+E Transcription factors KO
#
Transcription Factors - Paraburkholderia aromaticivorans
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D CJU94_19730 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CJU94_40450 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CJU94_39600 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D CJU94_05175 AraC family transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D CJU94_02215 AraC family transcriptional regulator K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D CJU94_35030 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CJU94_23400 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D CJU94_34980 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D CJU94_05220 GyrI-like domain-containing protein K13652 K13652; AraC family transcriptional regulator
D CJU94_35145 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D CJU94_27945 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D CJU94_32220 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D CJU94_28780 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D CJU94_31450 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D CJU94_31560 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D CJU94_32920 transcriptional regulator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D CJU94_25125 AraC family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D CJU94_17265 AraC family transcriptional regulator K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D CJU94_21495 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D CJU94_21590 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D CJU94_17760 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
C LysR family
D CJU94_31855 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJU94_04055 XRE family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJU94_02915 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJU94_29490 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJU94_21140 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJU94_01160 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJU94_24150 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJU94_28930 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJU94_33840 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJU94_29655 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJU94_29645 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D CJU94_22935 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D CJU94_25230 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D CJU94_02680 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CJU94_17535 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D CJU94_01420 CysB family HTH-type transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D CJU94_16290 CysB family HTH-type transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D CJU94_21980 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D CJU94_32710 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D CJU94_25285 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D CJU94_17485 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D CJU94_31995 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D CJU94_20095 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D CJU94_11970 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D CJU94_17715 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D CJU94_27140 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D CJU94_24855 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CJU94_01020 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CJU94_01075 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CJU94_22835 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CJU94_11980 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CJU94_20945 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CJU94_33575 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D CJU94_33625 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D CJU94_08135 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D CJU94_08465 hypothetical protein K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D CJU94_31240 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CJU94_32285 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CJU94_37775 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CJU94_17510 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CJU94_14610 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CJU94_37310 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CJU94_14565 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D CJU94_35220 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D CJU94_31890 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
C DeoR family
D CJU94_22170 DeoR family transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D CJU94_08380 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D CJU94_21225 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D CJU94_20320 AraC family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D CJU94_04005 alkaline phosphatase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CJU94_34525 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D CJU94_17630 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CJU94_14040 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CJU94_27305 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CJU94_32960 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CJU94_34345 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CJU94_30075 XylR family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CJU94_13955 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D CJU94_01460 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D CJU94_24055 LacI family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
C GntR family
D CJU94_32695 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D CJU94_20610 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D CJU94_20615 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D CJU94_17405 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D CJU94_09060 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CJU94_03760 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CJU94_27840 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CJU94_29175 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CJU94_33490 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CJU94_03180 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CJU94_34495 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CJU94_08010 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CJU94_23320 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CJU94_20720 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CJU94_30385 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CJU94_26415 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CJU94_26825 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CJU94_15100 transcriptional regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D CJU94_26035 hypothetical protein K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D CJU94_25825 2-aminoadipate aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CJU94_24925 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CJU94_25470 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CJU94_14890 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CJU94_28055 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CJU94_21905 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CJU94_29100 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CJU94_37810 transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
C TetR/AcrR family
D CJU94_21575 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D CJU94_08670 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D CJU94_04835 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D CJU94_11410 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D CJU94_30005 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D CJU94_31810 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CJU94_23450 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CJU94_27260 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CJU94_32620 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CJU94_34090 TetR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D CJU94_13830 TetR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D CJU94_39215 hypothetical protein K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D CJU94_26165 TetR family transcriptional regulator K22294 nicS; TetR/AcrR family transcriptional regulator, upper aerobic nicotinate degradation pathway regulator
C Lrp/AsnC family
D CJU94_27315 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CJU94_35760 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CJU94_06545 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CJU94_10030 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CJU94_04350 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CJU94_20245 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CJU94_34625 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CJU94_04535 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CJU94_08815 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CJU94_05335 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CJU94_05590 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CJU94_17085 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D CJU94_26400 LuxR family transcriptional regulator K18304 lasR; LuxR family transcriptional regulator, quorum-sensing system regulator LasR
D CJU94_27645 LuxR family transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D CJU94_30130 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D CJU94_23695 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D CJU94_29455 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CJU94_33815 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CJU94_26620 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D CJU94_36505 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CJU94_18280 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CJU94_25695 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D CJU94_16050 MerR family transcriptional regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
C Fur family
D CJU94_08030 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CJU94_20875 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D CJU94_08730 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D CJU94_11915 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D CJU94_25800 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D CJU94_25820 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D CJU94_06450 4-hydroxyphenylpyruvate dioxygenase K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D CJU94_32720 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D CJU94_31705 transcriptional regulator K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D CJU94_14295 DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D CJU94_17145 IclR family transcriptional regulator K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
C CRP/FNR family
D CJU94_28460 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CJU94_14285 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CJU94_33650 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CJU94_13615 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CJU94_30045 hypothetical protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CJU94_13210 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CJU94_26425 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D CJU94_12215 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D CJU94_16105 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D CJU94_01950 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CJU94_00280 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CJU94_00295 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CJU94_09820 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
C XRE family
D CJU94_11390 shikimate kinase K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D CJU94_21835 transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D CJU94_08100 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D CJU94_03065 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D CJU94_04110 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CJU94_08255 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CJU94_23160 prpR; propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D CJU94_32075 prpR; propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D CJU94_20915 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D CJU94_11235 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D CJU94_16665 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D CJU94_39550 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D CJU94_27760 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CJU94_31165 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CJU94_14925 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CJU94_23640 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CJU94_31695 nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D CJU94_33100 nifA; nif-specific transcriptional activator NifA K02584 nifA; Nif-specific regulatory protein
D CJU94_29410 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D CJU94_23210 ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D CJU94_36645 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D CJU94_36000 molybdenum transport protein ModE K02019 modE; molybdate transport system regulatory protein
D CJU94_18980 transporter K02019 modE; molybdate transport system regulatory protein
D CJU94_23665 hypothetical protein K21829 dauR; D-arginine utilization repressor
B Ribbon-helix-helix
C CopG family
C Other families
D CJU94_05765 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D CJU94_37715 LytTR family transcriptional regulator K21696 rcoM; LytTR family transcriptional regulator, CO-responsive transcriptional regulator RcoM
D CJU94_15385 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D CJU94_03465 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJU94_34365 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJU94_36910 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJU94_28620 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJU94_00185 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJU94_05680 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJU94_39370 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJU94_02580 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CJU94_11525 transcription elongation factor GreAB K06140 rnk; regulator of nucleoside diphosphate kinase
D CJU94_01890 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CJU94_14895 transcriptional regulator K07734 paiB; transcriptional regulator
D CJU94_29085 transcriptional regulator K07734 paiB; transcriptional regulator
D CJU94_01900 DUF179 domain-containing protein K07735 algH; putative transcriptional regulator
D CJU94_04790 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D CJU94_02070 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D CJU94_02410 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D CJU94_07570 transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0