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  Transcription Machinery - Pseudomonas atacamensis

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AEukaryotic type B RNA polymerase II system C RNA polymerase II D Core subunits D Pol II specific subunits D Pol I, II, III common subunits D Pol IV and V specific subunits C Basal transcription factors D TFIIA D TFIIB D TFIID D TFIIE D TFIIF D TFIIH E JWU58_13045 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C Mediator complex D Head D Middle D Tail D CDK-module D Other mediators C Coactivators D SAGA/TFTC/STAGA complex D BAF/PBAF complex D SWI/SNF complex D RSC complex D Others C Other transcription-related factors D Transcription elongation factors D Transcription termination factor D PAF1 complex D NELF complex D Super elongation complex (SEC) D Little elongation complex (LEC) D Brd4/P-TEFb complex D BUR kinase complex D CTDK-I complex D 7SK RNP complex D DBIRD complex D Others B RNA polymerase III system C RNA polymerase III D Core subunits D Pol III specific subunits D Pol I, II, III common subunits C Basal transcription factors D TFIIIA D TFIIIB D TFIIIC D TFIIIC, fungi type C Other transcription-related factors D snRNA-activating protein complex (SNAPc) D Octamer transcription factors D Others B RNA polymerase I system C RNA polymerase I D Core subunits D Pol I specific subunits D Pol I, II, III common subunits C Basal transcription factors D SL1/TIF-1B C Other transcription-related factors D UBF D Transcription initiation factors D Transcription elongation factors D NoRC (nucleolar remodeling complex) D CTDK-I complex D Transcription termination factors D Others # AProkaryotic type B Bacterial type C RNA polymerase D Core subunits E JWU58_03775 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] E JWU58_03615 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] E JWU58_03620 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] E JWU58_01400 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Sigma factors E JWU58_03265 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor E JWU58_21910 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor E JWU58_18460 sigX; RNA polymerase sigma factor SigX K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E JWU58_20495 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E JWU58_20820 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E JWU58_07315 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E JWU58_10005 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily E JWU58_22905 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E JWU58_03075 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E JWU58_13590 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E JWU58_26625 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E JWU58_13410 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E JWU58_00610 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily E JWU58_02405 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor E JWU58_23225 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor E JWU58_19840 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C Other transcription-related factors D RNA polymerase-associated proteins E JWU58_21250 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] E JWU58_23620 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA E JWU58_03990 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB E JWU58_03590 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG E JWU58_05590 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A E JWU58_05595 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B E JWU58_15260 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] E JWU58_15255 STAS domain-containing protein K17762 rsbS; rsbT antagonist protein RsbS E JWU58_15250 STAS domain-containing protein K17763 rsbR; rsbT co-antagonist protein RsbR E JWU58_09570 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] E JWU58_20815 anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA E JWU58_20810 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB D Transcription elongation factors E JWU58_05010 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor E JWU58_11680 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor E JWU58_23680 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA E JWU58_08770 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D Transcription termination factor E JWU58_01860 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho B Archaeal type C RNA polymerase D Core subunits C Basal transcription factors D TFB D TFE D TFS ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024