+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Prunus avium (sweet cherry)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        110761372 DNA-directed RNA polymerase II subunit 1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        110766738 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        110749525 DNA-directed RNA polymerases II, IV and V subunit 3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        110756314 DNA-directed RNA polymerases II, IV and V subunit 11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        110747416 DNA-directed RNA polymerase II subunit 4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        110773624 DNA-directed RNA polymerase II subunit 4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        110768612 DNA-directed RNA polymerases IV and V subunit 4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        110760526 uncharacterized protein LOC110760526	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        110760358 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        110763912 DNA-directed RNA polymerases II, IV and V subunit 9A	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        110768471 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110774334 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110745705 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110745706 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110759384 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        110761619 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        110744659 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        110755249 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        110748285 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        110760147 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        110746323 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        110753209 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
E        110747945 DNA-directed RNA polymerase IV subunit 1 isoform X1	K16250 NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] 
E        110765217 DNA-directed RNA polymerase V subunit 1 isoform X1	K16251 NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] 
E        110762657 DNA-directed RNA polymerases IV and V subunit 2-like	K16252 NRPD2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] 
E        110763549 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        110763551 DNA-directed RNA polymerase V subunit 7-like	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
E        110763595 DNA-directed RNA polymerase V subunit 7-like isoform X1	K16253 NRPD7; DNA-directed RNA polymerase IV and V subunit 7 
C    Basal transcription factors
D      TFIIA
E        110757073 transcription initiation factor IIA large subunit-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        110772114 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        110750262 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        110767218 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        110750273 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        110765338 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        110752055 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        110745330 TATA-box-binding protein 1-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        110759006 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        110767034 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        110767045 transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        110754021 transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        110754081 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        110766333 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        110752233 transcription initiation factor TFIID subunit 4b-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        110762668 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        110766651 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        110772443 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        110763025 transcription initiation factor TFIID subunit 7 isoform X1	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        110761479 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        110745220 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        110772174 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        110768893 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        110768902 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        110749427 transcription initiation factor TFIID subunit 10 isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        110763648 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        110753557 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        110744865 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        110765215 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        110750119 LOW QUALITY PROTEIN: transcription initiation factor IIE subunit alpha-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        110754121 general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        110759185 transcription initiation factor IIE subunit beta-like isoform X1	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
E        110745640 transcription initiation factor IIE subunit beta-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        110764535 transcription initiation factor IIF subunit alpha isoform X1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        110767951 general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        110771582 transcription initiation factor IIF subunit beta	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        110765766 probable RNA polymerase II transcription factor B subunit 1-3 isoform X1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        110766149 probable RNA polymerase II transcription factor B subunit 1-3	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        110771269 general transcription factor IIH subunit 2-like	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        110750614 RNA polymerase II transcription factor B subunit 4	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        110766805 RNA polymerase II transcription factor B subunit 2 isoform X1	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        110762496 DNA repair helicase XPB1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        110749841 DNA repair helicase XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        110753654 RNA polymerase II transcription factor B subunit 5-like	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        110747017 cyclin-dependent kinase D-3	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        110756952 uncharacterized protein LOC110756952 isoform X1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        110745961 cyclin-H1-1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        110769919 mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        110762937 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        110759970 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        110759572 mediator of RNA polymerase II transcription subunit 18 isoform X1	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        110749146 mediator of RNA polymerase II transcription subunit 20a isoform X1	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        110756951 mediator of RNA polymerase II transcription subunit 22a-like	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        110767947 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
D      Middle
E        110749096 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 7a-like	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        110767142 mediator of RNA polymerase II transcription subunit 10b-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        110758883 mediator of RNA polymerase II transcription subunit 10b-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        110751622 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        110763125 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        110768829 mediator of RNA polymerase II transcription subunit 31 isoform X1	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        110754282 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
D      CDK-module
E        110770063 cyclin-dependent kinase E-1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        110757029 cyclin-C1-2-like	K15161 CCNC; cyclin-C 
E        110758990 mediator of RNA polymerase II transcription subunit 13 isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        110762709 mediator of RNA polymerase II transcription subunit 23 isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        110757099 mediator of RNA polymerase II transcription subunit 25	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        110763830 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        110769934 mediator of RNA polymerase II transcription subunit 32	K27471 MED32; mediator of RNA polymerase II transcription subunit 32 
E        110749869 mediator of RNA polymerase II transcription subunit 33B-like	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        110750461 mediator of RNA polymerase II transcription subunit 33A isoform X1	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
E        110769372 mediator of RNA polymerase II transcription subunit 33A-like	K27472 MED33; mediator of RNA polymerase II transcription subunit 33 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        110763443 histone acetyltransferase GCN5	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        110757862 transformation/transcription domain-associated protein isoform X1	K08874 TRRAP; transformation/transcription domain-associated protein 
E        110749948 transcriptional adapter ADA2a-like isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        110771671 transcriptional adapter ADA2	K11314 TADA2A; transcriptional adapter 2-alpha 
E        110754081 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        110766333 transcription initiation factor TFIID subunit 4b isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        110752233 transcription initiation factor TFIID subunit 4b-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        110762668 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        110766651 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        110772443 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        110763025 transcription initiation factor TFIID subunit 7 isoform X1	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        110768893 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        110768902 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        110749427 transcription initiation factor TFIID subunit 10 isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        110753557 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        110744865 transcription initiation factor TFIID subunit 12b	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        110758647 SAGA-associated factor 11 homolog	K11363 SGF11; SAGA-associated factor 11 
E        110756797 uncharacterized protein LOC110756797 isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        110761585 protein CHROMATIN REMODELING 5	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        110764462 uncharacterized protein LOC110764462 isoform X1	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        110762639 ubiquitin carboxyl-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        110756536 spliceosome-associated protein 130 A	K12830 SF3B3; splicing factor 3B subunit 3 
E        110749075 splicing factor 3B subunit 3	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        110751779 ATP-dependent helicase BRM	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        110755385 chromatin structure-remodeling complex protein BSH isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        110755093 SWI/SNF complex subunit SWI3B	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        110750579 SWI/SNF complex subunit SWI3C isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        110763134 SWI/SNF complex subunit SWI3B-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        110770176 SWI/SNF complex subunit SWI3D isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        110760349 SWI/SNF complex subunit SWI3A	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        110764400 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        110763036 SWI/SNF complex component SNF12 homolog	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        110772615 actin-related protein 4	K11340 ACTL6A; actin-like protein 6A 
D      SWI/SNF complex
E        110755385 chromatin structure-remodeling complex protein BSH isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        110771739 RNA polymerase II transcriptional coactivator KELP-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        110754303 RNA polymerase II transcriptional coactivator KIWI-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        110751279 cell division cycle and apoptosis regulator protein 1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        110768937 transcription elongation factor TFIIS	K03145 TFIIS; transcription elongation factor S-II 
E        110765076 transcription elongation factor SPT4 homolog 1-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        110749785 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        110748314 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        110759122 transcription elongation factor SPT6 homolog	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        110753514 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        110763061 polyadenylation and cleavage factor homolog 4 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        110764714 cleavage and polyadenylation specificity factor subunit 1 isoform X1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        110765663 cleavage and polyadenylation specificity factor subunit 3-I-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        110765664 cleavage and polyadenylation specificity factor subunit 3-I-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        110755501 30-kDa cleavage and polyadenylation specificity factor 30	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        110749902 uncharacterized protein LOC110749902 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        110748973 serine/threonine-protein phosphatase PP1-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110754323 serine/threonine-protein phosphatase PP1 isozyme 3-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110756651 serine/threonine-protein phosphatase PP1 isozyme 4	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110769380 serine/threonine-protein phosphatase PP1 isozyme 2-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110745078 serine/threonine-protein phosphatase PP1 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110762493 serine/threonine-protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        110770483 uncharacterized protein LOC110770483	K06100 SYMPK; symplekin 
E        110772068 uncharacterized protein LOC110772068	K06100 SYMPK; symplekin 
E        110745364 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        110771075 5'-3' exoribonuclease 3 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        110754545 decapping nuclease DXO homolog, chloroplastic	K14845 RAI1; RAT1-interacting protein 
E        110751546 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        110773616 regulation of nuclear pre-mRNA domain-containing protein 1B	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        110764439 UPF0400 protein C337.03 isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        110773560 peptidyl-prolyl cis-trans isomerase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        110760755 protein PAF1 homolog isoform X1	K15174 PAF1; RNA polymerase II-associated factor 1 
E        110774478 protein PAF1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        110755022 protein CDC73 homolog	K15175 CDC73; parafibromin 
E        110749143 protein CTR9 homolog isoform X1	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        110753359 protein LEO1 homolog	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        110766057 protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        110767809 LOW QUALITY PROTEIN: protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        110772026 ELL-associated factor 2	K15186 EAF; ELL-associated factor 
E        110765383 ELL-associated factor 2	K15186 EAF; ELL-associated factor 
E        110768985 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
E        110768986 cyclin-T1-5-like	K15188 CCNT; cyclin T 
E        110771592 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        110774144 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        110768985 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
E        110768986 cyclin-T1-5-like	K15188 CCNT; cyclin T 
E        110771592 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        110774144 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        110751046 probable RNA methyltransferase At5g51130	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        110756933 la-related protein 6B isoform X1	K15191 LARP7; La-related protein 7 
E        110774023 la-related protein 6A	K15191 LARP7; La-related protein 7 
E        110762943 la-related protein 6C isoform X1	K15191 LARP7; La-related protein 7 
E        110768985 cyclin-T1-3-like isoform X1	K15188 CCNT; cyclin T 
E        110768986 cyclin-T1-5-like	K15188 CCNT; cyclin T 
E        110771592 cyclin-T1-3-like	K15188 CCNT; cyclin T 
E        110774144 cyclin-T1-4-like isoform X1	K15188 CCNT; cyclin T 
D      DBIRD complex
D      Others
E        110759039 TATA-binding protein-associated factor BTAF1 isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        110754150 protein Dr1 homolog	K21751 DR1; down-regulator of transcription 1 
E        110746774 dr1-associated corepressor homolog isoform X1	K21752 DRAP1; Dr1-associated corepressor 
E        110763880 uncharacterized protein LOC110763880	K15193 SPTY2D1; protein SPT2 
E        110767175 protein spt2-like	K15193 SPTY2D1; protein SPT2 
E        110770461 LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain phosphatase-like 2	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        110766771 RNA polymerase II C-terminal domain phosphatase-like 1	K18998 CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] 
E        110756904 RNA polymerase II C-terminal domain phosphatase-like 4	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        110764896 RNA polymerase II C-terminal domain phosphatase-like 3	K18999 CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16] 
E        110749733 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        110756112 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        110756123 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        110770507 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        110752285 protein IWS1 homolog 1	K17498 SPN1; transcription factor SPN1 
E        110744385 transcriptional elongation regulator MINIYO	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        110753824 transcriptional elongation regulator MINIYO-like	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        110770592 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        110762918 RNA polymerase II-associated protein 3 isoform X1	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        110748475 MADS-box protein FLOWERING LOCUS C-like	K12412 MCM1; pheromone receptor transcription factor 
E        110756365 MADS-box protein FLOWERING LOCUS C-like	K12412 MCM1; pheromone receptor transcription factor 
E        110753445 agamous-like MADS-box protein AGL29	K12412 MCM1; pheromone receptor transcription factor 
E        110768235 GPN-loop GTPase 2-like	K24104 GPN; GPN-loop GTPase 
E        110752293 GPN-loop GTPase 1	K24104 GPN; GPN-loop GTPase 
E        110772818 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        110772455 GPN-loop GTPase 2-like	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        110752801 DNA-directed RNA polymerase III subunit 1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        110760162 DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        110767248 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        110767786 DNA-directed RNA polymerase III subunit RPC3 isoform X1	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        110764733 DNA-directed RNA polymerase III subunit rpc4-like isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        110749144 uncharacterized protein LOC110749144	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        110765353 DNA-directed RNA polymerase III subunit RPC5 isoform X1	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        110765596 DNA-directed RNA polymerase III subunit rpc6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        110757122 DNA-directed RNA polymerase III subunit RPC6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        110768526 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        110754813 DNA-directed RNA polymerase III subunit RPC8-like	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        110771044 LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC8-like	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        110757888 DNA-directed RNA polymerase III subunit RPC8-like	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        110750945 DNA-directed RNA polymerase III subunit rpc8-like	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        110768067 DNA-directed RNA polymerase III subunit RPC8-like isoform X1	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        110771055 uncharacterized protein LOC110771055	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        110768670 uncharacterized protein LOC110768670	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        110757617 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        110768471 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110774334 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110745705 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110745706 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110759384 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        110761619 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        110744659 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        110755249 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        110748285 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        110760147 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        110746323 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        110753209 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        110745398 transcription factor IIIA	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        110745330 TATA-box-binding protein 1-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        110759006 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        110760485 transcription factor IIIB 60 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        110754704 plant-specific TFIIB-related protein PTF2	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        110768541 uncharacterized protein LOC110768541 isoform X1	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        110749324 uncharacterized protein LOC110749324	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        110744864 uncharacterized protein LOC110744864	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        110753518 uncharacterized protein LOC110753518	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        110774615 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        110744484 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        110744288 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
D      TFIIIC, fungi type
E        110744288 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        110774615 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        110744484 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        110750618 uncharacterized protein LOC110750618 isoform X1	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        110767378 snRNA-activating protein complex subunit-like	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        110767360 snRNA-activating protein complex subunit-like isoform X1	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        110765375 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        110771480 DNA-directed RNA polymerase I subunit 1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        110765756 DNA-directed RNA polymerase I subunit 2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        110760162 DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        110767248 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        110759494 DNA-directed RNA polymerase I subunit rpa49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        110769153 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        110768471 DNA-directed RNA polymerase V subunit 5A	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110774334 DNA-directed RNA polymerase V subunit 5C	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110745705 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110745706 DNA-directed RNA polymerases II and IV subunit 5A-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        110759384 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        110761619 DNA-directed RNA polymerases II, IV and V subunit 6A-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        110744659 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        110755249 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        110748285 DNA-directed RNA polymerases II and V subunit 8A-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        110760147 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        110746323 DNA-directed RNA polymerases II, IV and V subunit 12-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        110753209 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        110745330 TATA-box-binding protein 1-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        110759006 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
E        110760619 LOW QUALITY PROTEIN: high mobility group B protein 6-like	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        110752495 RNA polymerase I-specific transcription initiation factor RRN3-like	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        110748861 RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        110748863 RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        110748885 RNA polymerase I-specific transcription initiation factor rrn3-like	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        110762947 upstream activation factor subunit UAF30 isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        110765076 transcription elongation factor SPT4 homolog 1-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        110749785 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        110748314 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        110751581 ISWI chromatin-remodeling complex ATPase CHR11	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
E        110758575 RNA polymerase sigma factor sigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        110761144 RNA polymerase sigma factor sigC isoform X1	K03093 sigI; RNA polymerase sigma-I factor 
E        110767178 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial	K03093 sigI; RNA polymerase sigma-I factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        110750262 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        110767218 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
E        110750273 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        110765338 plant-specific TFIIB-related protein 1	K03124 TFIIB; transcription initiation factor TFIIB 
E        110752055 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        110750119 LOW QUALITY PROTEIN: transcription initiation factor IIE subunit alpha-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        110754121 general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#<hr>
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#Last updated: April 9, 2024