+D GENES KO
#
KEGG Orthology (KO) - Pseudemcibacter aquimaris
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:paqi00010]
D KW060_10825 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D KW060_12380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D KW060_14735 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D KW060_03735 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D KW060_03235 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KW060_08705 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D KW060_01385 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KW060_01380 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D KW060_14535 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D KW060_08690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KW060_09235 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D KW060_02465 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D KW060_14090 hypothetical protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D KW060_06660 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KW060_06665 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D KW060_06670 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D KW060_04760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_06675 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14660 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_09400 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D KW060_09395 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D KW060_14845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KW060_07640 zinc-binding alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_14085 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_01155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KW060_10405 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:paqi00020]
D KW060_05510 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D KW060_00220 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D KW060_05195 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D KW060_14670 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D KW060_14665 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D KW060_04760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_06675 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14660 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_09400 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D KW060_09395 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D KW060_14675 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D KW060_14680 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D KW060_00375 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D KW060_00370 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D KW060_00385 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D KW060_00380 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D KW060_13055 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D KW060_14685 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KW060_07580 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D KW060_10405 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D KW060_14090 hypothetical protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D KW060_06660 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KW060_06665 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D KW060_06670 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:paqi00030]
D KW060_10835 glucose-6-phosphate dehydrogenase (NADP(+)) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D KW060_10830 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D KW060_12475 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D KW060_15585 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D KW060_01390 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D KW060_14600 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D KW060_03990 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D KW060_06070 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D KW060_12945 PQQ-binding-like beta-propeller repeat protein K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D KW060_13995 PQQ-binding-like beta-propeller repeat protein K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D KW060_14005 PQQ-binding-like beta-propeller repeat protein K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D KW060_14015 PQQ-binding-like beta-propeller repeat protein K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D KW060_04940 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D KW060_03235 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KW060_03735 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D KW060_14735 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:paqi00040]
D KW060_15585 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D KW060_00750 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D KW060_02570 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:paqi00051]
D KW060_03365 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D KW060_02535 SDR family oxidoreductase K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]
D KW060_00750 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D KW060_14735 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D KW060_03735 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D KW060_03235 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KW060_08705 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D KW060_03990 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D KW060_10380 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:paqi00052]
D KW060_10825 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D KW060_12380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D KW060_14735 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism
D KW060_10825 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D KW060_12380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:paqi00520]
D KW060_03640 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D KW060_07490 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D KW060_10035 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D KW060_01485 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D KW060_07485 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D KW060_05635 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D KW060_10350 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D KW060_12160 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KW060_13155 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D KW060_14930 Gfo/Idh/MocA family oxidoreductase K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D KW060_14935 acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D KW060_14990 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D KW060_14915 tviC; Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D KW060_14910 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D KW060_10825 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D KW060_12380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D KW060_10380 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D KW060_03365 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D KW060_14955 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00620 Pyruvate metabolism [PATH:paqi00620]
D KW060_01155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KW060_09400 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D KW060_09395 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D KW060_14090 hypothetical protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D KW060_06660 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KW060_06665 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D KW060_06670 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D KW060_04760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_06675 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14660 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_07640 zinc-binding alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_14085 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_14845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KW060_09235 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D KW060_15390 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D KW060_09450 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D KW060_09455 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D KW060_02240 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D KW060_03285 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_10575 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D KW060_05505 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D KW060_13510 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D KW060_09045 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D KW060_07580 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D KW060_14685 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KW060_13055 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D KW060_10405 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D KW060_02465 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KW060_02660 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:paqi00630]
D KW060_01155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KW060_14685 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KW060_05510 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D KW060_00220 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KW060_05400 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D KW060_03280 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D KW060_03275 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D KW060_01305 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D KW060_15785 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D KW060_03265 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D KW060_07480 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D KW060_03335 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D KW060_01040 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_05245 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_03995 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D KW060_02145 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D KW060_02140 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D KW060_01100 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_02155 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_13905 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_04760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_06675 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14660 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_02150 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D KW060_04940 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D KW060_14825 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D KW060_14830 NADH-quinone oxidoreductase subunit L K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D KW060_14835 NAD(P)H-dependent oxidoreductase subunit E K00127 fdoI; formate dehydrogenase subunit gamma
D KW060_03570 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D KW060_13900 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D KW060_00485 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:paqi00640]
D KW060_01155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KW060_15110 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D KW060_04760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_06675 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14660 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_12040 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D KW060_15390 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D KW060_09450 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D KW060_09455 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D KW060_02240 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D KW060_01020 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D KW060_00995 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D KW060_03280 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D KW060_03275 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D KW060_05400 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D KW060_01305 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D KW060_14680 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D KW060_14675 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D KW060_00990 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00650 Butanoate metabolism [PATH:paqi00650]
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KW060_14370 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D KW060_14105 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D KW060_12040 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D KW060_00375 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D KW060_00370 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D KW060_00385 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D KW060_00380 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D KW060_01020 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D KW060_12060 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D KW060_09400 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D KW060_09395 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D KW060_10460 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D KW060_01745 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D KW060_01740 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D KW060_09975 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KW060_10290 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KW060_10285 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:paqi00660]
D KW060_09975 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KW060_10290 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KW060_10285 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D KW060_14680 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D KW060_14675 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D KW060_00345 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D KW060_00350 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D KW060_00355 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:paqi00562]
D KW060_09165 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D KW060_02745 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D KW060_00565 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D KW060_00990 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D KW060_08705 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:paqi00190]
D KW060_05315 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D KW060_05320 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D KW060_05325 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D KW060_05330 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D KW060_05335 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D KW060_05340 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D KW060_05345 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D KW060_05350 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D KW060_05355 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D KW060_05360 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D KW060_05365 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D KW060_05370 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D KW060_05375 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D KW060_05380 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D KW060_00375 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D KW060_00370 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D KW060_00385 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D KW060_00380 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D KW060_06010 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D KW060_06015 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D KW060_06020 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D KW060_02340 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D KW060_02350 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D KW060_02335 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D KW060_02330 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D KW060_02345 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D KW060_06275 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D KW060_01920 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D KW060_01915 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D KW060_01910 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D KW060_01905 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D KW060_00835 cytochrome c family protein K08738 CYC; cytochrome c
D KW060_04955 cytochrome c family protein K08738 CYC; cytochrome c
D KW060_14585 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D KW060_14575 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D KW060_14580 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D KW060_14590 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D KW060_14570 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D KW060_02410 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D KW060_02420 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D KW060_02425 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D KW060_02415 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D KW060_02085 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D KW060_06550 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:paqi00710]
D KW060_01380 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D KW060_01385 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KW060_03235 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KW060_03735 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D KW060_01390 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D KW060_03990 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D KW060_08705 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D KW060_15585 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D KW060_14600 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D KW060_10405 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D KW060_02465 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D KW060_09045 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D KW060_14685 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:paqi00720]
D KW060_02465 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D KW060_07580 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D KW060_14685 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KW060_13055 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D KW060_00375 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D KW060_00370 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D KW060_00385 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D KW060_00380 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D KW060_14675 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D KW060_14680 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KW060_09400 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D KW060_09395 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D KW060_05195 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D KW060_00220 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D KW060_15390 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D KW060_09450 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D KW060_09455 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D KW060_02240 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D KW060_05400 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D KW060_01305 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D KW060_03820 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D KW060_00165 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D KW060_01290 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D KW060_01155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:paqi00680]
D KW060_14845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KW060_14840 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D KW060_14825 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D KW060_14830 NADH-quinone oxidoreductase subunit L K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D KW060_14835 NAD(P)H-dependent oxidoreductase subunit E K00127 fdoI; formate dehydrogenase subunit gamma
D KW060_03995 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D KW060_03335 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D KW060_04940 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D KW060_08690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KW060_14685 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KW060_03235 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KW060_03735 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D KW060_14735 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D KW060_01155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KW060_14535 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D KW060_01510 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KW060_09155 glyoxylate/hydroxypyruvate reductase A K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KW060_01505 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D KW060_10300 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:paqi00910]
D KW060_15670 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D KW060_15660 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D KW060_05865 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D KW060_11080 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D KW060_15605 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D KW060_01040 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_05245 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_00105 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D KW060_00100 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:paqi00920]
D KW060_14925 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D KW060_14920 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D KW060_01550 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D KW060_12305 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D KW060_00885 molybdopterin oxidoreductase family protein K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D KW060_00890 4Fe-4S dicluster domain-containing protein K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D KW060_00895 dimethyl sulfoxide reductase anchor subunit K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D KW060_01715 soxC; sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC
D KW060_01710 c-type cytochrome K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D KW060_12295 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D KW060_07915 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D KW060_03890 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D KW060_02595 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D KW060_02600 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D KW060_08825 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D KW060_09120 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D KW060_14395 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D KW060_12540 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D KW060_02620 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D KW060_00605 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D KW060_12925 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:paqi00061]
D KW060_15390 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D KW060_09450 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D KW060_09455 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D KW060_02240 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D KW060_08840 acyl carrier protein K02078 acpP; acyl carrier protein
D KW060_08850 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D KW060_04060 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D KW060_08835 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D KW060_07545 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_08845 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_15070 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_05500 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D KW060_12870 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D KW060_15320 nitronate monooxygenase family protein K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D KW060_12920 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:paqi00071]
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KW060_12035 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KW060_12560 pcaF; 3-oxoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KW060_12040 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D KW060_14105 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D KW060_14160 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D KW060_03760 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D KW060_12920 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D KW060_14260 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D KW060_14845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KW060_07640 zinc-binding alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_14085 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:paqi00561]
D KW060_04940 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_04055 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D KW060_03455 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D KW060_00155 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D KW060_14420 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:paqi00564]
D KW060_15700 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D KW060_03455 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D KW060_00155 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D KW060_14420 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D KW060_09810 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D KW060_07710 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D KW060_14260 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D KW060_05475 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D KW060_05225 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D KW060_05220 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D KW060_07600 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D KW060_05685 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:paqi00592]
D KW060_12035 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KW060_12560 pcaF; 3-oxoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:paqi01040]
D KW060_05665 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D KW060_09490 hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:paqi00230]
D KW060_06070 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D KW060_08930 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D KW060_02040 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D KW060_06530 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D KW060_07305 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D KW060_07315 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D KW060_07310 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D KW060_06535 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D KW060_13470 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D KW060_13465 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D KW060_07320 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D KW060_07330 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D KW060_15595 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D KW060_06030 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D KW060_06075 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D KW060_09025 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D KW060_08750 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D KW060_10685 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D KW060_10970 xanthine dehydrogenase family protein molybdopterin-binding subunit K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D KW060_10975 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D KW060_09015 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D KW060_08800 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D KW060_00115 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D KW060_09480 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D KW060_00120 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D KW060_03625 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D KW060_04285 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D KW060_06250 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D KW060_06555 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D KW060_01520 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D KW060_01410 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D KW060_03210 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D KW060_05750 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D KW060_14925 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D KW060_14920 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:paqi00240]
D KW060_13585 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KW060_13590 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KW060_03465 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D KW060_02700 amidohydrolase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D KW060_03460 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D KW060_14880 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D KW060_09905 tRNA-dihydrouridine synthase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D KW060_02945 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D KW060_04290 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D KW060_02260 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D KW060_05460 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D KW060_08750 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D KW060_05750 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D KW060_12120 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D KW060_15470 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D KW060_08695 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D KW060_02280 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D KW060_12015 AAA family ATPase K00876 udk; uridine kinase [EC:2.7.1.48]
D KW060_02510 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D KW060_01410 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D KW060_12165 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D KW060_00115 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D KW060_09480 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D KW060_00120 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D KW060_05965 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D KW060_15800 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D KW060_13040 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D KW060_15085 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D KW060_12755 hydantoinase/carbamoylase family amidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:paqi00250]
D KW060_05535 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KW060_14895 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D KW060_00195 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D KW060_14180 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D KW060_03335 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D KW060_09050 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D KW060_14630 hypothetical protein K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D KW060_03515 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D KW060_06775 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KW060_14465 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KW060_01520 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D KW060_07330 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D KW060_03465 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D KW060_01020 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D KW060_12060 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D KW060_00105 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D KW060_00100 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D KW060_15605 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D KW060_00685 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D KW060_01040 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_05245 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_13585 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KW060_13590 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KW060_07310 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D KW060_07490 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D KW060_10035 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D KW060_08930 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:paqi00260]
D KW060_15325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KW060_00360 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KW060_03730 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D KW060_02170 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D KW060_02365 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D KW060_13020 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D KW060_13010 hypothetical protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D KW060_03995 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D KW060_03335 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D KW060_04940 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D KW060_14535 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D KW060_01510 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KW060_09155 glyoxylate/hydroxypyruvate reductase A K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KW060_01505 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D KW060_10300 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D KW060_00145 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D KW060_00140 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D KW060_03955 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D KW060_02145 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D KW060_02140 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D KW060_01100 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_02155 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_13905 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_04760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_06675 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14660 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_02150 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D KW060_05225 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D KW060_00680 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D KW060_03700 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D KW060_03935 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D KW060_04830 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D KW060_06365 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D KW060_02245 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D KW060_02250 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D KW060_10740 hypothetical protein K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
D KW060_10745 aminotransferase class V-fold PLP-dependent enzyme K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:paqi00270]
D KW060_02595 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D KW060_02600 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D KW060_08825 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D KW060_09120 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D KW060_03885 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_02590 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06210 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06240 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06245 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06450 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_01295 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D KW060_01300 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D KW060_15720 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D KW060_00755 MTAP family purine nucleoside phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D KW060_06025 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D KW060_06075 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D KW060_00760 hypothetical protein K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D KW060_10135 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D KW060_00745 PLP-dependent aspartate aminotransferase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D KW060_02520 PLP-dependent aspartate aminotransferase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D KW060_11065 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D KW060_12025 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D KW060_01230 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D KW060_10365 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D KW060_15325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KW060_00360 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KW060_03730 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D KW060_14395 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D KW060_12540 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D KW060_02620 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D KW060_06115 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KW060_02110 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D KW060_10660 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D KW060_05535 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KW060_14895 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D KW060_03890 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D KW060_06365 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D KW060_14685 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D KW060_07430 D-cysteine desulfhydrase family protein K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]
D KW060_07435 D-cysteine desulfhydrase family protein K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]
D KW060_14185 D-cysteine desulfhydrase family protein K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]
D KW060_00680 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D KW060_01510 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KW060_09155 glyoxylate/hydroxypyruvate reductase A K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KW060_01505 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:paqi00280]
D KW060_06115 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KW060_03565 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D KW060_04760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_06675 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14660 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14160 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D KW060_10455 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D KW060_12040 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D KW060_12035 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KW060_12560 pcaF; 3-oxoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KW060_03280 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D KW060_03275 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D KW060_05400 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D KW060_01305 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D KW060_00080 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D KW060_00990 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_04895 AMP-binding protein K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D KW060_00995 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D KW060_01020 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D KW060_10465 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D KW060_10475 acyl-CoA carboxylase subunit beta K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D KW060_10470 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D KW060_10460 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D KW060_01745 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D KW060_01740 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:paqi00290]
D KW060_03700 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D KW060_03935 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D KW060_04830 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D KW060_00345 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D KW060_00350 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D KW060_00355 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D KW060_09975 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KW060_10290 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KW060_10285 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D KW060_10280 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D KW060_13015 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D KW060_06115 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KW060_03565 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D KW060_02660 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:paqi00300]
D KW060_03730 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D KW060_15325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KW060_00360 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KW060_06225 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KW060_15090 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KW060_06230 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D KW060_06220 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D KW060_10240 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D KW060_06215 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D KW060_07505 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D KW060_14890 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D KW060_14455 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D KW060_12350 saccharopine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D KW060_13185 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D KW060_13180 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:paqi00310]
D KW060_12350 saccharopine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D KW060_14335 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D KW060_14665 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D KW060_04760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_06675 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14660 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_03760 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D KW060_12040 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KW060_06365 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D KW060_01020 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D KW060_12060 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D KW060_03755 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D KW060_13950 FAD-binding oxidoreductase K26065 amaA; L-pipecolate oxidase
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:paqi00220]
D KW060_10245 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D KW060_03515 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D KW060_06775 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KW060_14465 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KW060_04330 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D KW060_07310 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D KW060_01040 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_05245 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_13585 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KW060_13590 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KW060_15605 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D KW060_05535 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KW060_14895 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D KW060_15380 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D KW060_13385 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D KW060_06405 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D KW060_10240 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D KW060_02655 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:paqi00330]
D KW060_11130 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D KW060_13340 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D KW060_01050 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D KW060_01025 NAD(P)-binding protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D KW060_09880 NAD(P)/FAD-dependent oxidoreductase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D KW060_10635 NAD(P)/FAD-dependent oxidoreductase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D KW060_12085 NAD(P)-binding protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_01045 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D KW060_06950 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D KW060_03815 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KW060_10130 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KW060_01055 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D KW060_01070 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D KW060_15625 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D KW060_09920 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D KW060_04330 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D KW060_04325 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D KW060_06100 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D KW060_12340 NAD(P)-binding domain-containing protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D KW060_00685 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D KW060_12680 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D KW060_14510 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D KW060_14515 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D KW060_05535 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KW060_14895 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:paqi00340]
D KW060_12145 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D KW060_01515 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D KW060_01845 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D KW060_03865 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D KW060_01835 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D KW060_01825 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D KW060_01840 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D KW060_01820 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D KW060_08450 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09915 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09940 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10315 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10325 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10330 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10555 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_14400 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_12140 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D KW060_00480 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D KW060_00475 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D KW060_00460 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D KW060_00465 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D KW060_00485 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:paqi00350]
D KW060_05535 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KW060_14895 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D KW060_08450 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09915 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09940 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10315 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10325 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10330 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10555 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_14400 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_13130 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D KW060_12610 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D KW060_00515 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D KW060_14845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KW060_07640 zinc-binding alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_14085 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_09985 hpaB; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D KW060_12620 flavin reductase K23470 C1-hpah; 4-hydroxyphenylacetate 3-hydroxylase, reductase component [EC:1.5.1.36]
D KW060_12060 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D KW060_06690 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
D KW060_12615 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:paqi00360]
D KW060_07975 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D KW060_14370 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D KW060_05535 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KW060_14895 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D KW060_08450 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09915 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09940 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10315 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10325 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10330 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10555 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_14400 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_13130 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D KW060_12650 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D KW060_03815 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KW060_10130 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:paqi00380]
D KW060_08215 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D KW060_03570 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D KW060_03575 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D KW060_12515 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D KW060_10600 amidohydrolase family protein K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D KW060_10605 amidohydrolase family protein K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D KW060_12510 amidohydrolase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D KW060_12525 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D KW060_12520 RidA family protein K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5]
D KW060_14665 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D KW060_04760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_06675 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14660 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_03760 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D KW060_12040 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_05865 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D KW060_11080 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D KW060_03815 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KW060_10130 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:paqi00400]
D KW060_07210 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D KW060_15415 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D KW060_09445 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D KW060_15465 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D KW060_15410 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D KW060_02285 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D KW060_12875 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D KW060_08715 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D KW060_06175 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D KW060_06170 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D KW060_02255 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D KW060_06165 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D KW060_02245 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D KW060_02250 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D KW060_02755 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D KW060_14405 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D KW060_00830 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D KW060_05535 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KW060_14895 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D KW060_08450 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09915 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09940 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10315 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10325 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10330 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10555 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_14400 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_07975 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:paqi00410]
D KW060_01020 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D KW060_01025 NAD(P)-binding protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D KW060_09880 NAD(P)/FAD-dependent oxidoreductase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D KW060_10635 NAD(P)/FAD-dependent oxidoreductase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D KW060_12085 NAD(P)-binding protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_02805 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D KW060_15085 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D KW060_12755 hydantoinase/carbamoylase family amidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D KW060_00995 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D KW060_12040 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D KW060_00990 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:paqi00430]
D KW060_10205 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_10210 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_10225 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_12400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_12740 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_09050 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D KW060_15605 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D KW060_05990 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:paqi00450]
D KW060_12540 cystathionine gamma-synthase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D KW060_03885 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_02590 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06210 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06240 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06245 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06450 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_01295 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D KW060_01300 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D KW060_00745 PLP-dependent aspartate aminotransferase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D KW060_02520 PLP-dependent aspartate aminotransferase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D KW060_11065 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D KW060_12025 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D KW060_15555 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D KW060_02710 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D KW060_05550 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D KW060_14925 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D KW060_14920 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D KW060_15050 hypothetical protein K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D KW060_15055 aminotransferase class V-fold PLP-dependent enzyme K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D KW060_05980 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:paqi00460]
D KW060_05865 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D KW060_11080 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D KW060_10205 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_10210 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_10225 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_12400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_12740 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_14180 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D KW060_03995 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:paqi00470]
D KW060_04815 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KW060_08905 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KW060_13150 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KW060_06365 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D KW060_07310 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D KW060_06480 DUF1611 domain-containing protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D KW060_11950 DUF1611 domain-containing protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D KW060_07405 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D KW060_11955 ycjG; L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D KW060_14890 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D KW060_14455 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D KW060_00455 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D KW060_02565 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D KW060_00975 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D KW060_12650 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:paqi00480]
D KW060_10205 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_10210 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_10225 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_12400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_12740 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_13260 hydantoinase B/oxoprolinase family protein K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D KW060_02110 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D KW060_10660 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D KW060_00850 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D KW060_08770 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D KW060_12345 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D KW060_08235 hypothetical protein K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D KW060_09745 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D KW060_00855 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_02380 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_07065 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_07250 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_12265 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_13695 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_07205 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D KW060_05195 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D KW060_12475 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D KW060_10835 glucose-6-phosphate dehydrogenase (NADP(+)) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D KW060_04875 isoaspartyl peptidase/L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
D KW060_07335 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:paqi00541]
D KW060_02750 NTP transferase domain-containing protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D KW060_02990 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D KW060_02985 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D KW060_02995 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D KW060_03000 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D KW060_03365 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D KW060_14955 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D KW060_07485 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D KW060_14910 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D KW060_14930 Gfo/Idh/MocA family oxidoreductase K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D KW060_14935 acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D KW060_14990 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D KW060_14915 tviC; Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:paqi00550]
D KW060_12160 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KW060_13155 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D KW060_13160 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D KW060_11915 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53]
D KW060_11910 hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23]
D KW060_13185 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D KW060_13150 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KW060_13180 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D KW060_05470 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D KW060_10940 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KW060_13175 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D KW060_13165 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D KW060_00030 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KW060_05575 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KW060_02680 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D KW060_13190 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D KW060_05960 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:paqi00552]
D KW060_10940 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KW060_12640 glycosyltransferase family 2 protein K25618 gtlA; lipoteichoic acid polyisoprenyl-phosphate galactosyltransferase [EC:2.4.-.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:paqi00543]
D KW060_02595 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:paqi00730]
D KW060_03475 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D KW060_01490 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D KW060_05645 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KW060_05650 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KW060_12900 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D KW060_09435 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D KW060_00410 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D KW060_02230 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D KW060_04030 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D KW060_09495 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KW060_09500 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KW060_03210 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:paqi00740]
D KW060_14815 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D KW060_04015 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D KW060_04005 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D KW060_04020 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D KW060_04010 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D KW060_01985 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D KW060_12620 flavin reductase K23470 C1-hpah; 4-hydroxyphenylacetate 3-hydroxylase, reductase component [EC:1.5.1.36]
D KW060_13450 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:paqi00750]
D KW060_12850 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D KW060_01505 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D KW060_08785 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D KW060_04300 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D KW060_02365 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D KW060_13020 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:paqi00760]
D KW060_00195 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D KW060_12820 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D KW060_12825 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D KW060_14520 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D KW060_05750 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D KW060_00825 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D KW060_07215 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D KW060_05680 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D KW060_13860 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D KW060_04140 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D KW060_09280 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D KW060_09285 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D KW060_09290 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D KW060_12060 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:paqi00770]
D KW060_09975 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KW060_10290 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D KW060_10285 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D KW060_10280 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D KW060_13015 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D KW060_02810 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D KW060_02805 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D KW060_05390 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D KW060_15805 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D KW060_05750 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D KW060_09530 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D KW060_15460 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D KW060_04305 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D KW060_06115 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KW060_15085 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D KW060_12755 hydantoinase/carbamoylase family amidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:paqi00780]
D KW060_08835 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D KW060_07545 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_08845 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_15070 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_05500 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D KW060_12870 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D KW060_04200 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D KW060_05385 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:paqi00785]
D KW060_03295 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D KW060_06680 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D KW060_04760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_06675 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14660 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14090 hypothetical protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D KW060_06660 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D KW060_06665 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D KW060_06670 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D KW060_14670 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D KW060_14665 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D KW060_02145 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D KW060_02140 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D KW060_01100 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_02155 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_13905 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_02150 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:paqi00790]
D KW060_02630 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D KW060_09495 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KW060_09500 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KW060_14230 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D KW060_07610 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D KW060_04275 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D KW060_01480 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D KW060_13035 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D KW060_02235 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D KW060_14815 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D KW060_04015 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D KW060_10905 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D KW060_14805 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D KW060_07965 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D KW060_07975 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D KW060_07655 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D KW060_07660 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D KW060_03895 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D KW060_00800 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D KW060_06160 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D KW060_07590 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D KW060_07350 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D KW060_06155 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D KW060_03530 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D KW060_15340 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:paqi00670]
D KW060_13035 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D KW060_03820 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D KW060_00165 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D KW060_03995 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D KW060_06530 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D KW060_15595 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D KW060_13305 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D KW060_01100 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_02155 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_13905 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D KW060_01295 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D KW060_01300 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D KW060_13040 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D KW060_13900 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D KW060_01290 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D KW060_01405 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:paqi00860]
D KW060_03955 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D KW060_05515 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KW060_07220 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KW060_12565 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D KW060_03945 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D KW060_15690 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D KW060_15685 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D KW060_15480 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D KW060_06800 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D KW060_00505 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D KW060_15490 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D KW060_15485 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D KW060_12285 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D KW060_02340 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D KW060_06275 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D KW060_10515 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D KW060_10520 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D KW060_00905 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D KW060_02950 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D KW060_05780 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:paqi00130]
D KW060_14110 hypothetical protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D KW060_02095 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D KW060_02080 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D KW060_13450 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D KW060_15330 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D KW060_14770 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D KW060_15815 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D KW060_00950 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D KW060_13130 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:paqi00900]
D KW060_12900 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D KW060_05480 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D KW060_05690 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D KW060_07450 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D KW060_15300 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D KW060_02165 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KW060_13450 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D KW060_12905 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D KW060_02435 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D KW060_05470 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:paqi00906]
D KW060_09590 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:paqi00907]
D KW060_12040 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D KW060_10460 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D KW060_12035 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KW060_12560 pcaF; 3-oxoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D KW060_01390 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:paqi00523]
D KW060_02750 NTP transferase domain-containing protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D KW060_02990 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D KW060_02985 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D KW060_02995 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D KW060_03000 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D KW060_06620 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:paqi01055]
D KW060_03495 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D KW060_02985 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D KW060_08095 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D KW060_13980 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:paqi00332]
D KW060_14510 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D KW060_14515 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:paqi00261]
D KW060_03495 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D KW060_14925 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D KW060_14920 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D KW060_15325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KW060_00360 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KW060_06225 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KW060_15090 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KW060_06230 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:paqi00521]
D KW060_10825 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D KW060_12380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D KW060_02745 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D KW060_09165 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D KW060_02750 NTP transferase domain-containing protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D KW060_02990 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D KW060_02985 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D KW060_02995 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D KW060_03000 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D KW060_10825 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D KW060_12380 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:paqi00525]
D KW060_02750 NTP transferase domain-containing protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D KW060_02990 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D KW060_02985 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:paqi00401]
D KW060_14405 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D KW060_05535 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KW060_14895 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D KW060_08450 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09915 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09940 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10315 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10325 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10330 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10555 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_14400 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D KW060_08715 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D KW060_06175 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D KW060_08850 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D KW060_07545 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_08845 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_15070 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_12870 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D KW060_08840 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:paqi00999]
D KW060_15720 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D KW060_15465 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:paqi00362]
D KW060_12575 3-oxoacid CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D KW060_12570 3-oxoacid CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D KW060_12035 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KW060_12560 pcaF; 3-oxoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KW060_12525 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D KW060_05920 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D KW060_05915 hypothetical protein K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D KW060_00665 2Fe-2S iron-sulfur cluster binding domain-containing protein K04755 fdx; ferredoxin, 2Fe-2S
D KW060_14110 hypothetical protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D KW060_12040 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D KW060_14105 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D KW060_03760 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D KW060_14370 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:paqi00627]
D KW060_03815 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KW060_10130 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KW060_05865 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D KW060_11080 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D KW060_03285 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D KW060_05525 thiamine pyrophosphate-binding protein K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D KW060_13450 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D KW060_14125 AMP-binding protein K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D KW060_14115 hypothetical protein K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
C 00364 Fluorobenzoate degradation [PATH:paqi00364]
D KW060_10200 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:paqi00625]
D KW060_07640 zinc-binding alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_14085 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_14845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D KW060_05790 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D KW060_07540 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:paqi00361]
D KW060_10200 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:paqi00623]
D KW060_10200 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D KW060_12525 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D KW060_12035 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D KW060_12560 pcaF; 3-oxoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:paqi00643]
D KW060_12610 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D KW060_00515 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D KW060_03815 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KW060_10130 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D KW060_05865 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D KW060_11080 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:paqi00930]
D KW060_12040 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00363 Bisphenol degradation
D KW060_02540 2,4'-dihydroxyacetophenone dioxygenase family protein K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:paqi00626]
D KW060_07640 zinc-binding alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_14085 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D KW060_14845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D KW060_05920 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D KW060_05915 hypothetical protein K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:paqi03020]
D KW060_03070 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D KW060_03075 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D KW060_03225 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D KW060_04280 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:paqi03010]
D KW060_02275 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D KW060_05450 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D KW060_03135 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D KW060_07235 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D KW060_03190 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D KW060_08855 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D KW060_03085 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D KW060_03175 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D KW060_06315 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D KW060_03100 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D KW060_03220 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D KW060_03080 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D KW060_03215 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D KW060_03170 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D KW060_15760 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D KW060_00325 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D KW060_03150 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D KW060_08860 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D KW060_03125 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D KW060_15830 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D KW060_13480 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D KW060_03055 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D KW060_03120 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D KW060_03105 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D KW060_03110 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D KW060_03165 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D KW060_03180 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D KW060_03065 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D KW060_08865 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D KW060_03060 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D KW060_03050 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D KW060_06310 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D KW060_03155 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D KW060_03200 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D KW060_03140 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D KW060_03230 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D KW060_03185 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D KW060_00340 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D KW060_13760 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D KW060_14495 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D KW060_03130 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D KW060_03115 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D KW060_03160 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D KW060_06065 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D KW060_14500 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D KW060_02815 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D KW060_03145 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D KW060_03195 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D KW060_09200 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D KW060_13790 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D KW060_03435 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D KW060_13410 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D KW060_13755 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D KW060_09230 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:paqi00970]
D KW060_03745 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D KW060_05275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KW060_12170 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D KW060_05515 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KW060_07220 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KW060_04380 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D KW060_10260 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D KW060_04385 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D KW060_04375 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D KW060_05185 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KW060_06605 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KW060_02455 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D KW060_02460 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D KW060_13720 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KW060_03675 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D KW060_15050 hypothetical protein K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D KW060_15055 aminotransferase class V-fold PLP-dependent enzyme K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D KW060_07225 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KW060_05980 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D KW060_13305 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D KW060_07940 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D KW060_00425 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KW060_01990 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D KW060_14855 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D KW060_03630 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KW060_05415 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KW060_15295 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D KW060_13765 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D KW060_13770 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D KW060_05630 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KW060_02860 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:paqi03060]
D KW060_03205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KW060_03040 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KW060_08700 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KW060_09635 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D KW060_09630 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D KW060_09640 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KW060_13395 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KW060_15385 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KW060_15450 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D KW060_00320 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D KW060_00300 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D KW060_03660 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D KW060_03670 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D KW060_04310 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KW060_01995 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:paqi04122]
D KW060_05645 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KW060_05650 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KW060_03890 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D KW060_01190 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D KW060_01660 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D KW060_07590 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D KW060_00800 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D KW060_07595 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D KW060_15790 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D KW060_06160 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D KW060_07350 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D KW060_09440 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:paqi03018]
D KW060_14555 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D KW060_05565 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D KW060_08690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KW060_15765 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D KW060_06745 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D KW060_08180 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D KW060_03440 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D KW060_11200 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D KW060_15495 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D KW060_05395 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D KW060_10725 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D KW060_09655 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KW060_05730 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D KW060_06550 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D KW060_06935 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:paqi03030]
D KW060_15455 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KW060_05440 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KW060_00815 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KW060_05975 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KW060_00435 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KW060_08765 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D KW060_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KW060_08900 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D KW060_13600 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D KW060_09575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KW060_02175 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D KW060_09080 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D KW060_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KW060_13105 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:paqi03410]
D KW060_01870 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D KW060_02385 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D KW060_15820 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D KW060_02690 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D KW060_04265 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D KW060_07360 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D KW060_03615 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D KW060_14795 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D KW060_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KW060_03740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KW060_13105 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:paqi03420]
D KW060_04155 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D KW060_09580 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D KW060_05530 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D KW060_07605 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D KW060_13075 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KW060_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KW060_13105 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:paqi03430]
D KW060_02845 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D KW060_02005 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D KW060_13075 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KW060_02045 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D KW060_12910 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D KW060_03740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KW060_09575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KW060_05440 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KW060_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KW060_00815 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KW060_00435 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KW060_05975 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KW060_15455 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KW060_08765 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D KW060_13105 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:paqi03440]
D KW060_03740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KW060_09575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KW060_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D KW060_06140 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D KW060_00805 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D KW060_05180 recA; recombinase RecA K03553 recA; recombination protein RecA
D KW060_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KW060_01425 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D KW060_01430 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D KW060_01420 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D KW060_04165 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D KW060_05440 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KW060_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KW060_00815 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KW060_00435 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KW060_05975 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KW060_15455 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KW060_08765 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D KW060_14595 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:paqi03250]
D KW060_05875 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D KW060_06000 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:paqi02010]
D KW060_01175 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D KW060_01185 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D KW060_01180 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D KW060_12670 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D KW060_12690 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D KW060_06790 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D KW060_04950 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D KW060_09470 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D KW060_08910 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D KW060_08915 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D KW060_10080 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D KW060_10085 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D KW060_10090 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D KW060_10095 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D KW060_04880 transporter substrate-binding domain-containing protein K23061 lhpP; hydroxyproline transporter system substrate-binding protein
D KW060_13120 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D KW060_03880 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D KW060_03875 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D KW060_07775 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D KW060_02060 ABC transporter permease subunit K09696 natB; sodium transport system permease protein
D KW060_02065 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D KW060_05420 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D KW060_05425 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D KW060_00260 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D KW060_00255 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D KW060_00235 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D KW060_00230 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D KW060_04190 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D KW060_04185 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D KW060_10870 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D KW060_14430 hypothetical protein K09811 ftsX; cell division transport system permease protein
D KW060_14435 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D KW060_05215 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D KW060_12600 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D KW060_12090 ATP-binding cassette domain-containing protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C 02060 Phosphotransferase system (PTS) [PATH:paqi02060]
D KW060_10375 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D KW060_10380 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D KW060_15315 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D KW060_10885 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:paqi03070]
D KW060_07950 TolC family outer membrane protein K12340 tolC; outer membrane protein
D KW060_15170 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D KW060_15160 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D KW060_15155 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D KW060_15150 type II secretion system protein K02458 gspI; general secretion pathway protein I
D KW060_15145 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D KW060_15140 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D KW060_15135 hypothetical protein K02461 gspL; general secretion pathway protein L
D KW060_15130 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D KW060_15165 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D KW060_09635 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D KW060_09630 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D KW060_03040 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KW060_08700 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KW060_03205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KW060_09640 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KW060_13395 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KW060_15385 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KW060_00300 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D KW060_15450 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D KW060_00320 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D KW060_03660 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D KW060_03670 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:paqi02020]
D KW060_07475 GHKL domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D KW060_07470 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D KW060_09495 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KW060_09500 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KW060_14230 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D KW060_10080 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D KW060_01340 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D KW060_05025 flagellin K02406 fliC; flagellin
D KW060_05030 flagellin K02406 fliC; flagellin
D KW060_05035 flagellin K02406 fliC; flagellin
D KW060_06825 flagellin K02406 fliC; flagellin
D KW060_10920 flagellin K02406 fliC; flagellin
D KW060_03940 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D KW060_09720 response regulator transcription factor K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D KW060_06275 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D KW060_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D KW060_10395 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D KW060_10400 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI
D KW060_02065 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D KW060_02060 ABC transporter permease subunit K09696 natB; sodium transport system permease protein
D KW060_15670 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D KW060_15660 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D KW060_15665 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D KW060_06335 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D KW060_09740 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D KW060_10595 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D KW060_10485 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D KW060_13560 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D KW060_13565 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D KW060_13550 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D KW060_13545 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D KW060_13535 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D KW060_13265 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D KW060_13530 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D KW060_13525 type II secretion system F family protein K12510 tadB; tight adherence protein B
D KW060_13520 type II secretion system F family protein K12511 tadC; tight adherence protein C
D KW060_02850 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D KW060_05250 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D KW060_05700 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D KW060_05705 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D KW060_01040 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_05245 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_05710 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D KW060_05715 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KW060_10875 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D KW060_01580 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D KW060_03780 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_07930 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_08005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_08365 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_01565 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D KW060_01560 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KW060_12430 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KW060_01570 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_01980 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_12420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_12435 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_01575 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D KW060_03430 PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D KW060_03425 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D KW060_01555 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D KW060_01585 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D KW060_09755 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D KW060_06010 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D KW060_06015 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D KW060_06020 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D KW060_00835 cytochrome c family protein K08738 CYC; cytochrome c
D KW060_04955 cytochrome c family protein K08738 CYC; cytochrome c
D KW060_01920 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D KW060_01915 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D KW060_01910 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D KW060_01905 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D KW060_07950 TolC family outer membrane protein K12340 tolC; outer membrane protein
D KW060_07455 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D KW060_01725 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:paqi04148]
D KW060_04330 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D KW060_06010 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:paqi02024]
D KW060_05730 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D KW060_08715 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D KW060_06175 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D KW060_07210 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D KW060_12920 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D KW060_03870 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D KW060_14475 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D KW060_14815 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D KW060_04005 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D KW060_00650 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D KW060_07520 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KW060_07525 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D KW060_07530 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D KW060_07535 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D KW060_13395 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KW060_03040 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KW060_08700 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KW060_03205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KW060_09640 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KW060_15385 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KW060_00300 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D KW060_15450 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D KW060_00320 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:paqi02030]
D KW060_03780 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_07930 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_08005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_08365 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_01560 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KW060_12430 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KW060_01565 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D KW060_01570 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_01980 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_12420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_12435 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_12440 STAS domain-containing protein K03409 cheX; chemotaxis protein CheX
D KW060_01575 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D KW060_01580 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D KW060_05090 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D KW060_03300 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D KW060_03940 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D KW060_03930 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D KW060_05115 OmpA family protein K02557 motB; chemotaxis protein MotB
D KW060_09185 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:paqi02040]
D KW060_05150 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D KW060_01590 hypothetical protein K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D KW060_01600 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ
D KW060_04035 hypothetical protein K02415 fliL; flagellar protein FliL
D KW060_05085 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D KW060_05090 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D KW060_03300 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D KW060_05130 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D KW060_05125 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D KW060_05155 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D KW060_05160 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D KW060_01625 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D KW060_05165 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D KW060_05140 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D KW060_04150 hypothetical protein K02388 flgC; flagellar basal-body rod protein FlgC
D KW060_05145 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D KW060_01640 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D KW060_01630 hypothetical protein K02390 flgE; flagellar hook protein FlgE
D KW060_05080 flagellar hook basal-body protein K02391 flgF; flagellar basal-body rod protein FlgF
D KW060_05050 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D KW060_05045 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D KW060_01650 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D KW060_01655 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D KW060_05025 flagellin K02406 fliC; flagellin
D KW060_05030 flagellin K02406 fliC; flagellin
D KW060_05035 flagellin K02406 fliC; flagellin
D KW060_06825 flagellin K02406 fliC; flagellin
D KW060_10920 flagellin K02406 fliC; flagellin
D KW060_03940 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D KW060_03930 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D KW060_05115 OmpA family protein K02557 motB; chemotaxis protein MotB
D KW060_09185 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D KW060_13605 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D KW060_10875 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D KW060_08690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:paqi04980]
D KW060_00905 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D KW060_02795 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D KW060_01305 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D KW060_01295 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D KW060_01300 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:paqi01501]
D KW060_02825 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D KW060_03640 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D KW060_10485 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D KW060_04090 RNA ligase RtcB family protein K18148 rtcB; release factor H-coupled RctB family protein
D KW060_12500 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D KW060_12495 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D KW060_00650 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D KW060_07950 TolC family outer membrane protein K12340 tolC; outer membrane protein
D KW060_00030 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KW060_05575 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KW060_02680 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D KW060_13190 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D KW060_01310 blaOXA; class D beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:paqi01502]
D KW060_13150 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KW060_04815 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KW060_08905 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KW060_13180 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D KW060_13175 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D KW060_13165 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:paqi01503]
D KW060_05570 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D KW060_01340 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D KW060_05875 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D KW060_06000 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D KW060_12500 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D KW060_12495 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D KW060_07950 TolC family outer membrane protein K12340 tolC; outer membrane protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:paqi01000]
C 01001 Protein kinases [BR:paqi01001]
D KW060_07475 GHKL domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D KW060_10395 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D KW060_06335 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D KW060_09740 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D KW060_10595 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D KW060_05700 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D KW060_05710 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D KW060_01560 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KW060_12430 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:paqi01009]
D KW060_10365 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D KW060_00210 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D KW060_10300 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:paqi01002]
D KW060_01995 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D KW060_13555 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D KW060_09015 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D KW060_08930 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D KW060_00105 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D KW060_07490 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D KW060_10035 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D KW060_08235 hypothetical protein K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D KW060_09745 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D KW060_14380 hypothetical protein K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D KW060_14870 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D KW060_00850 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D KW060_08770 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D KW060_12345 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D KW060_08485 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D KW060_08490 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D KW060_06215 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D KW060_07505 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D KW060_00875 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D KW060_04110 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D KW060_00625 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D KW060_01475 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D KW060_05485 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D KW060_03320 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D KW060_04820 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D KW060_05820 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D KW060_14325 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D KW060_01340 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D KW060_13220 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D KW060_00390 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D KW060_05960 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D KW060_05285 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D KW060_05295 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D KW060_04435 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D KW060_06150 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D KW060_04310 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KW060_14545 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D KW060_06585 hypothetical protein K08676 tri; tricorn protease [EC:3.4.21.-]
D KW060_08095 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D KW060_13980 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D KW060_02160 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D KW060_05625 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D KW060_01815 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D KW060_14180 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D KW060_10205 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_10210 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_10225 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_12400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_12740 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D KW060_06135 U32 family peptidase C-terminal domain-containing protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D KW060_02075 TldD/PmbA family protein K03592 pmbA; PmbA protein
D KW060_02325 tldD; metalloprotease TldD K03568 tldD; TldD protein
D KW060_01330 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D KW060_10710 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D KW060_01325 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:paqi01003]
D KW060_00030 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KW060_05575 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KW060_12640 glycosyltransferase family 2 protein K25618 gtlA; lipoteichoic acid polyisoprenyl-phosphate galactosyltransferase [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:paqi01011]
D KW060_12160 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KW060_13155 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D KW060_13160 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D KW060_13185 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D KW060_13150 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KW060_04815 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KW060_08905 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KW060_05625 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D KW060_13175 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D KW060_13165 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D KW060_10940 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KW060_02855 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D KW060_00030 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KW060_05575 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KW060_02680 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D KW060_13190 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D KW060_05960 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D KW060_15435 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D KW060_05950 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D KW060_08830 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D KW060_05955 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D KW060_05570 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:paqi01004]
D KW060_08850 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D KW060_04060 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D KW060_08835 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D KW060_07545 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_08845 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_15070 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KW060_05500 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D KW060_12870 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D KW060_15320 nitronate monooxygenase family protein K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D KW060_05665 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D KW060_09490 hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D KW060_01155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D KW060_15110 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D KW060_12920 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D KW060_04215 fatty acyl-AMP ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D KW060_04055 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D KW060_03455 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D KW060_00155 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D KW060_14420 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:paqi01008]
D KW060_03495 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:paqi01006]
D KW060_12905 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D KW060_02435 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D KW060_05470 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D KW060_09590 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D KW060_10295 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D KW060_02095 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D KW060_02340 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:paqi01007]
D KW060_14855 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D KW060_05515 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KW060_07220 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KW060_00940 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D KW060_05630 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KW060_02860 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D KW060_07225 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KW060_03630 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KW060_05980 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D KW060_01990 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D KW060_07940 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D KW060_00425 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KW060_06605 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KW060_15295 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D KW060_02455 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D KW060_02460 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D KW060_03675 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D KW060_05415 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KW060_13720 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KW060_05185 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KW060_13765 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D KW060_13770 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D KW060_05535 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D KW060_14895 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D KW060_03725 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D KW060_06950 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D KW060_08450 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09915 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_09940 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10315 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10325 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10330 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_10555 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_14400 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D KW060_00145 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D KW060_03955 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D KW060_04200 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D KW060_02590 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06210 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06240 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06245 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_06450 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KW060_00995 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D KW060_04325 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D KW060_10240 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D KW060_01020 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D KW060_01050 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D KW060_12565 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D KW060_06115 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KW060_10905 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D KW060_03335 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D KW060_01505 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D KW060_14955 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:paqi00194]
D KW060_14570 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D KW060_14575 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D KW060_14580 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D KW060_14585 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D KW060_14590 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D KW060_02420 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D KW060_02425 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D KW060_02415 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D KW060_02410 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D KW060_02405 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:paqi03000]
D KW060_04240 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D KW060_07075 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D KW060_08405 helix-turn-helix domain-containing protein K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D KW060_12310 gcvA; transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D KW060_13335 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D KW060_06265 hypothetical protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D KW060_11235 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D KW060_12080 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D KW060_10815 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D KW060_00470 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D KW060_03765 csiR; DNA-binding transcriptional regulator CsiR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D KW060_02525 TetR family transcriptional regulator C-terminal domain-containing protein K09017 rutR; TetR/AcrR family transcriptional regulator
D KW060_01115 TetR/AcrR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D KW060_10215 TetR/AcrR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D KW060_04765 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D KW060_00670 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KW060_11190 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KW060_12390 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KW060_12550 Lrp/AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D KW060_03555 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D KW060_07980 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D KW060_13125 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D KW060_13875 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D KW060_02900 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D KW060_03870 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D KW060_14475 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D KW060_15775 transcriptional repressor K09826 irr; Fur family transcriptional regulator, iron response regulator
D KW060_02545 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D KW060_14490 helix-turn-helix domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D KW060_01760 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D KW060_06910 Rrf2 family transcriptional regulator K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator
D KW060_11170 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D KW060_00150 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D KW060_05385 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D KW060_08350 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D KW060_06695 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D KW060_00685 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D KW060_04725 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D KW060_10505 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D KW060_15530 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KW060_14290 hypothetical protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D KW060_10695 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D KW060_14730 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D KW060_14715 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D KW060_00245 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D KW060_02200 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D KW060_05060 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D KW060_06490 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D KW060_04000 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D KW060_13205 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:paqi03021]
D KW060_03225 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D KW060_03070 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D KW060_03075 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D KW060_04280 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D KW060_13605 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D KW060_04460 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KW060_09340 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KW060_11295 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KW060_12190 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KW060_13635 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D KW060_01525 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D KW060_10875 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D KW060_15735 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D KW060_04025 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D KW060_03045 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D KW060_05060 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D KW060_06490 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D KW060_13580 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D KW060_15495 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:paqi03019]
D KW060_05565 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D KW060_12115 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D KW060_04315 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D KW060_05395 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D KW060_03440 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D KW060_06745 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D KW060_08180 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D KW060_11200 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D KW060_08690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KW060_15765 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D KW060_15495 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D KW060_10725 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D KW060_09655 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KW060_05730 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D KW060_06550 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D KW060_06935 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D KW060_14555 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D KW060_10385 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D KW060_00110 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:paqi03011]
D KW060_02275 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D KW060_05450 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D KW060_03135 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D KW060_07235 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D KW060_03190 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D KW060_08855 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D KW060_03085 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D KW060_03175 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D KW060_06315 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D KW060_03100 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D KW060_03220 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D KW060_03080 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D KW060_03215 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D KW060_03170 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D KW060_15760 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D KW060_00325 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D KW060_03150 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D KW060_08860 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D KW060_03125 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D KW060_15830 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D KW060_13480 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D KW060_03055 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D KW060_03120 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D KW060_03105 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D KW060_03110 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D KW060_03165 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D KW060_03180 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D KW060_08865 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D KW060_03060 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D KW060_03050 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D KW060_03065 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D KW060_06310 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D KW060_03155 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D KW060_03200 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D KW060_03140 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D KW060_03230 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D KW060_03185 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D KW060_00340 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D KW060_13760 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D KW060_14495 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D KW060_03130 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D KW060_03115 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D KW060_03160 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D KW060_14500 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D KW060_02815 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D KW060_03145 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D KW060_03195 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D KW060_09200 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D KW060_13790 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D KW060_03435 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D KW060_13410 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D KW060_13755 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D KW060_09230 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D KW060_06065 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:paqi03009]
D KW060_04315 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D KW060_04320 era; GTPase Era K03595 era; GTPase
D KW060_14505 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D KW060_05060 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D KW060_06490 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D KW060_15735 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D KW060_04025 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D KW060_03045 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D KW060_08790 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D KW060_09020 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D KW060_15580 RsmD family RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D KW060_02010 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D KW060_02100 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D KW060_15520 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D KW060_13200 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D KW060_10675 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D KW060_04170 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D KW060_12895 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D KW060_03015 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D KW060_06255 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D KW060_14530 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D KW060_01755 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D KW060_12890 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D KW060_00635 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D KW060_02015 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D KW060_03260 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D KW060_01530 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D KW060_02895 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D KW060_06485 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D KW060_00330 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D KW060_12065 OsmC domain/YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D KW060_13095 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D KW060_10525 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D KW060_05565 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D KW060_12115 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D KW060_03470 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D KW060_08985 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D KW060_05735 hflX; GTPase HflX K03665 hflX; GTPase
D KW060_12930 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D KW060_04285 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D KW060_15750 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D KW060_15730 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D KW060_14525 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D KW060_02920 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D KW060_06055 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:paqi03016]
D KW060_05515 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KW060_07220 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KW060_05415 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KW060_01990 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D KW060_00425 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KW060_05980 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D KW060_03630 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KW060_06605 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KW060_05185 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KW060_13720 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KW060_03675 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D KW060_07225 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KW060_07940 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D KW060_15295 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D KW060_13765 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D KW060_13770 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D KW060_05630 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KW060_02860 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D KW060_00925 alanyl-tRNA editing protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D KW060_15725 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D KW060_13310 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D KW060_15755 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D KW060_05645 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KW060_05650 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KW060_12930 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D KW060_10295 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D KW060_15510 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D KW060_15515 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D KW060_01550 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D KW060_13405 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D KW060_10690 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D KW060_06600 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D KW060_10855 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D KW060_05810 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D KW060_01250 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D KW060_14855 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D KW060_02455 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D KW060_02460 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D KW060_00940 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D KW060_14750 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D KW060_02020 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D KW060_05695 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D KW060_02910 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D KW060_00305 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D KW060_07230 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D KW060_09585 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D KW060_00335 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D KW060_06815 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D KW060_00635 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D KW060_01660 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D KW060_01190 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D KW060_02695 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D KW060_09515 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D KW060_07660 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D KW060_14805 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D KW060_07655 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D KW060_03895 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D KW060_13700 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D KW060_09510 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D KW060_01470 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D KW060_02890 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D KW060_15695 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D KW060_10355 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D KW060_03440 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D KW060_15765 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:paqi03012]
D KW060_15745 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D KW060_13725 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D KW060_08755 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D KW060_05455 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D KW060_03030 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KW060_03095 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KW060_03090 fusA; elongation factor G K02355 fusA; elongation factor G
D KW060_15290 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D KW060_05465 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D KW060_15285 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D KW060_06060 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D KW060_12125 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D KW060_09160 efp; elongation factor P K02356 efp; elongation factor P
D KW060_05580 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D KW060_02475 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D KW060_04095 prfH; peptide chain release factor H K02839 prfH; peptide chain release factor
D KW060_14865 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:paqi03110]
D KW060_03375 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D KW060_15275 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D KW060_05290 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D KW060_01810 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D KW060_00210 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D KW060_10725 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D KW060_09655 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KW060_10730 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D KW060_13250 TerB family tellurite resistance protein K05801 djlA; DnaJ like chaperone protein
D KW060_10250 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D KW060_10700 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D KW060_09210 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D KW060_14315 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D KW060_09660 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D KW060_01340 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D KW060_01475 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D KW060_02410 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D KW060_15450 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D KW060_10720 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D KW060_14650 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D KW060_05875 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D KW060_06000 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D KW060_08710 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D KW060_02740 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D KW060_08780 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D KW060_10335 trxA; thioredoxin K03671 TXN; thioredoxin
D KW060_14755 trxA; thioredoxin K05838 ybbN; putative thioredoxin
D KW060_15355 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D KW060_07295 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D KW060_00275 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:paqi04131]
D KW060_08750 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D KW060_11860 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D KW060_01385 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KW060_09235 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D KW060_00210 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:paqi03051]
D KW060_00210 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:paqi03032]
D KW060_02175 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D KW060_05300 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KW060_05800 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KW060_04065 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D KW060_02270 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D KW060_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D KW060_08900 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D KW060_13600 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D KW060_09575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KW060_05440 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KW060_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KW060_08765 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D KW060_00435 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KW060_05975 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KW060_15455 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KW060_00815 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KW060_09080 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D KW060_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KW060_13105 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D KW060_09535 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D KW060_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D KW060_06130 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D KW060_08545 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D KW060_03445 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:paqi03036]
D KW060_04315 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D KW060_05300 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KW060_05800 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KW060_04065 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D KW060_02270 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D KW060_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D KW060_05730 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D KW060_00670 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KW060_11190 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KW060_12390 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KW060_02400 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D KW060_03650 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D KW060_03655 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D KW060_13140 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D KW060_14435 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D KW060_13190 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D KW060_14780 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D KW060_13195 hypothetical protein K03586 ftsL; cell division protein FtsL
D KW060_13145 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D KW060_13170 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D KW060_14430 hypothetical protein K09811 ftsX; cell division transport system permease protein
D KW060_13135 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KW060_01400 cell division protein ZapA K09888 zapA; cell division protein ZapA
D KW060_14690 AFG1 family ATPase K06916 zapE; cell division protein ZapE
D KW060_05570 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D KW060_12500 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D KW060_02665 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KW060_02670 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D KW060_02675 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D KW060_02685 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D KW060_03355 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein
D KW060_15525 ParA family protein K03496 parA; chromosome partitioning protein
D KW060_10900 ParA family protein K03496 parA; chromosome partitioning protein
D KW060_15530 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KW060_06130 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D KW060_08545 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D KW060_15515 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D KW060_15520 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D KW060_09585 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D KW060_14610 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D KW060_15395 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D KW060_01320 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D KW060_13390 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:paqi03400]
D KW060_15505 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D KW060_02385 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D KW060_01870 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D KW060_15370 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D KW060_15800 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D KW060_07075 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D KW060_06840 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D KW060_04265 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D KW060_07360 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D KW060_02690 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D KW060_15820 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D KW060_03615 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D KW060_14795 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D KW060_03740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KW060_13105 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D KW060_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KW060_09580 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D KW060_05530 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D KW060_07605 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D KW060_13075 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KW060_03070 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D KW060_03075 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D KW060_03225 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D KW060_04280 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D KW060_04155 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D KW060_02845 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D KW060_02005 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D KW060_02045 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D KW060_12910 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D KW060_05440 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KW060_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KW060_08765 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D KW060_00435 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KW060_05975 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KW060_15455 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KW060_00815 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KW060_09575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KW060_05180 recA; recombinase RecA K03553 recA; recombination protein RecA
D KW060_01425 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D KW060_01430 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D KW060_01420 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D KW060_14595 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D KW060_08920 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D KW060_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D KW060_04165 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D KW060_06140 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D KW060_00805 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D KW060_13110 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D KW060_10340 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D KW060_10345 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D KW060_04480 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD
D KW060_09535 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D KW060_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D KW060_03445 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D KW060_05300 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KW060_05800 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KW060_04065 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D KW060_02270 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D KW060_11200 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D KW060_03415 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D KW060_12815 hypothetical protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D KW060_04435 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D KW060_06150 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D KW060_04225 recombination regulator RecX K03565 recX; regulatory protein
D KW060_14850 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D KW060_00115 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D KW060_09480 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D KW060_00120 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:paqi03029]
D KW060_06015 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D KW060_15745 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D KW060_13725 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D KW060_05455 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D KW060_03030 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KW060_03095 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KW060_03090 fusA; elongation factor G K02355 fusA; elongation factor G
D KW060_04045 ubiquinol-cytochrome C chaperone family protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D KW060_14320 hypothetical protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D KW060_04320 era; GTPase Era K03595 era; GTPase
D KW060_05630 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KW060_00425 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KW060_06605 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KW060_03630 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KW060_04380 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D KW060_10260 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D KW060_04385 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D KW060_04375 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D KW060_09575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KW060_05490 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D KW060_10725 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D KW060_10700 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D KW060_09655 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KW060_09660 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D KW060_10730 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D KW060_05645 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KW060_05650 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KW060_07295 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D KW060_01320 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D KW060_02340 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D KW060_02345 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D KW060_06275 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D KW060_13395 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KW060_02360 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D KW060_00045 SCO family protein K07152 SCO1; protein SCO1
D KW060_14655 SCO family protein K07152 SCO1; protein SCO1
D KW060_00210 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:paqi02000]
D KW060_05215 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D KW060_09195 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D KW060_12600 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D KW060_12090 ATP-binding cassette domain-containing protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D KW060_00570 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D KW060_01175 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D KW060_01185 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D KW060_01180 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D KW060_12670 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D KW060_12690 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D KW060_06790 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D KW060_04790 ABC transporter permease K02069 STAR2; UDP-glucose/iron transport system permease protein
D KW060_09470 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D KW060_08910 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D KW060_08915 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D KW060_04950 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D KW060_00715 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D KW060_06760 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D KW060_00710 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D KW060_06765 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D KW060_00705 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D KW060_06770 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D KW060_10080 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D KW060_10085 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D KW060_10090 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D KW060_10095 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D KW060_04880 transporter substrate-binding domain-containing protein K23061 lhpP; hydroxyproline transporter system substrate-binding protein
D KW060_04865 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D KW060_15100 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D KW060_07520 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KW060_07525 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D KW060_07530 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D KW060_07535 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D KW060_13965 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D KW060_13970 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D KW060_13975 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D KW060_13120 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D KW060_03880 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D KW060_03875 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D KW060_07775 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D KW060_04190 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D KW060_04185 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D KW060_10870 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D KW060_02060 ABC transporter permease subunit K09696 natB; sodium transport system permease protein
D KW060_02065 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D KW060_05420 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D KW060_05425 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D KW060_00260 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D KW060_00255 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D KW060_00235 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D KW060_00230 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D KW060_14430 hypothetical protein K09811 ftsX; cell division transport system permease protein
D KW060_14435 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D KW060_01205 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D KW060_10040 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D KW060_10235 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D KW060_13360 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D KW060_13365 DUF3526 domain-containing protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D KW060_00190 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KW060_01215 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KW060_10045 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KW060_13355 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KW060_03985 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_05675 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_05835 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_06725 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_08415 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_08420 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_08515 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_08520 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_08590 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_09615 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_12715 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_12720 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_12725 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_12730 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_12735 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KW060_05670 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KW060_05830 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KW060_12710 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KW060_15545 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D KW060_00310 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D KW060_02035 Na/Pi symporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D KW060_00160 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D KW060_09405 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D KW060_09145 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D KW060_04230 3-phenylpropionate MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D KW060_07715 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D KW060_11175 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D KW060_02825 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D KW060_01790 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D KW060_15315 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D KW060_10375 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D KW060_10380 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D KW060_10885 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D KW060_05190 cyclic nucleotide-gated ion channel/potassium channel family protein K10716 kch; voltage-gated potassium channel
D KW060_14775 ammonium transporter K03320 amt; ammonium transporter, Amt family
D KW060_00855 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_02380 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_07065 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_07250 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_12265 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_13695 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D KW060_07900 VIT and VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D KW060_15035 formate/nitrite transporter family protein K02598 nirC; nitrite transporter
D KW060_10175 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D KW060_02705 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D KW060_03340 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D KW060_03940 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D KW060_03930 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D KW060_05115 OmpA family protein K02557 motB; chemotaxis protein MotB
D KW060_09185 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D KW060_01935 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D KW060_01940 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D KW060_13835 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D KW060_01945 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D KW060_01960 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D KW060_13840 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D KW060_01440 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D KW060_01445 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D KW060_03255 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D KW060_15420 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D KW060_00315 outer membrane beta-barrel protein K16079 omp31; outer membrane immunogenic protein
D KW060_06970 porin family protein K16079 omp31; outer membrane immunogenic protein
D KW060_09890 OprO/OprP family phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D KW060_10075 OprO/OprP family phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D KW060_13960 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D KW060_00690 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D KW060_03860 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D KW060_12055 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D KW060_12235 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D KW060_13990 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D KW060_14485 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D KW060_07950 TolC family outer membrane protein K12340 tolC; outer membrane protein
D KW060_12605 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D KW060_00650 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D KW060_07455 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D KW060_05490 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D KW060_13115 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D KW060_10865 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D KW060_00430 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D KW060_12845 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D KW060_09845 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D KW060_12495 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D KW060_05230 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump
D KW060_11255 EamA family transporter K15269 pecM; probable blue pigment (indigoidine) exporter
D KW060_07615 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D KW060_04925 sodium/proline symporter K11928 putP; sodium/proline symporter
D KW060_12325 sodium/proline symporter K11928 putP; sodium/proline symporter
D KW060_05770 cation acetate symporter K14393 actP; cation/acetate symporter
D KW060_05900 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D KW060_07645 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D KW060_15500 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D KW060_02635 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D KW060_05725 hypothetical protein K03498 trkH; trk/ktr system potassium uptake protein
D KW060_05720 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D KW060_12535 aromatic amino acid transporter K03835 mtr; tryptophan-specific transport protein
D KW060_13070 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D KW060_09115 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D KW060_11230 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D KW060_11940 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D KW060_02855 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D KW060_09060 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D KW060_10500 AEC family transporter K24180 mleP; malate permease and related proteins
D KW060_03585 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D KW060_13170 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D KW060_11860 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D KW060_01950 energy transducer TonB K03832 tonB; periplasmic protein TonB
D KW060_01965 energy transducer TonB K03832 tonB; periplasmic protein TonB
D KW060_01460 OmpA family protein K03640 pal; peptidoglycan-associated lipoprotein
D KW060_01455 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D KW060_02090 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D KW060_15670 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D KW060_15660 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D KW060_10655 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D KW060_12595 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D KW060_12500 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D KW060_05235 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D KW060_14340 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D KW060_14345 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D KW060_00270 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D KW060_04745 CopD family protein K07245 pcoD; copper resistance protein D
D KW060_04740 copper resistance protein CopC K07156 copC; copper resistance protein C
D KW060_06835 MipA/OmpV family protein K07274 mipA; MipA family protein
D KW060_11000 MipA/OmpV family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:paqi02044]
D KW060_07950 TolC family outer membrane protein K12340 tolC; outer membrane protein
D KW060_12090 ATP-binding cassette domain-containing protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D KW060_12600 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D KW060_10655 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D KW060_12595 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D KW060_12605 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D KW060_15170 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D KW060_15165 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D KW060_15160 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D KW060_15155 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D KW060_15150 type II secretion system protein K02458 gspI; general secretion pathway protein I
D KW060_15145 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D KW060_15140 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D KW060_15135 hypothetical protein K02461 gspL; general secretion pathway protein L
D KW060_15130 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D KW060_13555 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D KW060_13550 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D KW060_13545 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D KW060_13535 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D KW060_13265 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D KW060_13530 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D KW060_13525 type II secretion system F family protein K12510 tadB; tight adherence protein B
D KW060_13520 type II secretion system F family protein K12511 tadC; tight adherence protein C
D KW060_13560 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D KW060_13565 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D KW060_00170 YggT family protein K02221 yggT; YggT family protein
D KW060_05520 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D KW060_01625 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D KW060_05165 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D KW060_05135 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D KW060_01590 hypothetical protein K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D KW060_03300 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D KW060_05130 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D KW060_05125 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D KW060_05155 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D KW060_05160 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D KW060_07755 curli assembly protein CsgF K04338 csgF; curli production assembly/transport component CsgF
D KW060_07750 hypothetical protein K06214 csgG; curli production assembly/transport component CsgG
D KW060_15385 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KW060_15450 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D KW060_09635 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D KW060_03040 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KW060_09630 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D KW060_08700 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KW060_03205 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KW060_00320 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D KW060_00300 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D KW060_09640 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KW060_13395 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KW060_03660 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D KW060_03670 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:paqi02042]
D KW060_15420 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:paqi02022]
D KW060_07475 GHKL domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D KW060_07470 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D KW060_09720 response regulator transcription factor K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D KW060_10395 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D KW060_10400 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI
D KW060_01360 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D KW060_02720 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D KW060_07895 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D KW060_14075 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D KW060_06335 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D KW060_09740 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D KW060_10595 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D KW060_00525 LytTR family DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator
D KW060_05700 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D KW060_05705 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D KW060_05710 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D KW060_05715 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D KW060_01560 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KW060_12430 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KW060_01570 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_01980 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_12420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_12435 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_01575 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D KW060_03430 PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D KW060_03425 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D KW060_01585 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D KW060_09755 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
C 02035 Bacterial motility proteins [BR:paqi02035]
D KW060_01560 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KW060_12430 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D KW060_01565 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D KW060_12440 STAS domain-containing protein K03409 cheX; chemotaxis protein CheX
D KW060_01580 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D KW060_01575 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D KW060_01570 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_01980 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_12420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_12435 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D KW060_03780 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_07930 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_08005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_08365 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D KW060_01590 hypothetical protein K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D KW060_01600 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ
D KW060_05130 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D KW060_05125 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D KW060_05155 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D KW060_05160 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D KW060_01625 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D KW060_05165 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D KW060_05090 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D KW060_03300 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D KW060_05050 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D KW060_04035 hypothetical protein K02415 fliL; flagellar protein FliL
D KW060_05085 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D KW060_05150 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D KW060_05140 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D KW060_04150 hypothetical protein K02388 flgC; flagellar basal-body rod protein FlgC
D KW060_05145 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D KW060_01640 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D KW060_05080 flagellar hook basal-body protein K02391 flgF; flagellar basal-body rod protein FlgF
D KW060_05045 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D KW060_01630 hypothetical protein K02390 flgE; flagellar hook protein FlgE
D KW060_01650 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D KW060_01655 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D KW060_05025 flagellin K02406 fliC; flagellin
D KW060_05030 flagellin K02406 fliC; flagellin
D KW060_05035 flagellin K02406 fliC; flagellin
D KW060_06825 flagellin K02406 fliC; flagellin
D KW060_10920 flagellin K02406 fliC; flagellin
D KW060_03940 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D KW060_03930 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D KW060_05115 OmpA family protein K02557 motB; chemotaxis protein MotB
D KW060_09185 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D KW060_05005 flaF; flagellar biosynthesis regulator FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF
D KW060_05020 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D KW060_05000 flbT; flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT
D KW060_01620 ATP-binding protein K02404 flhF; flagellar biosynthesis protein FlhF
D KW060_01615 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D KW060_13560 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D KW060_13565 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D KW060_13555 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D KW060_13550 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D KW060_13545 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D KW060_13535 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D KW060_13265 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D KW060_13530 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:paqi04812]
D KW060_02665 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KW060_13135 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KW060_13140 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D KW060_03355 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein
D KW060_15525 ParA family protein K03496 parA; chromosome partitioning protein
D KW060_10900 ParA family protein K03496 parA; chromosome partitioning protein
D KW060_15530 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:paqi04147]
D KW060_00210 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D KW060_08690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KW060_01385 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KW060_01380 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D KW060_09235 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D KW060_05875 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D KW060_06000 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D KW060_08485 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D KW060_08490 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D KW060_09815 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D KW060_09655 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KW060_10725 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D KW060_13220 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D KW060_09025 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D KW060_03030 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KW060_03095 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KW060_12920 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D KW060_02035 Na/Pi symporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D KW060_02785 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KW060_10365 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D KW060_03210 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D KW060_06030 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D KW060_06775 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KW060_14465 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D KW060_03515 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D KW060_00645 hypothetical protein K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D KW060_15085 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D KW060_01040 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_05245 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KW060_03945 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D KW060_13130 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D KW060_07965 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D KW060_09495 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KW060_09500 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KW060_01510 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KW060_09155 glyoxylate/hydroxypyruvate reductase A K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D KW060_15595 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D KW060_04760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_06675 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14660 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D KW060_14365 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D KW060_10835 glucose-6-phosphate dehydrogenase (NADP(+)) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D KW060_08705 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:paqi02048]
D KW060_04700 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D KW060_11620 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D KW060_04705 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D KW060_11615 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D KW060_04710 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D KW060_04715 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D KW060_11610 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D KW060_09085 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72]
D KW060_14715 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D KW060_14720 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
D KW060_13135 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KW060_02665 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KW060_06130 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D KW060_08545 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D KW060_05515 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KW060_07220 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D KW060_04160 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D KW060_05645 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KW060_05650 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:paqi04090]
D KW060_13220 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:paqi01504]
D KW060_12500 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D KW060_12495 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D KW060_00650 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system
D KW060_07950 TolC family outer membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:paqi00537]
D KW060_09495 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KW060_09500 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D KW060_08485 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D KW060_08490 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:paqi03100]
D KW060_03745 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D KW060_05275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D KW060_12170 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D KW060_10790 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D KW060_10795 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D KW060_12005 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D KW060_10850 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D KW060_11180 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D KW060_10965 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D KW060_14140 indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D KW060_14135 indolepyruvate oxidoreductase subunit beta family protein K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D KW060_03560 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D KW060_12045 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D KW060_00445 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D KW060_00530 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D KW060_01110 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D KW060_03840 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D KW060_00440 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D KW060_00535 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D KW060_01105 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D KW060_03845 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D KW060_07440 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D KW060_12070 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D KW060_00135 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D KW060_00125 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D KW060_00575 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D KW060_05610 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D KW060_12075 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D KW060_08795 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D KW060_05860 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D KW060_01785 TauD/TfdA family dioxygenase K24291 tmpA; [2-(trimethylamino)ethyl]phosphonate dioxygenase [EC:1.14.11.72]
D KW060_02960 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D KW060_07140 hypothetical protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D KW060_03680 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D KW060_07955 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D KW060_03250 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D KW060_12215 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D KW060_02930 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D KW060_02905 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D KW060_11225 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D KW060_09460 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D KW060_03915 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D KW060_06085 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D KW060_10925 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D KW060_10630 hypothetical protein K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D KW060_15475 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D KW060_05615 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D KW060_15600 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D KW060_01435 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D KW060_08940 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D KW060_08305 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D KW060_05985 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D KW060_04695 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D KW060_11365 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D KW060_07385 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D KW060_13240 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D KW060_02970 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D KW060_15635 amidohydrolase family protein K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D KW060_13300 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D KW060_13625 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D KW060_13985 penicillin acylase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D KW060_14220 penicillin acylase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D KW060_07105 proline iminopeptidase-family hydrolase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101]
D KW060_15350 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D KW060_14145 cyclase family protein K01475 E3.5.2.20; isatin hydrolase [EC:3.5.2.20]
D KW060_05270 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D KW060_07170 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D KW060_01890 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D KW060_04115 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D KW060_05895 gluconate 2-dehydrogenase subunit 3 family protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
D KW060_10800 gluconate 2-dehydrogenase subunit 3 family protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
C 99982 Energy metabolism
D KW060_15335 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D KW060_14295 ferredoxin family protein K05524 fdxA; ferredoxin
D KW060_14360 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D KW060_01860 EI24 domain-containing protein K06203 cysZ; CysZ protein
D KW060_00405 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D KW060_06370 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D KW060_15675 tetratricopeptide repeat protein K02498 hemY; HemY protein
D KW060_15810 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D KW060_13475 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D KW060_06685 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D KW060_07990 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D KW060_00945 alpha/beta fold hydrolase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D KW060_07985 cold-shock protein K03704 cspA; cold shock protein
D KW060_08625 cold-shock protein K03704 cspA; cold shock protein
D KW060_10155 cold shock domain-containing protein K03704 cspA; cold shock protein
C 99974 Translation
D KW060_08720 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D KW060_03370 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D KW060_05280 tig; trigger factor K03545 tig; trigger factor
D KW060_00580 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D KW060_04245 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D KW060_10590 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D KW060_06730 hypothetical protein K07395 K07395; putative proteasome-type protease
D KW060_09560 DsbA family protein K07396 K07396; putative protein-disulfide isomerase
D KW060_03525 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D KW060_11345 DUF1156 domain-containing protein K07445 K07445; putative DNA methylase
D KW060_04105 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D KW060_13295 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D KW060_10670 YraN family protein K07460 yraN; putative endonuclease
D KW060_04250 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D KW060_06520 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D KW060_09065 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D KW060_10530 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D KW060_03450 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D KW060_03245 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D KW060_11340 IS30 family transposase K07482 K07482; transposase, IS30 family
C 99979 Viral proteins
C 99998 Others
D KW060_14725 pspA; phage shock protein PspA K03969 pspA; phage shock protein A
D KW060_00810 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D KW060_00640 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D KW060_03975 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D KW060_10620 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D KW060_10915 hypothetical protein K03301 TC.AAA; ATP:ADP antiporter, AAA family
D KW060_00550 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D KW060_10840 sodium/sugar symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D KW060_11165 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D KW060_12375 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D KW060_00450 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D KW060_02515 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D KW060_02555 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D KW060_03720 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D KW060_03790 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D KW060_12645 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D KW060_03715 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D KW060_10160 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D KW060_12240 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D KW060_00295 septation protein IspZ K06190 ispZ; intracellular septation protein
D KW060_14540 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D KW060_14205 universal stress protein K14055 uspE; universal stress protein E
D KW060_09780 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D KW060_12195 ChrR family anti-sigma-E factor K07167 chrR; putative transcriptional regulator
D KW060_02915 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D KW060_14055 PrkA family serine protein kinase K07180 prkA; serine protein kinase
C 99992 Structural proteins
D KW060_01270 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D KW060_11070 outer membrane beta-barrel protein K07275 ompW; outer membrane protein
D KW060_03330 YajG family lipoprotein K07286 yajG; uncharacterized lipoprotein
D KW060_02210 NfeD family protein K07340 ybbJ; inner membrane protein
D KW060_10050 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D KW060_05840 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D KW060_12705 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D KW060_10445 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
D KW060_00265 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D KW060_00280 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D KW060_00285 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D KW060_10100 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D KW060_02955 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D KW060_04890 hypothetical protein K06201 cutC; copper homeostasis protein
D KW060_02625 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D KW060_08165 copper resistance protein B K07233 pcoB; copper resistance protein B
D KW060_11925 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D KW060_08925 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D KW060_13745 tRNA-binding protein K06878 K06878; tRNA-binding protein
D KW060_06375 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D KW060_10845 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D KW060_00970 rssA; patatin-like phospholipase RssA K07001 K07001; NTE family protein
D KW060_13320 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D KW060_03620 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D KW060_15540 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D KW060_15550 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D KW060_03520 metal-dependent hydrolase K07038 K07038; inner membrane protein
D KW060_12865 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D KW060_15445 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D KW060_01195 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D KW060_10435 LemA family protein K03744 lemA; LemA protein
D KW060_00095 SlyX family protein K03745 slyX; SlyX protein
D KW060_07245 DUF350 domain-containing protein K08989 K08989; putative membrane protein
C 99997 Function unknown
D KW060_09960 hypothetical protein K06889 K06889; uncharacterized protein
D KW060_12385 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D KW060_01720 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D KW060_04595 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D KW060_04675 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein
D KW060_04665 phage tail protein K06906 gpU; phage tail protein
D KW060_04640 phage tail sheath subtilisin-like domain-containing protein K06907 FI; Bacteriophage tail sheath protein
D KW060_04645 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D KW060_09645 ATP-binding protein K06923 K06923; uncharacterized protein
D KW060_14905 L-cystine transporter K06956 K06956; uncharacterized protein
D KW060_10625 BtpA/SgcQ family protein K06971 K06971; uncharacterized protein
D KW060_06180 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D KW060_06195 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D KW060_15030 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D KW060_11135 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D KW060_12150 VOC family protein K06991 K06991; uncharacterized protein
D KW060_08875 hypothetical protein K06992 K06992; uncharacterized protein
D KW060_01085 DUF861 domain-containing protein K06995 K06995; uncharacterized protein
D KW060_01350 DUF861 domain-containing protein K06995 K06995; uncharacterized protein
D KW060_07585 VOC family protein K06996 K06996; uncharacterized protein
D KW060_05640 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D KW060_15715 alpha/beta fold hydrolase K07020 K07020; uncharacterized protein
D KW060_01145 amidohydrolase family protein K07045 K07045; uncharacterized protein
D KW060_03830 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D KW060_09540 permease K07089 K07089; uncharacterized protein
D KW060_00610 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D KW060_08675 TSUP family transporter K07090 K07090; uncharacterized protein
D KW060_13620 DUF839 domain-containing protein K07093 K07093; uncharacterized protein
D KW060_00720 hypothetical protein K07101 K07101; uncharacterized protein
D KW060_08965 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D KW060_13885 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D KW060_13890 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D KW060_04390 SEL1-like repeat protein K07126 K07126; uncharacterized protein
D KW060_08225 sel1 repeat family protein K07126 K07126; uncharacterized protein
D KW060_08410 sel1 repeat family protein K07126 K07126; uncharacterized protein
D KW060_08395 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D KW060_12230 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D KW060_13350 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D KW060_14760 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D KW060_13400 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D KW060_10150 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D KW060_13595 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D KW060_00040 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D KW060_12220 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D KW060_08730 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D KW060_15705 YciI family protein K09780 K09780; uncharacterized protein
D KW060_14050 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D KW060_07625 YbaN family protein K09790 K09790; uncharacterized protein
D KW060_14765 Trm112 family protein K09791 K09791; uncharacterized protein
D KW060_08540 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D KW060_14550 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D KW060_11370 hypothetical protein K09805 K09805; uncharacterized protein
D KW060_13025 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D KW060_13030 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D KW060_12665 hypothetical protein K00243 K00243; uncharacterized protein
D KW060_12980 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D KW060_12110 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D KW060_03395 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D KW060_14605 DUF484 family protein K09921 K09921; uncharacterized protein
D KW060_11195 winged helix DNA-binding domain-containing protein K09927 K09927; uncharacterized protein
D KW060_04295 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D KW060_09070 TIGR04282 family arsenosugar biosynthesis glycosyltransferase K09931 K09931; uncharacterized protein
D KW060_01335 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D KW060_09250 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein
D KW060_12175 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein
D KW060_11105 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein
D KW060_13750 TraB/GumN family protein K09973 K09973; uncharacterized protein
D KW060_12255 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein
D KW060_13050 hypothetical protein K09985 K09985; uncharacterized protein
D KW060_06925 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D KW060_13440 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein
D KW060_06845 2OG-Fe(II) oxygenase K09990 K09990; uncharacterized protein
D KW060_07945 DUF2497 domain-containing protein K09991 K09991; uncharacterized protein
D KW060_11985 ThuA domain-containing protein K09992 K09992; uncharacterized protein
D KW060_15740 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024