+E Ribosome biogenesis KO
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Ribosome Biogenesis - Cutibacterium acnes TypeIA2 P.acn17
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D TIA2EST22_07245 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D TIA2EST22_08065 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C TIA2EST22_04660 GTP-binding protein Era K03595 era; GTPase
C TIA2EST22_04185 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C TIA2EST22_03875 DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
C TIA2EST22_07495 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C TIA2EST22_05910 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
C TIA2EST22_09245 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D TIA2EST22_02630 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D TIA2EST22_05950 tRNA/rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D TIA2EST22_08880 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D TIA2EST22_10025 methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D TIA2EST22_07345 RNA methyltransferase, RsmD family protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D TIA2EST22_04565 RNA methyltransferase, RsmE family protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D TIA2EST22_11605 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TIA2EST22_03795 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D TIA2EST22_02620 S-adenosylmethionine-dependent methyltransferase, YraL family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D TIA2EST22_06960 cytotoxin/hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D TIA2EST22_07705 methyltransferase domain protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D TIA2EST22_01890 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D TIA2EST22_07595 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D TIA2EST22_06960 cytotoxin/hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D TIA2EST22_11440 RNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D TIA2EST22_06915 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D TIA2EST22_03885 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C TIA2EST22_08755 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C TIA2EST22_02470 acetyltransferase, GNAT family protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C TIA2EST22_07180 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
C TIA2EST22_05000 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
B rRNA processing factors
C TIA2EST22_07245 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C TIA2EST22_04155 ribonuclease, Rne/Rng family protein K08300 rne; ribonuclease E [EC:3.1.26.12]
C TIA2EST22_05860 RNAse YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
B GTPases
C TIA2EST22_04660 GTP-binding protein Era K03595 era; GTPase
C TIA2EST22_06315 GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C TIA2EST22_06020 ribosome-associated GTPase EngA K03977 engA; GTPase
C TIA2EST22_04185 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
C TIA2EST22_05075 GTP-binding protein K03665 hflX; GTPase
B Other maturation factors
C TIA2EST22_06220 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C TIA2EST22_05795 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C TIA2EST22_07465 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C TIA2EST22_07500 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
C TIA2EST22_03020 hypothetical protein K14761 rlbA; ribosome-associated protein
C TIA2EST22_04210 iojap-like protein K09710 ybeB; ribosome-associated protein
C TIA2EST22_04650 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor
C TIA2EST22_02885 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C TIA2EST22_07255 hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024