+F Repair protein KO
#
DNA Repair and Recombination Proteins - Prunus avium (sweet cherry)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 110768589 DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 110757959 DExH-box ATP-dependent RNA helicase DExH14 isoform X1 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 110753712 deoxyribodipyrimidine photo-lyase isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 110754573 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 110755847 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 110745919 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 110748333 adenine DNA glycosylase-like K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 110756371 uncharacterized protein LOC110756371 isoform X1 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 110750583 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 110766849 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 110760049 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 110758015 DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
E 110748273 DNA-(apurinic or apyrimidinic site) lyase 2-like isoform X1 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 110751190 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 110770759 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
F 110757547 DNA polymerase delta subunit 3 K03504 POLD3; DNA polymerase delta subunit 3
F 110758564 uncharacterized protein LOC110758564 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 110772670 DNA polymerase epsilon catalytic subunit A-like isoform X1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 110756249 DNA polymerase epsilon subunit B-like K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 110745335 LOW QUALITY PROTEIN: DNA polymerase epsilon subunit B-like K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 110769955 DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F 110771159 DNA polymerase epsilon subunit C K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E 110759255 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 110759258 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 110759356 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 110762497 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 110770551 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 110755298 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 110769443 DNA-repair protein XRCC1 isoform X1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 110763074 tyrosyl-DNA phosphodiesterase 1 isoform X1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 110768433 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 110758176 polynucleotide 3'-phosphatase ZDP K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 110770084 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 110757483 poly [ADP-ribose] polymerase 1 isoform X1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 110749328 poly [ADP-ribose] polymerase 2 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 110763307 poly [ADP-ribose] polymerase 3 isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 110755129 DNA repair protein RAD4 isoform X1 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 110757144 ubiquitin receptor RAD23c-like K10839 RAD23; UV excision repair protein RAD23
F 110757170 ubiquitin receptor RAD23c-like K10839 RAD23; UV excision repair protein RAD23
F 110769665 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F 110758238 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 110748081 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110746319 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110769275 RING-box protein 1a isoform X1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110774021 cullin-4 K10609 CUL4; cullin 4
F 110755479 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 110758733 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 110749179 uncharacterized protein LOC110749179 K15082 RAD7; DNA repair protein RAD7
F 110764286 DNA repair protein RAD16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 110761372 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 110766738 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 110749525 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 110747416 DNA-directed RNA polymerase II subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 110773624 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 110768612 DNA-directed RNA polymerases IV and V subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 110768471 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 110774334 DNA-directed RNA polymerase V subunit 5C K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 110745705 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 110745706 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 110759384 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 110761619 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 110760526 uncharacterized protein LOC110760526 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 110760358 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 110744659 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 110755249 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 110748285 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 110763912 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 110753209 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 110756314 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 110760147 DNA-directed RNA polymerases II, IV and V subunit 12-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 110746323 DNA-directed RNA polymerases II, IV and V subunit 12-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 110748081 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110746319 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110769275 RING-box protein 1a isoform X1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 110774021 cullin-4 K10609 CUL4; cullin 4
F 110755479 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 110772470 DNA excision repair protein ERCC-8 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 110757479 protein CHROMATIN REMODELING 8 isoform X1 K10841 ERCC6; DNA excision repair protein ERCC-6
F 110757607 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 110770404 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 110750748 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 110762496 DNA repair helicase XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 110749841 DNA repair helicase XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 110765766 probable RNA polymerase II transcription factor B subunit 1-3 isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 110766149 probable RNA polymerase II transcription factor B subunit 1-3 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 110771269 general transcription factor IIH subunit 2-like K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 110750614 RNA polymerase II transcription factor B subunit 4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 110766805 RNA polymerase II transcription factor B subunit 2 isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 110753654 RNA polymerase II transcription factor B subunit 5-like K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 110747017 cyclin-dependent kinase D-3 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 110745961 cyclin-H1-1 K06634 CCNH; cyclin H
E 110756952 uncharacterized protein LOC110756952 isoform X1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 110768275 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110749279 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110753318 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 110753421 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 110774535 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 110744292 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E 110744782 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Other NER factors
E 110759682 DNA excision repair protein ERCC-1 isoform X1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 110756441 DNA repair endonuclease UVH1 isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 110756460 DNA repair protein UVH3 isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 110755298 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 110760761 MMS19 nucleotide excision repair protein homolog isoform X1 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 110751287 cullin-3A K03869 CUL3; cullin 3
E 110760880 cullin-3B-like K03869 CUL3; cullin 3
E 110773466 elongin-C K03872 ELOC; elongin-C
E 110756888 uncharacterized protein LOC110756888 isoform X1 K03873 ELOB; elongin-B
E 110744482 transcription elongation factor B polypeptide 3 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 110754162 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 110767783 DNA mismatch repair protein MSH3 isoform X1 K08736 MSH3; DNA mismatch repair protein MSH3
E 110749301 LOW QUALITY PROTEIN: DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
E 110744549 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 110767094 DNA mismatch repair protein MLH1 isoform X1 K08734 MLH1; DNA mismatch repair protein MLH1
E 110761840 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 110748901 DNA mismatch repair protein MLH3 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 110751190 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 110770759 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
E 110757547 DNA polymerase delta subunit 3 K03504 POLD3; DNA polymerase delta subunit 3
E 110758564 uncharacterized protein LOC110758564 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 110768275 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110749279 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110753318 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 110753421 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 110774535 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 110744292 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E 110744782 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 110769398 replication factor C subunit 1 isoform X1 K10754 RFC1; replication factor C subunit 1
E 110750517 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 110759598 replication factor C subunit 2 isoform X1 K10755 RFC2_4; replication factor C subunit 2/4
E 110752139 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
E 110759394 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 110750574 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
E 110773723 uncharacterized protein LOC110773723 K10756 RFC3_5; replication factor C subunit 3/5
E 110756073 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 110759255 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 110759258 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 110759356 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 110762497 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 110766569 exonuclease 1 isoform X1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 110746909 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 110755298 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 110752662 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 110770156 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 110772941 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 110774500 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 110749364 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA1-core complex
E 110757424 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 110755517 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 110744811 uncharacterized protein LOC110744811 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 110766225 uncharacterized protein LOC110766225 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 110767420 BRISC and BRCA1-A complex member 2 K12173 BRE; BRCA1-A complex subunit BRE
E 110750056 uncharacterized protein LOC110750056 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
E 110760009 lys-63-specific deubiquitinase BRCC36-like K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 110768166 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 110750562 DNA topoisomerase 2-binding protein 1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 110749403 BRCT domain-containing protein At4g02110 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 110770156 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 110772941 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 110774500 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 110749364 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA complex
E 110762693 LOW QUALITY PROTEIN: protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 110749132 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 110749132 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 110752743 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 110749199 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 110762085 LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog 4 K10871 RAD51L3; RAD51-like protein 3
E 110754575 DNA repair protein XRCC2 homolog isoform X1 K10879 XRCC2; DNA-repair protein XRCC2
E 110745530 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
E 110747748 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
E 110752129 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
E 110772727 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
E 110769759 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
E 110757388 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
E 110772345 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 110755913 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 110755370 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 110761775 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110772544 protein CHROMATIN REMODELING 25 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110768492 protein CHROMATIN REMODELING 35-like isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110756292 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110754546 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 110768535 protein CHROMATIN REMODELING 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 110766356 mediator of RNA polymerase II transcription subunit 34 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 110762890 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 110759223 ATP-dependent DNA helicase Q-like SIM K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 110761047 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110749189 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110753095 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 110761047 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110749189 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110754242 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 110749045 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 110760363 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 110755306 recQ-mediated genome instability protein 2 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 110768275 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110749279 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 110753318 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 110753421 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 110774535 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 110744292 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
E 110744782 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 110766639 serine/threonine-protein phosphatase PP-X isozyme 2 isoform X1 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 110766642 serine/threonine-protein phosphatase PP-X isozyme 2-like K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 110749677 serine/threonine-protein phosphatase 4 regulatory subunit 2-B K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 110763924 serine/threonine-protein phosphatase 4 regulatory subunit 3 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 110767794 uncharacterized protein LOC110767794 K19022 AP5B1; AP-5 complex subunit beta-1
E 110748205 AP-5 complex subunit mu-like K19023 AP5M1; AP-5 complex subunit mu-1
E 110750468 AP-5 complex subunit mu K19023 AP5M1; AP-5 complex subunit mu-1
E 110751218 AP-5 complex subunit zeta-1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 110774488 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 110764752 structural maintenance of chromosomes protein 6B K22804 SMC6; structural maintenance of chromosomes protein 6
E 110766038 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 110774449 E3 SUMO-protein ligase MMS21 isoform X1 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 110770951 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 110770761 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 110771860 crossover junction endonuclease EME1B-like isoform X1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 110752491 crossover junction endonuclease MUS81-like isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 110763834 crossover junction endonuclease MUS81-like K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 110766934 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 110761851 protein DSS1 HOMOLOG ON CHROMOSOME V-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 110751723 uncharacterized protein LOC110751723 isoform X1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 110766578 uncharacterized protein LOC110766578 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 110772328 structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 110753887 uncharacterized protein LOC110753887 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 110753890 uncharacterized protein LOC110753890 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 110763767 structure-specific endonuclease subunit SLX1 homolog K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 110769248 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 110746953 protein DDB_G0268328-like K19026 SPG11; spatacsin
E 110751695 uncharacterized protein LOC110751695 K19026 SPG11; spatacsin
E 110766271 uncharacterized protein LOC110766271 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 110769982 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 110761902 protein MRG2-like K11339 MORF4L1; mortality factor 4-like protein 1
E 110753570 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 110753222 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 110764336 ATPase family AAA domain-containing protein FIGL1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 110767985 zinc finger SWIM domain-containing protein 7 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 110774351 Werner Syndrome-like exonuclease K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 110773693 uncharacterized protein LOC110773693 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 110772816 DNA-dependent metalloprotease WSS1-like isoform X1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 110751260 single-stranded DNA-binding protein WHY1, chloroplastic-like K26559 WHY1; single-stranded DNA-binding protein WHY1
E 110755909 single-stranded DNA-bindig protein WHY2, mitochondrial-like K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 110749121 ATP-dependent DNA helicase 2 subunit KU70 isoform X1 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 110766397 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 110770156 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 110772941 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11
E 110774500 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 110758437 DNA ligase 4 isoform X1 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 110745975 DNA repair protein XRCC4-like isoform X1 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 110770084 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 110768433 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 110763043 uncharacterized protein LOC110763043 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 110767159 uncharacterized protein LOC110767159 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 110747625 E3 ubiquitin-protein ligase FANCL-like isoform X1 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 110746195 E3 ubiquitin-protein ligase FANCL-like K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 110745392 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 110757451 protein MHF1 homolog K11511 APITD1; centromere protein S
E 110751501 protein MHF2 homolog K15360 STRA13; centromere protein X
E 110768302 uncharacterized protein LOC110768302 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 110761047 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110749189 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 110754242 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 110749045 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 110760363 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 110755306 recQ-mediated genome instability protein 2 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 110755665 Fanconi anemia group D2 protein homolog K10891 FANCD2; fanconi anemia group D2 protein
E 110750298 Fanconi anemia group I protein K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 110762693 LOW QUALITY PROTEIN: protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 110768166 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 110747483 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 110749132 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 110749199 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 110752161 uncharacterized protein LOC110752161 K11137 TELO2; telomere length regulation protein
E 110759726 WD repeat-containing protein 48 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 110763902 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 110755492 serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 110770915 serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 110757949 telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
E 110771412 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 110752662 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 110768190 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 110763673 DNA polymerase kappa isoform X1 K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 110767960 DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 110759771 DNA polymerase zeta catalytic subunit isoform X1 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 110752085 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 110751382 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 110751553 DNA repair protein RAD5B K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 110762447 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 110762448 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 isoform X1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 110761242 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 110762788 ubiquitin-conjugating enzyme E2 variant 1A K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 110765279 ubiquitin-conjugating enzyme E2 35 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 110770817 ubiquitin-conjugating enzyme E2 36-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 110759255 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 110759258 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 110759356 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 110762497 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 110759224 cell cycle checkpoint control protein RAD9A K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 110767427 uncharacterized protein LOC110767427 isoform X1 K10903 HUS1; HUS1 checkpoint protein
D 110756512 uncharacterized protein LOC110756512 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 110748653 cell cycle checkpoint protein RAD17-like K06662 HRAD17; cell cycle checkpoint protein
D 110750517 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 110759598 replication factor C subunit 2 isoform X1 K10755 RFC2_4; replication factor C subunit 2/4
D 110752139 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D 110759394 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 110750574 replication factor C subunit 3 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D 110773723 uncharacterized protein LOC110773723 K10756 RFC3_5; replication factor C subunit 3/5
D 110756073 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 110756512 uncharacterized protein LOC110756512 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 110767757 protein timeless homolog isoform X1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 110754570 chromosome segregation in meiosis protein 3-like K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 110752161 uncharacterized protein LOC110752161 K11137 TELO2; telomere length regulation protein
D 110768988 uncharacterized protein LOC110768988 K20403 TTI1; TELO2-interacting protein 1
D 110763337 uncharacterized protein At2g39910 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 110752600 uncharacterized protein LOC110752600 isoform X1 K23390 BAG6; large proline-rich protein BAG6
D 110760561 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 110753797 serine/threonine-protein kinase ATR K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 110766866 serine/threonine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 110774226 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 110744585 14-3-3-like protein GF14 kappa K06630 YWHAE; 14-3-3 protein epsilon
D 110751924 14-3-3-like protein isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 110754900 14-3-3-like protein C K06630 YWHAE; 14-3-3 protein epsilon
D 110752013 14-3-3-like protein GF14 kappa K06630 YWHAE; 14-3-3 protein epsilon
D 110747936 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 110759513 14-3-3 protein 7-like K06630 YWHAE; 14-3-3 protein epsilon
D 110766973 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 110758223 14-3-3-like protein A K06630 YWHAE; 14-3-3 protein epsilon
D 110761752 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 110752319 uncharacterized protein LOC110752319 isoform X1 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 110771482 serine/threonine-protein kinase Nek6 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 110760263 serine/threonine-protein kinase Nek5 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 110759747 serine/threonine-protein kinase Nek3 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 110763475 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 110754987 protein downstream neighbor of Son K22422 DONSON; protein downstream neighbor of Son
D 110763308 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 110757840 protein SDE2 homolog K25059 SDE2; replication stress response regulator SDE2
D 110771102 protein DECREASED SIZE EXCLUSION LIMIT 1 isoform X1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 110761246 helicase and polymerase-containing protein TEBICHI K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 110751166 DNA polymerase V K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 110767699 DNA-directed primase/polymerase protein isoform X1 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 110749449 DNA cross-link repair 1A protein isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 110770580 exonuclease V, chloroplastic K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 110766293 endonuclease V K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 110762407 DNA annealing helicase and endonuclease ZRANB3 isoform X1 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 110770893 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 110764115 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 110770895 endonuclease 4-like isoform X1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 110767852 switch 2 isoform X1 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 110769336 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 110754253 cell division cycle 5-like protein isoform X1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 110747397 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 110750268 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
D 110762876 LOW QUALITY PROTEIN: protein pleiotropic regulatory locus 1-like K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 110756205 geranyl diphosphate phosphohydrolase-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110752137 geranyl diphosphate phosphohydrolase-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110757770 geranyl diphosphate phosphohydrolase-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110757700 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110757704 geranyl diphosphate phosphohydrolase-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110757723 geranyl diphosphate phosphohydrolase-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110767262 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 110750688 ribonucleoside-diphosphate reductase large subunit isoform X1 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 110747817 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 110764370 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 110750467 ribonucleoside-diphosphate reductase small chain A isoform X1 K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 110753712 deoxyribodipyrimidine photo-lyase isoform X1 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 110754573 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 110771871 probable DNA-3-methyladenine glycosylase 2 isoform X1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 110755847 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 110745919 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 110748333 adenine DNA glycosylase-like K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 110763634 uncharacterized protein LOC110763634 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110772286 uncharacterized protein LOC110772286 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110760321 uncharacterized protein LOC110760321 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110756909 uncharacterized protein LOC110756909 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110757734 uncharacterized protein LOC110757734 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 110767443 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 110766849 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 110760049 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 110770282 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 110758137 DNA polymerase I B, chloroplastic/mitochondrial-like isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 110758137 DNA polymerase I B, chloroplastic/mitochondrial-like isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 110766748 uncharacterized protein LOC110766748 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 110754056 single-stranded DNA-binding protein, mitochondrial isoform X1 K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 110749288 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 110765121 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 110749288 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 110765121 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
E 110745098 uncharacterized protein LOC110745098 K04485 radA; DNA repair protein RadA/Sms
E 110765451 ATP-dependent DNA helicase homolog RECG, chloroplastic K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 110749892 DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 110763536 DNA gyrase subunit B, chloroplastic/mitochondrial-like K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 110750830 uncharacterized protein LOC110750830 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 110749288 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D 110765121 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
D 110754056 single-stranded DNA-binding protein, mitochondrial isoform X1 K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 110756205 geranyl diphosphate phosphohydrolase-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110752137 geranyl diphosphate phosphohydrolase-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110757770 geranyl diphosphate phosphohydrolase-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110757700 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110757704 geranyl diphosphate phosphohydrolase-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110757723 geranyl diphosphate phosphohydrolase-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 110767262 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024