; multidrug efflux pump D PAGR_g0705 outer membrane protein TolC K12340 tolC; outer membrane protein D PAGR_g0360 penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PAGR_g3034 penicillin-binding protein 2 MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PAGR_g0783 penicillin-binding protein 2 MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PAGR_g3485 peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PAGR_g3700 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:paq01502] D PAGR_g0277 D-alanyl-D-alanine dipeptidase DdpX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PAGR_g0591 D-alanine--D-alanine ligase A DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAGR_g3477 D-alanine--D-alanine ligase B DdlB K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAGR_g1975 alanine racemase, catabolic DadB K01775 alr; alanine racemase [EC:5.1.1.1] D PAGR_g3483 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PAGR_g3482 phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PAGR_g3479 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:paq01503] D PAGR_g2635 virulence sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D PAGR_g2634 two component transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D PAGR_g4156 sulfatase YhjW K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D PAGR_g3045 palmitoyl transferase CrcA K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D PAGR_p091 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D PAGR_p092 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase ArnC K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D PAGR_p093 bifunctional polymyxin resistance protein ArnA K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D PAGR_p094 polysaccharide deacetylase family protein YfbH K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D PAGR_p095 undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase ArnT K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D PAGR_p096 small multidrug resistance protein YfbW K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D PAGR_p097 small multidrug resistance protein YfbJ K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF D PAGR_g1858 two-component sensor kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D PAGR_g1859 two component transcriptional regulator PmrA K07771 basR; two-component system, OmpR family, response regulator BasR D PAGR_g2076 peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D PAGR_g2075 peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein D PAGR_g2074 peptide transport system permease protein SapC K19228 sapC; cationic peptide transport system permease protein D PAGR_g2073 peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein D PAGR_g2072 peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein D PAGR_g0158 sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D PAGR_g0159 DNA-binding transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D PAGR_g0493 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g0931 N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g1248 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g2388 ErfK/YbiS/YcfS/YnhG family protein K19236 ycfS; L,D-transpeptidase YcfS D PAGR_g3413 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D PAGR_g0093 thiol:disulfide interchange protein DsbA precursor DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D PAGR_g0375 peptidyl-prolyl cis-trans isomerase A precursor PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D PAGR_g3965 ultiple antibiotic resistance protein MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D PAGR_g2270 multiple antibiotic resistance protein MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D PAGR_g2613 multidrug resistance protein MexA precursor MexA K03585 acrA; membrane fusion protein, multidrug efflux system D PAGR_g3184 acriflavine resistance protein A AcrA K03585 acrA; membrane fusion protein, multidrug efflux system D PAGR_g3185 acriflavine resistance protein B AcrB K18138 acrB; multidrug efflux pump D PAGR_g2614 acriflavine resistance protein B AcrB K18138 acrB; multidrug efflux pump D PAGR_g0705 outer membrane protein TolC K12340 tolC; outer membrane protein D PAGR_g3394 UDP-N-acetylglucosamine acetyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:paq01000] C 01001 Protein kinases [BR:paq01001] D PAGR_g1554 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D PAGR_g3667 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D PAGR_g2157 toxin-antitoxin system, toxin component, HipA family K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D PAGR_g1526 putative tyrosine-protein kinase AmsA K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D PAGR_g3251 phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PAGR_g2635 virulence sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D PAGR_g0353 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D PAGR_g2104 two component sensor kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D PAGR_g0158 sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D PAGR_g1510 integral membrane sensor signal transduction histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D PAGR_g1858 two-component sensor kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D PAGR_g0079 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D PAGR_g0246 Osmosensitive K channel His kinase sensor KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PAGR_g3758 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D PAGR_g1353 integral membrane sensor signal transduction histidine kinase QseC K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D PAGR_g1066 integral membrane sensor signal transduction histidine kinase BaeS K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D PAGR_g3967 periplasmic sensor signal transduction histidine kinase QseC K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D PAGR_g1258 sensor protein CpxA K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D PAGR_g1227 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D PAGR_g1419 sensor-like histidine kinase YojN K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D PAGR_g1417 integral membrane sensor hybrid histidine kinase RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D PAGR_g0955 hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D PAGR_g2963 virulence sensor protein BvgS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D PAGR_g1242 sensor kinase CitA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D PAGR_p201 two-component sensor protein DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D PAGR_g1283 signal transduction histidine kinase YpdA K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D PAGR_g0099 nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PAGR_g1144 putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PAGR_g1866 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:paq01009] D PAGR_g0164 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g2247 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g3175 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D PAGR_g2455 type VI secretion system, Serine/threonine protein phosphatase PppA K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D PAGR_g1668 protein serine/threonine phosphatase PppA K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D PAGR_g3580 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:paq01002] D PAGR_g3528 lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36] D PAGR_g0409 type 4 prepilin-like proteins leader peptide processing enzyme TapD K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D PAGR_g0037 Plasminogen activator Pla K08566 pla; plasminogen activator [EC:3.4.23.48] D PAGR_g2992 pyrrolidone-carboxylate peptidase Pcp K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D PAGR_g2583 glutamine amidotransferase GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PAGR_g1179 GMP synthase large subunit GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PAGR_g1566 gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D PAGR_g1461 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D PAGR_g2379 NLP/P60 family lipoprotein YdhO K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D PAGR_g2181 NlpC/P60 family protein K13695 nlpC; probable lipoprotein NlpC D PAGR_g2403 NlpC/P60 family lipoprotein NlpC K13695 nlpC; probable lipoprotein NlpC D PAGR_g1363 amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PAGR_g3759 glutamate synthase GltA K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PAGR_g0060 glucosamine--fructose-6-phosphate aminotransferase GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PAGR_g1543 asparagine synthase WbpS K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAGR_g3822 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAGR_g3016 asparagine synthetase B AsnB K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PAGR_g2345 putative intracellular protease/amidase HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124] D PAGR_g3707 peptidase YhbO K05520 yhbO; deglycase [EC:3.5.1.124] D PAGR_g3226 oxidative-stress-resistance chaperone ThiJ K03152 thiJ; protein deglycase [EC:3.5.1.124] D PAGR_g2559 ThiH/PfpI family amidotransferase K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D PAGR_g2919 ErfK/YbiS/YcfS/YnhG family protein K19235 ybiS; L,D-transpeptidase YbiS D PAGR_g2388 ErfK/YbiS/YcfS/YnhG family protein K19236 ycfS; L,D-transpeptidase YcfS D PAGR_g2781 cell wall degradation amidase protein YcbB K21470 ycbB; L,D-transpeptidase YcbB D PAGR_g3271 Transfer inhibition protein Tir K07052 K07052; CAAX protease family protein D PAGR_g0263 CAAX amino Terminal protease family protein K07052 K07052; CAAX protease family protein D PAGR_g2774 aminopeptidase N PepN K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PAGR_g0265 oligopeptidase A PrlC K01414 prlC; oligopeptidase A [EC:3.4.24.70] D PAGR_g2144 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D PAGR_g0277 D-alanyl-D-alanine dipeptidase DdpX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PAGR_g0927 protease III PtrA K01407 ptrA; protease III [EC:3.4.24.55] D PAGR_g4141 zinc protease YhjJ K07263 pqqL; zinc protease [EC:3.4.24.-] D PAGR_g3681 leucyl aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PAGR_g1159 peptidase B PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D PAGR_g2255 renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PAGR_g0962 carboxypeptidase family Cpg2 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D PAGR_g1223 succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PAGR_g3677 acetylornithine deacetylase ArgE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PAGR_g2637 peptidase T PepT K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D PAGR_g2120 peptidase T PepT K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D PAGR_g3314 aminoacyl-histidine dipeptidase PepD K01270 pepD; dipeptidase D [EC:3.4.13.-] D PAGR_g2214 amidohydrolase AmhX K14665 amhX; amidohydrolase [EC:3.5.1.-] D PAGR_g3335 N-carbamoyl-L-amino acid hydrolase AmaB K02083 allC; allantoate deiminase [EC:3.5.3.9] D PAGR_g1899 peptidase YebA K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D PAGR_p043 methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PAGR_g3407 methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PAGR_g4076 Xaa-Pro dipeptidase PepQ K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D PAGR_g0890 Xaa-Pro aminopeptidase PepP K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D PAGR_g0980 alkaline phosphatase isozyme conversion protein K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-] D PAGR_g2103 carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D PAGR_g3727 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PAGR_g1939 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D PAGR_g0875 putative metalloprotease YggG K07387 K07387; metalloprotease [EC:3.4.24.-] D PAGR_g1201 peptidase YfgC K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D PAGR_g3399 protease EcfE K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D PAGR_p134 D-aminopeptidase DppA K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D PAGR_g1340 penicillin-insensitive murein endopeptidase MepA K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D PAGR_g1716 Mlc titration factor MtfA K09933 mtfA; MtfA peptidase D PAGR_p133 D-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D PAGR_g2101 putative protease YdgD K04775 ydgD; protease YdgD [EC:3.4.21.-] D PAGR_g3413 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D PAGR_g3767 protease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-] D PAGR_g3768 protease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-] D PAGR_g1908 protease II PtrB K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D PAGR_g1577 beta-lactamase DacD K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAGR_g3037 D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAGR_g2842 beta-lactamase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAGR_g2914 penicillin-binding protein 7 PbpG K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D PAGR_g1239 penicillin-binding protein AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D PAGR_g3731 penicillin-binding protein DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D PAGR_g3210 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PAGR_g1082 crotonase/enoyl-coenzyme A hydratase superfamily protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PAGR_g3833 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PAGR_g3208 ATP-dependent protease Lon K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D PAGR_g2756 putative protease La YcbZ K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D PAGR_g4019 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D PAGR_g3817 UV protection protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D PAGR_g2347 SOS-response transcriptional repressor UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D PAGR_g3090 putative prophage repressor protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D PAGR_g1131 signal peptidase I LepB K03100 lepB; signal peptidase I [EC:3.4.21.89] D PAGR_g1938 tail-specific protease precursor Prc K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D PAGR_g1990 protease IV SppA K04773 sppA; protease IV [EC:3.4.21.-] D PAGR_g2037 putative periplasmic protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D PAGR_g0340 Rhomboid protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D PAGR_g2599 muramoyltetrapeptide carboxypeptidase LdcA K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D PAGR_g0178 ATP-dependent protease HslV HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D PAGR_g2863 putative L-asparaginase precursor YbiK K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PAGR_g0325 gamma-glutamyltranspeptidase precursor Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PAGR_g3342 gamma-glutamyltranspeptidase precursor Ggt K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D PAGR_g1508 putative protease YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-] D PAGR_g3713 protease YhbV K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D PAGR_g3712 putative protease YhbU K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D PAGR_g1444 copper-exporting ATPase PmbA K03592 pmbA; PmbA protein D PAGR_g0532 peptide maturation protein PmbA K03592 pmbA; PmbA protein D PAGR_g1445 peptidase TldD K03568 tldD; TldD protein D PAGR_g0473 protease TldD K03568 tldD; TldD protein D PAGR_g1162 alpha-2-macroglobulin domain-containing protein YfhM K06894 yfhM; alpha-2-macroglobulin D PAGR_g0499 FtsH protease regulator HflC K04087 hflC; modulator of FtsH protease HflC D PAGR_g0498 FtsH protease regulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:paq01003] D PAGR_g0336 glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D PAGR_g4148 cellulose synthase catalytic subunit BcsA K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D PAGR_g3757 monofunctional biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D PAGR_g1163 penicillin-binding protein 1C PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D PAGR_g3424 penicillin-binding protein 1B MrcB K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D PAGR_g0360 penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PAGR_g3444 rhamnosyltransferase I subunit A RhlA K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-] D PAGR_g3445 rhamnosyltransferase I subunit B RhlB K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D PAGR_g4120 UDP-N-acetyl-D-mannosaminuronic acid transferase WecG K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D PAGR_g4122 4-alpha-L-fucosyltransferase WecF K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D PAGR_g1537 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PAGR_g4129 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PAGR_g2706 glucans biosynthesis glucosyltransferase H MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D PAGR_p101 cyclic periplasmic glucan biosynthesis protein NdvB K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] D PAGR_p226 zeaxanthin glucosyl transferase CrtX K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] D PAGR_g1861 trehalose-6-phosphate synthase OtsA K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D PAGR_g1727 glycosyltransferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] D PAGR_g1528 amylovoran biosynthesis glycosyl transferase AmsB K16700 amsB; amylovoran/stewartan biosynthesis glycosyltransferase AmsB/CpsE [EC:2.4.-.-] D PAGR_g1533 amylovoran biosynthesis glycosyl transferase AmsK K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:paq01005] D PAGR_g3394 UDP-N-acetylglucosamine acetyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D PAGR_g3393 lipid-A-disaccharide synthase LpxB K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D PAGR_g3473 UDP-3-0-acyl N-acetylglucosamine deacetylase LpxC K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D PAGR_g3396 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D PAGR_g3153 UDP-2,3-diacylglucosamine hydrolase LpxH K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D PAGR_g2790 tetraacyldisaccharide 4'-kinase LpxK K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D PAGR_g2700 lipid A biosynthesis lauroyl acyltransferase HtrB K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D PAGR_g1900 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase MsbB K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D PAGR_g3301 aspartyl/asparaginyl beta-hydroxylase AspH K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D PAGR_g0116 Lipid A biosynthesis acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D PAGR_g1462 phosphoesterase PA-phosphatase-like protein YeiU K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D PAGR_g0134 3-deoxy-D-manno-octulosonic-acid transferase KdtA K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D PAGR_p095 undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase ArnT K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D PAGR_g3045 palmitoyl transferase CrcA K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D PAGR_g4156 sulfatase YhjW K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D PAGR_g2461 2-dehydro-3-deoxyphosphooctonate aldolase KdsA K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D PAGR_g2787 3-deoxy-manno-octulosonate cytidylyltransferase KdsB K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D PAGR_g3748 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D PAGR_g3747 arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D PAGR_g0145 lipopolysaccharide heptosyltransferase 1 RfaC K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D PAGR_g0133 lipopolysaccharide core biosynthesis glycosyl transferase KdtX K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-] D PAGR_g0146 ADP-heptose--LPS heptosyltransferase II RfaF K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D PAGR_g0135 lipopolysaccharide core biosynthesis protein RfaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D PAGR_g0137 putative glycosyl transferase YibD K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D PAGR_g0144 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D PAGR_g0136 lipopolysaccharide core biosynthesis glycosyl transferase RfaQ K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D PAGR_g0138 sugar transferase RfaF K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D PAGR_g3323 phosphoheptose isomerase GmhA K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D PAGR_g3376 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D PAGR_g0699 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D PAGR_g0147 ADP-L-glycero-D-manno-heptose-6-epimerase HldD K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D PAGR_g1545 rhamnosyltransferase WcnY K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-] D PAGR_g4121 enterobacterial common antigen polymerase WzyE K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27] D PAGR_g1549 polysaccharide antigen chain regulator K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator) D PAGR_g1537 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PAGR_g4129 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:paq01011] D PAGR_g3739 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PAGR_g4072 UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PAGR_g3478 UDP-N-acetylmuramate--L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PAGR_g3481 UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PAGR_g3484 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PAGR_g0591 D-alanine--D-alanine ligase A DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAGR_g3477 D-alanine--D-alanine ligase B DdlB K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PAGR_g1975 alanine racemase, catabolic DadB K01775 alr; alanine racemase [EC:5.1.1.1] D PAGR_g0200 glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3] D PAGR_g2599 muramoyltetrapeptide carboxypeptidase LdcA K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D PAGR_g3482 phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PAGR_g3479 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PAGR_g0694 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAGR_g2563 membrane-associated phospholipid phosphatase YbjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAGR_g2841 undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D PAGR_g2687 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase D PAGR_g0360 penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PAGR_g3424 penicillin-binding protein 1B MrcB K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D PAGR_g1163 penicillin-binding protein 1C PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D PAGR_g3034 penicillin-binding protein 2 MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PAGR_g0783 penicillin-binding protein 2 MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PAGR_g3485 peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PAGR_g3700 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PAGR_g1577 beta-lactamase DacD K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAGR_g3037 D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAGR_g2842 beta-lactamase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PAGR_g3731 penicillin-binding protein DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D PAGR_g1239 penicillin-binding protein AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D PAGR_g2914 penicillin-binding protein 7 PbpG K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D PAGR_g3757 monofunctional biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D PAGR_g2919 ErfK/YbiS/YcfS/YnhG family protein K19235 ybiS; L,D-transpeptidase YbiS D PAGR_g2388 ErfK/YbiS/YcfS/YnhG family protein K19236 ycfS; L,D-transpeptidase YcfS D PAGR_g2781 cell wall degradation amidase protein YcbB K21470 ycbB; L,D-transpeptidase YcbB D PAGR_g0277 D-alanyl-D-alanine dipeptidase DdpX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PAGR_g1340 penicillin-insensitive murein endopeptidase MepA K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D PAGR_g2379 NLP/P60 family lipoprotein YdhO K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D PAGR_g1461 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D PAGR_g1899 peptidase YebA K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D PAGR_g3550 soluble lytic murein transglycosylase Slt K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PAGR_g0933 membrane-bound lytic murein transglycosylase A MltA K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D PAGR_g0997 membrane-bound lytic murein transglycosylase B MltB K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D PAGR_g0846 membrane-bound lytic murein transglycosylase C MltC K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D PAGR_g3373 membrane-bound lytic murein transglycosylase D MltD K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D PAGR_g2598 membrane-bound lytic murein transglycosylase E MltE K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29] D PAGR_g1142 putative transglycosylase YfhD K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D PAGR_g2659 aminodeoxychorismate lyase YceG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D PAGR_g3036 rare lipoprotein A RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PAGR_g0493 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g0931 N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g1248 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g2309 N-acetylmuramoyl-L-alanine amidase YbjR K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g2820 N-acetylmuramoyl-L-alanine amidase YbjR K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g3461 N-acetyl-anhydromuranmyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g2387 LPP repeat-containing protein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:paq01004] D PAGR_g2664 malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PAGR_g2665 3-oxoacyl-ACP synthase III FabH K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D PAGR_g1345 3-oxoacyl-ACP synthase FabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D PAGR_g2661 3-oxoacyl-ACP synthase II FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PAGR_g2663 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAGR_g2176 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PAGR_g2757 3-hydroxydecanoyl-ACP dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D PAGR_g3395 (3R)-hydroxymyristoyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PAGR_g2071 enoyl-ACP-reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D PAGR_g3159 acyl-CoA thioesterase I TesA K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D PAGR_g3196 acyl-CoA thioesterase II TesB K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D PAGR_g2018 acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D PAGR_g3204 acyl-CoA thioester hydrolase YbaW K12500 tesC; thioesterase III [EC:3.1.2.-] D PAGR_g3983 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PAGR_g1963 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAGR_g4021 glycerol-3-phosphate acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D PAGR_g2666 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D PAGR_g0692 acyl-phosphate glycerol 3-phosphate acyltransferase YgiH K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PAGR_g0721 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:paq01008] C 01006 Prenyltransferases [BR:paq01006] D PAGR_g3229 geranyltranstransferase IspA K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D PAGR_p225 geranylgeranyl pyrophosphate synthetase CrtE K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PAGR_g3737 octaprenyl-diphosphate synthase IspB K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D PAGR_g3401 undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PAGR_p230 phytoene synthase CrtB K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D PAGR_g0495 tRNA delta(2)-isopentenylpyrophosphate transferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PAGR_g4022 4-hydroxybenzoate octaprenyltransferase UbiA K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PAGR_g3219 protoheme IX farnesyltransferase CyoE K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:paq01007] D PAGR_g1271 glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAGR_g3010 glutaminyl-tRNA synthetase GlnS K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PAGR_g3429 glutamyl-tRNA synthetase GluQ K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D PAGR_g2335 tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAGR_g0372 tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PAGR_g3151 cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PAGR_g1878 arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAGR_g1496 methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAGR_g3529 isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAGR_g3683 valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PAGR_g3028 leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAGR_g0908 lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAGR_g1890 aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAGR_g2776 asparaginyl-tRNA synthetase AsnS K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAGR_g1169 histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PAGR_g4176 glycyl-tRNA synthetase alpha chain GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PAGR_g4175 glycyl-tRNA synthetase beta chain GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PAGR_g2803 seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAGR_g3382 prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAGR_g2413 Threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAGR_g1003 alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAGR_g2409 phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAGR_g2408 phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PAGR_g2778 aspartate aminotransferase AspC K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D PAGR_g0012 valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D PAGR_g1390 putative aminotransferase YfbQ K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D PAGR_g1285 aspartate aminotransferase YfdZ K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D PAGR_g4008 aromatic-amino-acid aminotransferase TyrB K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D PAGR_g3330 aspartate aminotransferase YbdL K14287 ybdL; methionine transaminase [EC:2.6.1.88] D PAGR_g1560 histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PAGR_g0148 2-amino-3-ketobutyrate coenzyme A ligase Kbl K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D PAGR_g2944 8-amino-7-oxononanoate synthase BioF K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PAGR_g1880 putative aminotransferase B PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PAGR_g0379 acetylornithine/succinyldiaminopimelate aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PAGR_g2433 succinylornithine transaminase ArgM K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D PAGR_g1624 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D PAGR_g1381 4-aminobutyrate aminotransferase PuuE K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PAGR_p195 diaminobutyrate--2-oxoglutarate aminotransferase Dat K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D PAGR_g2946 adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D PAGR_g3419 glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D PAGR_g0206 branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PAGR_g2797 phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PAGR_g3336 class V aminotransferase PucG K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D PAGR_p091 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D PAGR_g4124 TDP-4-keto-6-deoxy-D-glucose transaminase RffA K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:paq00194] D PAGR_g0062 ATP synthase epsilon chain AtpC K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PAGR_g0063 ATP synthase beta chain AtpD K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PAGR_g0064 ATP synthase gamma chain AtpG K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PAGR_g0065 ATP synthase alpha chain AtpA K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PAGR_g0066 ATP synthase delta chain AtpH K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PAGR_g0067 ATP synthase B chain AtpF K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PAGR_g0068 ATP synthase C chain AtpE K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PAGR_g0069 ATP synthase a chain AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PAGR_g0070 ATP synthase protein I AtpI K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:paq03000] D PAGR_g1801 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAGR_g1721 modification methylase EcoRII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAGR_g2282 L-arabinose operon regulatory protein AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D PAGR_g1589 HTH-type transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR D PAGR_g1590 HTH-type transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS D PAGR_g3994 AraC family transcriptional regulator SoxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator D PAGR_g3965 ultiple antibiotic resistance protein MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D PAGR_g2270 multiple antibiotic resistance protein MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D PAGR_g3546 right origin-binding protein Rob K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D PAGR_g0851 melibiose operon regulatory protein MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein D PAGR_p079 AraC family transcriptional regulator LumQ K07506 K07506; AraC family transcriptional regulator D PAGR_g2968 AraC family transcriptional regulator Ada K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D PAGR_g0938 glycine cleavage system transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PAGR_g3346 HTH-type transcriptional regulator DsdC K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PAGR_g0209 HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D PAGR_g4093 HTH-type transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D PAGR_g2574 LysR family transcriptional regulator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D PAGR_g0195 oxidative stress regulatory protein OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D PAGR_g0884 chromosome initiation inhibitor IciA K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PAGR_g2040 O-acetyl-L-serine binding protein CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D PAGR_g1611 LysR family transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D PAGR_g3950 HTH-type transcriptional regulator YeaT K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D PAGR_g2349 HTH-type transcriptional regulator BlaA K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D PAGR_g1610 nitrogen assimilation regulatory protein Nac K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D PAGR_g0474 HTH-type transcriptional activator AaeR K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D PAGR_g0201 HTH-type transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D PAGR_g3567 deoxyribose operon repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D PAGR_g0341 glycerol-3-phosphate regulon repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D PAGR_g1238 putative HTH-type transcriptional regulator YulB K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator D PAGR_g3366 glucitol operon repressor SrlR K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor D PAGR_g0534 putative HTH-type transcriptional regulator YihW K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor D PAGR_g1580 lactose operon repressor LacI K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D PAGR_p137 LacI family transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAGR_g0018 HTH-type transcriptional regulator RafR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAGR_g0047 xylose operon regulatory protein XylR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAGR_g0087 ribose operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAGR_g3591 putative HTH-type transcriptional regulator PurR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAGR_g3672 HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAGR_g3702 HTH-type transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAGR_g2223 purR-like HTH-type transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAGR_g1467 ribose operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAGR_g1487 HTH-type transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PAGR_g0017 HTH-type transcriptional regulator KdgR K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D PAGR_g0180 HTH-type transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D PAGR_g0387 HTH-type transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D PAGR_g3489 LacI family transcriptional regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D PAGR_g3940 sucrose operon repressor ScrR K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D PAGR_g3272 HTH-type transcriptional regulator AscG K03487 ascG; LacI family transcriptional regulator, asc operon repressor D PAGR_p036 HTH-type transcriptional regulator AscG K03487 ascG; LacI family transcriptional regulator, asc operon repressor D PAGR_g2381 HTH-type transcriptional repressor purR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D PAGR_g0328 HTH-type transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D PAGR_g2897 HTH-type transcriptional regulator IdnR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D PAGR_g0740 maltose regulon regulatory protein MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein D PAGR_g1915 GntR family transcriptional regulator YidP K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator D PAGR_g1629 GntR family transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D PAGR_g2892 histidine utilization repressor HutC K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D PAGR_g0858 fatty acyl-responsive regulator FarR K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor D PAGR_g1972 fatty acid metabolism regulator protein FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D PAGR_g3456 pyruvate dehydrogenase complex repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PAGR_g3602 GntR family regulatory protein YcbG K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PAGR_g4039 uxu operon transcriptional regulator UxuR K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D PAGR_g0575 exu regulon transcriptional regulator ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D PAGR_g3281 L-lactate dehydrogenase operon regulatory protein LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D PAGR_g1346 rhizopine catabolism regulatory protein MocR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PAGR_g1382 GntR family transcriptional regulator MocR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PAGR_g1505 putative HTH-type transcriptional regulator YdfH K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor D PAGR_g0233 GntR family transcriptional regulator YjjM K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism D PAGR_g1929 HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D PAGR_g3183 HTH-type transcriptional regulator AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D PAGR_g0125 TetR family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator D PAGR_g2735 putative HTH-type transcriptional regulator YcdC K09017 rutR; TetR/AcrR family transcriptional regulator D PAGR_p119 HTH-type transcriptional regulator YcdC K09017 rutR; TetR/AcrR family transcriptional regulator D PAGR_g2374 putative HTH-type transcriptional regulator YdhM K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PAGR_g2551 TetR family transcriptional regulator YdhM K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PAGR_g0196 TetR family transcriptional regulator YijC K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D PAGR_g2617 HTH-type transcriptional regulator UidR K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D PAGR_g0074 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D PAGR_g2807 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PAGR_g1602 leucine-responsive regulatory protein Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PAGR_g3201 putative HTH-type transcriptional regulator YbaO K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D PAGR_g2731 cell division activating regulatory protein SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D PAGR_g2151 AHL-dependent transcriptional regulator EanR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D PAGR_g1733 exopolysaccharide synthesis regulation protein RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D PAGR_g2188 HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D PAGR_g2366 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D PAGR_g2716 MarR family transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D PAGR_g1038 transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D PAGR_g2513 transcriptional regulator HosA K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D PAGR_g4158 organic hydroperoxide resistance transcriptional regulator OhrR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D PAGR_g3164 HTH-type transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D PAGR_g3993 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D PAGR_g2903 HTH-type transcriptional regulator YcgE K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes D PAGR_g3008 ferric uptake regulation protein Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PAGR_g4016 inc uptake regulation protein Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D PAGR_g4035 acetate operon repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D PAGR_g0728 pca regulon regulatory protein PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D PAGR_g1941 pectin degradation repressor protein KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D PAGR_g3908 putative HTH-type transcriptional regulator YiaJ K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor D PAGR_g0381 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D PAGR_g2112 fumarate nitrate reduction regulatory protein Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D PAGR_g1157 BadM/Rrf2 family transcriptional regulator YfhP K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D PAGR_g0502 HTH-type transcriptional repressor YjeB K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D PAGR_g2274 HTH-type transcriptional regulator iscR K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB D PAGR_g2211 arsenical resistance operon repressor ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D PAGR_g2537 arsenical resistance operon repressor ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D PAGR_g2263 putative HTH-type transcriptional regulator YdcN K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D PAGR_g2872 transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D PAGR_g0039 HTH-type transcriptional regulator RpiR K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon D PAGR_g2231 HTH-type transcriptional regulator RpiR K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon D PAGR_g1903 HTH-type transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D PAGR_g4071 biotin/acetyl-CoA-carboxylase ligase BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PAGR_g0456 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PAGR_g3549 trp operon repressor TrpR K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D PAGR_g1076 sigma-54 dependent transcriptional regulator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D PAGR_g3738 sugar fermentation stimulation protein B SfsB K07724 ner; Ner family transcriptional regulator D PAGR_g3503 ABC-type transport system periplasmic component YabN K11925 sgrR; SgrR family transcriptional regulator D PAGR_g3578 transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D PAGR_g1565 XRE family transcriptional regulator PuuR K14056 puuR; HTH-type transcriptional regulator, repressor for puuD D PAGR_g2156 toxin-antitoxin system, antitoxin component, Xre family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D PAGR_g3223 Fis family GAF modulated sigma54 specific transcriptional regulator AcoR K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D PAGR_g3412 carbohydrate diacid regulator CdaR K02647 cdaR; carbohydrate diacid regulator D PAGR_g2954 transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein D PAGR_g4162 HTH-type transcriptional regulator YiaG K07726 K07726; putative transcriptional regulator D PAGR_g1798 toxin-antitoxin system, antitoxin component, Xre family K07726 K07726; putative transcriptional regulator D PAGR_g0183 methionine repressor MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D PAGR_g1784 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PAGR_g2575 putative transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator D PAGR_g2529 transcriptional antiterminator BglB K03491 licR; probable licABCH operon transcriptional regulator D PAGR_g3212 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D PAGR_p003 plasmid partition protein B ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PAGR_g4081 NusG antitermination factor RfaH K05785 rfaH; transcriptional antiterminator RfaH D PAGR_g0484 arginine repressor ArgR K03402 argR; transcriptional regulator of arginine metabolism D PAGR_g3014 N-acetylglucosamine repressor NagC K02565 nagC; N-acetylglucosamine repressor D PAGR_g3072 xylose Operon repressor NagC K02565 nagC; N-acetylglucosamine repressor D PAGR_g3958 xylose repressor XylR K02565 nagC; N-acetylglucosamine repressor D PAGR_g2129 MalT transcriptional repressor Mlc K15545 mlc; transcriptional regulator of PTS gene D PAGR_g4166 mannitol repressor MtlR K02562 mtlR; mannitol operon repressor D PAGR_g2085 transcriptional regulatory protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D PAGR_g1215 glycine cleavage system transcriptional repressor GcvR K03567 gcvR; glycine cleavage system transcriptional repressor D PAGR_g2078 Psp operon transcriptional activator PspF K03974 pspF; psp operon transcriptional activator D PAGR_g2081 phage shock protein C PspC K03973 pspC; phage shock protein C D PAGR_g3300 glycerol metabolism operon regulatory protein DhaR K05880 dhaR; transcriptional activator for dhaKLM operon D PAGR_g2494 AlpA family phage transcriptional regulator K07733 alpA; prophage regulatory protein D PAGR_g0865 alginate biosynthesis nucleoside diphosphate kinase regulator AlgH K07735 algH; putative transcriptional regulator D PAGR_g3428 DnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PAGR_g3237 transcriptional regulator YbaD K07738 nrdR; transcriptional repressor NrdR D PAGR_g3311 transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl D PAGR_g3131 putative antirepressor protein Cro K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D PAGR_g3488 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:paq03021] D PAGR_g0436 DNA-directed RNA polymerase subunit alpha RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PAGR_g4062 DNA-directed RNA polymerase subunit beta RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PAGR_g4061 DNA-directed RNA polymerase beta' subunit RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PAGR_g0111 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PAGR_g0688 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D PAGR_g0993 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D PAGR_g1126 RNA polymerase sigma-E factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PAGR_g1440 RNA polymerase sigma factor FecI K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D PAGR_g0312 RNA polymerase sigma-32 factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D PAGR_g3752 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor D PAGR_g1774 RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA D PAGR_g3509 RNA polymerase associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D PAGR_g3722 transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA D PAGR_g3234 N utilization substance protein B NusB K03625 nusB; transcription antitermination protein NusB D PAGR_g4067 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PAGR_g3762 stringent starvation protein A SspA K03599 sspA; stringent starvation protein A D PAGR_g3761 stringent starvation protein B SspB K03600 sspB; stringent starvation protein B D PAGR_g1127 sigma-E factor negative regulatory protein RseA K03597 rseA; sigma-E factor negative regulatory protein RseA D PAGR_g1128 sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB D PAGR_g1129 sigma-E factor regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC D PAGR_g3428 DnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PAGR_g3730 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D PAGR_g0350 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D PAGR_g4130 transcription termination factor Rho K03628 rho; transcription termination factor Rho D PAGR_g3385 transcriptional antiterminator Rof K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:paq03019] D PAGR_g2671 ribonuclease E Rne K08300 rne; ribonuclease E [EC:3.1.26.12] D PAGR_g0471 ribonuclease G CafA K08301 rng; ribonuclease G [EC:3.1.26.-] D PAGR_g1132 ribonuclease III Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3] D PAGR_g0503 ribonuclease R Rnr K12573 rnr; ribonuclease R [EC:3.1.13.1] D PAGR_g0489 oligoribonuclease Orn K13288 orn; oligoribonuclease [EC:3.1.-.-] D PAGR_g4132 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D PAGR_g2927 putative ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PAGR_g3715 cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PAGR_g4101 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PAGR_g3810 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAGR_g0960 enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAGR_g3717 polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PAGR_g4130 transcription termination factor Rho K03628 rho; transcription termination factor Rho D PAGR_g0164 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g2247 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PAGR_g3534 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PAGR_g3776 60 kDa chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAGR_g0496 RNA chaperone Hfq K03666 hfq; host factor-I protein D PAGR_g1191 polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PAGR_g2922 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D PAGR_g3430 poly(A) polymerase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D PAGR_g0918 NUDIX hydrolase NudH K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D PAGR_g1004 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D PAGR_g0466 diguanylate cyclase/phosphodiesterase YhdA K18765 csrD; RNase E specificity factor CsrD D PAGR_g0176 regulator of ribonuclease activity A RraA K02553 rraA; regulator of ribonuclease activity A D PAGR_g3687 cytoplasmic protein YjgD K09893 rraB; regulator of ribonuclease activity B D PAGR_g3755 putative P-loop ATPase YhbJ K06958 rapZ; RNase adapter protein RapZ D PAGR_g2100 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D PAGR_g3425 ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:paq03011] D PAGR_g2794 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PAGR_g3406 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PAGR_g0417 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PAGR_g0435 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PAGR_g0428 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PAGR_g0509 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PAGR_g0404 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PAGR_g0425 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PAGR_g3763 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PAGR_g0410 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PAGR_g0434 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PAGR_g0403 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PAGR_g0433 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PAGR_g0424 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PAGR_g3718 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PAGR_g1012 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PAGR_g0420 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PAGR_g0511 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PAGR_g0415 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PAGR_g3531 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PAGR_g0690 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D PAGR_g4065 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PAGR_g0414 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PAGR_g0411 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PAGR_g0412 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PAGR_g0423 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PAGR_g0426 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PAGR_g0512 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PAGR_g4064 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PAGR_g4066 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PAGR_g4063 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PAGR_g3764 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PAGR_g0421 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PAGR_g0430 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PAGR_g0418 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PAGR_g0437 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PAGR_g0427 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PAGR_g1015 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PAGR_g2410 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PAGR_g3736 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PAGR_g0416 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PAGR_g0413 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PAGR_g0422 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PAGR_g3735 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PAGR_g0129 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D PAGR_g0419 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PAGR_g0429 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PAGR_g3186 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PAGR_g0182 50S ribosomal subunit L31 K02909 RP-L31; large subunit ribosomal protein L31 D PAGR_g2667 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D PAGR_g0130 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PAGR_g4186 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PAGR_g2411 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PAGR_g3187 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PAGR_g0432 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PAGR_g1451 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D PAGR_gr20 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr13 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr17 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr09 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr10 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr11 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr19 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr22 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr21 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:paq03009] D PAGR_g1132 ribonuclease III Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3] D PAGR_g0489 oligoribonuclease Orn K13288 orn; oligoribonuclease [EC:3.1.-.-] D PAGR_g1133 GTP-binding protein Era K03595 era; GTPase D PAGR_g3734 GTPase YhbZ K03979 obgE; GTPase [EC:3.6.5.-] D PAGR_g3428 DnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PAGR_g3722 transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA D PAGR_g3234 N utilization substance protein B NusB K03625 nusB; transcription antitermination protein NusB D PAGR_g4067 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PAGR_g1453 16S rRNA pseudouridylate synthase A RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D PAGR_g3515 dimethyladenosine transferase KsgA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D PAGR_g0442 ribosomal RNA small subunit methyltransferase B RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PAGR_g3585 ribosomal RNA small subunit methyltransferase C RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D PAGR_g0308 putative methylase YhhF K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D PAGR_g0867 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D PAGR_g1933 rRNA methyltransferase F YebU K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D PAGR_g0071 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PAGR_g3487 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D PAGR_g0559 tetrapyrrole methylase family protein YraL K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D PAGR_g0266 SAM-dependent methyltransferase YhiQ K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D PAGR_g1946 ribosomal RNA large subunit methyltransferase A RrmA K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D PAGR_g0504 TrmH family RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D PAGR_g3728 ribosomal RNA large subunit methyltransferase J RrmJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D PAGR_g2880 SAM-dependent methyltransferase YbiN K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D PAGR_g0584 putative ribosomal RNA small subunit methyltransferase D YgjO K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D PAGR_g3033 rRNA large subunit methyltransferase YbeA K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D PAGR_g2744 SAM-dependent methyltransferase YccW K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D PAGR_g0264 DNA utilization protein YhiR K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D PAGR_g2763 N6-Adenine-specific DNA methylase YcbY K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D PAGR_g0940 putative RNA 2'-O-ribose methyltransferase MtfA K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D PAGR_g1165 ribosomal RNA large subunit methyltransferase N YfgB K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D PAGR_g0956 23S rRNA 5-methyluridine methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D PAGR_g2828 23S rRNA uracil-5-methyltransferase RumB K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D PAGR_g2291 ribosomal large subunit pseudouridine synthase A RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PAGR_g3510 ribosomal large subunit pseudouridine synthase A RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PAGR_g2033 ribosomal large subunit pseudouridine synthase B RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D PAGR_g2670 ribosomal large subunit pseudouridine synthase C RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D PAGR_g1023 ribosomal large subunit pseudouridine synthase D RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D PAGR_g2629 ribosomal large subunit pseudouridine synthase E RluE K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D PAGR_p026 ribosomal large subunit pseudouridine synthase F RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D PAGR_g1033 tRNA/rRNA methyltransferase YfiF K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D PAGR_g3583 ribosomal-protein-alanine acetyltransferase RimI K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D PAGR_g2690 ribosomal-protein-alanine acetyltransferase RimJ K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D PAGR_g2835 ribosomal protein S6 modification protein RimK K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D PAGR_g1013 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D PAGR_g2857 ribosomal protein S12 methylthiotransferase YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D PAGR_g2798 YcaO-like family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D PAGR_g0458 ribosomal protein L11 methyltransferase PrmA K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D PAGR_g1338 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YfcB K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D PAGR_g2636 transcription factor YcfD K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D PAGR_g2671 ribonuclease E Rne K08300 rne; ribonuclease E [EC:3.1.26.12] D PAGR_g0471 ribonuclease G CafA K08301 rng; ribonuclease G [EC:3.1.26.-] D PAGR_g0863 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D PAGR_g3287 ATP-independent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D PAGR_g3715 cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D PAGR_g1123 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D PAGR_g0488 ribosome small subunit-dependent GTPase A EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PAGR_g1172 GTP-binding protein EngA K03977 engA; GTPase D PAGR_g0497 GTP-binding protein hflX K03665 hflX; GTPase D PAGR_g0448 SUA5/yciO/yrdC domain-containing protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PAGR_g0110 GTP pyrophosphokinase SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PAGR_g3720 ribosome-binding factor A RbfA K02834 rbfA; ribosome-binding factor A D PAGR_g3723 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D PAGR_g3149 S4 RNA-binding domain-containing protein YbcJ K14761 rlbA; ribosome-associated protein D PAGR_g3032 iojap-like protein YbeB K09710 ybeB; ribosome-associated protein D PAGR_g3020 metalloprotease YbeY K07042 ybeY; probable rRNA maturation factor D PAGR_g3729 RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D PAGR_g4167 conserved hypothetical protein YibL K14762 yibL; ribosome-associated protein D PAGR_g0531 alpha helix protein YjgA K09889 yjgA; ribosome-associated protein D PAGR_g2758 ribosome modulation factor Rmf K03812 rmf; ribosome modulation factor D PAGR_g3753 sigma(54) modulation protein YhbH K05808 hpf; ribosome hibernation promoting factor D PAGR_g1021 ribosomal subunit interface protein YfiA K05809 raiA; ribosome-associated inhibitor A D PAGR_g2473 GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase D PAGR_g2668 putative metal-binding protein YceD K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:paq03016] D PAGR_g0262 ribonuclease Z Rnz K00784 rnz; ribonuclease Z [EC:3.1.26.11] D PAGR_g0695 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D PAGR_g1271 glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAGR_g3382 prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PAGR_g3529 isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PAGR_g3028 leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAGR_g1496 methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PAGR_g3010 glutaminyl-tRNA synthetase GlnS K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PAGR_g1878 arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAGR_g0908 lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PAGR_g1890 aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAGR_g1003 alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PAGR_g2776 asparaginyl-tRNA synthetase AsnS K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PAGR_g2413 Threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PAGR_g2803 seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PAGR_g3151 cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PAGR_g3683 valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PAGR_g1169 histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PAGR_g2409 phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PAGR_g2408 phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PAGR_g2335 tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAGR_g0372 tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PAGR_g0104 D-tyrosyl-tRNA deacylase Dtd K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D PAGR_g2653 diadenosine tetraphosphate (Ap4A) hydrolase family protein YcfF K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PAGR_g0852 tRNA (guanine-N(7)-)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D PAGR_g3381 potassium-tellurite ethidium and proflavin transporter YaeB K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D PAGR_g1357 tRNA pseudouridine synthase A TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D PAGR_g3719 tRNA pseudouridine synthase B TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D PAGR_g0989 tRNA pseudouridine synthase D TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D PAGR_g1158 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAGR_g0448 SUA5/yciO/yrdC domain-containing protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PAGR_g0495 tRNA delta(2)-isopentenylpyrophosphate transferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PAGR_g4182 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D PAGR_g0072 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PAGR_g0517 adenosine-3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PAGR_g4185 ribonuclease P protein component RnpA K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D PAGR_g2377 ribonuclease T Rnt K03683 rnt; ribonuclease T [EC:3.1.13.-] D PAGR_g0123 ribonuclease Rph K00989 rph; ribonuclease PH [EC:2.7.7.56] D PAGR_g2055 exoribonuclease II Rnb K01147 rnb; exoribonuclease II [EC:3.1.13.1] D PAGR_g1964 ribonuclease D Rnd K03684 rnd; ribonuclease D [EC:3.1.13.5] D PAGR_g3426 2'-5' RNA ligase LigT K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D PAGR_g3568 ABC transporter ATP-binding protein YjjK K06020 ettA; energy-dependent translational throttle protein EttA D PAGR_g4176 glycyl-tRNA synthetase alpha chain GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PAGR_g4175 glycyl-tRNA synthetase beta chain GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PAGR_g3429 glutamyl-tRNA synthetase GluQ K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D PAGR_g3168 cys-tRNA(Pro) hydrolase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D PAGR_g1552 Prolyl-tRNA synthetase YeaK K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D PAGR_g1141 tRNA-specific adenosine deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D PAGR_g4014 tRNA-dihydrouridine synthase A DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D PAGR_g0457 tRNA-dihydrouridine synthase B DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D PAGR_g2923 tRNA-dihydrouridine synthase C DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D PAGR_g3018 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D PAGR_g1887 methyltransferase YecO K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D PAGR_g1886 methyltransferase YecP K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D PAGR_g2785 SAM-dependent methyltransferase SmtA K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D PAGR_g3543 tRNA/rRNA methyltransferase LasT K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D PAGR_g0198 tRNA (uracil-5-)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D PAGR_g1014 tRNA (guanine-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PAGR_g1033 tRNA/rRNA methyltransferase YfiF K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D PAGR_g0109 tRNA guanosine-2'-O-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D PAGR_g1156 tRNA/rRNA methyltransferase YfhQ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D PAGR_g0156 tRNA/rRNA methyltransferase YibK K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D PAGR_g1125 O-methyltransferase YfiC K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D PAGR_g0946 tRNA pseudouridine synthase C TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D PAGR_g2291 ribosomal large subunit pseudouridine synthase A RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PAGR_g3510 ribosomal large subunit pseudouridine synthase A RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PAGR_g2631 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PAGR_g2091 C32 tRNA thiolase YdaO K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D PAGR_g0303 sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PAGR_g0402 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D PAGR_g0401 sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C D PAGR_g0400 sulfur relay protein TusD/DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D PAGR_g2742 sulfite reductase YccK K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D PAGR_g0900 tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D PAGR_g3686 tRNA-hydroxylase MiaE K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D PAGR_g1344 5-methylaminomethyl-2-thiouridine methyltransferase YfcK K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D PAGR_g3243 S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D PAGR_g3203 Queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PAGR_g0967 6-pyruvoyl tetrahydrobiopterin synthase YgcM K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D PAGR_g0965 Radical SAM domain-containing protein YgcF K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PAGR_g0943 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D PAGR_g0490 putative electron transport protein YjeS K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D PAGR_g0282 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D PAGR_g3242 queuine tRNA-ribosyltransferase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D PAGR_g3227 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PAGR_g3387 tRNA(Ile)-lysidine synthase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D PAGR_g1220 acetyltransferase YpfI K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D PAGR_g1961 peptidase YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D PAGR_g0691 O-sialoglycoprotein endopeptidase Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D PAGR_g0492 putative ATPase YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D PAGR_g0935 molybdopterin biosynthesis protein YgdL K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D PAGR_g0503 ribonuclease R Rnr K12573 rnr; ribonuclease R [EC:3.1.13.1] D PAGR_g3717 polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:paq03012] D PAGR_g2048 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D PAGR_g3721 translation initiation factor IF-2 InfB K02519 infB; translation initiation factor IF-2 D PAGR_g2412 translation initiation factor IF-3 InfC K02520 infC; translation initiation factor IF-3 D PAGR_g0392 ABC transporter YheS K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D PAGR_g3405 elongation factor Tsf K02357 tsf; elongation factor Ts D PAGR_g4069 elongation factor Tu-A TufA K02358 tuf; elongation factor Tu D PAGR_g0406 elongation factor Tu-A TufA K02358 tuf; elongation factor Tu D PAGR_g0405 elongation factor G FusA K02355 fusA; elongation factor G D PAGR_g2465 peptide chain release factor 1 PrfA K02835 prfA; peptide chain release factor 1 D PAGR_g3403 ribosome recycling factor Frr K02838 frr; ribosome recycling factor D PAGR_g2464 protein methyltransferase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D PAGR_g2472 peptidyl-tRNA hydrolase Pth K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D PAGR_g2812 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D PAGR_g1464 elongation factor P-like protein YeiP K02356 efp; elongation factor P D PAGR_g3773 elongation factor P Efp K02356 efp; elongation factor P D PAGR_g3769 putative lysyl-tRNA synthetase PoxA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D PAGR_g3774 lysine 2 3-aminomutase YjeK K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D PAGR_g1342 transporting ATPase YfcM K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D PAGR_g0907 peptide chain release factor 2 PrfB K02836 prfB; peptide chain release factor 2 D PAGR_g0774 peptide chain release factor 3 PrfC K02837 prfC; peptide chain release factor 3 D PAGR_g0440 cytoplasmic protein YhdL K09890 arfA; alternative ribosome-rescue factor D PAGR_g3383 class I peptide chain release factor YaeJ K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:paq03110] D PAGR_g2813 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D PAGR_g1025 Chaperone protein clpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D PAGR_g3209 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D PAGR_g0177 ATP-dependent Hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D PAGR_g3175 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D PAGR_g3534 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PAGR_g1516 heat shock protein YegD K04046 yegD; hypothetical chaperone protein D PAGR_g3776 60 kDa chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAGR_g3533 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D PAGR_g3511 DnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein D PAGR_g0355 33 kDa chaperonin HslO K04083 hslO; molecular chaperone Hsp33 D PAGR_g1120 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D PAGR_g0008 small heat shock protein IbpA K04080 ibpA; molecular chaperone IbpA D PAGR_g1703 small heat shock protein Ibp K04080 ibpA; molecular chaperone IbpA D PAGR_g0356 heat shock protein 15 HslR K04762 hslR; ribosome-associated heat shock protein Hsp15 D PAGR_g3777 10 kDa chaperonin GroS K04078 groES; chaperonin GroES D PAGR_g3413 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D PAGR_g3727 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PAGR_g0069 ATP synthase a chain AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PAGR_g0747 pili assembly chaperone SfmC K07346 fimC; fimbrial chaperone protein D PAGR_g3574 fimbrial chaperone protein MrkB K07346 fimC; fimbrial chaperone protein D PAGR_g0154 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D PAGR_g2428 spheroplast protein Y Spy K06006 cpxP; periplasmic protein CpxP/Spy D PAGR_g0160 periplasmic protein CpxP K06006 cpxP; periplasmic protein CpxP/Spy D PAGR_g3703 beta-hexosaminidase NahA K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PAGR_g0375 peptidyl-prolyl cis-trans isomerase A precursor PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D PAGR_g3152 peptidyl-prolyl cis-trans isomerase B PpiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D PAGR_g3206 peptidyl-prolyl cis-trans isomerase D PpiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D PAGR_g0398 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D PAGR_g0515 FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase FklB K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D PAGR_g3527 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase FkpB K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D PAGR_g0396 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D PAGR_g4134 peptidyl-prolyl cis-trans isomerase C PpiC K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D PAGR_g3513 chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D PAGR_g1443 thioredoxin 1 TrxA K03671 TXN; thioredoxin D PAGR_g4131 thioredoxin 1 TrxA K03671 TXN; thioredoxin D PAGR_g1032 thioredoxin 2 TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D PAGR_g3161 thioredoxin-like protein YbbN K05838 ybbN; putative thioredoxin D PAGR_g2838 glutaredoxin-1 GrxA K03674 grxA; glutaredoxin 1 D PAGR_g0153 glutaredoxin-3 GrxC K03676 grxC; glutaredoxin 3 D PAGR_g2378 monothiol glutaredoxin YdhD K07390 grxD; monothiol glutaredoxin D PAGR_g0093 thiol:disulfide interchange protein DsbA precursor DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D PAGR_g1971 disulfide bond formation protein B DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D PAGR_g0905 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D PAGR_g3782 thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D PAGR_g1327 disulfide oxidoreductase DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D PAGR_g3939 thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:paq04131] D PAGR_g1164 nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PAGR_g1985 glyceraldehyde-3-phosphate dehydrogenase GapA K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PAGR_g3811 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g2959 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g1902 pyruvate kinase II PykA K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAGR_g2386 pyruvate kinase I PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAGR_g3175 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:paq04121] C 03051 Proteasome [BR:paq03051] D PAGR_g3175 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:paq03032] D PAGR_g3370 ribonuclease HI RnhA K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PAGR_g1801 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAGR_g1721 modification methylase EcoRII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAGR_g4051 transcriptional regulator HU subunit alpha HupA K05787 hupA; DNA-binding protein HU-alpha D PAGR_g3207 DNA-binding protein HU-beta HupB K03530 hupB; DNA-binding protein HU-beta D PAGR_g2407 integration host factor subunit alpha IhfA K04764 ihfA; integration host factor subunit alpha D PAGR_g2793 integration host factor subunit beta IhfB K05788 ihfB; integration host factor subunit beta D PAGR_g0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PAGR_g4011 replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PAGR_g3887 putative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PAGR_g1819 DnaB domain-containing protein helicase domain-containing protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PAGR_g0023 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D PAGR_g0689 DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D PAGR_g3877 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PAGR_g4002 single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein D PAGR_g3391 DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PAGR_g0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PAGR_g3682 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PAGR_g3030 DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PAGR_g2657 DNA polymerase III delta' subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PAGR_g3369 DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PAGR_g3178 DNA polymerase III tau subunit DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PAGR_g3584 DNA polymerase III psi subunit HolD K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D PAGR_g1910 DNA polymerase III theta subunit HolE K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g3802 DNA polymerase II subunit beta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g1805 DNA polymerase II subunit beta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g3392 ribonuclease HII RnhB K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PAGR_g0094 DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAGR_g1266 DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAGR_g0114 DNA ligase YicF K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAGR_g2276 DNA replication terminus site-binding protein Tus K10748 tus; DNA replication terminus site-binding protein D PAGR_g0369 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAGR_g0650 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAGR_g3004 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication D PAGR_g1200 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D PAGR_g1416 DNA gyrase subunit A GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PAGR_g0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PAGR_g0720 topoisomerase IV subunit A ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PAGR_g0710 topoisomerase IV subunit B ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PAGR_g2039 DNA topoisomerase I TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PAGR_g3879 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D PAGR_g1992 DNA topoisomerase III TopB K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:paq03036] D PAGR_g1801 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAGR_g1721 modification methylase EcoRII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAGR_g1132 ribonuclease III Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3] D PAGR_p048 global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS D PAGR_g2002 DNA-binding protein H-NS Hns K03746 hns; DNA-binding protein H-NS D PAGR_g2867 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS D PAGR_g4051 transcriptional regulator HU subunit alpha HupA K05787 hupA; DNA-binding protein HU-alpha D PAGR_g3207 DNA-binding protein HU-beta HupB K03530 hupB; DNA-binding protein HU-beta D PAGR_g2407 integration host factor subunit alpha IhfA K04764 ihfA; integration host factor subunit alpha D PAGR_g2793 integration host factor subunit beta IhfB K05788 ihfB; integration host factor subunit beta D PAGR_g3546 right origin-binding protein Rob K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D PAGR_g0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PAGR_g0556 DnaA initiator-associating protein DiaA K12961 diaA; DnaA initiator-associating protein D PAGR_g2745 heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D PAGR_g2876 DNA protection during starvation protein Dps K04047 dps; starvation-inducible DNA-binding protein D PAGR_g0456 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PAGR_g0496 RNA chaperone Hfq K03666 hfq; host factor-I protein D PAGR_g0884 chromosome initiation inhibitor IciA K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PAGR_g2807 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PAGR_g1602 leucine-responsive regulatory protein Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PAGR_g1450 37kDa nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein D PAGR_g2782 chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB D PAGR_g2783 chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE D PAGR_g2784 chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF D PAGR_g3475 cell division protein FtsA K03590 ftsA; cell division protein FtsA D PAGR_g0986 cell division protein FtsB K05589 ftsB; cell division protein FtsB D PAGR_g0310 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D PAGR_g3485 peptidoglycan synthase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PAGR_g3700 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PAGR_g2806 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D PAGR_g3486 cell division protein FtsL K03586 ftsL; cell division protein FtsL D PAGR_g0179 cell division protein FtsN K03591 ftsN; cell division protein FtsN D PAGR_g3476 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D PAGR_g3480 cell division protein FtsW K03588 ftsW; cell division protein FtsW D PAGR_g0311 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D PAGR_g3474 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PAGR_g1265 cell division protein ZipA K03528 zipA; cell division protein ZipA D PAGR_g0888 Cell division protein zapA K09888 zapA; cell division protein ZapA D PAGR_g0175 cytoplasmic protein YiiU K09892 zapB; cell division protein ZapB D PAGR_g2765 conserved cytoplasmic protein YcbW K18657 zapC; cell division protein ZapC D PAGR_g3468 putative cytoplasmic protein YacF K18778 zapD; cell division protein ZapD D PAGR_g3765 AFG1-family ATPase YhcM K06916 zapE; cell division protein ZapE D PAGR_g0514 cell envelope opacity-associated protein A YtfB K07269 ytfB; cell division protein YtfB D PAGR_g0493 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g0931 N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g1248 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PAGR_g2613 multidrug resistance protein MexA precursor MexA K03585 acrA; membrane fusion protein, multidrug efflux system D PAGR_g3184 acriflavine resistance protein A AcrA K03585 acrA; membrane fusion protein, multidrug efflux system D PAGR_g1967 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D PAGR_g1966 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D PAGR_g1965 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D PAGR_g2753 cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA D PAGR_g0125 TetR family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator D PAGR_g3004 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication D PAGR_g0467 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D PAGR_g0468 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D PAGR_g0469 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D PAGR_g3035 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D PAGR_p002 plasmid partition protein A ParA K03496 parA; chromosome partitioning protein D PAGR_p003 plasmid partition protein B ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PAGR_g0720 topoisomerase IV subunit A ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PAGR_g0710 topoisomerase IV subunit B ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PAGR_g0072 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PAGR_g0071 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PAGR_g4111 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D PAGR_g0904 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D PAGR_g1497 putative ATPase Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning D PAGR_g0377 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D PAGR_g0095 GTP-binding protein EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:paq03400] D PAGR_g2967 methylated-DNA--protein-cysteine methyltransferase Ogt K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D PAGR_g2999 deoxyribodipyrimidine photo-lyase PhrB K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D PAGR_g1121 uracil-DNA glycosylase Ung K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PAGR_g0848 A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D PAGR_g2330 endonuclease III Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PAGR_g3470 nucleoside triphosphate pyrophosphohydrolase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PAGR_p173 MutT-like protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PAGR_g0126 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PAGR_g1430 alkylated DNA repair protein AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D PAGR_g0687 G/U mismatch-specific DNA glycosylase Mug K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D PAGR_g3807 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PAGR_g2968 AraC family transcriptional regulator Ada K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D PAGR_g0020 DNA-3-methyladenine glycosylase I Tag K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D PAGR_g0132 formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PAGR_g2991 endonuclease VIII Nei K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D PAGR_g1994 exodeoxyribonuclease III XthA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PAGR_g1473 endonuclease IV Nfo K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D PAGR_g4053 endonuclease V Nfi K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D PAGR_g0906 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PAGR_g1266 DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAGR_g0114 DNA ligase YicF K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PAGR_g0094 DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7] D PAGR_g4003 UvrABC system protein A UvrA K03701 uvrA; excinuclease ABC subunit A D PAGR_g2940 excinuclease ABC subunit B UvrB K03702 uvrB; excinuclease ABC subunit B D PAGR_g2727 UvrABC system protein C UvrC K03703 uvrC; excinuclease ABC subunit C D PAGR_g2427 excinuclease ABC subunit C domain-containing protein Cho K05984 cho; excinuclease Cho [EC:3.1.25.-] D PAGR_g4109 DNA helicase II UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PAGR_g4062 DNA-directed RNA polymerase subunit beta RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PAGR_g4061 DNA-directed RNA polymerase beta' subunit RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PAGR_g0436 DNA-directed RNA polymerase subunit alpha RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PAGR_g0111 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PAGR_g2643 transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PAGR_g0996 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D PAGR_g0494 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D PAGR_g0917 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D PAGR_g1576 exodeoxyribonuclease I SbcB K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D PAGR_g1177 exodeoxyribonuclease VII large subunit XseA K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PAGR_g3228 exodeoxyribonuclease VII small subunit XseB K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PAGR_g1812 DNA polymerase III subunit epsilon K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D PAGR_g1909 exodeoxyribonuclease X exoX K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D PAGR_g3391 DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PAGR_g0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PAGR_g3682 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PAGR_g3030 DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PAGR_g2657 DNA polymerase III delta' subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PAGR_g3369 DNA polymerase III epsilon subunit DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PAGR_g3178 DNA polymerase III tau subunit DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PAGR_g3584 DNA polymerase III psi subunit HolD K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D PAGR_g1910 DNA polymerase III theta subunit HolE K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g3802 DNA polymerase II subunit beta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g1805 DNA polymerase II subunit beta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D PAGR_g3877 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PAGR_g4002 single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein D PAGR_g0369 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAGR_g0650 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAGR_g1722 very short patch repair protein Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D PAGR_g0928 exodeoxyribonuclease V beta chain RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D PAGR_g0926 exodeoxyribonuclease V gamma chain RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D PAGR_g0929 exodeoxyribonuclease V alpha chain RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D PAGR_g1001 recombinase A RecA K03553 recA; recombination protein RecA D PAGR_g1894 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PAGR_g1895 Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PAGR_g1893 Holliday junction resolvase RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PAGR_g2060 crossover junction endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D PAGR_g0181 primosomal protein N' PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D PAGR_g0510 primosomal replication protein Prib K02686 priB; primosomal replication protein N D PAGR_g3181 primosomal replication protein N' PriC K04067 priC; primosomal replication protein N'' D PAGR_g0022 primosomal protein I DnaT K02317 dnaT; DNA replication protein DnaT D PAGR_g3254 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D PAGR_g3253 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D PAGR_g3579 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D PAGR_g0003 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF D PAGR_g0108 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PAGR_g1134 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D PAGR_g3176 recombination protein RecR K06187 recR; recombination protein RecR D PAGR_g1118 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D PAGR_g3257 recombination associated protein RdgC K03554 rdgC; recombination associated protein RdgC D PAGR_g1452 helicase YejH K19789 radD; DNA repair protein RadD D PAGR_g3664 ATPase YjgR K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D PAGR_g1416 DNA gyrase subunit A GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PAGR_g0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PAGR_g2039 DNA topoisomerase I TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PAGR_g4051 transcriptional regulator HU subunit alpha HupA K05787 hupA; DNA-binding protein HU-alpha D PAGR_g3207 DNA-binding protein HU-beta HupB K03530 hupB; DNA-binding protein HU-beta D PAGR_g3138 RecT family phage recombinase K07455 recT; recombination protein RecT D PAGR_g0456 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PAGR_g2407 integration host factor subunit alpha IhfA K04764 ihfA; integration host factor subunit alpha D PAGR_g2793 integration host factor subunit beta IhfB K05788 ihfB; integration host factor subunit beta D PAGR_g4101 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PAGR_p048 global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS D PAGR_g2002 DNA-binding protein H-NS Hns K03746 hns; DNA-binding protein H-NS D PAGR_g2867 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS D PAGR_g3320 DNA polymerase IV DinB K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D PAGR_g3804 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D PAGR_g2346 nucleotidyl transferase/DNA polymerase DNA repair protein UmuC K03502 umuC; DNA polymerase V D PAGR_g3817 UV protection protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D PAGR_g2347 SOS-response transcriptional repressor UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D PAGR_g3090 putative prophage repressor protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D PAGR_g4019 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D PAGR_g3508 DNA polymerase II PolB K02336 polB; DNA polymerase II [EC:2.7.7.7] D PAGR_g2693 DNA-damage-inducible protein I DinI K12149 dinI; DNA-damage-inducible protein I D PAGR_g0654 putative DinI-like damage-inducible protein K12149 dinI; DNA-damage-inducible protein I D PAGR_g1002 regulatory protein RecX K03565 recX; regulatory protein D PAGR_g4135 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D PAGR_g2749 helicase IV HelD K03658 helD; DNA helicase IV [EC:5.6.2.4] D PAGR_g2900 ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D PAGR_g1960 ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D PAGR_g1044 ribonucleoside-diphosphate reductase 2 alpha subunit NrdE K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAGR_g1412 ribonucleoside-diphosphate reductase 1 alpha subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PAGR_g1411 ribonucleoside-diphosphate reductase 1 beta subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PAGR_g1043 ribonucleoside-diphosphate reductase 2 beta subunit NrdF K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:paq03029] D PAGR_g3721 translation initiation factor IF-2 InfB K02519 infB; translation initiation factor IF-2 D PAGR_g2412 translation initiation factor IF-3 InfC K02520 infC; translation initiation factor IF-3 D PAGR_g3405 elongation factor Tsf K02357 tsf; elongation factor Ts D PAGR_g4069 elongation factor Tu-A TufA K02358 tuf; elongation factor Tu D PAGR_g0406 elongation factor Tu-A TufA K02358 tuf; elongation factor Tu D PAGR_g0405 elongation factor G FusA K02355 fusA; elongation factor G D PAGR_g1133 GTP-binding protein Era K03595 era; GTPase D PAGR_g2335 tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PAGR_g3028 leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PAGR_g1890 aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PAGR_g1878 arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PAGR_g2552 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PAGR_g2172 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PAGR_g1604 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D PAGR_g3877 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PAGR_g4002 single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein D PAGR_g3398 outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family D PAGR_g3534 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PAGR_g1120 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D PAGR_g3776 60 kDa chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAGR_g3777 10 kDa chaperonin GroS K04078 groES; chaperonin GroES D PAGR_g3533 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D PAGR_g1158 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PAGR_g2378 monothiol glutaredoxin YdhD K07390 grxD; monothiol glutaredoxin D PAGR_g1497 putative ATPase Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning D PAGR_g3219 protoheme IX farnesyltransferase CyoE K02257 COX10; heme o synthase [EC:2.5.1.141] D PAGR_g4183 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAGR_g3175 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:paq02000] D PAGR_g2791 lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D PAGR_g3200 multidrug resistance ATP-binding protein MdlA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D PAGR_g3199 multidrug resistance ATP-binding protein MdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D PAGR_g0238 ABC transporter MsbA K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D PAGR_g1424 cyclolysin secretion/processing ATP-binding protein CyaB K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PAGR_g2810 cysteine ABC transporter permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D PAGR_g2809 cysteine ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D PAGR_g1431 ABC transporter ATP-binding protein YojI K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D PAGR_g1442 ABC transporter ATP binding component YddA K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D PAGR_g2762 ABC transporter ATP-binding protein Uup K15738 uup; ABC transport system ATP-binding/permease protein D PAGR_g1252 thiosulfate-binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D PAGR_g0165 sulfate-binding protein precursor Sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D PAGR_g1253 sulfate transport system permease protein CysU K02046 cysU; sulfate/thiosulfate transport system permease protein D PAGR_g1254 sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D PAGR_g1255 sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D PAGR_g2952 molybdate-binding periplasmic protein ModA K02020 modA; molybdate transport system substrate-binding protein D PAGR_g4044 molybdate ABC transporter periplasmic molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein D PAGR_g0033 molybdate-binding periplasmic protein precursor ModA K02020 modA; molybdate transport system substrate-binding protein D PAGR_g2951 molybdenum transport system permease ModB K02018 modB; molybdate transport system permease protein D PAGR_g2950 molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PAGR_g2955 molybdenum transport ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D PAGR_g2448 nitrate transport protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D PAGR_g2447 nitrate transport permease protein NrtB K15577 nrtB; nitrate/nitrite transport system permease protein D PAGR_g2446 nitrate transport protein NasD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D PAGR_g0388 taurine-binding periplasmic protein precursor TauA K15551 tauA; taurine transport system substrate-binding protein D PAGR_g0390 taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein D PAGR_g0389 taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D PAGR_g1796 aliphatic sulfonates-binding protein SsuA K15553 ssuA; sulfonate transport system substrate-binding protein D PAGR_g2770 alkanesulfonate transporter substrate-binding subunit SsuA K15553 ssuA; sulfonate transport system substrate-binding protein D PAGR_g2772 aliphatic sulfonate transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D PAGR_g2773 aliphatic sulfonate transport ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D PAGR_g3797 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PAGR_g0766 family 1 extracellular solute-binding protein PotD K02012 afuA; iron(III) transport system substrate-binding protein D PAGR_g0767 putative ABC transporter permease ModB K02011 afuB; iron(III) transport system permease protein D PAGR_g3796 iron ABC transporter transmembrane protein K02011 afuB; iron(III) transport system permease protein D PAGR_g0765 ferric cations import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PAGR_g3795 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PAGR_g3504 thiamine ABC transporter periplasmic-binding protein TbpA K02064 thiB; thiamine transport system substrate-binding protein D PAGR_g3505 thiamine transport system permease ThiP K02063 thiP; thiamine transport system permease protein D PAGR_g3506 thiamine transport ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D PAGR_g2833 putrescine-binding periplasmic protein PotF K11073 potF; putrescine transport system substrate-binding protein D PAGR_g2830 putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein D PAGR_g2831 putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein D PAGR_g2832 putrescine transporter ATP-binding subunit PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D PAGR_g1380 spermidine/putrescine-binding periplasmic protein 2 PotD-A K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D PAGR_g2179 ABC transporter binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D PAGR_g1203 family 1 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D PAGR_g0255 family 1 extracellular solute-binding protein PotD K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D PAGR_g0256 spermidine/putrescine transport system permease protein PotC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D PAGR_g1378 spermidine/putrescine transport system permease protein PotC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D PAGR_g1204 sulfate transport system permease protein CysT K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D PAGR_g1205 sulfate transport system permease protein CysW K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D PAGR_g1379 putrescine transport system permease protein PotH K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D PAGR_g0257 ABC transporter permease subunit PotH K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D PAGR_g1206 ferric cations import ATP-binding protein FbpC K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D PAGR_g1383 ferric cations import ATP-binding protein FbpC1 K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D PAGR_g0258 sulfate/thiosulfate import ATP-binding protein CysA2 K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D PAGR_g1040 glycine betaine-binding periplasmic protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D PAGR_g1041 glycine betaine/L-proline transport system permease proW K02001 proW; glycine betaine/proline transport system permease protein D PAGR_g1042 glycine betaine/L-proline transport ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D PAGR_g2133 glycine betaine ABC transporter substrate-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein D PAGR_g2907 transport system permease YehZ K05845 opuC; osmoprotectant transport system substrate-binding protein D PAGR_g2132 glycine betaine/carnitine/choline transport system permease OpuCB K05846 opuBD; osmoprotectant transport system permease protein D PAGR_g2134 nner membrane ABC transporter permease protein YehW K05846 opuBD; osmoprotectant transport system permease protein D PAGR_g2904 ABC transporter permease YehW K05846 opuBD; osmoprotectant transport system permease protein D PAGR_g2906 osmoprotectant uptake system permease YehY K05846 opuBD; osmoprotectant transport system permease protein D PAGR_g2131 choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D PAGR_g2905 ABC transporter YehX K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D PAGR_p157 taurine transport system periplasmic protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D PAGR_p156 taurine transport system permease TauC K02050 ABC.SN.P; NitT/TauT family transport system permease protein D PAGR_g3609 glycine betaine/L-proline transport system permease ProW K02050 ABC.SN.P; NitT/TauT family transport system permease protein D PAGR_p155 sulfate/thiosulfate import ATP-binding protein CysA K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D PAGR_g3608 nitrate transport ATP-binding protein NrtD K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D PAGR_g2196 maltose-binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D PAGR_g2197 maltose transport system permease MalF K10109 malF; maltose/maltodextrin transport system permease protein D PAGR_g2198 maltose transport system permease MalG K10110 malG; maltose/maltodextrin transport system permease protein D PAGR_g2195 maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PAGR_g3957 lactose transport ATP-binding protein LacK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PAGR_g3955 multiple sugar-binding protein MsmE K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D PAGR_g3954 sugar ABC transporter permease YurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D PAGR_g3953 sugar ABC transporter permease AraQ K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D PAGR_g2285 L-arabinose-binding periplasmic protein AraF K10537 araF; L-arabinose transport system substrate-binding protein D PAGR_g2283 L-arabinose transport system permease protein AraH K10538 araH; L-arabinose transport system permease protein D PAGR_g2284 L-arabinose transport ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D PAGR_g1488 periplasmic-binding protein/LacI transcriptional regulator MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D PAGR_g1490 galactoside transport system permease MglC K10541 mglC; methyl-galactoside transport system permease protein D PAGR_g1489 galactoside transport ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D PAGR_g0050 D-xylose transporter subunit XylF K10543 xylF; D-xylose transport system substrate-binding protein D PAGR_g0048 xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein D PAGR_g0049 D-xylose transport ATP-binding protein XylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D PAGR_g1646 D-ribose-binding protein precursor RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g3911 ribose ABC transporter, periplasmic ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g3671 D-ribose-binding periplasmic protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g2234 ribose-binding periplasmic protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g0085 D-ribose-binding periplasmic protein precursor RbsB K10439 rbsB; ribose transport system substrate-binding protein D PAGR_g1645 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D PAGR_g2232 ribose transport system permease RbsC K10440 rbsC; ribose transport system permease protein D PAGR_g3910 ribose transport system permease RbsC K10440 rbsC; ribose transport system permease protein D PAGR_g0084 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D PAGR_g3674 ribose transport system permease RbsC K10440 rbsC; ribose transport system permease protein D PAGR_g3673 ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAGR_g1644 ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAGR_g0083 ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAGR_g2233 ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAGR_g3909 ribose transport ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PAGR_g2321 ABC transporter periplasmic-binding protein YtfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein D PAGR_g2318 inner membrane ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein D PAGR_g2319 inner membrane ABC transporter permease YtfT K23509 ytfT; galactofuranose transport system permease protein D PAGR_g2320 ABC-type sugar transport system ATPase component YtfR K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D PAGR_g2440 D-ribose-binding periplasmic protein RbsB K17202 eryG; erythritol transport system substrate-binding protein D PAGR_g2437 ribose transport system permease protein RbsC K17203 eryF; erythritol transport system permease protein D PAGR_g2438 ribose transport ATP-binding protein RbsA K17204 eryE; erythritol transport system ATP-binding protein D PAGR_g1607 rhizopine-binding protein MocB K17213 K17213; inositol transport system substrate-binding protein D PAGR_g1609 ribose transport system permease RbsC K17214 K17214; inositol transport system permease protein D PAGR_g1608 galactoside transport ATP-binding protein MglA K17215 K17215; inositol transport system ATP-binding protein D PAGR_g1313 family 1 extracellular solute-binding protein MalE K17237 inoE; inositol-phosphate transport system substrate-binding protein D PAGR_g1314 sugar ABC transporter permease protein UgpA K17238 inoF; inositol-phosphate transport system permease protein D PAGR_g1315 inner membrane ABC transporter permease protein YcjP K17239 inoG; inositol-phosphate transport system permease protein D PAGR_g1316 lactose transport ATP-binding protein LacK K17240 inoK; inositol-phosphate transport system ATP-binding protein D PAGR_p180 glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D PAGR_g0319 glycerol-3-phosphate-binding periplasmic protein precursor UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D PAGR_p179 sugar ABC transporter permease YurN K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D PAGR_g0320 SN-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D PAGR_p178 L-arabinose transport system permease AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D PAGR_g0321 SN-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D PAGR_p181 maltose/maltodextrin import ATP-binding protein MalK K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D PAGR_g0322 SN-glycerol-3-phosphate transport ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D PAGR_g3743 toluene tolerance ABC transporter periplasmic subunit YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PAGR_g3744 toluene tolerance ABC transporter permease subunit YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PAGR_g3745 toluene tolerance ABC efflux transporter ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PAGR_g3742 toluene tolerance family protein YrbC K07323 mlaC; phospholipid transport system substrate-binding protein D PAGR_g3741 anti-sigma factor antagonist YrbB K07122 mlaB; phospholipid transport system transporter-binding protein D PAGR_g1237 LacI-type transcriptional regulator YneA K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D PAGR_g0043 LacI-type transcriptional regulator YneA K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D PAGR_g3319 putative sugar ABC transporter K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D PAGR_g3318 ribose transport system permease RbsC K02057 ABC.SS.P; simple sugar transport system permease protein D PAGR_g0040 ribose transport system permease protein RbsC K02057 ABC.SS.P; simple sugar transport system permease protein D PAGR_g0041 putative permease of ABC transporter K02057 ABC.SS.P; simple sugar transport system permease protein D PAGR_g1234 ribose transport system permease protein K02057 ABC.SS.P; simple sugar transport system permease protein D PAGR_g1235 ribose transport system permease protein RbsC K02057 ABC.SS.P; simple sugar transport system permease protein D PAGR_g3317 ribose transport ATP-binding protein RbsA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D PAGR_g0042 ribose transport ATP-binding protein RbsA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D PAGR_g1236 ribose transport ATP-binding protein RbsA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D PAGR_g3250 phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D PAGR_g0058 phosphate-binding periplasmic protein precursor PstS K02040 pstS; phosphate transport system substrate-binding protein D PAGR_g0057 phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D PAGR_g1192 phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D PAGR_g0056 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D PAGR_g1193 phosphate transport system permease protein PstA1 K02038 pstA; phosphate transport system permease protein D PAGR_g0055 phosphate ABC transporter ATPase subunit PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PAGR_g1194 phosphate import ATP-binding protein PstB1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PAGR_g1640 phosphonates-binding periplasmic protein precursor PhnD K02044 phnD; phosphonate transport system substrate-binding protein D PAGR_g1641 phosphite transport system permease PtxC K02042 phnE; phosphonate transport system permease protein D PAGR_g1642 phosphonates transport system permease PhnE K02042 phnE; phosphonate transport system permease protein D PAGR_g1639 phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D PAGR_g1551 lysine-arginine-ornithine-binding periplasmic protein precursor ArgT K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D PAGR_g1367 histidine transport system permease protein HisM K10015 hisM; histidine transport system permease protein D PAGR_g1366 histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein D PAGR_g1368 histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g1365 lysine-arginine-ornithine-binding periplasmic protein ArgT K10014 hisJ; histidine transport system substrate-binding protein D PAGR_g2877 glutamine-binding periplasmic protein GlnH K10036 glnH; glutamine transport system substrate-binding protein D PAGR_g2878 glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein D PAGR_g2879 glutamine transport ATP-binding protein glnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g2827 arginine-binding periplasmic protein 2 ArtJ K09996 artJ; arginine transport system substrate-binding protein D PAGR_g2824 arginine-binding periplasmic protein 1 ArtI K09997 artI; arginine transport system substrate-binding protein D PAGR_g2826 arginine transport system permease protein ArtM K09998 artM; arginine transport system permease protein D PAGR_g2825 arginine transport system permease protein ArtQ K09999 artQ; arginine transport system permease protein D PAGR_g2823 arginine transport ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g3023 glutamate/aspartate periplasmic-binding protein GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein D PAGR_g3025 glutamate/aspartate transport system permease GltK K10002 gltK; glutamate/aspartate transport system permease protein D PAGR_g3024 glutamate/aspartate transport system permease GltJ K10003 gltJ; glutamate/aspartate transport system permease protein D PAGR_g3026 glutamate/aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g2887 nopaline-binding periplasmic protein NocT K10018 occT; octopine/nopaline transport system substrate-binding protein D PAGR_g2885 octopine transport system permease OccM K10019 occM; octopine/nopaline transport system permease protein D PAGR_g2886 octopine transport system permease OccQ K10020 occQ; octopine/nopaline transport system permease protein D PAGR_g2884 histidine transport ATP-binding protein HisP K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g0455 putative amino-acid ABC transporter-binding protein YhdW K09969 aapJ; general L-amino acid transport system substrate-binding protein D PAGR_g0454 amino acid ABC transporter permease protein YhdX K09970 aapQ; general L-amino acid transport system permease protein D PAGR_g0453 inner membrane amino-acid ABC transporter permease protein YhdY K09971 aapM; general L-amino acid transport system permease protein D PAGR_g0452 amino-acid ABC transporter ATP-binding protein YhdZ K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g1777 cystine transporter subunit FliY K02424 tcyA; L-cystine transport system substrate-binding protein D PAGR_g1778 inner membrane amino-acid ABC transporter permease protein YecS K10009 tcyB; L-cystine transport system permease protein D PAGR_g1779 amino-acid ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g0314 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D PAGR_g0315 high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D PAGR_g0316 high-affinity branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D PAGR_g0317 high-affinity branched-chain amino acid transport system permease protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D PAGR_g0318 high-affinity branched-chain amino acid transport system permease protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D PAGR_p064 D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D PAGR_g3379 D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D PAGR_g3378 D-methionine transport system permease MetI K02072 metI; D-methionine transport system permease protein D PAGR_g3377 D-methionine transport ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D PAGR_g3554 aliphatic amidase expression-regulating protein AmiC K11959 urtA; urea transport system substrate-binding protein D PAGR_g3555 high-affinity branched-chain amino acid transport system permease BraD K11960 urtB; urea transport system permease protein D PAGR_g3556 high-affinity branched-chain amino acid transport system permease LivM K11961 urtC; urea transport system permease protein D PAGR_g3557 high-affinity branched-chain amino acid transport ATP-binding protein BraF K11962 urtD; urea transport system ATP-binding protein D PAGR_g3558 high-affinity branched-chain amino acid transport ATP-binding protein BraG K11963 urtE; urea transport system ATP-binding protein D PAGR_g2941 high-affinity branched-chain amino acid transport ATP-binding protein BraG K11963 urtE; urea transport system ATP-binding protein D PAGR_g0976 glutamine-binding protein precursor GlnH K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PAGR_g0216 general L-amino acid-binding periplasmic protein AapJ precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PAGR_p143 polar amino acid ABC transporter periplasmic ligand-binding protein ArtJ K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PAGR_g3340 cysteine ABC transporter periplasmic substrate binding protein FliY K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PAGR_g0762 cystine-binding periplasmic protein FliY K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PAGR_g0758 cystine-binding periplasmic protein FliY K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PAGR_g2224 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PAGR_g3355 cystine-binding periplasmic protein FliY K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PAGR_g0974 inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein D PAGR_g0760 inner membrane amino-acid ABC transporter permease YecS K02029 ABC.PA.P; polar amino acid transport system permease protein D PAGR_g3338 amino acid ABC transporter permease YhdY K02029 ABC.PA.P; polar amino acid transport system permease protein D PAGR_g3339 amino-acid ABC transporter permease YckJ K02029 ABC.PA.P; polar amino acid transport system permease protein D PAGR_p144 polar amino acid ABC transporter permease YckA K02029 ABC.PA.P; polar amino acid transport system permease protein D PAGR_g0975 amino-acid ABC transporter permease protein YckJ K02029 ABC.PA.P; polar amino acid transport system permease protein D PAGR_g3353 glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g2225 Glutamine ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D PAGR_g0973 glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g2226 Glutamine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g0761 glutamate transport ATP-binding protein GluA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g3337 glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D PAGR_p145 polar amino acid ABC transporter ATP-binding protein YqiZ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D PAGR_g2089 periplasmic murein peptide-binding protein MppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2006 periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2007 periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D PAGR_g2008 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D PAGR_g2009 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D PAGR_g2010 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D PAGR_g2011 oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D PAGR_g4155 dipeptide transport system periplasmic protein DppA K12368 dppA; dipeptide transport system substrate-binding protein D PAGR_g2121 eriplasmic dipeptide transport protein DppA K12368 dppA; dipeptide transport system substrate-binding protein D PAGR_g4154 dipeptide transport system permease DppB K12369 dppB; dipeptide transport system permease protein D PAGR_g4153 dipeptide transport system permease DppC K12370 dppC; dipeptide transport system permease protein D PAGR_g4152 dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein D PAGR_g4151 dipeptide transport ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein D PAGR_g2076 peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D PAGR_g2075 peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein D PAGR_g2074 peptide transport system permease protein SapC K19228 sapC; cationic peptide transport system permease protein D PAGR_g2073 peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein D PAGR_g2072 peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein D PAGR_g2861 family 5 extracellular solute-binding protein YliB K13889 gsiB; glutathione transport system substrate-binding protein D PAGR_p130 ABC transportter periplasmic substrate-binding protein YliB K13889 gsiB; glutathione transport system substrate-binding protein D PAGR_g2860 inner membrane ABC transporter permease YliC K13890 gsiC; glutathione transport system permease protein D PAGR_p131 ABC transporter permease YliC K13890 gsiC; glutathione transport system permease protein D PAGR_g2859 oligopeptide ABC transporter permease YliD K13891 gsiD; glutathione transport system permease protein D PAGR_p132 ABC transporter permease YliD K13891 gsiD; glutathione transport system permease protein D PAGR_g2862 putative ABC transporter ATP-binding protein YliA K13892 gsiA; glutathione transport system ATP-binding protein D PAGR_p129 ABC transporter ATP-binding protein YliA K13892 gsiA; glutathione transport system ATP-binding protein D PAGR_p249 nickel-binding periplasmic protein NikA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PAGR_g0276 putative ABC transporter periplasmic-binding protein YddS K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PAGR_g3663 putative ABC transporter periplasmic-binding protein YddS K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PAGR_g1616 family 5 extracellular solute-binding protein YliB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PAGR_g1057 dipeptide ABC transport periplasmic binding protein Dpp K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PAGR_g0275 inner membrane ABC transporter permease protein YddR K02033 ABC.PE.P; peptide/nickel transport system permease protein D PAGR_g1617 peptide ABC transporter permease protein YliC K02033 ABC.PE.P; peptide/nickel transport system permease protein D PAGR_g1056 inner membrane ABC transporter permease YddR K02033 ABC.PE.P; peptide/nickel transport system permease protein D PAGR_p248 nickel transport system permease NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein D PAGR_p247 dipeptide transport system permease DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PAGR_g0274 inner membrane ABC transporter permease protein YddQ K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PAGR_g1618 dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PAGR_g1055 inner membrane ABC transporter permease YddQ K02034 ABC.PE.P1; peptide/nickel transport system permease protein D PAGR_g0273 oligopeptide ABC transporter YddP K02031 ddpD; peptide/nickel transport system ATP-binding protein D PAGR_p246 putative ABC transporter ATP-binding protein YejF K02031 ddpD; peptide/nickel transport system ATP-binding protein D PAGR_g1619 ABC transporter ATP-binding protein YliA K02031 ddpD; peptide/nickel transport system ATP-binding protein D PAGR_g1054 dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D PAGR_g0272 oligopeptide ABC transporter YddO K02032 ddpF; peptide/nickel transport system ATP-binding protein D PAGR_g1053 oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D PAGR_g1459 ABC-type dipeptide transport system periplasmic component YejA K13893 yejA; microcin C transport system substrate-binding protein D PAGR_g1458 inner membrane ABC transporter permease protein YejB K13894 yejB; microcin C transport system permease protein D PAGR_g1457 inner membrane ABC transporter permease protein YejE K13895 yejE; microcin C transport system permease protein D PAGR_g1456 ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein D PAGR_g3421 ferrichrome-binding periplasmic protein FhuD K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D PAGR_g3420 ferrichrome transport system permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D PAGR_g3422 ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D PAGR_g1092 ferric anguibactin-binding protein FatB K25282 yclQ; iron-siderophore transport system substrate-binding protein D PAGR_g1090 ferric anguibactin transport system permease protein FatC K25283 yclO; iron-siderophore transport system permease protein D PAGR_g1091 ferric anguibactin transport system permease protein FatD K25284 yclN; iron-siderophore transport system permease protein D PAGR_g1089 putative iron ABC transporter, ATP-binding protein FecE K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D PAGR_p022 Fe3+-hydroxamate ABC transporter periplasmic protein YadT K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PAGR_g1706 iron transport lipoprotein YadT K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PAGR_g1064 iron complex transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PAGR_g3052 ABC transporter substrate-binding protein FecB K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PAGR_g4045 putative ferrichrome-binding periplasmic protein FecB K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PAGR_g1707 putative ABC transporter permease FecD K02015 ABC.FEV.P; iron complex transport system permease protein D PAGR_g1063 ferrichrome transport system permease protein FhuB K02015 ABC.FEV.P; iron complex transport system permease protein D PAGR_g1479 putative ABC transporter permease BtuC K02015 ABC.FEV.P; iron complex transport system permease protein D PAGR_g1480 ferric enterobactin transport ATP-binding protein FepC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PAGR_g1705 ferric enterobactin transport ATP-binding protein FepC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PAGR_g1062 iron(III) dicitrate transport ATP-binding protein FecE K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PAGR_g3416 vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D PAGR_g2406 vitamin B12 import system permease BtuC K06073 btuC; vitamin B12 transport system permease protein D PAGR_g2404 vitamin B12 import ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D PAGR_g1898 high-affinity zinc uptake system protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D PAGR_g1896 high-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein D PAGR_g1897 high-affinity zinc uptake system ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PAGR_p013 periplasmic iron-binding protein YfeA K11604 sitA; manganese/iron transport system substrate-binding protein D PAGR_p015 chelated iron transport system membrane protein YfeC K11605 sitC; manganese/iron transport system permease protein D PAGR_p016 chelated iron transport system membrane protein YfeD K11606 sitD; manganese/iron transport system permease protein D PAGR_p014 chelated iron transport system membrane protein YfeB K11607 sitB; manganese/iron transport system ATP-binding protein D PAGR_g3188 Metal ABC transporter substrate-binding protein MntA K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D PAGR_g3189 Metal ABC transport system permease MntC K02075 ABC.ZM.P; zinc/manganese transport system permease protein D PAGR_g3190 Metal ABC transport system ATP-binding protein MntB K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D PAGR_g3680 putative permease YjgP K07091 lptF; lipopolysaccharide export system permease protein D PAGR_g3679 putative permease YjgQ K11720 lptG; lipopolysaccharide export system permease protein D PAGR_g3751 LPS export porin complex cytoplasmic ABC-type ATPase subunit YhbG K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D PAGR_g2639 lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein D PAGR_g2641 lipoprotein-releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein D PAGR_g2640 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D PAGR_g1324 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D PAGR_g1323 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D PAGR_g1322 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D PAGR_g1321 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D PAGR_g0311 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D PAGR_g0310 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D PAGR_g3435 ABC-2 type transporter YadH K01992 ABC-2.P; ABC-2 type transport system permease protein D PAGR_g3436 ABC-type multidrug transport system ATPase component YadG K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PAGR_g3157 ABC transporter permease YbbP K02004 ABC.CD.P; putative ABC transport system permease protein D PAGR_g3158 ABC transporter ATP-binding protein YbbA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PAGR_g2392 Iron-sulfur cluster biosynthesis protein sufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D PAGR_g1268 cytochrome oxidase YfeH K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PAGR_g2385 multidrug resistance protein MdtK K26939 norM; MATE family, multidrug efflux pump D PAGR_g4018 DNA-damage-inducible protein F DinF K26937 dinF; MATE family, multidrug efflux pump D PAGR_g1654 MATE efflux family protein YeeO K26937 dinF; MATE family, multidrug efflux pump D PAGR_g0871 galactose-proton symporter GalP K08137 galP; MFS transporter, SP family, galactose:H+ symporter D PAGR_g3067 arabinose-proton symporter AraE K02100 araE; MFS transporter, SP family, arabinose:H+ symporter D PAGR_g2505 D-xylose-proton symporter XylE K08138 xylE; MFS transporter, SP family, xylose:H+ symportor D PAGR_g3944 lactose permease LacY K02532 lacY; MFS transporter, OHS family, lactose permease D PAGR_g3565 L-fucose-proton symporter FucP K02429 fucP; MFS transporter, FHS family, L-fucose permease D PAGR_g3502 sugar efflux transporter A SetA K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D PAGR_g0031 citrate-proton symporter CitH K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter D PAGR_g1028 alpha-ketoglutarate permease KgtP K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D PAGR_p214 proline/betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D PAGR_g0285 proline/betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D PAGR_g2607 proline/betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D PAGR_g3536 proline/betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D PAGR_g3592 inner membrane metabolite transport protein YdfJ K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D PAGR_g3603 nner membrane metabolite transport protein YdfJ K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D PAGR_g1294 major facilitator superfamily YhjX K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D PAGR_g3589 carboxylic acid transporter protein Jen1 K08178 JEN; MFS transporter, SHS family, lactate transporter D PAGR_g0949 D-galactonate transporter GudP K03535 gudP; MFS transporter, ACS family, glucarate transporter D PAGR_g2895 glucarate transporter GudP K03535 gudP; MFS transporter, ACS family, glucarate transporter D PAGR_g0576 hexuronate transporter ExuT K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D PAGR_g0770 hexuronate transporter ExuT K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D PAGR_g3631 hexuronate transporter ExuT K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D PAGR_g1083 putative tartrate transporter TtuB K13021 ttuB; MFS transporter, ACS family, tartrate transporter D PAGR_g1084 putative tartrate transporter TtuB K13021 ttuB; MFS transporter, ACS family, tartrate transporter D PAGR_g3501 D-galactonate transporter DgoT K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D PAGR_g0232 inner membrane transport protein YjjL K23016 lgoT; MFS transporter, ACS family, L-galactonate transporter D PAGR_g2115 4-hydroxybenzoate transporter PcaK K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D PAGR_g0738 4-hydroxybenzoate transporter PcaK K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D PAGR_g3498 MFS superfamily transporter YdiM K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter D PAGR_g3283 cyanate transport protein CynX K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D PAGR_g1150 3-phenylpropionic acid transporter HcaT K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D PAGR_g4096 glycerol-3-phosphate transporter GlpT K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D PAGR_g3694 MFS family transporter YgeD K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D PAGR_g3214 muropeptide transporter AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D PAGR_g1454 bicyclomycin resistance protein Bcr K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D PAGR_g2423 Bcr/CflA family drug resistance transporter Bcr K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D PAGR_g1976 chloramphenicol resistance protein CmlA K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D PAGR_g0172 multidrug resistance protein D EmrD K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D PAGR_g2124 sugar efflux transporter SotB K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D PAGR_g1901 Chloramphenicol resistance pump Cmr K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D PAGR_g3560 multidrug translocase Cmr K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D PAGR_g3963 multidrug resistance protein MdtG K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D PAGR_g0911 major facilitator superfamily protein YdhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D PAGR_g1288 multidrug resistance protein B EmrB K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D PAGR_g2869 multidrug resistance protein B EmrB K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D PAGR_g1036 Multidrug resistance transport protein EmrB K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D PAGR_g2702 methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D PAGR_g1940 drug resistance EmrB/QacA family transporter YebQ K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D PAGR_g1511 Arabinose efflux permease YegB K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D PAGR_g2187 fosmidomycin resistance protein Fsr K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D PAGR_g2127 major facilitator superfamily protein YnfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D PAGR_g2802 MFS-type transporter protein YcaD K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein D PAGR_g0374 Putative MFS family transporterTsgA K06141 tsgA; MFS transporter, TsgA protein D PAGR_g1466 major facilitator family transporter YyaJ K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D PAGR_g3971 major facilitator family transporter YyaJ K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D PAGR_g1260 phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D PAGR_g0919 phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D PAGR_g1261 phosphocarrier protein PtsH K02784 ptsH; phosphocarrier protein HPr D PAGR_g3756 phosphotransferase system, phosphocarrier protein PtsO K08485 ptsO; phosphocarrier protein NPr D PAGR_g1470 multiphosphoryl transfer protein FruB K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D PAGR_g1259 glucose-specific phosphotransferase enzyme IIA component Crr K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PAGR_g2655 PTS system glucose-specific EIICB component PtsG K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D PAGR_g0741 PTS system glucose-specific EIICBA component PtsG K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D PAGR_g3011 PTS system N-acetylglucosamine-specific EIICBA component NagE K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D PAGR_g2057 PTS system maltose- and glucose-specific EIICB component MalX K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D PAGR_g3942 PTS system sucrose-specific EIIBC component ScrA K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D PAGR_g2576 PTS system beta-glucoside-specific EIIBCA component BglF K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D PAGR_p035 PTS system beta-glucoside-specific transporter subunit IIABC AscF K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D PAGR_g3980 PTS system sucrose-specific EIIBC component ScrA K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D PAGR_g1916 PTS system alpha-glucoside-specific EIICB component AglA K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D PAGR_g1697 Multiphosphoryl transfer protein FryA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D PAGR_g0610 heat-responsive suppressor HrsA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D PAGR_g0718 fructose-like phosphotransferase enzyme IIA component FrvA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D PAGR_g1699 PTS system fructose-specific EIIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g0716 PTS system fructose-specific EIIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g1472 PTS system fructose-specific EIIBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g0611 PTS system fructose-specific EIIBBC component FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D PAGR_g1698 fructose-like phosphotransferase enzyme IIB component 2 FrwB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D PAGR_g0717 fructose-like phosphotransferase enzyme IIB component 2 FrwB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D PAGR_g4164 PTS system mannitol-specific EIICBA component MtlA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D PAGR_g3274 Pts system, cellobiose-specific IIa component ChbA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAGR_g2528 PTS system, lactose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAGR_g0029 N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component ChbA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PAGR_g3276 cellobiose-specific phosphotransferase enzyme IIB component CelA K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAGR_g2527 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAGR_g0026 cellobiose-specific phosphotransferase enzyme IIB component CelA K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PAGR_g3275 Lichenan permease IIC component LicC K02761 celB; cellobiose PTS system EIIC component D PAGR_g2526 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D PAGR_g0027 cellobiose permease IIC component CelB K02761 celB; cellobiose PTS system EIIC component D PAGR_g3363 glucitol/sorbitol-specific phosphotransferase IIA component SrlB K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D PAGR_g3362 glucitol/sorbitol-specific phosphotransferase IIB component SrlE K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D PAGR_g3361 glucitol/sorbitol permease IIC component SrlA K02783 srlA; glucitol/sorbitol PTS system EIIC component D PAGR_g1950 PTS system mannose-specific EIIAB component ManX K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D PAGR_g1949 mannose permease IIC component ManY K02795 manY; mannose PTS system EIIC component D PAGR_g1948 mannose permease IID component ManZ K02796 manZ; mannose PTS system EIID component D PAGR_g0857 putative phosphotransferase IIA component SgcA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PAGR_g2242 PTS IIA-like nitrogen-regulatory protein PtsN K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D PAGR_g0856 PEP-dependent phosphotransferase system subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D PAGR_g2246 sugar phosphotransferase component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D PAGR_g0855 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component D PAGR_g2245 putative sugar-specific permease SgaT/UlaA K03475 ulaA; ascorbate PTS system EIIC component D PAGR_g3754 nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D PAGR_g3296 PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D PAGR_g1877 aquaporin Z AqpZ K06188 aqpZ; aquaporin Z D PAGR_g0174 glycerol uptake facilitator protein GlpF K02440 glpF; glycerol uptake facilitator D PAGR_g3197 ammonia channel precursor AmtB K03320 amt; ammonium transporter, Amt family D PAGR_g2333 glutathione S-transferase Gst K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAGR_g3992 glutathione S-transferase III Gst3 K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAGR_g0224 glutathione S-transferase YliJ K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAGR_g1374 glutathione S-transferase YfcF K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PAGR_g3762 stringent starvation protein A SspA K03599 sspA; stringent starvation protein A D PAGR_g2741 putative TEGT family carrier/transport protein YccA K19416 yccA; modulator of FtsH protease D PAGR_g2799 formate/nitrite transporter FocA K06212 focA; formate transporter D PAGR_g1273 formate transporter YrhG K21993 fdhC; formate transporter D PAGR_g0439 large-conductance mechanosensitive channel MscL K03282 mscL; large conductance mechanosensitive channel D PAGR_g2913 mechanosensitive Ion channel family protein YjeP K05802 mscK; potassium-dependent mechanosensitive channel D PAGR_g0486 MscS mechanosensitive ion channel YjeP K22051 mscM; miniconductance mechanosensitive channel D PAGR_g0881 small-conductance mechanosensitive channel MscS K03442 mscS; small conductance mechanosensitive channel D PAGR_g1433 MscS family transporter YbdG K16053 ybdG; miniconductance mechanosensitive channel D PAGR_g2497 putative magnesium transporter K06213 mgtE; magnesium transporter D PAGR_g1187 magnesium transporter K06213 mgtE; magnesium transporter D PAGR_g1864 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D PAGR_g1865 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PAGR_g1437 biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB D PAGR_g0742 TonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB D PAGR_g0743 TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D PAGR_g1436 biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D PAGR_g2975 colicin uptake protein TolQ K03562 tolQ; biopolymer transport protein TolQ D PAGR_g2974 colicin uptake protein TolR K03560 tolR; biopolymer transport protein TolR D PAGR_g4108 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D PAGR_g2090 Zinc transport protein YdaN K16074 zntB; zinc transporter D PAGR_g2920 Mg2 transporter protein CorA family protein YdaN K16074 zntB; zinc transporter D PAGR_g3812 camphor resistance CrcB family protein K06199 crcB; fluoride exporter D PAGR_g0236 Camphor resistance CrcB protein K06199 crcB; fluoride exporter D PAGR_g0520 putative transporter YtfL K03699 tlyC; magnesium and cobalt exporter, CNNM family D PAGR_g1009 HlyC/CorC family transporter YfjD K03699 tlyC; magnesium and cobalt exporter, CNNM family D PAGR_g2434 outer membrane protein F OmpF K09476 ompF; outer membrane pore protein F D PAGR_g0253 OmpF K09476 ompF; outer membrane pore protein F D PAGR_g2777 outer membrane protein F OmpF K09476 ompF; outer membrane pore protein F D PAGR_g3310 porin PhoE K11929 phoE; outer membrane pore protein E D PAGR_g1426 outer membrane protein C OmpC K09475 ompC; outer membrane pore protein C D PAGR_g1071 outer membrane protein C OmpC K09475 ompC; outer membrane pore protein C D PAGR_g0030 maltoporin precursor LamB K02024 lamB; maltoporin D PAGR_g2194 maltoporin LamB K02024 lamB; maltoporin D PAGR_g3943 sucrose porin ScrY K16077 scrY; sucrose porin D PAGR_g2754 outer membrane protein A OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family D PAGR_g2874 virulence-related outer membrane protein OmpX K11934 ompX; outer membrane protein X D PAGR_g1331 long-chain fatty acid transport protein FadL K06076 fadL; long-chain fatty acid transport protein D PAGR_g3968 nucleoside-specific channel-forming protein Tsx K05517 tsx; nucleoside-specific channel-forming protein D PAGR_g3573 outer membrane usher protein HtrE K07347 fimD; outer membrane usher protein D PAGR_g2623 outer membrane usher protein HifC K07347 fimD; outer membrane usher protein D PAGR_g0746 outer membrane usher protein FimD K07347 fimD; outer membrane usher protein D PAGR_g3070 putative adhesin autotransporter YdeU K12678 aidA-I; autotransporter family porin D PAGR_p025 lipase 1 Lip-1 K12686 apeE; outer membrane lipase/esterase D PAGR_g0199 vitamin B12 transporter BtuB precursor BtuB K16092 btuB; vitamin B12 transporter D PAGR_p049 TonB-dependent siderophore receptor FhuE K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D PAGR_g1093 colicin I receptor CirA K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D PAGR_g3423 ferrichrome outer membrane transporter FhuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PAGR_g3923 ferric aerobactin receptor IutA K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PAGR_g1441 TonB-dependent siderophore receptor PupA K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PAGR_g2556 ferrichrome-iron receptor FhuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PAGR_g3559 ferrioxamine receptor FoxA K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PAGR_p023 TonB-dependent siderophore receptor FoxA K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PAGR_g2259 TonB-dependent siderophore receptor YncD K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PAGR_g0705 outer membrane protein TolC K12340 tolC; outer membrane protein D PAGR_g1423 type I secretion protein CyaE K12543 lapE; outer membrane protein, adhesin transport system D PAGR_g2615 outer membrane protein OprM K18139 oprM; outer membrane protein, multidrug efflux system D PAGR_g2713 efflux pump outer membrane protein OprM K18139 oprM; outer membrane protein, multidrug efflux system D PAGR_g2868 Nodulation protein T NodT K18904 nodT; outer membrane protein, multidrug efflux system D PAGR_g1524 amylovoran export outer membrane protein AmsH K01991 wza; polysaccharide biosynthesis/export protein D PAGR_g3904 carbohydrate-selective porin OprB K07267 oprB; porin D PAGR_g4038 membrane-associated protein UidC K16140 uidC; putative glucuronide porin D PAGR_g2525 Glucuronide transport facilitator UidC K16140 uidC; putative glucuronide porin D PAGR_g3398 outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family D PAGR_g1171 outer membrane protein YfgL K17713 bamB; outer membrane protein assembly factor BamB D PAGR_g1217 NlpBDapX family lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D PAGR_g1022 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD D PAGR_g1117 SmpA/OmlA domain-containing protein K06186 bamE; outer membrane protein assembly factor BamE D PAGR_g0521 OMP85 family outer membrane protein YtfM K07278 tamA; translocation and assembly module TamA D PAGR_g0522 periplasmic protein YtfN K09800 tamB; translocation and assembly module TamB D PAGR_g3750 LPS export porin complex periplasmic chaparone LptA K09774 lptA; lipopolysaccharide export system protein LptA D PAGR_g3749 LPS export porin complex LptC subunit YrbK K11719 lptC; lipopolysaccharide export system protein LptC D PAGR_g3512 organic solvent tolerance protein Imp K04744 lptD; LPS-assembly protein D PAGR_g3029 LPS-assembly lipoprotein RlpB K03643 lptE; LPS-assembly lipoprotein D PAGR_g4146 cellulose synthase operon protein C BscS K20543 bcsC; cellulose synthase operon protein C D PAGR_g3021 magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein D PAGR_g3988 holin-like protein CidA K06518 cidA; holin-like protein D PAGR_g1495 putative effector of murein hydrolase LrgA K06518 cidA; holin-like protein D PAGR_g0849 melibiose carrier protein MelB K11104 melB; melibiose permease D PAGR_g4037 oligogalacturonide transporter UidB K16210 togT; oligogalacturonide transporter D PAGR_g1478 lysine-specific permease LysP K11733 lysP; lysine-specific permease D PAGR_g3457 aromatic amino acid transport protein AroP K11734 aroP; aromatic amino acid transport protein AroP D PAGR_g3247 proline-specific permease ProY K11736 proY; proline-specific permease ProY D PAGR_g2733 D-serine/D-alanine/glycine transporter CycA K11737 cycA; D-serine/D-alanine/glycine transporter D PAGR_g1229 L-asparagine permease AnsP K11738 ansP; L-asparagine permease D PAGR_g1049 S-methylmethionine permease MmuP K16235 mmuP; S-methylmethionine transporter D PAGR_g2107 arginine/ornithine antiporter YdgI K03758 arcD; arginine:ornithine antiporter / lysine permease D PAGR_g3617 amino acid permease MmuP K16238 eat; ethanolamine permease D PAGR_g2964 zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein D PAGR_g0163 ferrous-iron efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF D PAGR_g3185 acriflavine resistance protein B AcrB K18138 acrB; multidrug efflux pump D PAGR_g2614 acriflavine resistance protein B AcrB K18138 acrB; multidrug efflux pump D PAGR_g1225 aminoglycoside efflux pump AcrD K18324 acrD; multidrug efflux pump D PAGR_g1069 acriflavine resistance protein B AcrB K18146 adeB; multidrug efflux pump D PAGR_g2272 multidrug resistance protein MexB K19585 oqxB; multidrug efflux pump D PAGR_g3698 multidrug resistance protein MdtB K07788 mdtB; multidrug efflux pump D PAGR_g1513 multidrug resistance protein MdtB K07788 mdtB; multidrug efflux pump D PAGR_g3697 multidrug resistance protein MdtC K07789 mdtC; multidrug efflux pump D PAGR_g1512 multidrug resistance protein MdtC K07789 mdtC; multidrug efflux pump D PAGR_g1925 multidrug resistance protein MdtI K11742 mdtI; spermidine export protein MdtI D PAGR_g1926 multidrug resistance protein MdtJ K11743 mdtJ; spermidine export protein MdtJ D PAGR_g0810 amino acid metabolite efflux pump EamA K15268 eamA; O-acetylserine/cysteine efflux transporter D PAGR_g0011 DME family transporter ydeD K15268 eamA; O-acetylserine/cysteine efflux transporter D PAGR_g2585 amino acid metabolite efflux pump EamA K15268 eamA; O-acetylserine/cysteine efflux transporter D PAGR_p183 drug/metabolite transporter superfamily protein YwfM K03298 TC.DME; drug/metabolite transporter, DME family D PAGR_g2875 DME family transporter YbiF K11939 rhtA; inner membrane transporter RhtA D PAGR_g1588 L-rhamnose-proton symporter RhaT K02856 rhaT; L-rhamnose-H+ transport protein D PAGR_g4106 DMT superfamily transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D PAGR_p102 integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D PAGR_p096 small multidrug resistance protein YfbW K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D PAGR_g2138 membrane protein YnfA K09771 TC.SMR3; small multidrug resistance family-3 protein D PAGR_g3048 high-affinity gluconate transporter GntT K06155 gntT; Gnt-I system high-affinity gluconate transporter D PAGR_g0330 low-affinity gluconate transporter GntU K06156 gntU; Gnt-I system low-affinity gluconate transporter D PAGR_g1575 gluconate transporter YgbN K03299 TC.GNTP; gluconate:H+ symporter, GntP family D PAGR_g3448 2-keto-3-deoxygluconate permease 1 KdgT1 K02526 kdgT; 2-keto-3-deoxygluconate permease D PAGR_g1469 anaerobic C4-dicarboxylate transporter DcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D PAGR_g3780 anaerobic C4-dicarboxylate transporter DcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D PAGR_g3282 L-lactate permease LldP K00427 lldP; L-lactate permease D PAGR_g1930 high-affinity choline transport protein BetT K02168 betT; choline/glycine/proline betaine transport protein D PAGR_g2460 calcium/proton antiporter ChaA K07300 chaA; Ca2+:H+ antiporter D PAGR_g3746 putative cation/proton exchanger YrbG K07301 yrbG; cation:H+ antiporter D PAGR_g0269 low-affinity inorganic phosphate transporter 1 PitA K16322 pit; low-affinity inorganic phosphate transporter D PAGR_g0459 sodium/pantothenate symporter PanF K14392 panF; sodium/pantothenate symporter D PAGR_g1785 sodium/proline symporter PutP K11928 putP; sodium/proline symporter D PAGR_g3985 cation/acetate symporter ActP K14393 actP; cation/acetate symporter D PAGR_g3982 proton glutamate symport protein GltP K11102 gltP; proton glutamate symport protein D PAGR_g4142 aerobic C4-dicarboxylate transport protein DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D PAGR_g3532 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D PAGR_g3990 putative sodium/hydrogen exchanger YjcE K24163 nhaK; monovalent cation/hydrogen antiporter D PAGR_g0250 sodium/hydrogen exchanger Sod22 K24160 NHA1; sodium/hydrogen antiporter D PAGR_g1979 cell volume regulation protein A CvrA K11105 cvrA; potassium/hydrogen antiporter D PAGR_g0394 glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D PAGR_g0393 glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D PAGR_g3172 potassium efflux system protein YbaL K26735 KEA4_5_6; K+:H+ antiporter D PAGR_g4074 Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein D PAGR_g0441 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D PAGR_g1627 cytosine permease CodB K10974 codB; cytosine permease D PAGR_g1198 uracil permease UraA K02824 uraA; uracil permease D PAGR_p126 pyrimidine utilization transport protein G YcdG K09016 rutG; putative pyrimidine permease RutG D PAGR_g0107 putative purine permease YicE K16345 xanP; xanthine permease XanP D PAGR_g0291 putative purine permease YicE K16345 xanP; xanthine permease XanP D PAGR_g3991 xanthine/uracil/vitamin C permease YjcD K06901 pbuG; adenine/guanine/hypoxanthine permease D PAGR_g4179 xanthine/uracil/vitamin C permease YieG K06901 pbuG; adenine/guanine/hypoxanthine permease D PAGR_g1651 Xanthine/uracil/vitamin C permease YieG K06901 pbuG; adenine/guanine/hypoxanthine permease D PAGR_g1275 nucleoside permease NupC K11535 nupC; nucleoside transport protein D PAGR_g4161 low affinity tryptophan permease TnaB K03836 tnaB; low affinity tryptophan permease D PAGR_p074 tyrosine permease TutB K03318 tutB; tyrosine permease D PAGR_g3053 serine transporter SdaC K03837 sdaC; serine transporter D PAGR_g0563 threonine/serine transporter TdcC K03838 tdcC; threonine transporter D PAGR_g2264 benzoate membrane transport protein YdcO K05782 benE; benzoate membrane transport protein D PAGR_p205 putative tartrate carrier YgjE K11106 ttdT; L-tartrate/succinate antiporter D PAGR_p218 chloride channel protein ClcA K03281 clcA; chloride channel protein, CIC family D PAGR_g0583 ClC family transporter YnfJ K03281 clcA; chloride channel protein, CIC family D PAGR_g0608 putative sulfate transporter YbaR K03321 TC.SULP; sulfate permease, SulP family D PAGR_g2720 putative sulfate transporter YbaR K03321 TC.SULP; sulfate permease, SulP family D PAGR_g1276 manganese transport protein MntH K03322 mntH; manganese transport protein D PAGR_g4026 Na/Pi-cotransporter family protein YjbB K03324 yjbB; phosphate:Na+ symporter D PAGR_g2538 arsenical pump membrane protein ArsB K03893 arsB; arsenical pump membrane protein D PAGR_g2212 arsenical pump membrane protein ArsB K03893 arsB; arsenical pump membrane protein D PAGR_g4123 lipopolysaccharide biosynthesis protein WzxE K16693 wzxE; enterobacterial common antigen flippase D PAGR_g1534 extracellular polysaccharide biosynthesis protein AmsL K16696 amsL; exopolysaccharide (amylovoran) exporter D PAGR_g2687 virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase D PAGR_g1501 Auxin Efflux Carrier YwkB K13936 mdcF; malonate transporter and related proteins D PAGR_g0078 low affinity potassium transport system protein Kup K03549 kup; KUP system potassium uptake protein D PAGR_g2159 low affinity potassium transport system protein Kup K03549 kup; KUP system potassium uptake protein D PAGR_g0882 L-lysine exporter ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO D PAGR_g4099 homoserine/homoserine lactone efflux protein RhtB K05834 rhtB; homoserine/homoserine lactone efflux protein D PAGR_g4100 threonine efflux protein RhtC K05835 rhtC; threonine efflux protein D PAGR_p186 threonine efflux protein RhtC K05835 rhtC; threonine efflux protein D PAGR_g3632 lysine exporter family protein YahN K05835 rhtC; threonine efflux protein D PAGR_p244 branched-chain amino acid transport protein AzlC K26605 azlC; branched chain amino acid efflux pump D PAGR_p243 branched-chain amino acid transport protein AzlD K26606 azlD; branched chain amino acid efflux pump D PAGR_g1349 tricarboxylate transport protein TctA K07793 tctA; putative tricarboxylic transport membrane protein D PAGR_g1350 tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein D PAGR_g1351 tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein D PAGR_g0477 p-hydroxybenzoic acid efflux pump subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB D PAGR_g1213 putative permease PerM K03548 perM; putative permease D PAGR_g0302 inner membrane protein YhhQ K09125 yhhQ; queuosine precursor transporter D PAGR_g0566 Nodulin 21-like protein K22736 VIT; vacuolar iron transporter family protein D PAGR_g3662 multiple antibiotic resistance protein MarC K05595 marC; multiple antibiotic resistance protein D PAGR_g3480 cell division protein FtsW K03588 ftsW; cell division protein FtsW D PAGR_g0228 putative YebN family transporter YebN K23242 mntP; manganese efflux pump family protein D PAGR_g1786 iron permease FTR1 family YcdN K07243 FTR; high-affinity iron transporter D PAGR_g1787 ferrous iron transport binding protein YcdO K07224 efeO; iron uptake system component EfeO D PAGR_g1788 iron-dependent peroxidase YcdB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D PAGR_g1153 high-affinity nickel-transporter YohM K08970 rcnA; nickel/cobalt transporter (NicO) family protein D PAGR_g1438 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D PAGR_g2017 outer membrane receptor-mediated transport energizer protein TonB K03832 tonB; periplasmic protein TonB D PAGR_g2971 peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D PAGR_g2973 cell envelope integrity inner membrane protein TolA K03646 tolA; colicin import membrane protein D PAGR_g2972 Tol-Pal system beta propeller repeat-containing protein TolB K03641 tolB; TolB protein D PAGR_g3701 biotin sulfoxide reductase BisC K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D PAGR_g2870 multidrug resistance protein A EmrA K03543 emrA; membrane fusion protein, multidrug efflux system D PAGR_g1037 multidrug resistance protein A EmrA K03543 emrA; membrane fusion protein, multidrug efflux system D PAGR_g1287 multidrug resistance protein A EmrA K03543 emrA; membrane fusion protein, multidrug efflux system D PAGR_g1425 Leukotoxin secretion protein D LktD K12542 lapC; membrane fusion protein, adhesin transport system D PAGR_g2613 multidrug resistance protein MexA precursor MexA K03585 acrA; membrane fusion protein, multidrug efflux system D PAGR_g3184 acriflavine resistance protein A AcrA K03585 acrA; membrane fusion protein, multidrug efflux system D PAGR_g2953 putative membrane protein YbhT K25859 acrZ; accessory protein, multidrug efflux pump D PAGR_p084 acriflavine resistance protein A AcrA K21136 triA; membrane fusion protein, multidrug efflux system D PAGR_g2271 acriflavine resistance protein A precursor AcrA K19586 oqxA; membrane fusion protein, multidrug efflux system D PAGR_g3699 multidrug resistance protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system D PAGR_g1514 multidrug resistance protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system D PAGR_g0476 p-hydroxybenzoic acid efflux pump AaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA D PAGR_g1526 putative tyrosine-protein kinase AmsA K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D PAGR_g2965 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D PAGR_g3899 ferrous iron transport protein A FeoA K04758 feoA; ferrous iron transport protein A D PAGR_g3898 ferrous iron transport protein B FeoB K04759 feoB; ferrous iron transport protein B D PAGR_g3975 putative PUP family transporter K17938 sbmA; peptide/bleomycin uptake transporter D PAGR_g0268 universal stress protein B UspB K06144 uspB; universal stress protein B D PAGR_g3772 entericidin A EcnA K16347 ecnA; entericidin A D PAGR_g3771 entericidin B EcnB K16348 ecnB; entericidin B D PAGR_g1326 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D PAGR_g2093 MgtC family transporter YhiD K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D PAGR_g2182 MgtC family protein YhiD K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D PAGR_g2338 transthyretin-like protein YedX K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D PAGR_g3333 hydroxyisourate hydrolase YedX K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D PAGR_g1912 Copper resistance protein D K07245 pcoD; copper resistance protein D D PAGR_g1911 copper resistance protein CopC K07156 copC; copper resistance protein C D PAGR_g1982 MltA-interacting protein MipA K07274 mipA; MipA family protein D PAGR_g4174 MltA-interacting protein MipA K07274 mipA; MipA family protein D PAGR_p087 MltA-interacting MipA family protein YiaT K07274 mipA; MipA family protein C 02044 Secretion system [BR:paq02044] D PAGR_g0705 outer membrane protein TolC K12340 tolC; outer membrane protein D PAGR_g1424 cyclolysin secretion/processing ATP-binding protein CyaB K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PAGR_g1425 Leukotoxin secretion protein D LktD K12542 lapC; membrane fusion protein, adhesin transport system D PAGR_g1423 type I secretion protein CyaE K12543 lapE; outer membrane protein, adhesin transport system D PAGR_g0409 type 4 prepilin-like proteins leader peptide processing enzyme TapD K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D PAGR_g1166 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D PAGR_g0864 twitching motility protein YggR K02669 pilT; twitching motility protein PilT D PAGR_g0922 prepilin peptidase dependent protein A PpdA K02679 ppdA; prepilin peptidase dependent protein A D PAGR_g0923 prepilin peptidase dependent protein B PpdB K02680 ppdB; prepilin peptidase dependent protein B D PAGR_g0925 putative prepilin peptidase dependent protein C K02681 ppdC; prepilin peptidase dependent protein C D PAGR_g3463 prepilin peptidase dependent protein D PpdD K02682 ppdD; prepilin peptidase dependent protein D D PAGR_g3464 type II secretion system protein E HofB K02504 hofB; protein transport protein HofB D PAGR_g3465 type II secretion system protein F HofC K02505 hofC; protein transport protein HofC D PAGR_g0361 periplasmic protein YrfD K12288 hofM; pilus assembly protein HofM D PAGR_g0362 hypothetical protein K12289 hofN; pilus assembly protein HofN D PAGR_g0363 hypothetical protein K12290 hofO; pilus assembly protein HofO D PAGR_g0364 hypothetical protein K12291 hofP; pilus assembly protein HofP D PAGR_g0365 type IV pilus secretin PilQ K02507 hofQ; protein transport protein HofQ D PAGR_g0861 integral membrane protein YggT K02221 yggT; YggT family protein D PAGR_g3205 competence protein ComEA K02237 comEA; competence protein ComEA D PAGR_g2792 DNA internalization-related competence protein YcaI K02238 comEC; competence protein ComEC D PAGR_g1875 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PAGR_g1874 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PAGR_g1746 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D PAGR_g1744 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D PAGR_g1743 flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PAGR_g1738 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PAGR_g1737 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D PAGR_g1736 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D PAGR_g1735 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PAGR_g1734 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D PAGR_g3888 chromosome partitioning protein K12055 K12055; chromosome partitioning related protein ParA D PAGR_g3858 TraG-family plasmid transfer protein K12071 traD; conjugal transfer pilus assembly protein TraD D PAGR_g0905 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D PAGR_g3070 putative adhesin autotransporter YdeU K12678 aidA-I; autotransporter family porin D PAGR_p025 lipase 1 Lip-1 K12686 apeE; outer membrane lipase/esterase D PAGR_g2452 type VI secretion system protein IcmF K11891 impL; type VI secretion system protein ImpL D PAGR_g1659 type VI secretion system protein IcmF K11891 impL; type VI secretion system protein ImpL D PAGR_g2451 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK D PAGR_g1658 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK D PAGR_g1657 type VI secretion system protein ImpJ K11893 impJ; type VI secretion system protein ImpJ D PAGR_g1673 type VI secretion system protein ImpH K11895 impH; type VI secretion system protein ImpH D PAGR_g1672 type VI secretion system protein ImpG K11896 impG; type VI secretion system protein ImpG D PAGR_g1671 type VI secretion system lysozyme-like protein K11897 impF; type VI secretion system protein ImpF D PAGR_g1663 type VI secretion system protein ImpC K11900 impC; type VI secretion system protein ImpC D PAGR_g1662 type VI secretion system protein ImpB K11901 impB; type VI secretion system protein ImpB D PAGR_g1661 type VI secretion system protein ImpA K11902 impA; type VI secretion system protein ImpA D PAGR_g1583 hemolysin co-regulated protein Hcp1 K11903 hcp; type VI secretion system secreted protein Hcp D PAGR_g1584 hemolysin co-regulated protein Hcp1 K11903 hcp; type VI secretion system secreted protein Hcp D PAGR_g1664 type VI secretion system effector protein hcp K11903 hcp; type VI secretion system secreted protein Hcp D PAGR_g3636 putative type VI secretion system, effector protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D PAGR_g1684 putative type VI secretion system effector protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D PAGR_g1676 putative type VI secretion system effector protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D PAGR_g1656 type VI secretion system protein VasD K11906 vasD; type VI secretion system protein VasD D PAGR_g1674 type VI secretion system protein VasG K11907 vasG; type VI secretion system protein VasG D PAGR_g1660 type VI secretion system protein ImpM K11890 impM; type VI secretion system protein ImpM D PAGR_g2453 type VI secretion system protein ImpM K11890 impM; type VI secretion system protein ImpM D PAGR_g1670 putative type VI secretion system-associated protein K11898 impE; type VI secretion system protein ImpE D PAGR_g2621 fimbrial protein FimA K07345 fimA; major type 1 subunit fimbrin (pilin) D PAGR_g3575 fimbrial protein F17a-A K07345 fimA; major type 1 subunit fimbrin (pilin) D PAGR_g1304 major fimbrial subunit protein SmfA K07345 fimA; major type 1 subunit fimbrin (pilin) D PAGR_g0747 pili assembly chaperone SfmC K07346 fimC; fimbrial chaperone protein D PAGR_g3574 fimbrial chaperone protein MrkB K07346 fimC; fimbrial chaperone protein D PAGR_g3573 outer membrane usher protein HtrE K07347 fimD; outer membrane usher protein D PAGR_g2623 outer membrane usher protein HifC K07347 fimD; outer membrane usher protein D PAGR_g0746 outer membrane usher protein FimD K07347 fimD; outer membrane usher protein D PAGR_g0744 type 1 Pili protein CsuE K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D PAGR_g0748 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D PAGR_g0749 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D PAGR_g1301 fimbrial usher protein PapC K12518 papC; outer membrane usher protein PapC D PAGR_g1307 fimbrial chaperone YfcS K12519 papD; chaperone protein PapD D PAGR_g1302 fimbrial chaperone protein PapD K12519 papD; chaperone protein PapD D PAGR_g3471 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PAGR_g0154 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D PAGR_g3240 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D PAGR_g4068 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D PAGR_g3239 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D PAGR_g3724 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PAGR_g3472 SSecA regulator SecMecretion monitor SecM K13301 secM; secretion monitor D PAGR_g0431 Preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PAGR_g1011 signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PAGR_g0309 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D PAGR_g3241 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PAGR_g4183 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PAGR_g4085 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D PAGR_g4084 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D PAGR_g4083 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D PAGR_g3041 Sec-independent protein translocase TatE K03425 tatE; sec-independent protein translocase protein TatE C 02042 Bacterial toxins [BR:paq02042] D PAGR_g0520 putative transporter YtfL K03699 tlyC; magnesium and cobalt exporter, CNNM family D PAGR_g1009 HlyC/CorC family transporter YfjD K03699 tlyC; magnesium and cobalt exporter, CNNM family D PAGR_g0899 hemolysin III family channel protein YqfA K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:paq02022] D PAGR_g3251 phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PAGR_g3252 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D PAGR_g2635 virulence sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D PAGR_g2634 two component transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D PAGR_g0353 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D PAGR_g0352 osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D PAGR_g2104 two component sensor kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D PAGR_g2105 transcriptional regulatory protein RstA K07661 rstA; two-component system, OmpR family, response regulator RstA D PAGR_g0158 sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D PAGR_g0159 DNA-binding transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D PAGR_g1510 integral membrane sensor signal transduction histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D PAGR_g1509 Two-component system response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR D PAGR_g1858 two-component sensor kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D PAGR_g1859 two component transcriptional regulator PmrA K07771 basR; two-component system, OmpR family, response regulator BasR D PAGR_g0079 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D PAGR_g0080 transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D PAGR_g0246 Osmosensitive K channel His kinase sensor KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PAGR_g3002 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PAGR_g3758 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D PAGR_g3544 aerobic respiration control protein ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D PAGR_g1353 integral membrane sensor signal transduction histidine kinase QseC K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D PAGR_g1352 transcriptional regulatory protein TctD K07774 tctD; two-component system, OmpR family, response regulator TctD D PAGR_g1066 integral membrane sensor signal transduction histidine kinase BaeS K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D PAGR_g1067 two component transcriptional regulatory protein BaeR K18144 adeR; two-component system, OmpR family, response regulator AdeR D PAGR_g3967 periplasmic sensor signal transduction histidine kinase QseC K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D PAGR_g1258 sensor protein CpxA K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D PAGR_g1257 transcriptional regulatory protein CpxR K02483 K02483; two-component system, OmpR family, response regulator D PAGR_g3966 transcriptional regulatory protein QseB K02483 K02483; two-component system, OmpR family, response regulator D PAGR_g1227 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D PAGR_g1226 nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D PAGR_g1417 integral membrane sensor hybrid histidine kinase RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D PAGR_g1419 sensor-like histidine kinase YojN K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D PAGR_g1418 exopolysaccharide synthesis regulation protein RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D PAGR_g0955 hybrid sensory histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D PAGR_g2728 two component transcriptional regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D PAGR_g2963 virulence sensor protein BvgS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D PAGR_g2962 LuxR family two component transcriptional regulator FimZ K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ D PAGR_g1242 sensor kinase CitA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D PAGR_g1241 two-component system transcriptional regulatory protein CitB K07702 dpiA; two-component system, CitB family, response regulator CitB D PAGR_p201 two-component sensor protein DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D PAGR_p202 two-component response regulator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR D PAGR_g1283 signal transduction histidine kinase YpdA K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D PAGR_g1282 two component transcriptional regulator YpdB K02477 K02477; two-component system, LytTR family, response regulator D PAGR_g0099 nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PAGR_g0098 nitrogen assimilation regulatory protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D PAGR_g1144 putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D PAGR_g1146 two component transcriptional regulator YfhA K07715 glrR; two-component system, NtrC family, response regulator GlrR D PAGR_g1866 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PAGR_g1872 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PAGR_g1871 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PAGR_g3289 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D PAGR_g1998 response regulator receiver protein Hnr K02485 rssB; two-component system, response regulator C 02035 Bacterial motility proteins [BR:paq02035] D PAGR_g1866 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PAGR_g1867 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PAGR_g1870 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PAGR_g1871 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PAGR_g1872 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PAGR_g1873 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D PAGR_g3289 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D PAGR_g0507 methyl-accepting chemotaxis protein I Tsr K03406 mcp; methyl-accepting chemotaxis protein D PAGR_p054 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1606 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_p147 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_p149 methyl-accepting chemotaxis serine transducer Tse K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0818 methyl-accepting chemotaxis protein TlpA K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0820 methyl-accepting chemotaxis protein McpB K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0822 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2550 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0870 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3446 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0034 Biofilm dispersion protein bdlA K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2654 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1914 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1919 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3633 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2909 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g2119 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3901 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g3949 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0595 methyl-accepting chemotaxis citrate transducer Tcp K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g0607 methyl-accepting chemotaxis protein II Tar K03406 mcp; methyl-accepting chemotaxis protein D PAGR_g1869 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g1868 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g1720 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_p184 methyl-accepting chemotaxis protein I Tsr K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g3922 methyl-accepting chemotaxis citrate transducer Tcp K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_g0528 methyl-accepting chemotaxis protein II Tar K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D PAGR_p098 Methyl-accepting chemotaxis citrate transducer Tar K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D PAGR_g1336 methyl-accepting chemotaxis protein II Tar K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D PAGR_g2969 methyl-accepting chemotaxis protein III Trg K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D PAGR_g1732 methyl-accepting chemotaxis protein III Trg K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D PAGR_g2686 methyl-accepting chemotaxis protein III Trg K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D PAGR_g3970 methyl-accepting chemotaxis protein II Tar K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D PAGR_g3979 aerotaxis receptor Aer K03776 aer; aerotaxis receptor D PAGR_g1744 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D PAGR_g1743 flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PAGR_g1742 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D PAGR_g1737 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D PAGR_g1736 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D PAGR_g1735 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PAGR_g1734 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D PAGR_g1875 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PAGR_g1874 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PAGR_g1876 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D PAGR_g1745 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D PAGR_g1739 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D PAGR_g1738 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PAGR_g1746 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D PAGR_g2675 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D PAGR_g2683 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D PAGR_g2676 flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D PAGR_g1740 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D PAGR_g1747 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D PAGR_g1741 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D PAGR_g2682 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D PAGR_g2681 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D PAGR_g2680 flagella basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D PAGR_g2678 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D PAGR_g2677 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D PAGR_g2674 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D PAGR_g2679 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D PAGR_g2673 flagellar hook-associated protein 1 FlgK K02396 flgK; flagellar hook-associated protein 1 D PAGR_g2672 flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D PAGR_g2685 flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D PAGR_g0723 flagellin FliC K02406 fliC; flagellin D PAGR_g1759 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_g1760 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_g1761 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_g1762 flagellar biosynthesis protein FliC K02406 fliC; flagellin D PAGR_p113 flagellin FliC K02406 fliC; flagellin D PAGR_p148 flagellin protein FliC K02406 fliC; flagellin D PAGR_g1758 flagellar hook-associated protein 2 FliD K02407 fliD; flagellar hook-associated protein 2 D PAGR_p114 flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2 D PAGR_g1757 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS D PAGR_g1756 flagellar export chaperone FliT K02423 fliT; flagellar protein FliT D PAGR_g1862 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D PAGR_g1863 flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D PAGR_g1774 RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA D PAGR_g1864 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D PAGR_g1865 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PAGR_g1777 cystine transporter subunit FliY K02424 tcyA; L-cystine transport system substrate-binding protein D PAGR_g1775 flagella biosynthesis protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D PAGR_g2684 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D PAGR_g0864 twitching motility protein YggR K02669 pilT; twitching motility protein PilT D PAGR_g1166 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D PAGR_g2621 fimbrial protein FimA K07345 fimA; major type 1 subunit fimbrin (pilin) D PAGR_g3575 fimbrial protein F17a-A K07345 fimA; major type 1 subunit fimbrin (pilin) D PAGR_g1304 major fimbrial subunit protein SmfA K07345 fimA; major type 1 subunit fimbrin (pilin) D PAGR_g0747 pili assembly chaperone SfmC K07346 fimC; fimbrial chaperone protein D PAGR_g3574 fimbrial chaperone protein MrkB K07346 fimC; fimbrial chaperone protein D PAGR_g3573 outer membrane usher protein HtrE K07347 fimD; outer membrane usher protein D PAGR_g2623 outer membrane usher protein HifC K07347 fimD; outer membrane usher protein D PAGR_g0746 outer membrane usher protein FimD K07347 fimD; outer membrane usher protein D PAGR_g0744 type 1 Pili protein CsuE K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D PAGR_g0748 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D PAGR_g0749 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:paq04812] D PAGR_g0467 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D PAGR_g3474 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PAGR_g3475 cell division protein FtsA K03590 ftsA; cell division protein FtsA D PAGR_g1967 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D PAGR_g1966 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D PAGR_g1965 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D PAGR_p002 plasmid partition protein A ParA K03496 parA; chromosome partitioning protein D PAGR_p003 plasmid partition protein B ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:paq04147] D PAGR_g3175 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D PAGR_g3810 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAGR_g0960 enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PAGR_g1985 glyceraldehyde-3-phosphate dehydrogenase GapA K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PAGR_g0878 phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PAGR_g1902 pyruvate kinase II PykA K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAGR_g2386 pyruvate kinase I PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D PAGR_g0375 peptidyl-prolyl cis-trans isomerase A precursor PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D PAGR_g2255 renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PAGR_g3776 60 kDa chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PAGR_g3534 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D PAGR_g4029 glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PAGR_g3912 gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D PAGR_g1085 gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D PAGR_g1178 inosine-5'-monophosphate dehydrogenase GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PAGR_g4069 elongation factor Tu-A TufA K02358 tuf; elongation factor Tu D PAGR_g0406 elongation factor Tu-A TufA K02358 tuf; elongation factor Tu D PAGR_g2653 diadenosine tetraphosphate (Ap4A) hydrolase family protein YcfF K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PAGR_g1268 cytochrome oxidase YfeH K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D PAGR_g1963 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PAGR_g3174 adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] D PAGR_g3179 adenine phosphoribosyltransferase Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PAGR_g0193 argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PAGR_g0192 argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PAGR_g0529 fructose-1,6-bisphosphatase Fbp K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D PAGR_g2957 galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6] D PAGR_g0333 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D PAGR_g0173 glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PAGR_g2594 glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PAGR_g0100 glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PAGR_g0284 delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PAGR_g2201 alkaline phosphatase precursor PhoA K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAGR_g2530 Glyoxylate reductase GyaR K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g0886 D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1072 D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1086 D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g1099 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PAGR_g4048 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PAGR_g3453 dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PAGR_p055 Glu/Leu/Phe/Val dehydrogenase GdhA K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D PAGR_g1904 glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAGR_p105 glucose-6-phosphate 1-dehydrogenase Zwf2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PAGR_g0167 triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PAGR_g3811 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g2959 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PAGR_g3770 lipocalin family protein Blc K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:paq02048] D PAGR_g3657 type III restriction enzyme, res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D PAGR_g3656 type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D PAGR_g3655 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D PAGR_g0369 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAGR_g0650 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PAGR_g1801 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAGR_g1721 modification methylase EcoRII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PAGR_g2852 HNH endonuclease family protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D PAGR_g3860 restriction endonuclease K07448 mrr; restriction system protein D PAGR_g1586 hypothetical protein K19048 symE; toxic protein SymE D PAGR_g3645 endoribonuclease SymE K19048 symE; toxic protein SymE D PAGR_g1715 Programmed cell death toxin PemK K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D PAGR_g1714 Programmed cell death antitoxin PemI K18842 chpS; antitoxin ChpS D PAGR_g1554 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D PAGR_g3667 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D PAGR_g2157 toxin-antitoxin system, toxin component, HipA family K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D PAGR_g2156 toxin-antitoxin system, antitoxin component, Xre family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D PAGR_g2478 mRNA interferase toxin of the YafO-YafN toxin-antitoxin syste K19160 yafO; mRNA interferase YafO [EC:3.1.-.-] D PAGR_g2479 antitoxin of the YafO-YafN toxin-antitoxin system K19161 yafN; antitoxin YafN D PAGR_g3193 hemolysin expression-modulating protein Hha K05839 hha; haemolysin expression modulating protein D PAGR_g3192 Biofilm formation regulator YbaJ K19162 tomB; hha toxicity modulator TomB D PAGR_g2081 phage shock protein C PspC K03973 pspC; phage shock protein C D PAGR_g2080 phage shock protein B PspB K03970 pspB; phage shock protein B D PAGR_p067 short-chain dehydrogenase/reductase SDR K19334 tabA; biofilm protein TabA D PAGR_g3626 cytoplasmic protein YiaL K19334 tabA; biofilm protein TabA D PAGR_g2695 biofilm formation regulatory protein BssS K12148 bssS; biofilm regulator BssS D PAGR_g3474 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PAGR_g0467 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D PAGR_g0720 topoisomerase IV subunit A ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PAGR_g0710 topoisomerase IV subunit B ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PAGR_g1271 glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PAGR_g0902 hypothetical protein K19168 cptA; toxin CptA D PAGR_g0901 TPR repeat protein YgfY K09159 cptB; antitoxin CptB D PAGR_g1158 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:paq04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:paq04090] C 01504 Antimicrobial resistance genes [BR:paq01504] D PAGR_g1901 Chloramphenicol resistance pump Cmr K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D PAGR_g3560 multidrug translocase Cmr K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D PAGR_g2702 methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D PAGR_g0773 pentapeptide repeat-containing protein K18555 qnr; fluoroquinolone resistance protein D PAGR_g2350 beta-lactamase CTX-M-105 K17836 penP; beta-lactamase class A [EC:3.5.2.6] D PAGR_g0277 D-alanyl-D-alanine dipeptidase DdpX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PAGR_g2635 virulence sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D PAGR_g2634 two component transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D PAGR_g2613 multidrug resistance protein MexA precursor MexA K03585 acrA; membrane fusion protein, multidrug efflux system D PAGR_g3184 acriflavine resistance protein A AcrA K03585 acrA; membrane fusion protein, multidrug efflux system D PAGR_g3185 acriflavine resistance protein B AcrB K18138 acrB; multidrug efflux pump D PAGR_g2614 acriflavine resistance protein B AcrB K18138 acrB; multidrug efflux pump D PAGR_g2615 outer membrane protein OprM K18139 oprM; outer membrane protein, multidrug efflux system D PAGR_g2713 efflux pump outer membrane protein OprM K18139 oprM; outer membrane protein, multidrug efflux system D PAGR_g3164 HTH-type transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D PAGR_g1066 integral membrane sensor signal transduction histidine kinase BaeS K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D PAGR_g1067 two component transcriptional regulatory protein BaeR K18144 adeR; two-component system, OmpR family, response regulator AdeR D PAGR_g1069 acriflavine resistance protein B AcrB K18146 adeB; multidrug efflux pump D PAGR_g0705 outer membrane protein TolC K12340 tolC; outer membrane protein D PAGR_g3965 ultiple antibiotic resistance protein MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D PAGR_g2270 multiple antibiotic resistance protein MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D PAGR_g2434 outer membrane protein F OmpF K09476 ompF; outer membrane pore protein F D PAGR_g0253 OmpF K09476 ompF; outer membrane pore protein F D PAGR_g2777 outer membrane protein F OmpF K09476 ompF; outer membrane pore protein F C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:paq00537] D PAGR_g2201 alkaline phosphatase precursor PhoA K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PAGR_g0830 Alpha,alpha-trehalase TreF K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D PAGR_g2590 periplasmic trehalase TreA K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D PAGR_g2255 renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:paq03200] D PAGR_g1824 bacteriophage lysis protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:paq03100] D PAGR_gt29 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt30 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt04 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt77 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt62 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt08 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt71 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt24 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D PAGR_gt19 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt22 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt21 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt20 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt82 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt59 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt31 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PAGR_gt33 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PAGR_gt36 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PAGR_gt34 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PAGR_gt35 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PAGR_gt43 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PAGR_gt05 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PAGR_gt61 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PAGR_gt60 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D PAGR_gt45 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D PAGR_gt54 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PAGR_gt55 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PAGR_gt57 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PAGR_gt58 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PAGR_gt12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PAGR_gt74 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PAGR_gt10 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PAGR_gt11 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PAGR_gt46 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D PAGR_gt81 tRNA-His K14226 tRNA-His; tRNA His D PAGR_gt01 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt78 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt07 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt72 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt03 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt63 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt23 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PAGR_gt53 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt64 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt80 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt66 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt65 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt67 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt69 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt44 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PAGR_gt25 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PAGR_gt49 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PAGR_gt51 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PAGR_gt50 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D PAGR_gt52 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt56 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt15 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt68 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt17 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt16 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt13 tRNA-Met K14230 tRNA-Met; tRNA Met D PAGR_gt14 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PAGR_gt70 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PAGR_gt79 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PAGR_gt83 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PAGR_gt32 tRNA-Arg K14232 tRNA-Pro; tRNA Pro D PAGR_gt18 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PAGR_gt37 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PAGR_gt47 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PAGR_gt48 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PAGR_gt09 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PAGR_gt73 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PAGR_gt76 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D PAGR_gt06 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D PAGR_gt38 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PAGR_gt75 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PAGR_gt39 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D PAGR_gt41 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_gt26 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_gt27 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_gt28 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_gt40 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_gt42 tRNA-Val K14237 tRNA-Val; tRNA Val D PAGR_gr07 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr11 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr19 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr22 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D PAGR_gr02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr21 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D PAGR_gr20 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr13 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr17 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr09 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr10 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D PAGR_gr06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D PAGR_g3605 gluconate 5-dehydrogenase Gno K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D PAGR_g3604 L-idonate 5-dehydrogenase IdnD K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D PAGR_g0724 2,5-diketo-D-gluconic acid reductase A DkgA K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D PAGR_p072 4-hydroxythreonine-4-phosphate dehydrogenase 2 PdxA2 K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D PAGR_g1571 3-hydroxyisobutyrate dehydrogenase YgbJ K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D PAGR_g1279 oxidoreductase YghZ K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D PAGR_p191 hypothetical protein K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14] D PAGR_g2844 glucose/Sorbosone dehydrogenase YliI K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D PAGR_g3231 aldo/keto reductase YajO K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D PAGR_g0585 2,4-dienoyl-CoA reductase FadH K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D PAGR_g2229 Alcohol dehydrogenase zinc-binding domain protein YncB K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D PAGR_g2252 coenzyme PQQ biosynthesis protein C PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D PAGR_g2228 fructosyl-amino acid oxidase K25952 socD; fructosyl amine oxidase (glucosone-forming) [EC:1.5.3.25] D PAGR_g2696 N-methyl-L-tryptophan oxidase SolA K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-] D PAGR_g4012 quinone oxidoreductase Qor K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D PAGR_g0712 modulator of drug activity B MdaB K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D PAGR_g2099 acyl carrier protein phosphodiesterase AcpD K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D PAGR_g1500 alkyl hydroperoxide reductase subunit F AhpF K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D PAGR_g1857 peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D PAGR_g1986 peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D PAGR_g3947 glutathione S-transferase YghU K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D PAGR_g0564 glutathione S-transferase YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D PAGR_g0465 putative sulfite oxidase subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D PAGR_g2125 cytochrome b561 CybB K12262 cybB; superoxide oxidase [EC:1.10.3.17] D PAGR_g0826 arylesterase MhpC K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D PAGR_g1214 putative peroxiredoxin Bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PAGR_p165 putative peroxiredoxin Bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PAGR_g2086 thiol peroxidase Tpx K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PAGR_g1499 alkyl hydroperoxide reductase subunit C AhpC K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D PAGR_g3279 peroxiredoxin OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D PAGR_g4157 Ohr subfamily peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D PAGR_g0327 pirin domain-containing protein YhhW K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D PAGR_g2209 hypothetical protein K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63] D PAGR_g0215 hypothetical protein K24448 hilA; L-isoleucine 31-dioxygenase [EC:1.14.11.74] D PAGR_g0214 hypothetical protein K24449 hliB; 31-hydroxy-L-isoleucine 4-dioxygenase [EC:1.14.11.75] D PAGR_g1148 flavohemoprotein Hmp K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D PAGR_g3562 alcaligin biosynthesis enzyme AlcA K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252] D PAGR_g1792 dibenzothiophene desulfurization enzyme A SoxA K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D PAGR_g0841 siderophore-interacting protein YqjH K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9] D PAGR_g0772 ferritin-1 FtnA K02217 ftnA; ferritin [EC:1.16.3.2] D PAGR_g3440 blue copper oxidase CueO K14588 cueO; cuproxidase [EC:1.16.3.4] D PAGR_g0169 ferredoxin-NADP reductase Fpr K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D PAGR_g2539 arsenate reductase ArsC K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D PAGR_g1199 arsenate reductase YfgD K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D PAGR_g2213 arsenate reductase ArsC K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D PAGR_g2250 coenzyme PQQ biosynthesis protein E PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D PAGR_g3705 anaerobic ribonucleoside-triphosphate reductase-activating protein NrdG K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D PAGR_g2801 pyruvate formate-lyase 1-activating enzyme PflA K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PAGR_g1922 SDR family dehydrogenase protein DltE K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-] D PAGR_g0991 protein-L-isoaspartate O-methyltransferase Pcm K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D PAGR_g2383 cyclopropane-fatty-acyl-phospholipid synthase Cfa K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D PAGR_g0999 trans-aconitate 2-methyltransferase Tam K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D PAGR_g1189 tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D PAGR_g2708 glucans biosynthesis protein C MdoC K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-] D PAGR_g0968 N-acetyltransferase family protein K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D PAGR_g3022 apolipoprotein N-acyltransferase Lnt K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D PAGR_g3710 acetyltransferase YhbS K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D PAGR_g3685 acetyltransferase YjgM K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D PAGR_g2565 IAA acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D PAGR_g2811 leucyl/phenylalanyl-tRNA--protein transferase Aat K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D PAGR_g0348 putative sucrose phosphorylase YcjM K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D PAGR_g1031 DTW domain-containing protein YfiP K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D PAGR_g0920 prolipoprotein diacylglyceryl transferase Lgt K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D PAGR_g1429 thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D PAGR_p203 thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D PAGR_g0535 ribokinase YihV K18478 yihV; sulfofructose kinase [EC:2.7.1.184] D PAGR_g1572 type III effector Hrp-dependent outer protein YgbK K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D PAGR_g3447 Hrp-dependent type III effector protein YgbK K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D PAGR_g2399 putative phosphotransferase YdiA K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D PAGR_g0698 glutamate-ammonia-ligase adenylyltransferase GlnE K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D PAGR_g2488 reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D PAGR_g2401 SelO family protein YdiU K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D PAGR_g3596 phosphoglycerol transferase I MdoB K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D PAGR_g4040 isocitrate dehydrogenase kinase/phosphatase AceK K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D PAGR_g2118 para-nitrobenzyl esterase PnbA K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D PAGR_g0821 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D PAGR_g2976 tol-pal system-associated acyl-CoA thioesterase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D PAGR_p039 sugar phosphatase SupH K07757 ybiV; sugar-phosphatase [EC:3.1.3.23] D PAGR_g2030 metal-dependent phosphoesterase TrpH K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D PAGR_g1335 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D PAGR_g1460 diguanylate phosphodiesterase Rtn K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D PAGR_g0287 EAL domain protein Rtn K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D PAGR_g4143 putative phosphodiesterase YhjK K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D PAGR_g0241 metal dependent phosphohydrolase RpfG K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D PAGR_g0868 nuclease NucM K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D PAGR_g4082 deoxyribonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PAGR_g2656 putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PAGR_g0778 putative deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PAGR_g3005 esterase YbfF K01175 ybfF; esterase [EC:3.1.-.-] D PAGR_g3312 esterase YafA K11750 frsA; esterase FrsA [EC:3.1.-.-] D PAGR_g4144 minor endoglucanase Y CelY K20542 bcsZ; endoglucanase [EC:3.2.1.4] D PAGR_g3902 exoglucanase/xylanase Cex K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D PAGR_g1823 phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D PAGR_g3121 endolysin K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D PAGR_g3305 putative phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D PAGR_g0667 phage lysozyme NucD2 K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D PAGR_g0621 Prophage lysozyme NucD2 K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D PAGR_g3614 putative glycosyl hydrolase YteR K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D PAGR_g0540 alpha-glucosidase YihQ K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199] D PAGR_g1700 alpha-mannosidase YbgG K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-] D PAGR_g0444 peptide deformylase Def K01462 PDF; peptide deformylase [EC:3.5.1.88] D PAGR_g2173 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D PAGR_g3042 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YbeM K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D PAGR_g3691 L-PSP family endoribonuclease YjgF K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D PAGR_p005 translation initiation inhibitor YjgF K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D PAGR_g0697 adenylate cyclase YgiF K18446 ygiF; triphosphatase [EC:3.6.1.25] D PAGR_g1230 ADP-ribose pyrophosphatase YffH K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-] D PAGR_g2669 Maf-like protein YceF K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D PAGR_g0077 regulatory ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D PAGR_g2354 UV DNA damage endonuclease UvsE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D PAGR_g1573 L-fuculose phosphate aldolase YgbL K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D PAGR_g3932 phenolic acid decarboxylase PadC K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-] D PAGR_g0537 tagatose-bisphosphate aldolase YihT K01671 yihT; sulfofructosephosphate aldolase [EC:4.1.2.57] D PAGR_g3368 fructose-6-phosphate aldolase 2 FsaB K08314 fsaB; fructose-6-phosphate aldolase 2 [EC:4.1.2.-] D PAGR_g0491 sugar kinase YjeF K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D PAGR_g0936 cysteine sulfinate desulfinase CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D PAGR_g1594 L-rhamnose 1-epimerase YiiL K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D PAGR_g3367 D-arabinose 5-phosphate isomerase GutQ K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13] D PAGR_g0538 N-acylglucosamine 2-epimerase YihS K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D PAGR_g1574 hydroxypyruvate isomerase YgbM K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D PAGR_g0530 UDP-N-acetylmuramate Mpl K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D PAGR_g2327 electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D PAGR_g2326 electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D PAGR_g2325 electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D PAGR_g0304 lead, cadmium, zinc and mercury transporting ATPase ZntA K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D PAGR_g1058 magnesium-translocating P-type ATPase MgtB K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D PAGR_g3427 sugar fermentation stimulation protein SfsA K06206 sfsA; sugar fermentation stimulation protein A D PAGR_p140 myo-inositol catabolism protein IolH K06605 iolH; myo-inositol catabolism protein IolH D PAGR_g2154 putative glycoside hydrolase BglX K17641 bxlA; beta-xylosidase C 99982 Energy metabolism D PAGR_g4170 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D PAGR_g1410 ferredoxin YfaE K11107 yfaE; ferredoxin D PAGR_g2328 electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D PAGR_g2329 electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D PAGR_g2324 electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D PAGR_g0073 Sulfite reductase K06205 mioC; MioC protein D PAGR_g0903 flavodoxin-2 FldB K03840 fldB; flavodoxin II D PAGR_g0533 cytochrome b562 CybC K15536 cybC; soluble cytochrome b562 D PAGR_g3007 flavodoxin FldA K03839 fldA; flavodoxin I C 99983 Lipid metabolism D PAGR_g0506 acyl-CoA dehydrogenase domain-containing protein AidB K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism D PAGR_g1045 ribonucleotide reductase stimulatory protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D PAGR_g1264 putative sulfate transport proteinCysZ K06203 cysZ; CysZ protein D PAGR_g3388 Lactoylglutathione Lyase YaeR K08234 yaeR; glyoxylase I family protein D PAGR_g2088 carboxypeptidase YcjI K14054 mpaA; murein peptide amidase A D PAGR_g0862 alanine racemase domain protein YggS K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D PAGR_g1527 amylovoran biosynthesis protein AmsC K16708 amsC; amylovoran biosynthesis protein AmsC D PAGR_g1531 amylovoran biosynthesis protein AmsF K16709 amsF; amylovoran biosynthesis protein AmsF D PAGR_g2045 inner membrane protein YciS K08992 lapA; lipopolysaccharide assembly protein A D PAGR_g2046 N-acetylglucosaminyl transferase YciM K19804 lapB; lipopolysaccharide assembly protein B D PAGR_g2931 lysylphosphatidylglycerol synthetase YbhN K07027 K07027; glycosyltransferase 2 family protein D PAGR_g4147 cellulose synthase 1 AcsAB K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D PAGR_g4119 protoheme IX biogenesis protein HemY K02498 hemY; HemY protein D PAGR_g4086 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein D PAGR_g4087 sterol-binding domain-containing protein YigP K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D PAGR_g0700 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D PAGR_g3711 sterol-binding protein YhbT K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D PAGR_g0089 molybdopterin-guanine dinucleotide biosynthesis protein B MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D PAGR_g0722 cell division protein SufI K04753 sufI; suppressor of ftsI D PAGR_p112 oxidoreductase YieF K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D PAGR_g0568 DoxX family protein YqjF K15977 K15977; putative oxidoreductase D PAGR_g2117 DoxX family protein K15977 K15977; putative oxidoreductase D PAGR_g1221 esterase YpfH K06999 K06999; phospholipase/carboxylesterase D PAGR_g0237 phospholipase/Carboxylesterase YpfH K06999 K06999; phospholipase/carboxylesterase D PAGR_g1030 acetyl-CoA synthetase YfiQ K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D PAGR_g3365 glucitol operon activator protein GutM K02466 gutM; glucitol operon activator protein D PAGR_g0479 barnase inhibitor K03623 yhcO; ribonuclease inhibitor D PAGR_g2268 barnase inhibitor K03623 yhcO; ribonuclease inhibitor D PAGR_g3290 cold-shock DNA-binding domain-containing protein CspB K03704 cspA; cold shock protein D PAGR_g3044 cold-shock DNA-binding domain-containing protein CspE K03704 cspA; cold shock protein D PAGR_g3900 cold-shock DNA-binding domain-containing protein CspB K03704 cspA; cold shock protein D PAGR_g1945 Cold shock-like protein cspC K03704 cspA; cold shock protein D PAGR_g2815 Cold-shock DNA-binding protein CspD K03704 cspA; cold shock protein D PAGR_g4056 anti-RNA polymerase sigma 70 factor Rsd K07740 rsd; regulator of sigma D D PAGR_g3198 nitrogen regulatory protein P-II 2 GlnK K04752 glnK; nitrogen regulatory protein P-II 2 D PAGR_g0349 putative transcriptional accessory protein YhgF K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D PAGR_g2814 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D PAGR_g3211 trigger factor Tig K03545 tig; trigger factor D PAGR_g0464 putative sulfite oxidase subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D PAGR_g4171 formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D PAGR_g1114 SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D PAGR_g1046 glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D PAGR_g0203 Mg chelatase subunit ChlI K07391 comM; magnesium chelatase family protein D PAGR_g0382 OsmC-like protein YhfA K07397 yhfA; putative redox protein D PAGR_g0344 IscR-regulated protein YhgI K07400 nfuA; Fe/S biogenesis protein NfuA D PAGR_g0843 SelT/selW/selH selenoprotein K07401 K07401; selenoprotein W-related protein D PAGR_p021 xanthine dehydrogenase accessory factor YagQ K07402 xdhC; xanthine dehydrogenase accessory factor D PAGR_g2143 xanthine dehydrogenase Accessory factor XdhC K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D PAGR_g3194 methyltransferase YbaZ K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D PAGR_g0941 exodeoxyribonuclease IX Xni K01146 xni; protein Xni D PAGR_g0128 DNA repair protein RadC K03630 radC; DNA repair protein RadC D PAGR_g4089 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D PAGR_g2816 OLD family ATP-dependent endonuclease YbjD K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D PAGR_g0557 endonuclease K07460 yraN; putative endonuclease D PAGR_g3709 endo/excinuclease domain-containing protein YhbQ K07461 K07461; putative endonuclease D PAGR_g0640 DNA protecting protein DprA K04096 smf; DNA processing protein D PAGR_g0445 DNA protecting protein DprA K04096 smf; DNA processing protein D PAGR_g1830 phage terminase large subunit TerL K06909 xtmB; phage terminase large subunit D PAGR_g2804 ATPase AAA family protein YcaJ K07478 ycaJ; putative ATPase D PAGR_g0447 DNA poisomerase I YrdD K07479 yrdD; putative DNA topoisomerase D PAGR_g2475 IS3 transposase K07483 K07483; transposase D PAGR_g3652 putative IS911 transposase orfB K07483 K07483; transposase D PAGR_g3651 putative IS911 transposase orfA K07497 K07497; putative transposase D PAGR_g0803 transposase A K07497 K07497; putative transposase D PAGR_g3998 transposase IS3/IS911 family protein LcrS K07497 K07497; putative transposase D PAGR_g1799 putative integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D PAGR_g2079 phage shock protein A PspA K03969 pspA; phage shock protein A D PAGR_g2082 phage shock protein D PspD K03971 pspD; phage shock protein D D PAGR_g3177 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D PAGR_g1320 formate/nitrite transporter YfdC K21990 yfdC; formate-nitrite transporter family protein D PAGR_g1434 sugar (glycoside-Pentoside-hexuronide) transporter YicJ K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D PAGR_g3458 sugar (Glycoside-Pentoside-Hexuronide) transporter YicJ K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D PAGR_g0543 putative permease YihO K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D PAGR_g0542 inner membrane symporter YihP K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D PAGR_g1211 sugar:cation symporter family protein YicJ K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D PAGR_g2153 putative symporter YagG K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D PAGR_g3074 putative permease YagG K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D PAGR_g2034 citrate transporter CitN K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D PAGR_g2332 tripeptide permease TppB K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D PAGR_g2921 low-affinity inorganic phosphate transporter 1 PitA K03306 TC.PIT; inorganic phosphate transporter, PiT family D PAGR_p069 sodium/proline symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family D PAGR_g3248 branched-chain amino acid transport system II carrier protein BrnQ K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D PAGR_g4027 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D PAGR_g2308 purine-cytosine permease FCY21 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D PAGR_g3360 allantoin permease PucI K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D PAGR_g0122 nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family D PAGR_g1074 anion transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D PAGR_g1098 anion transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D PAGR_g2840 AAE family transporter YbjL K07085 K07085; putative transport protein D PAGR_g3599 periplasmic protein YohN K23243 rcnB; nickel/cobalt homeostasis protein C 99978 Cell growth D PAGR_g2019 intracellular septation protein IspZ K06190 ispZ; intracellular septation protein D PAGR_g0301 putative bacteriophage adsorption lipoprotein DcrB K27311 dcrB; inner membrane lipoprotein DcrB D PAGR_g0151 peptidase YibP K22719 envC; murein hydrolase activator C 99993 Cell motility D PAGR_g2651 Penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator D PAGR_g2752 DNA transformation protein TfoX K07343 tfoX; DNA transformation protein and related proteins D PAGR_g2622 chaperone protein HifB K15540 ecpD; chaperone protein EcpD D PAGR_g3571 fimbrial chaperone protein EcpD K15540 ecpD; chaperone protein EcpD D PAGR_g0944 SecY interacting protein Syd K15723 syd; SecY interacting protein Syd C 99995 Signaling proteins D PAGR_g3460 regulatory protein AmpE K03807 ampE; AmpE protein D PAGR_g1937 putative solute/DNA competence effector ProQ K03607 proQ; ProP effector D PAGR_g0267 universal stress protein A UspA K06149 uspA; universal stress protein A D PAGR_g2111 universal stress protein E UspE K14055 uspE; universal stress protein E D PAGR_g2054 carbon starvation protein A CstA K06200 cstA; carbon starvation protein D PAGR_g0101 GTP-binding protein TypA K06207 typA; GTP-binding protein D PAGR_g1667 FHA domain-containing protein K07169 K07169; FHA domain-containing protein D PAGR_g2454 type VI secretion system, core protein K07169 K07169; FHA domain-containing protein D PAGR_g1789 putative phosphate starvation-inducible protein with ATPase activity PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D PAGR_g3019 PhoH-like ATP-binding protein YbeZ K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D PAGR_g1981 serine protein kinase YeaG K07180 prkA; serine protein kinase D PAGR_g0696 SH3 domain-containing protein YgiM K07184 ygiM; SH3 domain protein D PAGR_g3581 virulence factor, hemolysin regulator Smp K07186 smp; membrane protein D PAGR_g3224 nucleotide-binding protein YajQ K09767 yajQ; cyclic-di-GMP-binding protein D PAGR_p030 diguanylate cyclase/phosphodiesterase YcgF K21973 bluF; blue light- and temperature-responsive anti-repressor D PAGR_g2362 diguanylate cyclase/phosphodiesterase YcgF K21973 bluF; blue light- and temperature-responsive anti-repressor D PAGR_g0598 hypothetical protein K21974 ycgZ; probable RcsB/C two-component-system connector D PAGR_g0600 hypothetical protein K21974 ycgZ; probable RcsB/C two-component-system connector D PAGR_g2342 conserved hypothetical protein K21974 ycgZ; probable RcsB/C two-component-system connector D PAGR_g3268 hypothetical protein K21974 ycgZ; probable RcsB/C two-component-system connector D PAGR_g2210 hypothetical protein K21974 ycgZ; probable RcsB/C two-component-system connector D PAGR_p011 hypothetical protein K21974 ycgZ; probable RcsB/C two-component-system connector D PAGR_g0601 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector D PAGR_g0604 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector D PAGR_p010 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector D PAGR_p012 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector D PAGR_g0602 regulatory protein AriR K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance D PAGR_p009 regulatory protein AriR K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance D PAGR_g2353 hypothetical protein K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance D PAGR_g3264 FAD-dependent pyridine nucleotide-disulfide oxidoreductase HcaD K22747 AIFM3; apoptosis-inducing factor 3 C 99992 Structural proteins D PAGR_g2805 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D PAGR_g2467 outer-membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D PAGR_g1330 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D PAGR_g4128 lipopolysaccharide biosynthesis protein WzzE K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE D PAGR_g2365 outer membrane lipoprotein SlyB K06077 slyB; outer membrane lipoprotein SlyB D PAGR_g3397 outer membrane chaperone OmpH K06142 hlpA; outer membrane protein D PAGR_g0992 lipoprotein NlpD K06194 nlpD; lipoprotein NlpD D PAGR_g3716 TPR repeat-containing protein NlpI K05803 nlpI; lipoprotein NlpI D PAGR_g2022 outer membrane protein W OmpW K07275 ompW; outer membrane protein D PAGR_g2414 salt-induced outer membrane protein YdiY K07283 ydiY; putative salt-induced outer membrane protein D PAGR_g1962 Slp family outer membrane lipoprotein YeaY K07285 slp; outer membrane lipoprotein D PAGR_g3213 putative polymerase/proteinase YajG K07286 yajG; uncharacterized lipoprotein D PAGR_g1521 putative assembly protein AsmA K07289 asmA; AsmA protein D PAGR_g4136 putative outer membrane biogenesis protein YhjG K07290 yhjG; AsmA family protein D PAGR_g3163 Nodulation efficiency family protein YbbJ K07340 ybbJ; inner membrane protein D PAGR_g2049 osmotically inducible lipoprotein B OsmB K04062 osmB; osmotically inducible lipoprotein OsmB D PAGR_g2422 DNA-binding transcriptional activator OsmE K04064 osmE; osmotically inducible lipoprotein OsmE D PAGR_g1325 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D PAGR_g1328 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D PAGR_g1167 putative HTH-type transcriptional regulator YfgA K15539 rodZ; cytoskeleton protein RodZ D PAGR_g0475 AaeX family protein K21695 aaeX; protein AaeX C 99994 Others D PAGR_g0054 phosphate transport system protein PhoU K02039 phoU; phosphate transport system protein D PAGR_g0407 bacterioferritin-associated ferredoxin Bfd K02192 bfd; bacterioferritin-associated ferredoxin D PAGR_g0561 glucans biosynthesis protein D2 precursor OpgD2 K03670 mdoG; periplasmic glucans biosynthesis protein D PAGR_g2707 glucans biosynthesis protein G MdoG K03670 mdoG; periplasmic glucans biosynthesis protein D PAGR_g3781 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D PAGR_g1882 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D PAGR_g1634 phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D PAGR_g3516 phosphoserine phosphatase ApaG K06195 apaG; ApaG protein D PAGR_g3351 FAD dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport B B 09194 Poorly characterized C 99996 General function prediction only D PAGR_g1362 colicin V production protein CvpA K03558 cvpA; membrane protein required for colicin V production D PAGR_g2760 paraquat-inducible protein B PqiB K06192 pqiB; paraquat-inducible protein B D PAGR_g2688 virulence factor MviM K03810 mviM; virulence factor D PAGR_g1406 GCN5-like N-acetyltransferase ElaA K02348 elaA; ElaA protein D PAGR_g2459 cation transport regulator ChaB K06197 chaB; cation transport regulator D PAGR_g0775 osmotically inducible protein Y precursor OsmY K04065 osmY; hyperosmotically inducible periplasmic protein D PAGR_g2588 putative hydrolase YcdX K04477 ycdX; putative hydrolase D PAGR_g2254 coenzyme PQQ biosynthesis protein A PqqA K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A D PAGR_g2253 coenzyme PQQ biosynthesis protein B PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D PAGR_g2251 coenzyme PQQ biosynthesis protein D PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D PAGR_g1122 autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor D PAGR_g1997 patatin YchK K07001 K07001; NTE family protein D PAGR_g3418 iron-sulfur cluster assembly accessory protein YadR K15724 erpA; iron-sulfur cluster insertion protein D PAGR_g2394 Iron-sulfur cluster biosynthesis protein sufA K05997 sufA; Fe-S cluster assembly protein SufA D PAGR_g2393 Iron-sulfur cluster biosynthesis protein sufB K09014 sufB; Fe-S cluster assembly protein SufB D PAGR_g2391 Iron-sulfur cluster biosynthesis protein sufD K09015 sufD; Fe-S cluster assembly protein SufD D PAGR_g2734 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D PAGR_g2419 membrane-bound metal-dependent hydrolase YdjM K07038 K07038; inner membrane protein D PAGR_g3675 aryldialkylphosphatase Pter K07048 PTER; phosphotriesterase-related protein D PAGR_g0103 tRNA-processing ribonuclease Rbn K07058 K07058; membrane protein D PAGR_g0219 inner membrane protein YhjD K07058 K07058; membrane protein D PAGR_g3778 phage T7 F exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA D PAGR_g0934 SufE-like protein YgdK K02426 sufE; cysteine desulfuration protein SufE D PAGR_g2389 cysteine desulfuration protein Suf K02426 sufE; cysteine desulfuration protein SufE D PAGR_g2699 rhodanese-like protein YceA K07146 K07146; UPF0176 protein D PAGR_g2632 putative high frequency lysogenization protein hflD K07153 hflD; high frequency lysogenization protein D PAGR_g3969 glyoxalase/bleomycin resistance protein/dioxygenase PhnB K04750 phnB; PhnB protein D PAGR_g2540 arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D PAGR_g2704 acidic protein MsyB K12147 msyB; acidic protein MsyB D PAGR_g0950 D-glucarate dehydratase GudX K13918 gudX; glucarate dehydratase-related protein D PAGR_g0397 SlyX family protein K03745 slyX; SlyX protein D PAGR_g0446 conserved hypothetical protein Smg K03747 smg; Smg protein D PAGR_g3545 carbon catabolite repressor CreA K05805 creA; CreA protein D PAGR_g0869 GnsA/GnsB family protein K02742 sprT; SprT protein D PAGR_g1361 sporulation domain-containing protein DedD K03749 dedD; DedD protein D PAGR_g0368 DamX protein K03112 damX; DamX protein D PAGR_g1491 Vancomycin resistance protein SanA K03748 sanA; SanA protein D PAGR_g1358 SNARE associated Golgi protein-like protein DedA K03975 dedA; membrane-associated protein D PAGR_g2761 paraquat-inducible protein A PqiA K03808 pqiA; paraquat-inducible protein A D PAGR_g1935 paraquat-inducible protein A YebS K03808 pqiA; paraquat-inducible protein A D PAGR_g1408 putative membrane protein ElaB K05594 elaB; ElaB protein D PAGR_g2084 membrane protein YcjF K08990 ycjF; putative membrane protein D PAGR_g0307 inner membrane protein YhhL K08993 yhhL; putative membrane protein D PAGR_g3920 inner membrane protein YagU K08996 yagU; putative membrane protein D PAGR_g1996 SEC-C motif domain-containing protein K09858 K09858; SEC-C motif domain protein D PAGR_g3195 putative outer membrane lipoprotein YbaY K09914 K09914; putative lipoprotein D PAGR_g2193 maltose operon periplasmic protein MalM K05775 malM; maltose operon periplasmic protein D PAGR_g4024 phosphate-starvation-inducible protein E PsiE K13256 psiE; protein PsiE D PAGR_g0998 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D PAGR_g0827 Stress-induced protein YmdF K06884 K06884; uncharacterized protein D PAGR_g0162 Stress-induced protein YmdF K06884 K06884; uncharacterized protein D PAGR_g2355 Stress-induced protein YmdF K06884 K06884; uncharacterized protein D PAGR_g0508 esterase YjfP K06889 K06889; uncharacterized protein D PAGR_g2932 putative permease YbhL K06890 K06890; uncharacterized protein D PAGR_g0625 baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W D PAGR_g0674 phage baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W D PAGR_g0685 Late control protein D K06905 D; Bacteriophage probable baseplate hub protein D PAGR_g0636 Late control protein D K06905 D; Bacteriophage probable baseplate hub protein D PAGR_g0684 phage tail protein K06906 gpU; phage tail protein D PAGR_g0635 putative prophage tail protein K06906 gpU; phage tail protein D PAGR_g0679 phagemajor tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein D PAGR_g0630 major tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein D PAGR_g0680 phage major tail tube protein FII K06908 FII; Bacteriophage tail tube protein D PAGR_g0631 major tail tube protein FII K06908 FII; Bacteriophage tail tube protein D PAGR_g2083 ATPase YcjX K06918 K06918; uncharacterized protein D PAGR_g2746 CoA-binding protein YccU K06929 K06929; uncharacterized protein D PAGR_g2373 hypothetical protein K06938 K06938; uncharacterized protein D PAGR_g1465 proteinase inhibitor YeiW K06940 K06940; uncharacterized protein D PAGR_g2021 ferredoxin YkgJ K06940 K06940; uncharacterized protein D PAGR_g2848 small GTP-binding protein YeeP K06946 K06946; uncharacterized protein D PAGR_g1718 metal dependent phosphohydrolase YedJ K06950 K06950; uncharacterized protein D PAGR_g2420 proton/sodium-glutamate symport protein YdjN K06956 K06956; uncharacterized protein D PAGR_g3669 photosystem I assembly famlily protein BtpA K06971 K06971; uncharacterized protein D PAGR_g1550 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein D PAGR_p162 hypothetical protein K06995 K06995; uncharacterized protein D PAGR_g0709 esterase YqiA K07000 K07000; uncharacterized protein D PAGR_g2648 conserved hypothetical protein YcfP K07000 K07000; uncharacterized protein D PAGR_g1448 sulfatase YejM K07014 K07014; uncharacterized protein D PAGR_g0385 hydrolase alpha/beta Fold family YheT K07019 K07019; uncharacterized protein D PAGR_g4139 glyoxalase family protein K07032 K07032; uncharacterized protein D PAGR_g3535 GPR1/FUN34/yaaH family protein K07034 K07034; uncharacterized protein D PAGR_g3601 conserved metal-binding protein YecA K07039 K07039; uncharacterized protein D PAGR_g1219 metalloprotease YpfJ K07054 K07054; uncharacterized protein D PAGR_g0395 putative metal-binding family protein YheV K07070 K07070; uncharacterized protein D PAGR_g1373 sugar nucleotide epimerase YfcH K07071 K07071; uncharacterized protein D PAGR_g1341 putative permease YfcA K07090 K07090; uncharacterized protein D PAGR_g0541 hypothetical protein K07090 K07090; uncharacterized protein D PAGR_g3935 putative permease K07090 K07090; uncharacterized protein D PAGR_p224 transcriptional regulator YtfJ K07109 K07109; uncharacterized protein D PAGR_g0518 putative transcriptional regulator YtfJ K07109 K07109; uncharacterized protein D PAGR_g3937 YeeE/YedE family membrane protein K07112 K07112; uncharacterized protein D PAGR_g3938 YeeE/YedE family membrane protein K07112 K07112; uncharacterized protein D PAGR_g4107 putative ammonia monooxygenase AbrB K07120 K07120; uncharacterized protein D PAGR_g0558 Penicillin-binding protein activator LpoA K07121 K07121; uncharacterized protein D PAGR_g1888 inner membrane protein YecN K07136 K07136; uncharacterized protein D PAGR_g2764 iron-sulfur protein YcbX K07140 K07140; MOSC domain-containing protein D PAGR_g1486 putative membrane protein YeiB K07148 K07148; uncharacterized protein D PAGR_g4184 alpha-hemolysin K08998 K08998; uncharacterized protein D PAGR_g3933 hypothetical protein K09004 K09004; uncharacterized protein D PAGR_g3038 putative lipoate regulatory protein YbeD K09158 K09158; uncharacterized protein D PAGR_g1970 putative cytoplasmic protein YcgN K09160 K09160; uncharacterized protein D PAGR_g1387 YfbU family protein K09161 K09161; uncharacterized protein D PAGR_g4001 conserved hypothetical protein K09702 K09702; uncharacterized protein D PAGR_p111 hemolysin protein YoaF K09712 K09712; uncharacterized protein D PAGR_g3262 toxin-antitoxin system, toxin component, PIN family K09768 K09768; uncharacterized protein D PAGR_g3793 YCII-like protein K09780 K09780; uncharacterized protein D PAGR_g2016 YciI-like protein K09780 K09780; uncharacterized protein D PAGR_g1724 putative methyl-independent mismatch repair protein YedI K09781 K09781; uncharacterized protein D PAGR_g1980 3-dehydroquinate dehydratase YeaH K09786 K09786; uncharacterized protein D PAGR_g3180 Inner membrane protein YbaN K09790 K09790; uncharacterized protein D PAGR_g2788 tetraacyldisaccharide 4'-kinase YcaR K09791 K09791; uncharacterized protein D PAGR_g0150 periplasmic protein YibQ K09798 K09798; uncharacterized protein D PAGR_g1116 TGS domain protein YfjF K09801 K09801; uncharacterized protein D PAGR_g1579 alpha helix protein YeeX K09802 K09802; uncharacterized protein D PAGR_g0883 oxidative stress defense protein YggE K09807 K09807; uncharacterized protein D PAGR_g4168 virulence protein YbjX K09824 virK; uncharacterized protein D PAGR_g2572 conserved hypothetical protein K09822 K09822; uncharacterized protein D PAGR_g2759 lipoprotein YmbA K09857 K09857; uncharacterized protein D PAGR_g3539 conserved hypothetical protein YaaA K09861 K09861; uncharacterized protein D PAGR_g3469 zinc-binding protein YacG K09862 K09862; uncharacterized protein D PAGR_g4052 glutamine--fructose-6-phosphate transaminase YjaG K09891 K09891; uncharacterized protein D PAGR_g0096 Der GTPase activator YihI K09894 K09894; uncharacterized protein D PAGR_g0889 YecA family protein K09895 K09895; uncharacterized protein D PAGR_g0091 YihD K09896 K09896; uncharacterized protein D PAGR_g0202 hypothetical protein K09897 K09897; uncharacterized protein D PAGR_g0384 phosphopyruvate hydratase K09898 K09898; uncharacterized protein D PAGR_g1386 conserved inner membrane protein YfbV K09899 K09899; uncharacterized protein D PAGR_g2012 dsDNA-mimic protein YciU K09901 K09901; uncharacterized protein D PAGR_g1968 YcgL domain-containing protein K09902 K09902; uncharacterized protein D PAGR_g1449 cytoplasmic protein YejL K09904 K09904; uncharacterized protein D PAGR_g1881 putative metal-binding protein YecM K09907 K09907; uncharacterized protein D PAGR_g3766 cytochrome d ubiquinol oxidase subunit III YhcB K09908 K09908; uncharacterized protein D PAGR_g2747 conserved hypothetical protein YccT K09909 K09909; uncharacterized protein D PAGR_g3449 conserved hypothetical protein YacL K09910 K09910; uncharacterized protein D PAGR_g2755 putative dehydrogenase YcbG K09911 K09911; uncharacterized protein D PAGR_g2294 Nucleoprotein/polynucleotide-associated enzyme YaiL K09912 K09912; uncharacterized protein D PAGR_g2689 multidrug resistance protein A YceH K09915 K09915; uncharacterized protein D PAGR_g1987 cytoplasmic protein YeaC K09916 K09916; uncharacterized protein D PAGR_g1957 putative cytoplasmic protein YoaH K09917 K09917; uncharacterized protein D PAGR_p052 SOS regulon DNA damage-inducible protein K09918 K09918; uncharacterized protein D PAGR_g0239 hypothetical protein K09919 K09919; uncharacterized protein D PAGR_g0707 putative dehydrogenase YqiB K09920 K09920; uncharacterized protein D PAGR_g4112 putative cytoplasmic protein YigA K09921 K09921; uncharacterized protein D PAGR_g0853 cytoplasmic protein YggL K09923 K09923; uncharacterized protein D PAGR_g2789 putative cytoplasmic protein YcaQ K09927 K09927; uncharacterized protein D PAGR_g0500 hypothetical protein K09937 K09937; uncharacterized protein D PAGR_g3261 putative periplasmic ligand-binding sensor protein K09945 K09945; uncharacterized protein D PAGR_g1829 hypothetical protein K09946 K09946; uncharacterized protein D PAGR_g1267 cytoplasmic protein YpeBYpeB K09954 K09954; uncharacterized protein D PAGR_g1212 hypothetical protein K09955 K09955; uncharacterized protein D PAGR_p061 response regulator receiver domain-containing protein K09958 K09958; uncharacterized protein D PAGR_g3114 hypothetical protein K09960 K09960; uncharacterized protein D PAGR_g1833 putative phage head protein/prohead protease K09960 K09960; uncharacterized protein D PAGR_g3116 HI1409 family phage-associated protein K09961 K09961; uncharacterized protein D PAGR_g1831 phage-associated protein, HI1409 family K09961 K09961; uncharacterized protein D PAGR_p154 urea carboxylase-associated protein 2 K09967 K09967; uncharacterized protein D PAGR_p153 urea carboxylase-associated protein 1 K09967 K09967; uncharacterized protein D PAGR_g3167 putative ligase YbaP K09973 K09973; uncharacterized protein D PAGR_g2891 putative cold inducible protein Ves K09975 K09975; uncharacterized protein D PAGR_g2098 putative secreted protein YdbL K09978 K09978; uncharacterized protein D PAGR_g3708 pyridoxamine 5'-phosphate oxidase YhbP K09979 K09979; uncharacterized protein D PAGR_g1932 putative urease-associated protein K09984 K09984; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 3, 2024