+D GENES KO
#
KEGG Orthology (KO) - Pseudomonas brenneri
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pbre00010]
D QDY63_23045 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D QDY63_05265 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D QDY63_03070 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D QDY63_27850 fba; (GenBank) fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D QDY63_05185 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D QDY63_20600 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D QDY63_23055 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D QDY63_27865 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D QDY63_02995 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D QDY63_07315 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D QDY63_09375 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D QDY63_22975 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D QDY63_21125 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D QDY63_03635 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_12100 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_14135 mdeB; (GenBank) alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_03630 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_07335 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D QDY63_07880 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D QDY63_21475 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D QDY63_18820 exaA; (GenBank) quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_18800 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D QDY63_26010 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D QDY63_05260 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_15255 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_21975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_15625 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D QDY63_00495 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D QDY63_17050 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D QDY63_02610 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D QDY63_01625 cytochrome c K06150 E1.1.99.3; gluconate 2-dehydrogenase (acceptor) , cytochrome c subunit [EC:1.1.99.3]
C 00020 Citrate cycle (TCA cycle) [PATH:pbre00020]
D QDY63_09465 gltA; (GenBank) citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D QDY63_21185 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D QDY63_20725 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D QDY63_13640 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D QDY63_18340 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D QDY63_18345 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D QDY63_09490 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D QDY63_09495 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_09510 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D QDY63_09505 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D QDY63_01905 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D QDY63_09480 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D QDY63_09485 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D QDY63_09470 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D QDY63_09475 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D QDY63_22990 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D QDY63_20065 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D QDY63_24695 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D QDY63_09945 mqo; (GenBank) malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D QDY63_24550 mqo; (GenBank) malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D QDY63_00615 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D QDY63_00610 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D QDY63_02610 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D QDY63_03635 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_12100 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_14135 mdeB; (GenBank) alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_03630 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pbre00030]
D QDY63_05265 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D QDY63_16405 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D QDY63_22310 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D QDY63_22305 pgl; (GenBank) 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D QDY63_13495 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D QDY63_16410 gnd; (GenBank) decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D QDY63_26955 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D QDY63_13205 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D QDY63_13210 transketolase C-terminal domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D QDY63_27875 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D QDY63_13170 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D QDY63_20505 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D QDY63_28430 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D QDY63_17650 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D QDY63_10655 rbsK; (GenBank) ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D QDY63_15625 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D QDY63_09325 phnN; (GenBank) phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D QDY63_05760 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D QDY63_23050 edd; (GenBank) phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D QDY63_22300 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D QDY63_17050 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D QDY63_23840 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D QDY63_21300 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D QDY63_01620 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D QDY63_01615 gluconate 2-dehydrogenase subunit 3 family protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D QDY63_01625 cytochrome c K06150 E1.1.99.3; gluconate 2-dehydrogenase (acceptor) , cytochrome c subunit [EC:1.1.99.3]
D QDY63_24275 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D QDY63_15675 sugar kinase K11441 kguK; dehydrogluconokinase [EC:2.7.1.13]
D QDY63_15665 D-glycerate dehydrogenase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43]
D QDY63_22205 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D QDY63_17595 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D QDY63_09380 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D QDY63_05955 trxB; (GenBank) thioredoxin-disulfide reductase K22345 E4.3.1.9; glucosaminate ammonia-lyase [EC:4.3.1.9]
D QDY63_27850 fba; (GenBank) fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D QDY63_03070 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:pbre00040]
D QDY63_16055 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D QDY63_14560 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D QDY63_26955 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D QDY63_11780 FGGY-family carbohydrate kinase K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D QDY63_15830 xylB; (GenBank) xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D QDY63_18055 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D QDY63_21275 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D QDY63_24815 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D QDY63_07865 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:pbre00051]
D QDY63_15825 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D QDY63_19040 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D QDY63_24220 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D QDY63_07865 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D QDY63_16880 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D QDY63_16900 SDR family NAD(P)-dependent oxidoreductase K18337 LRA1; L-rhamnose 1-dehydrogenase [EC:1.1.1.378 1.1.1.377 1.1.1.173]
D QDY63_16865 rhmD; (GenBank) L-rhamnonate dehydratase K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90]
D QDY63_03070 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D QDY63_25070 pfkB; (GenBank) 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D QDY63_15835 mannitol dehydrogenase family protein K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67]
D QDY63_24165 nucleotide sugar dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D QDY63_24170 alg8; (GenBank) mannuronan synthase K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D QDY63_24175 alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33]
D QDY63_24190 algG; (GenBank) mannuronan 5-epimerase AlgG K01795 algG; mannuronan 5-epimerase [EC:5.1.3.37]
D QDY63_24200 mannuronate-specific alginate lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D QDY63_27850 fba; (GenBank) fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D QDY63_05185 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D QDY63_17650 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D QDY63_25065 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D QDY63_10595 HAD family hydrolase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
C 00052 Galactose metabolism [PATH:pbre00052]
D QDY63_03725 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D QDY63_19875 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D QDY63_14560 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D QDY63_15625 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D QDY63_23045 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D QDY63_01525 dgoD; (GenBank) galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D QDY63_01515 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D QDY63_01520 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
C 00053 Ascorbate and aldarate metabolism [PATH:pbre00053]
D QDY63_16055 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D QDY63_21300 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_21285 L-rhamnonate dehydratase K25260 lxyD; L-lyxonate dehydratase [EC:4.2.1.176]
D QDY63_18055 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D QDY63_21275 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D QDY63_24820 kdgD; (GenBank) 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D QDY63_24805 garD; (GenBank) galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D QDY63_22220 NAD(P)-dependent oxidoreductase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:pbre00500]
D QDY63_14560 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D QDY63_07815 bglX; (GenBank) beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D QDY63_16990 EAL domain-containing protein K02761 celB; cellobiose PTS system EIIC component
D QDY63_16000 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D QDY63_15960 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D QDY63_03055 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D QDY63_15955 treS; (GenBank) maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D QDY63_15990 malQ; (GenBank) 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D QDY63_15950 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D QDY63_15975 glgX; (GenBank) glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D QDY63_15985 malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D QDY63_15995 treZ; (GenBank) malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D QDY63_06730 treP; (GenBank) PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D QDY63_06735 treC; (GenBank) alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D QDY63_15625 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D QDY63_23045 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D QDY63_05265 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D QDY63_15825 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:pbre00620]
D QDY63_05260 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_15255 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_21975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_03635 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_12100 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_14135 mdeB; (GenBank) alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_03630 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_07880 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D QDY63_07335 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D QDY63_21475 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D QDY63_18820 exaA; (GenBank) quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D QDY63_05915 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D QDY63_09375 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D QDY63_22975 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D QDY63_07295 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D QDY63_04410 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D QDY63_04405 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D QDY63_10475 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_18800 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D QDY63_26010 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D QDY63_01905 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D QDY63_22595 lldD; (GenBank) FMN-dependent L-lactate dehydrogenase LldD K29125 lldD; L-lactate dehydrogenase (quinone) [EC:1.1.5.15]
D QDY63_21675 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D QDY63_05075 FAD-binding and (Fe-S)-binding domain-containing protein K18930 dld; D-lactate dehydrogenase
D QDY63_16875 aldA; (GenBank) aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D QDY63_14905 gloA; (GenBank) lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D QDY63_16610 gloB; (GenBank) hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D QDY63_24455 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D QDY63_24275 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D QDY63_03355 malic enzyme-like NAD(P)-binding protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D QDY63_00615 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D QDY63_00610 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D QDY63_28450 fumarylacetoacetate hydrolase family protein K29029 FAHD2; oxaloacetate tautomerase [EC:5.3.2.2]
D QDY63_09945 mqo; (GenBank) malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D QDY63_24550 mqo; (GenBank) malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D QDY63_22990 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D QDY63_20065 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D QDY63_24695 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D QDY63_07060 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D QDY63_02610 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D QDY63_21125 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D QDY63_27455 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_06665 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pbre00630]
D QDY63_18390 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D QDY63_27455 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D QDY63_09465 gltA; (GenBank) citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D QDY63_21185 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D QDY63_20725 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D QDY63_13640 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D QDY63_05260 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_15255 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_21975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_22280 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D QDY63_01715 katE; (GenBank) catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D QDY63_09745 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D QDY63_12200 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D QDY63_25515 katB; (GenBank) catalase KatB K03781 katE; catalase [EC:1.11.1.6]
D QDY63_26590 catalase K03781 katE; catalase [EC:1.11.1.6]
D QDY63_24275 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D QDY63_24490 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D QDY63_01590 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D QDY63_21590 HAD-IIIA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D QDY63_26950 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D QDY63_20270 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D QDY63_03035 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_08380 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_12465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_18775 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28560 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_25480 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D QDY63_27585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D QDY63_22560 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D QDY63_22570 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D QDY63_28680 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_22555 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D QDY63_28675 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D QDY63_09395 gcl; (GenBank) glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D QDY63_09390 hyi; (GenBank) hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D QDY63_09385 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D QDY63_15095 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D QDY63_09380 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D QDY63_16875 aldA; (GenBank) aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D QDY63_19135 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D QDY63_22300 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D QDY63_04790 kynB; (GenBank) arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D QDY63_22785 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D QDY63_27560 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D QDY63_03175 hutG; (GenBank) N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:pbre00640]
D QDY63_05260 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_15255 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_21975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_05915 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D QDY63_12600 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D QDY63_12595 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D QDY63_12590 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_15270 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D QDY63_20670 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D QDY63_21380 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D QDY63_07295 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D QDY63_04410 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D QDY63_04405 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D QDY63_10475 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D QDY63_23625 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D QDY63_04695 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D QDY63_15585 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D QDY63_09505 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D QDY63_09510 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D QDY63_04700 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D QDY63_04775 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D QDY63_21185 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D QDY63_21170 prpD; (GenBank) 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D QDY63_21180 acnD; (GenBank) Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D QDY63_21175 prpF; (GenBank) 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D QDY63_20725 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D QDY63_13640 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D QDY63_21190 prpB; (GenBank) methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D QDY63_18390 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
C 00650 Butanoate metabolism [PATH:pbre00650]
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_08255 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D QDY63_08215 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D QDY63_20670 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D QDY63_21380 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D QDY63_15270 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D QDY63_09970 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D QDY63_22280 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D QDY63_03300 phaC; (GenBank) class II poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D QDY63_03310 phaC; (GenBank) class II poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D QDY63_07650 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D QDY63_07655 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D QDY63_19135 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D QDY63_09480 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D QDY63_09485 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D QDY63_09470 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D QDY63_09475 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D QDY63_02255 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D QDY63_23625 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D QDY63_02250 gabD; (GenBank) NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D QDY63_14175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D QDY63_10315 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D QDY63_01905 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D QDY63_12260 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D QDY63_12900 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D QDY63_12410 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D QDY63_12405 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D QDY63_17580 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D QDY63_17575 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D QDY63_05375 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D QDY63_06290 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D QDY63_05380 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pbre00660]
D QDY63_05375 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D QDY63_06290 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D QDY63_05380 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D QDY63_13695 CaiB/BaiF CoA-transferase family protein K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D QDY63_09505 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D QDY63_09510 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D QDY63_13680 MaoC family dehydratase N-terminal domain-containing protein K18291 ich-P; itaconyl-CoA hydratase / mesaconyl-C4 CoA hydratase [EC:4.2.1.56 4.2.1.-]
D QDY63_13700 CoA ester lyase K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D QDY63_10425 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D QDY63_10430 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D QDY63_10440 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pbre00562]
D QDY63_06555 suhB; (GenBank) inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D QDY63_12710 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D QDY63_12695 iolE; (GenBank) myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D QDY63_12705 iolD; (GenBank) 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D QDY63_12700 iolB; (GenBank) 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D QDY63_12690 iolC; (GenBank) 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D QDY63_04700 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D QDY63_04775 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D QDY63_05185 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00566 Sulfoquinovose metabolism
D QDY63_22355 AGE family epimerase/isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pbre00190]
D QDY63_18395 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D QDY63_18400 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D QDY63_18405 nuoC; (GenBank) NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D QDY63_18410 nuoE; (GenBank) NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D QDY63_18415 nuoF; (GenBank) NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D QDY63_18420 nuoG; (GenBank) NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D QDY63_18425 nuoH; (GenBank) NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D QDY63_18430 nuoI; (GenBank) NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D QDY63_18435 nuoJ; (GenBank) NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D QDY63_18440 nuoK; (GenBank) NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D QDY63_18445 nuoL; (GenBank) NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D QDY63_18450 nuoM; (GenBank) NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D QDY63_18455 nuoN; (GenBank) NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D QDY63_25265 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D QDY63_09480 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D QDY63_09485 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D QDY63_09470 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D QDY63_09475 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D QDY63_24860 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D QDY63_24855 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D QDY63_24850 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D QDY63_01690 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D QDY63_06240 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D QDY63_06235 cyoD; (GenBank) cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D QDY63_01665 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D QDY63_01655 ctaD; (GenBank) cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D QDY63_01650 coxB; (GenBank) cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D QDY63_01660 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D QDY63_01685 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D QDY63_15120 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D QDY63_20800 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D QDY63_20820 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D QDY63_20805 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D QDY63_20825 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D QDY63_20810 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D QDY63_20830 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D QDY63_20815 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D QDY63_20835 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D QDY63_06230 cyoC; (GenBank) cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D QDY63_06225 cyoB; (GenBank) cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D QDY63_06220 cyoA; (GenBank) ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D QDY63_25550 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D QDY63_25545 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D QDY63_06370 cytochrome c family protein K08738 CYC; cytochrome c
D QDY63_08360 cache domain-containing protein K08738 CYC; cytochrome c
D QDY63_16930 c-type cytochrome K08738 CYC; cytochrome c
D QDY63_01265 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D QDY63_01255 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D QDY63_01260 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D QDY63_01270 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D QDY63_01250 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D QDY63_01285 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D QDY63_01275 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D QDY63_01280 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D QDY63_26045 ppa; (GenBank) inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D QDY63_28870 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pbre00710]
D QDY63_27865 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D QDY63_20600 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D QDY63_23055 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D QDY63_27850 fba; (GenBank) fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D QDY63_03070 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D QDY63_13205 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D QDY63_13210 transketolase C-terminal domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D QDY63_27875 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D QDY63_28430 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D QDY63_17650 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D QDY63_05185 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D QDY63_26955 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D QDY63_13170 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D QDY63_20505 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D QDY63_07060 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D QDY63_02610 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D QDY63_03355 malic enzyme-like NAD(P)-binding protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
C 00720 Other carbon fixation pathways [PATH:pbre00720]
D QDY63_21125 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D QDY63_07060 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D QDY63_00615 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D QDY63_00610 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D QDY63_22990 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D QDY63_20065 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D QDY63_24695 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D QDY63_09480 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D QDY63_09485 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D QDY63_09470 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D QDY63_09475 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D QDY63_09510 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D QDY63_09505 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_18340 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D QDY63_18345 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D QDY63_20725 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D QDY63_13640 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D QDY63_07295 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D QDY63_04410 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D QDY63_04405 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D QDY63_10475 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D QDY63_12030 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D QDY63_27940 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D QDY63_05915 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D QDY63_05260 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_15255 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_21975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:pbre00680]
D QDY63_27555 fdhA; (GenBank) formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D QDY63_07335 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D QDY63_07340 fghA; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D QDY63_25480 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D QDY63_27585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D QDY63_24490 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D QDY63_09380 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D QDY63_07315 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D QDY63_07060 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D QDY63_27850 fba; (GenBank) fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D QDY63_03070 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D QDY63_14165 fae; (GenBank) formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D QDY63_05915 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D QDY63_05260 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_15255 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_21975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_21125 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D QDY63_02995 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D QDY63_28460 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D QDY63_19990 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D QDY63_03845 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D QDY63_24800 HAD-IB family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D QDY63_21230 thrH; (GenBank) bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:pbre00910]
D QDY63_16795 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D QDY63_16800 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D QDY63_21060 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D QDY63_16790 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D QDY63_16785 narH; (GenBank) nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D QDY63_16775 narI; (GenBank) respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D QDY63_21080 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D QDY63_21070 nirB; (GenBank) nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D QDY63_21075 nirD; (GenBank) nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D QDY63_16925 nirS; (GenBank) nitrite reductase K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D QDY63_14195 cbb3-type cytochrome c oxidase subunit I K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D QDY63_14190 cytochrome c K02305 norC; nitric oxide reductase subunit C
D QDY63_13725 nosZ; (GenBank) TAT-dependent nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D QDY63_08290 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D QDY63_14505 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D QDY63_26885 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D QDY63_18215 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D QDY63_13570 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D QDY63_25460 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D QDY63_03035 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_08380 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_12465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_18775 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28560 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_03405 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D QDY63_03410 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D QDY63_08365 cynS; (GenBank) cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D QDY63_22535 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D QDY63_01635 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D QDY63_05470 can; (GenBank) carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D QDY63_08370 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pbre00920]
D QDY63_09355 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D QDY63_02285 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D QDY63_02290 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D QDY63_02295 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D QDY63_02300 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D QDY63_02555 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D QDY63_28620 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D QDY63_02545 tauC; (GenBank) taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D QDY63_02550 tauB; (GenBank) taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D QDY63_02540 tauD; (GenBank) taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D QDY63_02040 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D QDY63_02345 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D QDY63_28600 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D QDY63_02050 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D QDY63_02340 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D QDY63_28590 ssuC; (GenBank) aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D QDY63_02045 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D QDY63_02335 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D QDY63_28585 ssuB; (GenBank) aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D QDY63_19240 ssuD; (GenBank) FMNH2-dependent alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D QDY63_28595 ssuD; (GenBank) FMNH2-dependent alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D QDY63_28605 ssuE; (GenBank) NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D QDY63_05905 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D QDY63_05900 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D QDY63_02675 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D QDY63_21235 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D QDY63_18810 quinoprotein dehydrogenase-associated SoxYZ-like carrier K17226 soxY; sulfur-oxidizing protein SoxY
D QDY63_25055 sulfite reductase flavoprotein subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D QDY63_16545 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D QDY63_12620 FAD/NAD(P)-binding oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D QDY63_13995 FAD/NAD(P)-binding oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D QDY63_06295 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D QDY63_14540 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D QDY63_03855 rhdA; (GenBank) thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D QDY63_28260 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D QDY63_27045 glpE; (GenBank) thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D QDY63_02530 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D QDY63_06565 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D QDY63_21155 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D QDY63_08495 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D QDY63_21150 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D QDY63_28165 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D QDY63_10500 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D QDY63_15770 sfnG; (GenBank) dimethyl sulfone monooxygenase SfnG K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]
D QDY63_27380 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D QDY63_27385 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D QDY63_27395 phenylacyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D QDY63_13240 isoprenylcysteine carboxylmethyltransferase family protein K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pbre00061]
D QDY63_07295 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D QDY63_04410 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D QDY63_04405 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D QDY63_10475 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D QDY63_02885 acyl carrier protein K02078 acpP; acyl carrier protein
D QDY63_03520 acyl carrier protein K02078 acpP; acyl carrier protein
D QDY63_03525 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D QDY63_21550 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D QDY63_25685 acyl carrier protein K02078 acpP; acyl carrier protein
D QDY63_21560 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D QDY63_08995 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D QDY63_03450 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D QDY63_09580 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D QDY63_03435 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D QDY63_21545 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D QDY63_03440 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_04595 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_11560 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_13445 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_19145 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_21260 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_21555 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23185 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23865 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23870 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_09585 fabA; (GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D QDY63_07270 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D QDY63_09970 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D QDY63_09620 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_13460 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22265 fadD1; (GenBank) long-chain-fatty-acid--CoA ligase FadD1 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22270 fadD2; (GenBank) long-chain-fatty-acid--CoA ligase FadD2 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pbre00071]
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_08265 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20120 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20665 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20670 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D QDY63_21380 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D QDY63_08215 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D QDY63_15270 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D QDY63_12275 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D QDY63_13685 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D QDY63_20895 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D QDY63_24880 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D QDY63_09805 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D QDY63_13440 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D QDY63_01930 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D QDY63_09620 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_13460 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22265 fadD1; (GenBank) long-chain-fatty-acid--CoA ligase FadD1 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22270 fadD2; (GenBank) long-chain-fatty-acid--CoA ligase FadD2 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_13420 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D QDY63_00395 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D QDY63_07335 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D QDY63_07880 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:pbre00074]
D QDY63_21755 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D QDY63_02885 acyl carrier protein K02078 acpP; acyl carrier protein
D QDY63_03520 acyl carrier protein K02078 acpP; acyl carrier protein
D QDY63_03525 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D QDY63_21550 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D QDY63_25685 acyl carrier protein K02078 acpP; acyl carrier protein
D QDY63_21560 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pbre00561]
D QDY63_15095 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D QDY63_09380 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_21475 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D QDY63_17680 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D QDY63_17685 dhaL; (GenBank) dihydroxyacetone kinase subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D QDY63_13215 FGGY-family carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D QDY63_14325 FGGY family carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D QDY63_23555 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D QDY63_07130 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D QDY63_21565 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D QDY63_27080 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D QDY63_01380 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D QDY63_21365 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D QDY63_23285 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D QDY63_04185 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:pbre00564]
D QDY63_09605 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D QDY63_14315 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D QDY63_23565 glpD; (GenBank) glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D QDY63_26130 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D QDY63_07130 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D QDY63_27080 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D QDY63_01380 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D QDY63_21365 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D QDY63_23285 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D QDY63_20580 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D QDY63_22080 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D QDY63_28320 haloacid dehalogenase-like hydrolase K21830 pchP; phosphoethanolamine/phosphocholine phosphatase [EC:3.1.3.75]
D QDY63_26020 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D QDY63_26025 eutC; (GenBank) ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D QDY63_00825 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D QDY63_07240 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D QDY63_14125 CDP-alcohol phosphatidyltransferase family protein K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D QDY63_15390 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D QDY63_05390 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D QDY63_03850 asd; (GenBank) archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D QDY63_17500 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D QDY63_00775 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D QDY63_07810 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D QDY63_00070 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism
D QDY63_26135 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
C 00600 Sphingolipid metabolism
D QDY63_15140 arylsulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:pbre00592]
D QDY63_08265 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20120 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20665 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:pbre01040]
D QDY63_02270 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D QDY63_19720 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D QDY63_25650 tesB; (GenBank) acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20]
D QDY63_00490 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pbre00230]
D QDY63_03780 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D QDY63_02670 nudE; (GenBank) ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D QDY63_15625 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D QDY63_05760 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D QDY63_10495 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D QDY63_04370 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D QDY63_08750 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D QDY63_06830 purT; (GenBank) formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D QDY63_06760 purL; (GenBank) phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D QDY63_08755 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D QDY63_00510 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D QDY63_00515 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D QDY63_08110 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D QDY63_18370 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D QDY63_04380 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D QDY63_20890 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D QDY63_19680 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D QDY63_07355 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D QDY63_02665 yrfG; (GenBank) GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D QDY63_19420 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D QDY63_25295 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D QDY63_24565 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D QDY63_06700 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D QDY63_06610 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D QDY63_28180 rdgB; (GenBank) RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D QDY63_00010 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D QDY63_20975 xdhA; (GenBank) xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D QDY63_20980 xdhB; (GenBank) xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D QDY63_06705 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D QDY63_02380 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D QDY63_20990 guaD; (GenBank) guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D QDY63_00160 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D QDY63_21770 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D QDY63_14160 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D QDY63_22000 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D QDY63_16755 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D QDY63_19520 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D QDY63_00170 spoT; (GenBank) bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D QDY63_28860 ppx; (GenBank) exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D QDY63_08725 relA; (GenBank) GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D QDY63_29005 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D QDY63_03950 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D QDY63_25770 amn; (GenBank) AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D QDY63_09965 ppnN; (GenBank) nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D QDY63_04655 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D QDY63_07065 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D QDY63_08730 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D QDY63_03790 cpdA; (GenBank) 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D QDY63_27040 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D QDY63_05905 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D QDY63_05900 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D QDY63_20295 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D QDY63_20305 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D QDY63_21245 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D QDY63_20300 puuE; (GenBank) allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D QDY63_20310 alc; (GenBank) allantoicase K01477 alc; allantoicase [EC:3.5.3.4]
D QDY63_20315 ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D QDY63_04225 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D QDY63_04230 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D QDY63_04245 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D QDY63_22535 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:pbre00240]
D QDY63_05145 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D QDY63_05140 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D QDY63_28125 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D QDY63_00765 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D QDY63_23495 pyrC; (GenBank) dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D QDY63_28130 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D QDY63_21030 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D QDY63_00135 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D QDY63_09650 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D QDY63_07225 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D QDY63_06610 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D QDY63_08730 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D QDY63_24735 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D QDY63_27830 M48 family metallopeptidase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D QDY63_07305 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D QDY63_14665 hypothetical protein K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D QDY63_19970 cmk; (GenBank) (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D QDY63_19680 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D QDY63_07355 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D QDY63_19420 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D QDY63_24570 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D QDY63_28120 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D QDY63_09965 ppnN; (GenBank) nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D QDY63_18710 codA; (GenBank) cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D QDY63_16755 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D QDY63_07380 dcd; (GenBank) dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D QDY63_21770 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D QDY63_14160 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D QDY63_22000 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D QDY63_21530 tmk; (GenBank) dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D QDY63_00115 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D QDY63_28390 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D QDY63_14675 thyX; (GenBank) FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D QDY63_11995 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D QDY63_11990 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D QDY63_12000 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D QDY63_11845 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D QDY63_12010 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D QDY63_13135 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D QDY63_11570 flavin reductase K09024 rutF; flavin reductase [EC:1.5.1.-]
D QDY63_17345 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pbre00250]
D QDY63_08940 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D QDY63_08050 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D QDY63_00535 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D QDY63_10630 asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D QDY63_02900 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D QDY63_20140 N-acetylglutaminylglutamine amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D QDY63_06660 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D QDY63_19570 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D QDY63_00525 aspA; (GenBank) aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D QDY63_23485 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D QDY63_28985 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D QDY63_03950 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D QDY63_18370 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D QDY63_28125 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D QDY63_02255 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D QDY63_23625 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D QDY63_02250 gabD; (GenBank) NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D QDY63_14175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D QDY63_10315 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D QDY63_03405 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D QDY63_03410 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D QDY63_13570 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D QDY63_25460 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D QDY63_03590 putA; (GenBank) trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D QDY63_03035 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_08380 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_12465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_18775 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28560 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_05145 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D QDY63_05140 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D QDY63_01235 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D QDY63_06785 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D QDY63_10495 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pbre00260]
D QDY63_21880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D QDY63_10445 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D QDY63_06890 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D QDY63_01745 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D QDY63_21230 thrH; (GenBank) bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D QDY63_06895 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D QDY63_21890 ltaE; (GenBank) low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D QDY63_27600 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D QDY63_25480 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D QDY63_27585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D QDY63_24490 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D QDY63_24275 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D QDY63_15095 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D QDY63_09380 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D QDY63_02995 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D QDY63_28460 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D QDY63_19990 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D QDY63_03845 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D QDY63_24800 HAD-IB family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D QDY63_22560 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D QDY63_22570 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D QDY63_28680 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_22555 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D QDY63_28675 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D QDY63_15390 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D QDY63_05390 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D QDY63_27770 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D QDY63_09740 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D QDY63_27765 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D QDY63_27630 gbcA; (GenBank) glycine-betaine demethylase subunit GbcA K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D QDY63_27625 gbcB; (GenBank) glycine-betaine demethylase subunit GbcB K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D QDY63_27675 dgcA; (GenBank) dimethylglycine demethylation protein DgcA K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
D QDY63_27670 dgcB; (GenBank) dimethylglycine demethylation protein DgcB K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
D QDY63_27665 electron transfer flavoprotein subunit alpha/FixB family protein K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha
D QDY63_27660 electron transfer flavoprotein subunit beta K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta
D QDY63_27570 sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D QDY63_27580 sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D QDY63_27565 soxG; (GenBank) sarcosine oxidase subunit gamma family protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D QDY63_27575 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D QDY63_12855 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D QDY63_06105 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D QDY63_22565 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D QDY63_27735 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D QDY63_15800 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D QDY63_28425 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D QDY63_15105 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D QDY63_27845 alr; (GenBank) alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D QDY63_01535 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D QDY63_01540 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D QDY63_19310 aspartate aminotransferase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
C 00270 Cysteine and methionine metabolism [PATH:pbre00270]
D QDY63_02530 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D QDY63_06565 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D QDY63_21155 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D QDY63_08495 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D QDY63_21150 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D QDY63_16830 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D QDY63_12855 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D QDY63_16525 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D QDY63_13280 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D QDY63_27885 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D QDY63_25295 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D QDY63_20005 TRZ/ATZ family hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D QDY63_20000 mtnA; (GenBank) S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D QDY63_20210 acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D QDY63_10330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D QDY63_11715 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D QDY63_19540 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D QDY63_02785 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D QDY63_10775 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D QDY63_27935 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D QDY63_21880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D QDY63_10445 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D QDY63_06890 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D QDY63_28165 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D QDY63_10500 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D QDY63_12580 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D QDY63_02560 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
D QDY63_08940 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D QDY63_03855 rhdA; (GenBank) thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D QDY63_28260 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D QDY63_15105 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D QDY63_27845 alr; (GenBank) alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D QDY63_02525 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D QDY63_07505 PLP-dependent cysteine synthase family protein K28981 cds1; L-cysteine desulfidase [EC:4.4.1.28]
D QDY63_06105 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D QDY63_22565 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D QDY63_27735 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D QDY63_08715 cysM; (GenBank) cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D QDY63_28460 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D QDY63_19990 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pbre00280]
D QDY63_12580 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D QDY63_06065 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D QDY63_12600 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D QDY63_12595 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D QDY63_12590 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_15270 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D QDY63_12275 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D QDY63_13685 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D QDY63_20895 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D QDY63_12250 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D QDY63_20670 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D QDY63_21380 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D QDY63_08265 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20120 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20665 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_04780 mmsB; (GenBank) 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D QDY63_04700 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D QDY63_04775 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_04695 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D QDY63_15585 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D QDY63_23625 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D QDY63_12235 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D QDY63_12245 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D QDY63_12240 gamma-carboxygeranoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D QDY63_12260 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D QDY63_12900 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D QDY63_12410 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D QDY63_12405 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D QDY63_17580 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pbre00290]
D QDY63_15800 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D QDY63_28425 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D QDY63_10425 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D QDY63_10430 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D QDY63_10440 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D QDY63_05375 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D QDY63_06290 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D QDY63_05380 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D QDY63_05385 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D QDY63_28315 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D QDY63_12580 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D QDY63_06065 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D QDY63_19570 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D QDY63_06665 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pbre00300]
D QDY63_06890 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D QDY63_21880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D QDY63_10445 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D QDY63_07860 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D QDY63_08095 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D QDY63_05135 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D QDY63_07175 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D QDY63_09990 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D QDY63_27370 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D QDY63_07200 dapC; (GenBank) succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D QDY63_07150 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D QDY63_04960 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D QDY63_18715 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D QDY63_29035 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D QDY63_12835 alanine racemase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D QDY63_29030 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D QDY63_20270 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D QDY63_24395 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D QDY63_24390 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pbre00310]
D QDY63_04095 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D QDY63_06310 aspartate aminotransferase family protein K26062 K26062; 2-aminoadipate transaminase [EC:2.6.1.39]
D QDY63_09495 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_01930 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D QDY63_20670 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D QDY63_21380 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_27315 FAD-dependent oxidoreductase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2]
D QDY63_27605 NAD(P)/FAD-dependent oxidoreductase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2]
D QDY63_27320 carbon-nitrogen hydrolase family protein K01506 davA; 5-aminopentanamidase [EC:3.5.1.30]
D QDY63_15105 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D QDY63_27845 alr; (GenBank) alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D QDY63_02255 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D QDY63_23625 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D QDY63_02250 gabD; (GenBank) NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D QDY63_14175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D QDY63_14060 lhgO; (GenBank) L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D QDY63_17720 VOC family protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D QDY63_01935 CaiB/BaiF CoA-transferase family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D QDY63_10040 CaiB/BaiF CoA-transferase family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D QDY63_16340 Ldh family oxidoreductase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21]
D QDY63_04100 FAD-binding oxidoreductase K26065 amaA; L-pipecolate oxidase
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pbre00220]
D QDY63_22530 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D QDY63_23530 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D QDY63_23485 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D QDY63_28985 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D QDY63_04225 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D QDY63_04230 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D QDY63_04245 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D QDY63_22525 arcA; (GenBank) arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D QDY63_10630 asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D QDY63_03035 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_08380 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_12465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_18775 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28560 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_05145 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D QDY63_05140 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D QDY63_22535 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D QDY63_13570 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D QDY63_25460 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D QDY63_08940 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D QDY63_19570 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D QDY63_28625 argA; (GenBank) amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D QDY63_22755 argJ; (GenBank) bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D QDY63_00125 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D QDY63_05600 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D QDY63_26875 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D QDY63_09990 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D QDY63_27370 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D QDY63_28630 argE; (GenBank) acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pbre00330]
D QDY63_13310 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D QDY63_18710 codA; (GenBank) cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D QDY63_16585 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D QDY63_04450 speA; (GenBank) arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D QDY63_02720 aguA; (GenBank) agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D QDY63_10075 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D QDY63_10090 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D QDY63_02715 aguB; (GenBank) N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D QDY63_10080 aguB; (GenBank) N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D QDY63_25015 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D QDY63_13270 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D QDY63_28555 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_00080 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D QDY63_06260 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D QDY63_08680 speB; (GenBank) agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D QDY63_07795 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_11530 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_11905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_21920 astA; (GenBank) arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D QDY63_21925 aruF; (GenBank) arginine/ornithine succinyltransferase subunit alpha K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D QDY63_21910 astB; (GenBank) N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D QDY63_21935 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D QDY63_21915 astD; (GenBank) succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D QDY63_21900 astE; (GenBank) succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D QDY63_00055 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D QDY63_10525 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D QDY63_11645 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D QDY63_18765 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D QDY63_28155 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D QDY63_03590 putA; (GenBank) trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D QDY63_12565 ornithine cyclodeaminase K01750 ocd; ornithine cyclodeaminase [EC:4.3.1.12]
D QDY63_25385 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D QDY63_25935 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D QDY63_03185 pip; (GenBank) prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D QDY63_08940 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pbre00340]
D QDY63_24590 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D QDY63_03945 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D QDY63_03255 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D QDY63_00755 hisI; (GenBank) phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D QDY63_03260 hisI; (GenBank) phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D QDY63_02965 hisA; (GenBank) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D QDY63_02955 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D QDY63_02970 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D QDY63_02950 hisB; (GenBank) imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D QDY63_12850 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_19980 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_24580 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_20415 HAD-IB family hydrolase K28842 E3.1.3.15; histidinol-phosphatase [EC:3.1.3.15]
D QDY63_28415 HAD-IB family hydrolase K28842 E3.1.3.15; histidinol-phosphatase [EC:3.1.3.15]
D QDY63_24585 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D QDY63_03150 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D QDY63_03155 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D QDY63_03495 aromatic amino acid ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D QDY63_03125 hutU; (GenBank) urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D QDY63_03170 hutI; (GenBank) imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D QDY63_03110 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D QDY63_03175 hutG; (GenBank) N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_02560 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
C 00350 Tyrosine metabolism [PATH:pbre00350]
D QDY63_08940 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D QDY63_12850 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_19980 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_24580 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_10330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D QDY63_14960 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D QDY63_06040 hmgA; (GenBank) homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D QDY63_06050 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D QDY63_06045 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D QDY63_11500 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D QDY63_11615 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D QDY63_07335 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D QDY63_07880 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D QDY63_17130 flavin-dependent monooxygenase K23492 C2-hpah; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D QDY63_17125 flavin reductase K23470 C1-hpah; 4-hydroxyphenylacetate 3-hydroxylase, reductase component [EC:1.5.1.36]
D QDY63_11675 hpaD; (GenBank) 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D QDY63_11680 hpaE; (GenBank) 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D QDY63_11670 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D QDY63_11685 fumarylacetoacetate hydrolase family protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D QDY63_11690 fumarylacetoacetate hydrolase family protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D QDY63_11660 hpaH; (GenBank) 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D QDY63_11655 hpaI; (GenBank) 4-hydroxy-2-oxoheptanedioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D QDY63_16870 HpcH/HpaI aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D QDY63_02250 gabD; (GenBank) NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D QDY63_14175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:pbre00360]
D QDY63_08950 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D QDY63_11500 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D QDY63_11615 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D QDY63_08255 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D QDY63_08940 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D QDY63_12850 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_19980 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_24580 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_10330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D QDY63_15100 GNAT family N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D QDY63_14960 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D QDY63_00040 dadA; (GenBank) D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D QDY63_27990 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D QDY63_07795 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_11530 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_11905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:pbre00380]
D QDY63_04795 kynA; (GenBank) tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D QDY63_04790 kynB; (GenBank) arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D QDY63_04850 kynU; (GenBank) kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D QDY63_09495 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_01930 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D QDY63_20670 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D QDY63_21380 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_18215 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D QDY63_07795 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_11530 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_11905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_01715 katE; (GenBank) catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D QDY63_09745 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D QDY63_12200 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D QDY63_25515 katB; (GenBank) catalase KatB K03781 katE; catalase [EC:1.11.1.6]
D QDY63_26590 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pbre00400]
D QDY63_02865 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D QDY63_17530 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D QDY63_19605 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D QDY63_19695 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D QDY63_03395 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D QDY63_04415 aroQ; (GenBank) type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D QDY63_25600 aroQ; (GenBank) type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D QDY63_25615 bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D QDY63_25605 shikimate dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]
D QDY63_01485 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D QDY63_18575 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D QDY63_15460 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8]
D QDY63_03390 aroK; (GenBank) shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D QDY63_14095 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D QDY63_19975 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D QDY63_20220 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D QDY63_26945 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D QDY63_26935 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D QDY63_26930 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D QDY63_10470 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D QDY63_26925 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D QDY63_01535 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D QDY63_01540 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D QDY63_19985 pheA; (GenBank) prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D QDY63_08940 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D QDY63_12850 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_19980 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_24580 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_10330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D QDY63_08950 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pbre00410]
D QDY63_23625 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_05270 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D QDY63_11995 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D QDY63_11990 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D QDY63_12000 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D QDY63_11845 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D QDY63_12010 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D QDY63_13135 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D QDY63_04695 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D QDY63_15585 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D QDY63_20670 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D QDY63_21380 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D QDY63_15270 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D QDY63_04700 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D QDY63_04775 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:pbre00430]
D QDY63_05570 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D QDY63_13755 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D QDY63_02540 tauD; (GenBank) taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D QDY63_13570 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D QDY63_05915 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
C 00440 Phosphonate and phosphinate metabolism [PATH:pbre00440]
D QDY63_06375 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D QDY63_12140 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D QDY63_12145 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D QDY63_28355 TIGR03364 family FAD-dependent oxidoreductase K27877 pbfD; 2-(methylaminoethyl)phosphonate oxidase [EC:1.5.3.27]
D QDY63_28350 HD domain-containing protein K21196 phnZ; 2-amino-1-hydroxyethylphosphonate dioxygenase (glycine-forming) [EC:1.13.11.78]
D QDY63_09300 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D QDY63_09290 phnG; (GenBank) phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D QDY63_09295 phnH; (GenBank) phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D QDY63_09315 phnL; (GenBank) phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D QDY63_09320 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D QDY63_09305 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D QDY63_09330 phnP; (GenBank) phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pbre00450]
D QDY63_16830 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D QDY63_16525 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D QDY63_13280 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D QDY63_11715 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D QDY63_05905 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D QDY63_05900 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D QDY63_18535 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D QDY63_23440 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pbre00460]
D QDY63_07815 bglX; (GenBank) beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D QDY63_18215 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D QDY63_05570 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D QDY63_13755 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D QDY63_00535 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D QDY63_25480 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D QDY63_27585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pbre00470]
D QDY63_00030 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D QDY63_05565 ddlA; (GenBank) D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D QDY63_24360 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D QDY63_15105 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D QDY63_27845 alr; (GenBank) alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D QDY63_10630 asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D QDY63_05805 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D QDY63_24380 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D QDY63_02525 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D QDY63_04960 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D QDY63_18715 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D QDY63_29035 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D QDY63_12835 alanine racemase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D QDY63_29030 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D QDY63_10105 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D QDY63_24120 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D QDY63_18045 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D QDY63_18060 FAD-dependent oxidoreductase K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-]
D QDY63_18050 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D QDY63_18055 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D QDY63_21275 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D QDY63_00040 dadA; (GenBank) D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D QDY63_27990 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:pbre00480]
D QDY63_05570 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D QDY63_13755 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D QDY63_28785 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D QDY63_08470 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D QDY63_22120 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D QDY63_08475 allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D QDY63_08480 biotin-dependent carboxyltransferase family protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D QDY63_02560 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
D QDY63_28100 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D QDY63_23970 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D QDY63_16440 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D QDY63_09815 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_10165 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_13300 yfcF; (GenBank) glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_20265 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_22215 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_28990 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_14565 gorA; (GenBank) glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D QDY63_18340 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D QDY63_18345 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D QDY63_15665 D-glycerate dehydrogenase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43]
D QDY63_16410 gnd; (GenBank) decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D QDY63_16405 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D QDY63_22310 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D QDY63_05930 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D QDY63_08850 redoxin domain-containing protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D QDY63_19560 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D QDY63_25015 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pbre00520]
D QDY63_26865 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D QDY63_20015 mupP; (GenBank) N-acetylmuramic acid 6-phosphate phosphatase MupP K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D QDY63_27010 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D QDY63_27005 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D QDY63_06775 nagE; (GenBank) N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D QDY63_01245 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D QDY63_20740 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D QDY63_24595 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D QDY63_21625 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D QDY63_20620 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D QDY63_06790 nagA; (GenBank) N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D QDY63_05180 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D QDY63_01235 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D QDY63_06785 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D QDY63_15825 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D QDY63_05265 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D QDY63_19040 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D QDY63_24220 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D QDY63_23045 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D QDY63_15625 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D QDY63_14560 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D QDY63_16055 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D QDY63_03725 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D QDY63_19875 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D QDY63_24165 nucleotide sugar dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D QDY63_02700 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_05015 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_19930 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:pbre00541]
D QDY63_01245 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D QDY63_19860 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D QDY63_19870 NAD-dependent epimerase/dehydratase family protein K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D QDY63_24630 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D QDY63_07310 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D QDY63_24635 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D QDY63_21635 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D QDY63_20740 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D QDY63_20745 wecC; (GenBank) UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D QDY63_24440 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D QDY63_01385 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D QDY63_03720 hldE; (GenBank) bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D QDY63_14560 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D QDY63_16055 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D QDY63_16080 arnA; (GenBank) bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D QDY63_16085 arnC; (GenBank) undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D QDY63_16075 arnD; (GenBank) 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D QDY63_28795 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D QDY63_02700 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_05015 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_19930 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_02705 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D QDY63_05005 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D QDY63_05020 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D QDY63_02695 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D QDY63_05010 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D QDY63_26280 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D QDY63_19040 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D QDY63_24220 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:pbre00540]
D QDY63_07275 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D QDY63_24340 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D QDY63_07265 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D QDY63_18525 lpxH; (GenBank) UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D QDY63_07280 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D QDY63_21645 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D QDY63_03755 waaA; (GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D QDY63_01405 lysophospholipid acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D QDY63_20345 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D QDY63_08500 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D QDY63_15365 lpxO; (GenBank) lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D QDY63_16070 arnT; (GenBank) lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D QDY63_05810 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D QDY63_03650 waaC; (GenBank) lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D QDY63_03645 waaF; (GenBank) lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D QDY63_03660 rfaP; (GenBank) lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D QDY63_16420 phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D QDY63_03655 glycosyltransferase family 4 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:pbre00550]
D QDY63_24595 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D QDY63_21625 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D QDY63_24365 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D QDY63_24380 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D QDY63_24395 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D QDY63_05565 ddlA; (GenBank) D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D QDY63_24360 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D QDY63_24390 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D QDY63_07235 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D QDY63_15310 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D QDY63_24385 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D QDY63_24370 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D QDY63_28215 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_03360 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D QDY63_05360 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D QDY63_04475 pbpC; (GenBank) peptidoglycan glycosyltransferase PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D QDY63_24375 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_25910 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_19170 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D QDY63_25915 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D QDY63_24400 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D QDY63_25895 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D QDY63_06170 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D QDY63_21010 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:pbre00552]
D QDY63_15310 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D QDY63_19860 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pbre00543]
D QDY63_24170 alg8; (GenBank) mannuronan synthase K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D QDY63_24175 alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33]
D QDY63_24205 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D QDY63_24210 alginate O-acetyltransferase K19295 algJ; alginate O-acetyltransferase complex protein AlgJ
D QDY63_24215 alginate O-acetyltransferase AlgF K19296 algF; alginate O-acetyltransferase complex protein AlgF
D QDY63_24195 alginate O-acetyltransferase K19293 algX; alginate biosynthesis protein AlgX
D QDY63_19045 glycosyltransferase K25205 pslC; polysaccharide biosynthesis protein PslC
D QDY63_19060 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF
D QDY63_19070 glycosyltransferase family 4 protein K21001 pslH; polysaccharide biosynthesis protein PslH
D QDY63_19075 glycosyltransferase family 1 protein K21002 pslI; polysaccharide biosynthesis protein PslI
D QDY63_02170 pgaC; (GenBank) poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D QDY63_02175 pgaD; (GenBank) poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD
D QDY63_02530 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D QDY63_06565 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D QDY63_21155 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pbre00730]
D QDY63_03765 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D QDY63_25790 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D QDY63_06575 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D QDY63_19230 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D QDY63_03040 thiI; (GenBank) tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D QDY63_25315 thiO; (GenBank) glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D QDY63_26165 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D QDY63_28200 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D QDY63_25795 thiE; (GenBank) thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D QDY63_26195 thiL; (GenBank) thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D QDY63_03880 rsgA; (GenBank) small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D QDY63_07065 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pbre00740]
D QDY63_26185 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D QDY63_26210 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D QDY63_26220 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D QDY63_29050 HAD-IA family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D QDY63_21895 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D QDY63_26205 ribE; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D QDY63_26215 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D QDY63_25365 ribF; (GenBank) bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D QDY63_17125 flavin reductase K23470 C1-hpah; 4-hydroxyphenylacetate 3-hydroxylase, reductase component [EC:1.5.1.36]
D QDY63_28605 ssuE; (GenBank) NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D QDY63_08800 bluB; (GenBank) 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D QDY63_03780 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D QDY63_25990 ubiX; (GenBank) flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pbre00750]
D QDY63_07485 pdxH; (GenBank) pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D QDY63_14235 pdxH; (GenBank) pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D QDY63_00695 pdxY; (GenBank) pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D QDY63_27870 epd; (GenBank) erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D QDY63_20705 pdxB; (GenBank) 4-phosphoerythronate dehydrogenase PdxB K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D QDY63_19990 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D QDY63_21335 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D QDY63_27025 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D QDY63_23930 pdxJ; (GenBank) pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D QDY63_06895 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pbre00760]
D QDY63_08050 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D QDY63_22585 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D QDY63_25115 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D QDY63_04085 pncB; (GenBank) nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D QDY63_19680 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D QDY63_07355 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D QDY63_25930 nadD; (GenBank) nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D QDY63_08730 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D QDY63_15760 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D QDY63_04080 nadE; (GenBank) ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D QDY63_23320 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D QDY63_26420 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D QDY63_16465 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D QDY63_20585 sthA; (GenBank) Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D QDY63_01915 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D QDY63_01920 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D QDY63_01910 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D QDY63_02250 gabD; (GenBank) NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D QDY63_14175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D QDY63_10315 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
C 00770 Pantothenate and CoA biosynthesis [PATH:pbre00770]
D QDY63_05375 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D QDY63_06290 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D QDY63_05380 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D QDY63_05385 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D QDY63_28315 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D QDY63_05275 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D QDY63_19685 putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D QDY63_22735 putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D QDY63_05270 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D QDY63_26820 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D QDY63_00110 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D QDY63_08730 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D QDY63_28285 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D QDY63_25235 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D QDY63_21755 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D QDY63_07755 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D QDY63_12580 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D QDY63_11995 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D QDY63_11990 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D QDY63_12000 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D QDY63_11845 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D QDY63_12010 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D QDY63_13135 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pbre00780]
D QDY63_27410 bioC; (GenBank) malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D QDY63_03450 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D QDY63_09580 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D QDY63_03435 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D QDY63_21545 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D QDY63_03440 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_04595 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_11560 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_13445 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_19145 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_21260 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_21555 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23185 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23865 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23870 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_07270 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D QDY63_27415 alpha/beta fold hydrolase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D QDY63_27420 bioF; (GenBank) 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D QDY63_27970 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D QDY63_27405 bioD; (GenBank) dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D QDY63_27425 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D QDY63_26825 birA; (GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pbre00785]
D QDY63_25885 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D QDY63_25880 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_03635 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_12100 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_14135 mdeB; (GenBank) alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D QDY63_03630 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D QDY63_09490 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D QDY63_09495 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D QDY63_12600 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D QDY63_12595 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D QDY63_12590 dihydrolipoamide acetyltransferase family protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D QDY63_22560 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D QDY63_22570 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D QDY63_28680 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D QDY63_22555 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D QDY63_28675 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pbre00790]
D QDY63_20255 folE; (GenBank) GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D QDY63_00735 folE2; (GenBank) GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D QDY63_25060 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D QDY63_27075 folB; (GenBank) dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D QDY63_05280 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D QDY63_27070 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D QDY63_05175 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D QDY63_28335 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D QDY63_10480 folC; (GenBank) bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D QDY63_26185 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D QDY63_26210 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D QDY63_21215 pabB; (GenBank) aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D QDY63_21540 pabC; (GenBank) aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D QDY63_05970 folX; (GenBank) dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D QDY63_05975 folM; (GenBank) dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D QDY63_18680 queD; (GenBank) 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D QDY63_08945 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D QDY63_08950 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D QDY63_22625 queE; (GenBank) 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D QDY63_22620 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D QDY63_20540 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D QDY63_16765 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D QDY63_21510 radical SAM protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D QDY63_24145 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D QDY63_24135 moaE; (GenBank) molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D QDY63_14240 moaB; (GenBank) molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D QDY63_19460 moaB; (GenBank) molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D QDY63_14245 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D QDY63_19455 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D QDY63_21605 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D QDY63_19465 mobA; (GenBank) molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:pbre00670]
D QDY63_28335 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D QDY63_05975 folM; (GenBank) dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D QDY63_12030 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D QDY63_25480 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D QDY63_27585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D QDY63_08750 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D QDY63_04380 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D QDY63_22570 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D QDY63_28680 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D QDY63_16525 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D QDY63_28390 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D QDY63_14675 thyX; (GenBank) FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D QDY63_22785 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D QDY63_27560 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D QDY63_27940 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D QDY63_28735 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D QDY63_27885 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D QDY63_27935 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D QDY63_22560 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_22555 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D QDY63_28675 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D QDY63_27770 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D QDY63_09740 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D QDY63_27765 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D QDY63_12855 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pbre00860]
D QDY63_10350 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D QDY63_05785 hemA; (GenBank) glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D QDY63_25800 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D QDY63_12380 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D QDY63_28875 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D QDY63_28970 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D QDY63_28965 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D QDY63_03415 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D QDY63_01480 hemF; (GenBank) oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D QDY63_13390 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D QDY63_13395 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D QDY63_20875 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D QDY63_26880 hemJ; (GenBank) protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D QDY63_05875 hemH; (GenBank) ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D QDY63_28960 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D QDY63_18280 cysG; (GenBank) siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D QDY63_16970 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D QDY63_21085 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D QDY63_16945 Lrp/AsnC family transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D QDY63_16950 Lrp/AsnC family transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D QDY63_16955 AsnC family transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D QDY63_16960 Lrp/AsnC family transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D QDY63_16975 cytochrome D1 domain-containing protein K24867 nirN; dihydro-heme d1 dehydrogenase
D QDY63_01690 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D QDY63_06240 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D QDY63_01685 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D QDY63_04345 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D QDY63_04335 cobG; (GenBank) precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D QDY63_04350 cobJ; (GenBank) precorrin-3B C(17)-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D QDY63_16510 cobM; (GenBank) precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D QDY63_16505 cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D QDY63_18845 cobF; (GenBank) precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D QDY63_04325 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D QDY63_04330 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D QDY63_04340 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D QDY63_08795 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D QDY63_16485 cobN; (GenBank) cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D QDY63_22745 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D QDY63_08790 cobO; (GenBank) cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D QDY63_08815 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D QDY63_08805 cbiB; (GenBank) adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D QDY63_08810 cobD; (GenBank) threonine-phosphate decarboxylase CobD K02225 cobC1; cobalamin biosynthesis protein CobC
D QDY63_08820 cobU; (GenBank) bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D QDY63_08835 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D QDY63_08825 cobT; (GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D QDY63_08830 cobC; (GenBank) alpha-ribazole phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D QDY63_16480 AAA family ATPase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D QDY63_23075 biliverdin-producing heme oxygenase K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D QDY63_23180 HugZ family protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D QDY63_23515 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D QDY63_26585 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pbre00130]
D QDY63_22660 ybgC; (GenBank) tol-pal system-associated acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D QDY63_00405 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D QDY63_00410 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D QDY63_28800 ubiD; (GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D QDY63_25990 ubiX; (GenBank) flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D QDY63_28695 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D QDY63_14250 U32 family peptidase K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]
D QDY63_14255 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]
D QDY63_14260 SCP2 sterol-binding domain-containing protein K24843 ubiT; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT
D QDY63_20010 ubiG; (GenBank) bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D QDY63_28705 ubiH; (GenBank) 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D QDY63_03275 ubiE; (GenBank) bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D QDY63_26905 coq7; (GenBank) 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 coq7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D QDY63_09625 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D QDY63_21700 wrbA; (GenBank) NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D QDY63_14960 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pbre00900]
D QDY63_26165 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D QDY63_07245 ispC; (GenBank) 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D QDY63_07325 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D QDY63_05770 ispE; (GenBank) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D QDY63_07345 ispF; (GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D QDY63_06630 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D QDY63_25345 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12895 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D QDY63_25990 ubiX; (GenBank) flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D QDY63_26160 ispA; (GenBank) (2E,6E)-farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D QDY63_25405 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D QDY63_07235 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D QDY63_08265 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:pbre00907]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D QDY63_20670 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D QDY63_21380 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D QDY63_19390 SDR family oxidoreductase K13774 atuB; citronellol/citronellal dehydrogenase
D QDY63_20195 long-chain-acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-]
D QDY63_19400 atuD; (GenBank) citronellyl-CoA dehydrogenase K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D QDY63_19410 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D QDY63_19395 atuC; (GenBank) geranyl-CoA carboxylase subunit beta K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D QDY63_19405 enoyl-CoA hydratase-related protein K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57]
D QDY63_12260 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D QDY63_12900 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D QDY63_08265 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20120 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20665 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D QDY63_13205 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D QDY63_13210 transketolase C-terminal domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D QDY63_27875 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pbre00523]
D QDY63_02700 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_05015 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_19930 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_02705 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D QDY63_05005 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D QDY63_05020 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D QDY63_02695 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D QDY63_05010 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D QDY63_26280 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D QDY63_21755 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
C 01055 Biosynthesis of vancomycin group antibiotics
D QDY63_02705 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D QDY63_05005 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pbre00946]
D QDY63_07815 bglX; (GenBank) beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D QDY63_28500 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:pbre00332]
D QDY63_25385 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D QDY63_25935 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pbre00261]
D QDY63_19305 MbtH family protein K05375 mbtH; MbtH protein
D QDY63_05905 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D QDY63_05900 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D QDY63_21880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D QDY63_10445 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D QDY63_07860 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D QDY63_08095 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D QDY63_05135 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D QDY63_04235 GNAT family N-acetyltransferase K19113 ttr; acetyltransferase [EC:2.3.1.-]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pbre00521]
D QDY63_23045 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D QDY63_15625 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D QDY63_06555 suhB; (GenBank) inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D QDY63_12710 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D QDY63_02700 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_05015 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_19930 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_02705 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D QDY63_05005 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D QDY63_05020 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D QDY63_02695 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D QDY63_05010 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D QDY63_26280 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D QDY63_23045 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pbre00525]
D QDY63_02700 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_05015 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_19930 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D QDY63_02705 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D QDY63_05005 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pbre00401]
D QDY63_19975 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D QDY63_08940 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D QDY63_12850 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_19980 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_24580 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_10330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D QDY63_26945 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D QDY63_26935 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D QDY63_21560 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D QDY63_03440 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_04595 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_11560 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_13445 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_19145 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_21260 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_21555 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23185 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23865 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23870 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00975 Biosynthesis of various siderophores [PATH:pbre00975]
D QDY63_19370 GNAT family N-acetyltransferase K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
D QDY63_19310 aspartate aminotransferase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
C 00998 Biosynthesis of various antibiotics
D QDY63_02885 acyl carrier protein K02078 acpP; acyl carrier protein
D QDY63_03520 acyl carrier protein K02078 acpP; acyl carrier protein
D QDY63_03525 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D QDY63_21550 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D QDY63_25685 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pbre00999]
D QDY63_27885 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D QDY63_01485 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D QDY63_18575 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D QDY63_07815 bglX; (GenBank) beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pbre00362]
D QDY63_15505 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D QDY63_15510 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D QDY63_15515 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D QDY63_15520 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D QDY63_04840 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D QDY63_04830 muconate cycloisomerase family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D QDY63_04835 catC; (GenBank) muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D QDY63_07685 pcaD; (GenBank) 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D QDY63_08575 alpha/beta hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D QDY63_08265 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20120 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20665 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_07660 pcaF; (GenBank) 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D QDY63_09725 amidohydrolase family protein K20941 graF; gamma-resorcylate decarboxylase [EC:4.1.1.103]
D QDY63_07670 pcaG; (GenBank) protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D QDY63_07665 pcaH; (GenBank) protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D QDY63_07680 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D QDY63_07690 pcaC; (GenBank) 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D QDY63_18720 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D QDY63_24780 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D QDY63_06600 fdx; (GenBank) ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D QDY63_08350 pobA; (GenBank) 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D QDY63_22660 ybgC; (GenBank) tol-pal system-associated acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D QDY63_08220 acyl-CoA dehydrogenase family protein K04118 pimC; pimeloyl-CoA dehydrogenase large subunit [EC:1.3.1.62]
D QDY63_08225 acyl-CoA dehydrogenase K28556 pimD; pimeloyl-CoA dehydrogenase small subunit [EC:1.3.1.62]
D QDY63_21380 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D QDY63_20670 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D QDY63_08215 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D QDY63_01930 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D QDY63_08255 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pbre00627]
D QDY63_07795 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_11530 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_11905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_18215 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D QDY63_25990 ubiX; (GenBank) flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D QDY63_04815 antA; (GenBank) anthranilate 1,2-dioxygenase large subunit K05599 antA; anthranilate 1,2-dioxygenase (deaminating, decarboxylating) large subunit [EC:1.14.12.1]
D QDY63_04810 antB; (GenBank) anthranilate 1,2-dioxygenase small subunit K05600 antB; anthranilate 1,2-dioxygenase (deaminating, decarboxylating) small subunit [EC:1.14.12.1]
D QDY63_04805 antC; (GenBank) anthranilate 1,2-dioxygenase electron transfer component AntC K11311 antC; anthranilate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:pbre00364]
D QDY63_15505 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D QDY63_15510 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D QDY63_15515 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D QDY63_15520 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D QDY63_04840 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D QDY63_04830 muconate cycloisomerase family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00625 Chloroalkane and chloroalkene degradation [PATH:pbre00625]
D QDY63_07880 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D QDY63_07335 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D QDY63_15590 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_19140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D QDY63_27555 fdhA; (GenBank) formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D QDY63_18820 exaA; (GenBank) quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pbre00361]
D QDY63_04840 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D QDY63_04830 muconate cycloisomerase family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00623 Toluene degradation [PATH:pbre00623]
D QDY63_04840 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D QDY63_04830 muconate cycloisomerase family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00622 Xylene degradation [PATH:pbre00622]
D QDY63_15505 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D QDY63_15510 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D QDY63_15515 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D QDY63_15520 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
C 00633 Nitrotoluene degradation [PATH:pbre00633]
D QDY63_17110 oxygen-insensitive NAD(P)H-dependent nitroreductase NfsB K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D QDY63_06710 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D QDY63_09760 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D QDY63_10215 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D QDY63_13860 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D QDY63_08265 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20120 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20665 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:pbre00643]
D QDY63_11500 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D QDY63_11615 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D QDY63_06040 hmgA; (GenBank) homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D QDY63_06050 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D QDY63_06045 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D QDY63_07795 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_11530 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_11905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D QDY63_18215 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D QDY63_07650 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D QDY63_07655 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
D QDY63_04225 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D QDY63_04230 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D QDY63_04245 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:pbre00930]
D QDY63_19025 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D QDY63_13420 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D QDY63_21300 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D QDY63_10030 acyl-CoA dehydrogenase family protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D QDY63_15275 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D QDY63_20670 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D QDY63_21380 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pbre00626]
D QDY63_07880 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D QDY63_07335 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D QDY63_07670 pcaG; (GenBank) protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D QDY63_07665 pcaH; (GenBank) protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:pbre00984]
D QDY63_21730 CaiB/BaiF CoA-transferase family protein K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D QDY63_08265 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20120 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D QDY63_20665 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pbre03020]
D QDY63_26760 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D QDY63_26755 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D QDY63_26600 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D QDY63_00165 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D QDY63_16245 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pbre03010]
D QDY63_01940 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_04705 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_05405 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_06420 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_19195 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_26850 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_01955 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_04720 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_05420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_06435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_19180 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_26835 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_01960 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_01965 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_04725 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_05425 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_06440 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_19175 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_26830 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_19965 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D QDY63_07215 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D QDY63_26695 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D QDY63_26605 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D QDY63_26640 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D QDY63_03990 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D QDY63_26745 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D QDY63_26655 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D QDY63_24865 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D QDY63_26730 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D QDY63_26610 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D QDY63_26750 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D QDY63_26615 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D QDY63_26660 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D QDY63_05230 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D QDY63_06855 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D QDY63_26680 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D QDY63_03995 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D QDY63_26705 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D QDY63_25375 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D QDY63_27090 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D QDY63_26775 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D QDY63_26710 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D QDY63_26725 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D QDY63_26720 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D QDY63_26665 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D QDY63_26650 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D QDY63_04005 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D QDY63_26770 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D QDY63_26780 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D QDY63_26765 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D QDY63_24870 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D QDY63_26675 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D QDY63_26630 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D QDY63_26690 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D QDY63_26595 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D QDY63_26645 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D QDY63_06870 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D QDY63_10710 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D QDY63_25400 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D QDY63_26700 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D QDY63_26715 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D QDY63_26670 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D QDY63_05755 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D QDY63_25395 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D QDY63_00095 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D QDY63_26685 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D QDY63_26635 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D QDY63_03345 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D QDY63_23705 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D QDY63_21570 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D QDY63_00090 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D QDY63_01335 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D QDY63_10705 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D QDY63_06160 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D QDY63_26620 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pbre00970]
D QDY63_01950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_04715 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_05415 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_06430 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_10355 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_10365 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_19185 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_26840 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_02245 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D QDY63_12035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D QDY63_21835 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D QDY63_21860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D QDY63_21865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D QDY63_10050 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D QDY63_25285 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D QDY63_09870 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D QDY63_09880 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D QDY63_10515 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D QDY63_10520 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D QDY63_13760 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D QDY63_05765 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D QDY63_09685 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D QDY63_09695 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D QDY63_10360 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D QDY63_10370 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D QDY63_07955 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D QDY63_09690 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D QDY63_09700 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D QDY63_17495 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D QDY63_26805 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D QDY63_12040 tRNA-His K14226 tRNA-His; tRNA His
D QDY63_12050 tRNA-His K14226 tRNA-His; tRNA His
D QDY63_01945 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_04710 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_05410 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_06425 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_19190 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_26845 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_03970 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_03975 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_05195 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_06520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_12045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_13990 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_22615 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D QDY63_25275 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D QDY63_05200 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_05610 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_10940 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_23220 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_23225 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_27110 tRNA-Ile K14230 tRNA-Met; tRNA Met
D QDY63_02925 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D QDY63_10735 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D QDY63_25270 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D QDY63_25280 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D QDY63_08115 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D QDY63_18235 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D QDY63_21355 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D QDY63_21870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D QDY63_02795 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D QDY63_25210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D QDY63_26800 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D QDY63_26795 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D QDY63_26810 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D QDY63_09865 tRNA-Val K14237 tRNA-Val; tRNA Val
D QDY63_09875 tRNA-Val K14237 tRNA-Val; tRNA Val
D QDY63_10510 tRNA-Val K14237 tRNA-Val; tRNA Val
D QDY63_10530 tRNA-Val K14237 tRNA-Val; tRNA Val
D QDY63_10350 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D QDY63_11840 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D QDY63_13140 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D QDY63_17170 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D QDY63_24760 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D QDY63_24765 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D QDY63_24755 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D QDY63_18515 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D QDY63_21885 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D QDY63_22685 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D QDY63_01395 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D QDY63_01390 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D QDY63_10695 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D QDY63_18285 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D QDY63_18510 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D QDY63_23440 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D QDY63_01425 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D QDY63_23985 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D QDY63_25850 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D QDY63_25360 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D QDY63_07010 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D QDY63_03335 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D QDY63_23205 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D QDY63_06635 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D QDY63_10715 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D QDY63_10720 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D QDY63_26855 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D QDY63_24895 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:pbre03008]
D QDY63_23945 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D QDY63_03885 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D QDY63_04605 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pbre03060]
D QDY63_26625 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D QDY63_26790 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D QDY63_05190 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D QDY63_06540 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D QDY63_06545 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D QDY63_06535 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D QDY63_01320 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D QDY63_22760 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D QDY63_03010 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D QDY63_06850 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D QDY63_20945 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
D QDY63_28235 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D QDY63_03250 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D QDY63_17275 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D QDY63_03245 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D QDY63_17280 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D QDY63_03240 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D QDY63_17285 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D QDY63_23950 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D QDY63_13255 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D QDY63_13965 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D QDY63_23755 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D QDY63_25355 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
D QDY63_09540 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pbre04122]
D QDY63_06575 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D QDY63_19230 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D QDY63_03855 rhdA; (GenBank) thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D QDY63_28260 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D QDY63_08080 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D QDY63_20715 tusA; (GenBank) sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D QDY63_18255 tusB; (GenBank) sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D QDY63_18250 tusC; (GenBank) sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D QDY63_18245 tusD; (GenBank) sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D QDY63_18260 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D QDY63_18360 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D QDY63_24135 moaE; (GenBank) molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D QDY63_16765 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D QDY63_21510 radical SAM protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D QDY63_24140 moaD; (GenBank) molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D QDY63_05800 molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D QDY63_21145 moeB; (GenBank) molybdopterin-synthase adenylyltransferase MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D QDY63_24145 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D QDY63_14240 moaB; (GenBank) molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D QDY63_19460 moaB; (GenBank) molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D QDY63_03040 thiI; (GenBank) tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D QDY63_28205 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:pbre03018]
D QDY63_28410 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D QDY63_21600 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D QDY63_24115 rhlB; (GenBank) ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D QDY63_07315 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D QDY63_05235 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D QDY63_25670 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D QDY63_27950 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D QDY63_03980 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D QDY63_19590 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D QDY63_02630 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D QDY63_08900 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D QDY63_28805 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D QDY63_05125 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D QDY63_23165 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D QDY63_03925 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D QDY63_28870 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D QDY63_05285 polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pbre03030]
D QDY63_16590 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_25695 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_27475 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_07290 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D QDY63_20915 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D QDY63_21525 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D QDY63_25860 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D QDY63_23975 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D QDY63_01345 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D QDY63_04010 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D QDY63_27095 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D QDY63_26570 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D QDY63_16600 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D QDY63_07285 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D QDY63_01755 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D QDY63_20955 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D QDY63_27895 ligB; (GenBank) NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pbre03410]
D QDY63_23470 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D QDY63_07990 ung; (GenBank) uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D QDY63_02935 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D QDY63_25940 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D QDY63_28295 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D QDY63_01400 tag; (GenBank) DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D QDY63_13600 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D QDY63_10065 mug; (GenBank) G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D QDY63_00140 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D QDY63_12285 xthA; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D QDY63_01755 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D QDY63_06935 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D QDY63_20955 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D QDY63_27895 ligB; (GenBank) NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pbre03420]
D QDY63_20605 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D QDY63_26580 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D QDY63_10335 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D QDY63_17505 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D QDY63_00640 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D QDY63_17950 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D QDY63_01755 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D QDY63_20955 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D QDY63_27895 ligB; (GenBank) NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D QDY63_16245 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:pbre03430]
D QDY63_23425 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D QDY63_03915 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D QDY63_00640 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D QDY63_17950 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D QDY63_22795 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D QDY63_06680 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D QDY63_26155 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D QDY63_06935 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D QDY63_26570 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D QDY63_07290 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D QDY63_01345 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D QDY63_20915 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D QDY63_25860 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D QDY63_21525 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D QDY63_16590 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_25695 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_27475 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_23975 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D QDY63_20955 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D QDY63_27895 ligB; (GenBank) NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D QDY63_26110 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pbre03440]
D QDY63_06935 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D QDY63_26570 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D QDY63_01350 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D QDY63_23935 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D QDY63_20900 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D QDY63_23315 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D QDY63_01755 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D QDY63_22670 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D QDY63_22665 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D QDY63_22675 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D QDY63_00215 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D QDY63_04735 recB; (GenBank) exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D QDY63_04730 recC; (GenBank) exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D QDY63_04740 recD; (GenBank) exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D QDY63_26540 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D QDY63_07290 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D QDY63_01345 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D QDY63_20915 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D QDY63_25860 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D QDY63_21525 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D QDY63_16590 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_25695 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_27475 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_23975 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D QDY63_03340 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pbre03250]
D QDY63_08570 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pbre02010]
D QDY63_09355 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D QDY63_02285 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D QDY63_02290 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D QDY63_02295 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D QDY63_02300 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D QDY63_02555 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D QDY63_28620 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D QDY63_02545 tauC; (GenBank) taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D QDY63_02550 tauB; (GenBank) taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D QDY63_02040 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D QDY63_02345 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D QDY63_28600 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D QDY63_02050 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D QDY63_02340 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D QDY63_28590 ssuC; (GenBank) aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D QDY63_02045 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D QDY63_02335 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D QDY63_28585 ssuB; (GenBank) aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D QDY63_14500 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D QDY63_14495 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D QDY63_14490 modC; (GenBank) molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D QDY63_03965 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D QDY63_28360 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D QDY63_28690 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D QDY63_03960 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D QDY63_28365 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D QDY63_28685 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D QDY63_23535 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D QDY63_28370 putative 2-aminoethylphosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D QDY63_00550 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_10085 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_15660 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_18770 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_28540 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_28550 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_28525 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D QDY63_28530 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D QDY63_28535 potA; (GenBank) polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D QDY63_01495 choX; (GenBank) choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_03135 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_09450 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_12765 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_17100 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_27705 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_27740 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_03140 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D QDY63_27745 choW; (GenBank) choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D QDY63_03145 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D QDY63_27750 choV; (GenBank) choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D QDY63_25000 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D QDY63_24995 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D QDY63_25005 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D QDY63_25010 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D QDY63_15840 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D QDY63_22335 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D QDY63_15855 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D QDY63_15850 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D QDY63_15845 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D QDY63_24610 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D QDY63_01835 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D QDY63_24615 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D QDY63_01845 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D QDY63_24620 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D QDY63_24605 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D QDY63_01840 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D QDY63_24625 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D QDY63_21995 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D QDY63_22350 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D QDY63_22345 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D QDY63_22340 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D QDY63_10635 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_11760 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_13195 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_21305 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_10645 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D QDY63_11770 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D QDY63_13200 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D QDY63_21310 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D QDY63_10640 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D QDY63_11765 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D QDY63_13190 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D QDY63_21315 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D QDY63_10660 rbsD; (GenBank) D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D QDY63_17665 substrate-binding domain-containing protein K17205 xltC; putative xylitol transport system substrate-binding protein
D QDY63_17660 ABC transporter permease K17206 xltB; putative xylitol transport system permease protein
D QDY63_17655 sugar ABC transporter ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein
D QDY63_12720 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D QDY63_12730 ABC transporter permease K17214 K17214; inositol transport system permease protein
D QDY63_12725 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D QDY63_18470 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D QDY63_18485 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D QDY63_18480 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D QDY63_18495 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D QDY63_18490 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D QDY63_00480 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D QDY63_12280 phosphate ABC transporter substrate-binding/OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein
D QDY63_00475 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D QDY63_00470 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D QDY63_00465 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D QDY63_09275 phnD; (GenBank) phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D QDY63_09280 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D QDY63_09270 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D QDY63_24300 transporter substrate-binding domain-containing protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D QDY63_07400 ABC transporter permease K10015 hisM; histidine transport system permease protein
D QDY63_12550 ABC transporter permease K10015 hisM; histidine transport system permease protein
D QDY63_07405 ABC transporter permease K10016 hisQ; histidine transport system permease protein
D QDY63_12555 ABC transporter permease K10016 hisQ; histidine transport system permease protein
D QDY63_07390 ATP-binding cassette domain-containing protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_12545 ATP-binding cassette domain-containing protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_07410 transporter substrate-binding domain-containing protein K10014 hisJ; histidine transport system substrate-binding protein
D QDY63_12560 ABC transporter substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D QDY63_23570 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D QDY63_23580 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein
D QDY63_23575 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D QDY63_23585 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_06320 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D QDY63_24105 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D QDY63_24100 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D QDY63_24095 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D QDY63_24090 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_02520 tcyJ; (GenBank) cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D QDY63_28470 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D QDY63_02515 tcyL; (GenBank) cystine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D QDY63_02510 yecC; (GenBank) L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_21970 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D QDY63_21960 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D QDY63_21965 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein
D QDY63_21950 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_02820 ABC transporter substrate-binding protein K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein
D QDY63_02815 ABC transporter permease K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D QDY63_02810 ABC transporter permease K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D QDY63_02825 ABC transporter ATP-binding protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_06280 ATP-binding cassette domain-containing protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_04105 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_07575 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_11525 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_11870 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_13125 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_04110 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_07565 livH; (GenBank) high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_11520 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_11865 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_13105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_04115 livM; (GenBank) high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_07560 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_11515 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_11860 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_13110 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_04120 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_07555 livG; (GenBank) high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_11855 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_13115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_04125 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_07550 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_11510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_11850 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_13120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_01700 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D QDY63_02420 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D QDY63_02485 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D QDY63_01705 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D QDY63_02475 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D QDY63_01710 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D QDY63_02480 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D QDY63_04275 urtA; (GenBank) urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D QDY63_04270 urtB; (GenBank) urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D QDY63_04265 urtC; (GenBank) urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D QDY63_04260 urtD; (GenBank) urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D QDY63_04255 urtE; (GenBank) urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D QDY63_00100 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_24935 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_24940 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_24950 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_24955 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D QDY63_24960 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D QDY63_24965 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D QDY63_24970 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D QDY63_16620 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D QDY63_16625 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D QDY63_17540 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D QDY63_16630 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D QDY63_17545 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D QDY63_16635 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D QDY63_17550 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D QDY63_16640 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D QDY63_17555 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D QDY63_26175 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D QDY63_01740 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D QDY63_19285 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D QDY63_01725 znuB; (GenBank) zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D QDY63_19295 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D QDY63_01730 znuC; (GenBank) zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D QDY63_19290 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D QDY63_05025 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D QDY63_05030 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D QDY63_20560 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D QDY63_20570 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D QDY63_20565 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D QDY63_09235 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D QDY63_09230 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D QDY63_09225 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D QDY63_09220 ccmA; (GenBank) cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D QDY63_23965 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D QDY63_23960 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D QDY63_24650 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D QDY63_13740 ABC transporter permease subunit K19341 nosY; Cu-processing system permease protein
D QDY63_13735 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D QDY63_28225 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D QDY63_28230 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D QDY63_17315 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D QDY63_17320 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D QDY63_03715 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D QDY63_08565 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D QDY63_02025 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D QDY63_08700 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D QDY63_16285 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D QDY63_18905 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D QDY63_18970 cyclic peptide export ABC transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:pbre02060]
D QDY63_06775 nagE; (GenBank) N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D QDY63_06730 treP; (GenBank) PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D QDY63_16990 EAL domain-containing protein K02761 celB; cellobiose PTS system EIIC component
D QDY63_06745 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D QDY63_06780 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D QDY63_25075 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D QDY63_25065 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D QDY63_25070 pfkB; (GenBank) 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D QDY63_28405 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D QDY63_24675 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D QDY63_24665 ptsN; (GenBank) PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pbre03070]
D QDY63_03760 TolC family outer membrane protein K12340 tolC; outer membrane protein
D QDY63_17075 TolC family protein K12340 tolC; outer membrane protein
D QDY63_05655 YscO family type III secretion system apparatus protein K04056 yscO; type III secretion protein O
D QDY63_05700 sctC; (GenBank) type III secretion system outer membrane ring subunit SctC K03219 yscC; type III secretion protein C
D QDY63_05635 sctW; (GenBank) type III secretion system gatekeeper subunit SctW K04058 yscW; type III secretion protein W
D QDY63_05725 sctJ; (GenBank) type III secretion inner membrane ring lipoprotein SctJ K03222 yscJ; type III secretion protein J
D QDY63_05670 sctR; (GenBank) type III secretion system export apparatus subunit SctR K03226 yscR; type III secretion protein R
D QDY63_05675 sctS; (GenBank) type III secretion system export apparatus subunit SctS K03227 yscS; type III secretion protein S
D QDY63_05680 sctT; (GenBank) type III secretion system export apparatus subunit SctT K03228 yscT; type III secretion protein T
D QDY63_05685 sctU; (GenBank) type III secretion system export apparatus subunit SctU K03229 yscU; type III secretion protein U
D QDY63_05640 sctV; (GenBank) type III secretion system export apparatus subunit SctV K03230 yscV; type III secretion protein V
D QDY63_05650 FliI/YscN family ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D QDY63_05665 FliM/FliN family flagellar motor switch protein K03225 yscQ; type III secretion protein Q
D QDY63_05715 sctL; (GenBank) type III secretion system stator protein SctL K03223 yscL; type III secretion protein L
D QDY63_12985 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D QDY63_17250 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D QDY63_12955 type II secretion system protein N K02452 gspC; general secretion pathway protein C
D QDY63_17255 pilus assembly protein PilZ K02452 gspC; general secretion pathway protein C
D QDY63_12995 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D QDY63_17240 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D QDY63_12965 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D QDY63_17235 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D QDY63_12950 gspH; (GenBank) type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D QDY63_17230 gspH; (GenBank) type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D QDY63_12960 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D QDY63_17225 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I
D QDY63_12945 type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J
D QDY63_17220 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D QDY63_12970 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D QDY63_17270 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D QDY63_12975 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D QDY63_17215 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D QDY63_12980 gspM; (GenBank) type II secretion system protein GspM K02462 gspM; general secretion pathway protein M
D QDY63_12990 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D QDY63_17245 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D QDY63_28650 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D QDY63_06540 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D QDY63_06545 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D QDY63_26790 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D QDY63_05190 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D QDY63_26625 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D QDY63_06535 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D QDY63_01320 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D QDY63_22760 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D QDY63_28235 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D QDY63_03010 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D QDY63_06850 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D QDY63_03250 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D QDY63_17275 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D QDY63_03245 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D QDY63_17280 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D QDY63_03240 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D QDY63_17285 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D QDY63_00360 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D QDY63_00310 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D QDY63_04035 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D QDY63_00280 tssJ; (GenBank) type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D QDY63_00265 tssM; (GenBank) type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D QDY63_00270 DotU family type VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D QDY63_00355 tssH; (GenBank) type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D QDY63_00250 serine/threonine-protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D QDY63_00285 tagH; (GenBank) type VI secretion system-associated FHA domain protein TagH K11913 fha1; type VI secretion system protein
D QDY63_00255 protein phosphatase 2C domain-containing protein K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pbre02020]
D QDY63_00425 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D QDY63_00420 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D QDY63_25060 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D QDY63_00480 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D QDY63_12280 phosphate ABC transporter substrate-binding/OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein
D QDY63_21745 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D QDY63_21750 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D QDY63_21140 EamA family transporter K07790 pagO; putative membrane protein PagO
D QDY63_02580 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D QDY63_02575 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D QDY63_22495 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D QDY63_21760 ATP-binding protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D QDY63_21765 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D QDY63_08070 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D QDY63_27520 creC; (GenBank) two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D QDY63_27525 creB; (GenBank) two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D QDY63_15880 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D QDY63_15885 MdtB/MuxB family multidrug efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D QDY63_15890 efflux RND transporter permease subunit K07789 mdtC; multidrug efflux pump
D QDY63_00900 copS; (GenBank) copper resistance membrane spanning protein CopS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_05520 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_20555 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_24325 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_00905 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_05500 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_05525 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_20550 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_24320 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_00880 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system
D QDY63_18160 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system
D QDY63_00875 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D QDY63_18155 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D QDY63_00870 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D QDY63_18150 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D QDY63_19320 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D QDY63_19325 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D QDY63_09000 flagellin K02406 fliC; flagellin
D QDY63_09155 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D QDY63_03865 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D QDY63_09180 flagellar motor protein K02556 motA; chemotaxis protein MotA
D QDY63_09890 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D QDY63_19815 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D QDY63_09885 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D QDY63_19810 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D QDY63_09905 kdpA; (GenBank) potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D QDY63_19830 kdpA; (GenBank) potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D QDY63_09895 kdpB; (GenBank) potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D QDY63_19825 kdpB; (GenBank) potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D QDY63_09900 kdpC; (GenBank) K(+)-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D QDY63_19820 kdpC; (GenBank) potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D QDY63_19835 kdpF; (GenBank) K(+)-transporting ATPase subunit F K01545 kdpF; potassium-transporting ATPase KdpF subunit
D QDY63_08025 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D QDY63_08020 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D QDY63_08000 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D QDY63_12910 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D QDY63_08005 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D QDY63_08010 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D QDY63_01685 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D QDY63_01340 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D QDY63_23230 mprF; (GenBank) bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D QDY63_13665 ATP-binding protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D QDY63_13660 winged helix-turn-helix domain-containing protein K18073 parR; two-component system, OmpR family, response regulator ParR
D QDY63_22720 OprD family porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D QDY63_11590 histidine kinase sensor domain-containing protein K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D QDY63_12880 sensor histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D QDY63_11585 response regulator transcription factor K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D QDY63_12885 response regulator transcription factor K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D QDY63_11595 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D QDY63_24975 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D QDY63_28975 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D QDY63_24165 nucleotide sugar dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D QDY63_16805 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D QDY63_16810 narL; (GenBank) two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D QDY63_16790 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D QDY63_16785 narH; (GenBank) nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D QDY63_16775 narI; (GenBank) respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D QDY63_16780 narJ; (GenBank) nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D QDY63_12325 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D QDY63_12335 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D QDY63_06910 response regulator transcription factor K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D QDY63_12320 response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D QDY63_24020 response regulator transcription factor K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D QDY63_21670 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D QDY63_17510 uvrY; (GenBank) UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D QDY63_18830 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D QDY63_10610 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D QDY63_20160 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D QDY63_21875 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D QDY63_06900 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_16150 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_18880 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_19535 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_16155 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D QDY63_18885 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D QDY63_19530 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D QDY63_23480 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D QDY63_14265 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D QDY63_04505 PAS domain-containing protein K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D QDY63_04520 response regulator transcription factor K27077 pprB; two-component system, NarL family, response regulator PprB
D QDY63_12305 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_14935 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_16110 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_18075 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_04565 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D QDY63_04575 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D QDY63_04560 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D QDY63_04555 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D QDY63_04550 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE
D QDY63_04545 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D QDY63_04540 type II secretion system F family protein K12510 tadB; tight adherence protein B
D QDY63_04535 type II secretion system F family protein K12511 tadC; tight adherence protein C
D QDY63_04530 tetratricopeptide repeat protein K27079 tadD; tight adherence protein D
D QDY63_04500 pilus assembly protein TadG-related protein K27080 tadG; tight adherence protein G
D QDY63_07205 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D QDY63_03030 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D QDY63_03025 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D QDY63_03035 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_08380 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_12465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_18775 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28560 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_05290 sigma-54 dependent transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D QDY63_05485 TIGR00366 family protein K02106 atoE; short-chain fatty acids transporter
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_02690 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D QDY63_22995 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D QDY63_02685 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D QDY63_23000 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D QDY63_13595 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D QDY63_21735 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D QDY63_24655 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D QDY63_25220 pilin K02650 pilA; type IV pilus assembly protein PilA
D QDY63_01795 KinB sensor domain-containing domain K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D QDY63_01800 algB; (GenBank) sigma-54-dependent response regulator transcription factor AlgB K11384 algB; two-component system, NtrC family, response regulator AlgB
D QDY63_15215 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D QDY63_21800 cheR; (GenBank) protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D QDY63_01160 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_01970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_03225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_03230 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_03570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_04420 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_04915 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_05545 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_09570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_09670 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_12740 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_15305 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_15485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_16315 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_16740 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_18605 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_18615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_22055 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_22235 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_22775 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_23085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_25095 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_26510 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_29095 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_20790 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D QDY63_20930 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D QDY63_24295 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D QDY63_09195 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D QDY63_09200 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D QDY63_09170 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D QDY63_09160 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D QDY63_09175 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D QDY63_15220 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D QDY63_19430 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_21805 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_24280 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_28080 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D QDY63_28085 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D QDY63_28075 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D QDY63_28095 pilG; (GenBank) twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D QDY63_28090 pilH; (GenBank) twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D QDY63_28070 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D QDY63_06980 CheR family methyltransferase K13486 wspC; chemotaxis protein methyltransferase WspC
D QDY63_06970 methyl-accepting chemotaxis protein K13487 wspA; methyl-accepting chemotaxis protein WspA
D QDY63_06975 chemotaxis protein CheW K13488 wspB; chemotaxis-related protein WspB
D QDY63_06985 chemotaxis protein CheW K13489 wspD; chemotaxis-related protein WspD
D QDY63_06990 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D QDY63_06995 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D QDY63_07000 diguanylate cyclase K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D QDY63_15230 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D QDY63_13705 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D QDY63_13710 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D QDY63_13715 dctM; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein
D QDY63_09025 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D QDY63_09030 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D QDY63_09035 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D QDY63_23590 sensor histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D QDY63_23595 sigma-54 dependent transcriptional regulator K17061 aauR; two-component system, response regulator AauR
D QDY63_23585 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_23580 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein
D QDY63_23575 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D QDY63_23570 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D QDY63_10630 asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
D QDY63_02320 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D QDY63_26915 crp; (GenBank) cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D QDY63_24915 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D QDY63_24910 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D QDY63_24860 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D QDY63_24855 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D QDY63_24850 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D QDY63_06370 cytochrome c family protein K08738 CYC; cytochrome c
D QDY63_08360 cache domain-containing protein K08738 CYC; cytochrome c
D QDY63_16930 c-type cytochrome K08738 CYC; cytochrome c
D QDY63_15120 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D QDY63_20800 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D QDY63_20820 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D QDY63_20805 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D QDY63_20825 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D QDY63_20810 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D QDY63_20830 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D QDY63_20815 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D QDY63_20835 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D QDY63_25550 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D QDY63_25545 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D QDY63_03760 TolC family outer membrane protein K12340 tolC; outer membrane protein
D QDY63_17075 TolC family protein K12340 tolC; outer membrane protein
D QDY63_21630 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D QDY63_20740 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D QDY63_20745 wecC; (GenBank) UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D QDY63_02080 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_06130 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_14310 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_14360 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_16645 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_16690 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_16850 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_17980 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_19105 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_27480 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_00655 FecR domain-containing protein K07165 fecR; transmembrane sensor
D QDY63_02085 FecR domain-containing protein K07165 fecR; transmembrane sensor
D QDY63_06125 FecR family protein K07165 fecR; transmembrane sensor
D QDY63_06155 FecR family protein K07165 fecR; transmembrane sensor
D QDY63_07850 FecR domain-containing protein K07165 fecR; transmembrane sensor
D QDY63_12935 DUF4880 domain-containing protein K07165 fecR; transmembrane sensor
D QDY63_13225 FecR family protein K07165 fecR; transmembrane sensor
D QDY63_14305 FecR domain-containing protein K07165 fecR; transmembrane sensor
D QDY63_14365 FecR domain-containing protein K07165 fecR; transmembrane sensor
D QDY63_16650 FecR domain-containing protein K07165 fecR; transmembrane sensor
D QDY63_16685 FecR domain-containing protein K07165 fecR; transmembrane sensor
D QDY63_16845 FecR domain-containing protein K07165 fecR; transmembrane sensor
D QDY63_17975 FecR family protein K07165 fecR; transmembrane sensor
D QDY63_18750 FecR domain-containing protein K07165 fecR; transmembrane sensor
D QDY63_19100 FecR family protein K07165 fecR; transmembrane sensor
D QDY63_19160 FecR family protein K07165 fecR; transmembrane sensor
D QDY63_23065 FecR domain-containing protein K07165 fecR; transmembrane sensor
D QDY63_25590 FecR family protein K07165 fecR; transmembrane sensor
D QDY63_27485 FecR family protein K07165 fecR; transmembrane sensor
D QDY63_19550 response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D QDY63_09590 ATP-binding protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D QDY63_12640 PAS domain-containing protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D QDY63_09085 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D QDY63_09080 SpoIIE family protein phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D QDY63_09075 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D QDY63_21815 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecule (CAM) interaction
C 04517 IgSF CAM signaling
C 04518 Integrin signaling
C 04519 Cadherin signaling
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagocytosis
C 04142 Lysosome biogenesis
C 04146 Peroxisome [PATH:pbre04146]
D QDY63_21730 CaiB/BaiF CoA-transferase family protein K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D QDY63_09620 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_13460 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22265 fadD1; (GenBank) long-chain-fatty-acid--CoA ligase FadD1 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22270 fadD2; (GenBank) long-chain-fatty-acid--CoA ligase FadD2 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_15760 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D QDY63_26135 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D QDY63_18340 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D QDY63_18345 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D QDY63_12260 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D QDY63_12900 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D QDY63_01715 katE; (GenBank) catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D QDY63_09745 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D QDY63_12200 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D QDY63_25515 katB; (GenBank) catalase KatB K03781 katE; catalase [EC:1.11.1.6]
D QDY63_26590 catalase K03781 katE; catalase [EC:1.11.1.6]
D QDY63_22385 Fe-Mn family superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
D QDY63_24685 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04149 Peroxisome - yeast
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:pbre04148]
D QDY63_25015 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D QDY63_24860 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
C 04156 Integrated stress response (ISR) signaling pathway [PATH:pbre04156]
D QDY63_09540 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D QDY63_05200 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_05610 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_10940 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_23220 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_23225 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_27110 tRNA-Ile K14230 tRNA-Met; tRNA Met
D QDY63_05125 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D QDY63_23165 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D QDY63_28785 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pbre02024]
D QDY63_03925 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D QDY63_26945 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D QDY63_26935 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D QDY63_27790 alpha/beta hydrolase K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D QDY63_05040 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D QDY63_19885 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D QDY63_02865 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D QDY63_17530 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D QDY63_19605 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D QDY63_19695 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D QDY63_19320 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D QDY63_19325 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D QDY63_09885 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D QDY63_19810 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D QDY63_17805 trbB; (GenBank) P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D QDY63_17800 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D QDY63_17795 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D QDY63_17790 trbE; (GenBank) conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D QDY63_17785 trbJ; (GenBank) P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D QDY63_17775 trbL; (GenBank) P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D QDY63_17770 trbF; (GenBank) conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D QDY63_17765 trbG; (GenBank) P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D QDY63_17760 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D QDY63_20390 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D QDY63_23850 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D QDY63_26975 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D QDY63_20405 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D QDY63_26965 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D QDY63_20400 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D QDY63_26970 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D QDY63_20410 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D QDY63_26980 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D QDY63_04105 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_07575 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_11525 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_11870 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_13125 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_04110 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_07565 livH; (GenBank) high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_11520 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_11865 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_13105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_04115 livM; (GenBank) high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_07560 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_11515 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_11860 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_13110 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_04120 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_07555 livG; (GenBank) high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_11855 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_13115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_04125 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_07550 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_11510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_11850 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_13120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_09620 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_13460 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22265 fadD1; (GenBank) long-chain-fatty-acid--CoA ligase FadD1 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22270 fadD2; (GenBank) long-chain-fatty-acid--CoA ligase FadD2 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_02320 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D QDY63_26915 crp; (GenBank) cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D QDY63_01735 zur; (GenBank) zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D QDY63_26185 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D QDY63_26220 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D QDY63_07900 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D QDY63_07715 adeC; (GenBank) AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_15895 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_18910 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_24265 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_06460 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D QDY63_15010 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D QDY63_15555 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D QDY63_06455 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D QDY63_15005 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D QDY63_15560 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D QDY63_06450 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D QDY63_14990 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D QDY63_15565 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D QDY63_06470 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D QDY63_14985 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D QDY63_15570 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D QDY63_01320 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D QDY63_26790 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D QDY63_05190 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D QDY63_26625 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D QDY63_06535 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D QDY63_22760 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D QDY63_28235 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D QDY63_03010 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D QDY63_06850 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa [PATH:pbre02025]
D QDY63_28080 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D QDY63_28085 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D QDY63_28075 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D QDY63_28070 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D QDY63_28090 pilH; (GenBank) twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D QDY63_28095 pilG; (GenBank) twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D QDY63_03790 cpdA; (GenBank) 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D QDY63_02320 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D QDY63_26915 crp; (GenBank) cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D QDY63_09025 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D QDY63_27790 alpha/beta hydrolase K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D QDY63_05040 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D QDY63_19885 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D QDY63_26945 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D QDY63_26935 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D QDY63_21670 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D QDY63_25780 7TM diverse intracellular signaling domain-containing protein K20971 ladS; two-component system, sensor histidine kinase LadS
D QDY63_04365 response regulator K20972 retS; two-component system, sensor histidine kinase RetS
D QDY63_17510 uvrY; (GenBank) UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D QDY63_18830 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D QDY63_10610 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D QDY63_20160 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D QDY63_21875 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D QDY63_19550 response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D QDY63_09590 ATP-binding protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D QDY63_12640 PAS domain-containing protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D QDY63_09085 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D QDY63_09080 SpoIIE family protein phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D QDY63_09075 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D QDY63_21815 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D QDY63_09155 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D QDY63_00250 serine/threonine-protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D QDY63_00255 protein phosphatase 2C domain-containing protein K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
D QDY63_00260 tagF; (GenBank) type VI secretion system-associated protein TagF K11890 impM; type VI secretion system protein ImpM
D QDY63_00265 tssM; (GenBank) type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D QDY63_00275 tssK; (GenBank) type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D QDY63_00285 tagH; (GenBank) type VI secretion system-associated FHA domain protein TagH K11913 fha1; type VI secretion system protein
D QDY63_00290 tssA; (GenBank) type VI secretion system protein TssA K11902 impA; type VI secretion system protein ImpA
D QDY63_00295 tssB; (GenBank) type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D QDY63_00300 tssC; (GenBank) type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D QDY63_00310 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D QDY63_04035 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D QDY63_00350 tssG; (GenBank) type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D QDY63_00355 tssH; (GenBank) type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D QDY63_06970 methyl-accepting chemotaxis protein K13487 wspA; methyl-accepting chemotaxis protein WspA
D QDY63_06990 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D QDY63_06975 chemotaxis protein CheW K13488 wspB; chemotaxis-related protein WspB
D QDY63_06985 chemotaxis protein CheW K13489 wspD; chemotaxis-related protein WspD
D QDY63_06995 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D QDY63_07000 diguanylate cyclase K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D QDY63_04750 diguanylate cyclase K21021 tpbB; diguanylate cyclase [EC:2.7.7.65]
D QDY63_01165 EAL domain-containing protein K21023 mucR; diguanylate cyclase [EC:2.7.7.65]
D QDY63_15900 EAL domain-containing protein K21023 mucR; diguanylate cyclase [EC:2.7.7.65]
D QDY63_26515 EAL domain-containing protein K21023 mucR; diguanylate cyclase [EC:2.7.7.65]
D QDY63_22395 EAL domain-containing protein K21024 bifA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D QDY63_19040 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D QDY63_24220 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D QDY63_19045 glycosyltransferase K25205 pslC; polysaccharide biosynthesis protein PslC
D QDY63_19050 polysaccharide export protein K20987 pslD; polysaccharide biosynthesis/export protein PslD
D QDY63_19055 exopolysaccharide transport family protein K20998 pslE; polysaccharide biosynthesis protein PslE
D QDY63_19060 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF
D QDY63_19065 beta-xylosidase K21000 pslG; polysaccharide biosynthesis protein PslG
D QDY63_19070 glycosyltransferase family 4 protein K21001 pslH; polysaccharide biosynthesis protein PslH
D QDY63_19075 glycosyltransferase family 1 protein K21002 pslI; polysaccharide biosynthesis protein PslI
D QDY63_19080 O-antigen ligase family protein K21003 pslJ; polysaccharide biosynthesis protein PslJ
D QDY63_19090 lipid II flippase MurJ K21004 pslK; polysaccharide biosynthesis protein PslK
D QDY63_24175 alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33]
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pbre02030]
D QDY63_01160 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_01970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_03225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_03230 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_03570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_04420 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_04915 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_05545 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_09570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_09670 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_12740 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_15305 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_15485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_16315 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_16740 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_18605 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_18615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_22055 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_22235 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_22775 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_23085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_25095 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_26510 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_29095 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_20790 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D QDY63_20930 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D QDY63_24295 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D QDY63_10635 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_11760 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_13195 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_21305 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_00100 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_24935 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_24940 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_24950 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_09170 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D QDY63_09195 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D QDY63_09200 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D QDY63_09160 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D QDY63_09165 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D QDY63_09175 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D QDY63_15220 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D QDY63_19430 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_21805 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_24280 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_15215 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D QDY63_21800 cheR; (GenBank) protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D QDY63_09050 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D QDY63_09100 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D QDY63_09105 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D QDY63_03865 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D QDY63_09180 flagellar motor protein K02556 motA; chemotaxis protein MotA
D QDY63_03870 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D QDY63_09185 motD; (GenBank) flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pbre02040]
D QDY63_09040 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D QDY63_09045 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D QDY63_09050 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D QDY63_09055 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D QDY63_09060 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D QDY63_09065 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D QDY63_09090 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D QDY63_09095 fliL; (GenBank) flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D QDY63_28770 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D QDY63_09100 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D QDY63_09105 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D QDY63_09110 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D QDY63_09115 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D QDY63_09120 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D QDY63_09125 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D QDY63_09140 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D QDY63_09130 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D QDY63_21810 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D QDY63_00935 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D QDY63_21795 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D QDY63_21790 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D QDY63_21785 flgD; (GenBank) flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D QDY63_21780 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D QDY63_08960 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D QDY63_08965 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D QDY63_08970 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D QDY63_08975 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D QDY63_08980 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D QDY63_08985 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D QDY63_08990 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D QDY63_23490 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D QDY63_09000 flagellin K02406 fliC; flagellin
D QDY63_09010 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D QDY63_09015 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D QDY63_09020 fliT; (GenBank) flagellar protein FliT K02423 fliT; flagellar protein FliT
D QDY63_03865 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D QDY63_09180 flagellar motor protein K02556 motA; chemotaxis protein MotA
D QDY63_03870 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D QDY63_09185 motD; (GenBank) flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D QDY63_21815 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D QDY63_21820 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D QDY63_02520 tcyJ; (GenBank) cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D QDY63_28470 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D QDY63_27100 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D QDY63_09025 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D QDY63_24655 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D QDY63_09035 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D QDY63_09155 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D QDY63_07315 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagosome formation
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:pbre04981]
D QDY63_28735 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D QDY63_28335 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D QDY63_25480 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D QDY63_27585 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D QDY63_28390 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D QDY63_16525 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism [PATH:pbre04980]
D QDY63_22745 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D QDY63_16525 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D QDY63_03150 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D QDY63_03155 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D QDY63_03495 aromatic amino acid ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pbre01501]
D QDY63_22720 OprD family porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D QDY63_23200 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D QDY63_20620 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D QDY63_14270 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D QDY63_14265 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D QDY63_13665 ATP-binding protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D QDY63_13660 winged helix-turn-helix domain-containing protein K18073 parR; two-component system, OmpR family, response regulator ParR
D QDY63_07725 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_15740 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_23110 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_23120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_07720 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_15735 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_23115 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_23125 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_07715 adeC; (GenBank) AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_15895 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_18910 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_24265 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_03760 TolC family outer membrane protein K12340 tolC; outer membrane protein
D QDY63_17075 TolC family protein K12340 tolC; outer membrane protein
D QDY63_03360 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D QDY63_19170 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D QDY63_25915 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D QDY63_24400 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pbre01502]
D QDY63_05565 ddlA; (GenBank) D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D QDY63_24360 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D QDY63_00030 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D QDY63_24390 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D QDY63_24385 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D QDY63_24370 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pbre01503]
D QDY63_21745 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D QDY63_21750 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D QDY63_13665 ATP-binding protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D QDY63_13660 winged helix-turn-helix domain-containing protein K18073 parR; two-component system, OmpR family, response regulator ParR
D QDY63_16085 arnC; (GenBank) undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D QDY63_16080 arnA; (GenBank) bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D QDY63_16075 arnD; (GenBank) 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D QDY63_16070 arnT; (GenBank) lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D QDY63_16065 arnE; (GenBank) 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D QDY63_16060 arnF; (GenBank) 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D QDY63_09345 M10 family metallopeptidase C-terminal domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40]
D QDY63_11725 serralysin family metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D QDY63_16295 serralysin family metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D QDY63_25035 M10 family metallopeptidase C-terminal domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40]
D QDY63_22495 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D QDY63_00730 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D QDY63_03910 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D QDY63_19710 L,D-transpeptidase family protein K19236 ldtA_B_C_E; L,D-transpeptidase
D QDY63_08070 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D QDY63_01775 dsbA; (GenBank) thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D QDY63_08570 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D QDY63_07725 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_15740 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_23110 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_23120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_07720 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_15735 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_23115 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_23125 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_03760 TolC family outer membrane protein K12340 tolC; outer membrane protein
D QDY63_17075 TolC family protein K12340 tolC; outer membrane protein
D QDY63_07275 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D QDY63_23230 mprF; (GenBank) bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pbre01000]
C 01001 Protein kinases [BR:pbre01001]
D QDY63_04605 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D QDY63_00250 serine/threonine-protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D QDY63_00600 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D QDY63_06300 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D QDY63_15600 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D QDY63_22180 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D QDY63_00425 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D QDY63_21745 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D QDY63_02580 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D QDY63_21760 ATP-binding protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D QDY63_27520 creC; (GenBank) two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D QDY63_00900 copS; (GenBank) copper resistance membrane spanning protein CopS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_05520 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_20555 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_24325 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_19320 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D QDY63_09890 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D QDY63_19815 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D QDY63_08025 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D QDY63_13665 ATP-binding protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D QDY63_11590 histidine kinase sensor domain-containing protein K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D QDY63_12880 sensor histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D QDY63_15750 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D QDY63_16805 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D QDY63_12325 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D QDY63_12335 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D QDY63_21670 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D QDY63_06900 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_16150 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_18880 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_19535 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_04505 PAS domain-containing protein K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D QDY63_03030 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D QDY63_02690 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D QDY63_22995 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D QDY63_01795 KinB sensor domain-containing domain K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D QDY63_23700 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D QDY63_09170 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D QDY63_28075 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D QDY63_06990 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D QDY63_09030 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D QDY63_24915 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D QDY63_19550 response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D QDY63_09590 ATP-binding protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D QDY63_12640 PAS domain-containing protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D QDY63_25780 7TM diverse intracellular signaling domain-containing protein K20971 ladS; two-component system, sensor histidine kinase LadS
D QDY63_04365 response regulator K20972 retS; two-component system, sensor histidine kinase RetS
C 01009 Protein phosphatases and associated proteins [BR:pbre01009]
D QDY63_27935 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D QDY63_09540 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D QDY63_03845 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D QDY63_24800 HAD-IB family phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D QDY63_28320 haloacid dehalogenase-like hydrolase K21830 pchP; phosphoethanolamine/phosphocholine phosphatase [EC:3.1.3.75]
C 01002 Peptidases and inhibitors [BR:pbre01002]
D QDY63_13255 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D QDY63_13965 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D QDY63_23755 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D QDY63_25355 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D QDY63_25230 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D QDY63_04515 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D QDY63_10590 pcp; (GenBank) pyroglutamyl-peptidase I K01304 PGPEP1; pyroglutamyl-peptidase [EC:3.4.19.3]
D QDY63_06705 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D QDY63_28565 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D QDY63_10495 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D QDY63_03405 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D QDY63_01235 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D QDY63_06785 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D QDY63_02900 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D QDY63_20140 N-acetylglutaminylglutamine amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D QDY63_19025 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D QDY63_19710 L,D-transpeptidase family protein K19236 ldtA_B_C_E; L,D-transpeptidase
D QDY63_13320 L,D-transpeptidase family protein K21470 ldtD; L,D-transpeptidase
D QDY63_20735 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D QDY63_16440 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D QDY63_01600 prlC; (GenBank) oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D QDY63_01610 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D QDY63_09345 M10 family metallopeptidase C-terminal domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40]
D QDY63_11725 serralysin family metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D QDY63_16295 serralysin family metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D QDY63_25035 M10 family metallopeptidase C-terminal domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40]
D QDY63_28240 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D QDY63_28245 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D QDY63_23970 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D QDY63_27685 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D QDY63_11925 M20/M25/M40 family metallo-hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D QDY63_07150 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D QDY63_07785 M20 family metallopeptidase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D QDY63_07210 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D QDY63_15790 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D QDY63_19225 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D QDY63_28710 pepP; (GenBank) Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D QDY63_05170 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D QDY63_19575 htpX; (GenBank) protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D QDY63_08075 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D QDY63_07250 rseP; (GenBank) sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D QDY63_26040 zinc-dependent peptidase K09933 mtfA; MtfA peptidase
D QDY63_08070 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D QDY63_05890 algW; (GenBank) Do family serine endopeptidase AlgW K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D QDY63_08445 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D QDY63_25895 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D QDY63_12025 pbpG; (GenBank) D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D QDY63_06170 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D QDY63_21010 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D QDY63_12060 clpP; (GenBank) ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D QDY63_12070 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D QDY63_23890 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D QDY63_20630 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D QDY63_23950 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D QDY63_03185 pip; (GenBank) prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D QDY63_16240 alpha/beta hydrolase K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
D QDY63_02985 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D QDY63_20425 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D QDY63_28500 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D QDY63_21585 sppA; (GenBank) signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D QDY63_17705 sohB; (GenBank) protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D QDY63_16455 rhomboid family intramembrane serine protease K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D QDY63_25875 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D QDY63_03325 hslV; (GenBank) ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D QDY63_05570 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D QDY63_13755 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D QDY63_18600 yegQ; (GenBank) tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D QDY63_16200 U32 family peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D QDY63_14255 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]
D QDY63_14250 U32 family peptidase K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]
D QDY63_24705 pmbA; (GenBank) metalloprotease PmbA K03592 pmbA; PmbA protein
D QDY63_24715 tldD; (GenBank) metalloprotease TldD K03568 tldD; TldD protein
D QDY63_15805 eco; (GenBank) serine protease inhibitor ecotin K08276 eco; ecotin
D QDY63_04465 alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
D QDY63_03940 hflC; (GenBank) protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D QDY63_03935 hflK; (GenBank) FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:pbre01003]
D QDY63_16000 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D QDY63_28215 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_04475 pbpC; (GenBank) peptidoglycan glycosyltransferase PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D QDY63_05360 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D QDY63_03360 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D QDY63_24375 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_25910 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_27790 alpha/beta hydrolase K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D QDY63_19060 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF
D QDY63_19070 glycosyltransferase family 4 protein K21001 pslH; polysaccharide biosynthesis protein PslH
D QDY63_19075 glycosyltransferase family 1 protein K21002 pslI; polysaccharide biosynthesis protein PslI
D QDY63_24170 alg8; (GenBank) mannuronan synthase K19290 alg8; mannuronan synthase [EC:2.4.1.33]
D QDY63_03200 mdoH; (GenBank) glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D QDY63_02170 pgaC; (GenBank) poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pbre01005]
D QDY63_07275 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D QDY63_07280 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D QDY63_24340 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D QDY63_07265 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D QDY63_18525 lpxH; (GenBank) UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D QDY63_21645 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D QDY63_01405 lysophospholipid acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D QDY63_20345 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D QDY63_08500 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D QDY63_15365 lpxO; (GenBank) lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D QDY63_03755 waaA; (GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D QDY63_16070 arnT; (GenBank) lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D QDY63_05810 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D QDY63_07310 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D QDY63_21635 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D QDY63_24635 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D QDY63_24630 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D QDY63_03650 waaC; (GenBank) lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D QDY63_03645 waaF; (GenBank) lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D QDY63_03655 glycosyltransferase family 4 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D QDY63_03660 rfaP; (GenBank) lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D QDY63_16420 phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D QDY63_24440 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D QDY63_01385 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D QDY63_03720 hldE; (GenBank) bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D QDY63_19865 glycosyltransferase family 4 protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
D QDY63_05040 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D QDY63_19885 glycosyltransferase family 2 protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D QDY63_15470 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pbre01011]
D QDY63_24595 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D QDY63_21625 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D QDY63_24365 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D QDY63_24380 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D QDY63_24395 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D QDY63_05565 ddlA; (GenBank) D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D QDY63_24360 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D QDY63_00030 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D QDY63_05805 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D QDY63_25875 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D QDY63_24385 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D QDY63_24370 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D QDY63_15310 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D QDY63_25370 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D QDY63_03360 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D QDY63_05360 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D QDY63_04475 pbpC; (GenBank) peptidoglycan glycosyltransferase PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D QDY63_19170 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D QDY63_25915 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D QDY63_24400 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D QDY63_25895 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D QDY63_06170 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D QDY63_21010 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D QDY63_12025 pbpG; (GenBank) D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D QDY63_28215 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_24375 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_25910 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_19710 L,D-transpeptidase family protein K19236 ldtA_B_C_E; L,D-transpeptidase
D QDY63_13320 L,D-transpeptidase family protein K21470 ldtD; L,D-transpeptidase
D QDY63_20690 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D QDY63_27910 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D QDY63_25870 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D QDY63_25905 mltB; (GenBank) lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D QDY63_16615 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D QDY63_06755 mltF; (GenBank) membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D QDY63_21535 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D QDY63_24770 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D QDY63_25900 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D QDY63_00730 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D QDY63_03910 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D QDY63_01790 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D QDY63_19315 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D QDY63_25105 ampD; (GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pbre01004]
D QDY63_21560 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D QDY63_08995 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D QDY63_03450 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D QDY63_09580 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D QDY63_03435 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D QDY63_21545 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D QDY63_03440 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_04595 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_11560 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_13445 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_19145 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_21260 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_21555 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23185 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23865 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_23870 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D QDY63_09585 fabA; (GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D QDY63_07270 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D QDY63_09970 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D QDY63_12395 PaaI family thioesterase K17362 ACOT13; acyl-coenzyme A thioesterase 13 [EC:3.1.2.-]
D QDY63_19720 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D QDY63_25650 tesB; (GenBank) acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20]
D QDY63_00490 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-]
D QDY63_02270 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D QDY63_05260 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_15255 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_21975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D QDY63_17580 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D QDY63_20195 long-chain-acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-]
D QDY63_09620 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_13460 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22265 fadD1; (GenBank) long-chain-fatty-acid--CoA ligase FadD1 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22270 fadD2; (GenBank) long-chain-fatty-acid--CoA ligase FadD2 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_08270 long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D QDY63_12255 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D QDY63_17165 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D QDY63_07130 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D QDY63_21565 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D QDY63_27080 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D QDY63_01380 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D QDY63_21365 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pbre01008]
D QDY63_19305 MbtH family protein K05375 mbtH; MbtH protein
D QDY63_21755 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
C 01006 Prenyltransferases [BR:pbre01006]
D QDY63_26160 ispA; (GenBank) (2E,6E)-farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D QDY63_25405 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D QDY63_07235 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D QDY63_03920 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D QDY63_00410 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D QDY63_01690 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D QDY63_06240 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pbre01007]
D QDY63_10350 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D QDY63_18515 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D QDY63_05305 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D QDY63_26855 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D QDY63_24895 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D QDY63_18510 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D QDY63_03335 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D QDY63_23440 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D QDY63_25360 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D QDY63_23985 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D QDY63_25850 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D QDY63_07010 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D QDY63_22685 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D QDY63_06635 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D QDY63_01395 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D QDY63_01390 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D QDY63_18285 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D QDY63_23205 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D QDY63_10695 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D QDY63_21885 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D QDY63_10715 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D QDY63_10720 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D QDY63_08940 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D QDY63_19570 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D QDY63_22195 alaC; (GenBank) alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D QDY63_10330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D QDY63_06655 pyridoxal phosphate-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D QDY63_06260 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D QDY63_07200 dapC; (GenBank) succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D QDY63_12850 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_19980 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_24580 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D QDY63_27420 bioF; (GenBank) 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D QDY63_16830 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D QDY63_04695 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D QDY63_15585 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D QDY63_02255 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D QDY63_09990 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D QDY63_27370 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D QDY63_21935 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D QDY63_23625 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D QDY63_19310 aspartate aminotransferase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D QDY63_28555 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D QDY63_27970 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D QDY63_25800 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D QDY63_12580 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D QDY63_12145 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D QDY63_19990 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pbre00194]
D QDY63_01250 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D QDY63_01255 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D QDY63_01260 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D QDY63_01265 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D QDY63_01270 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D QDY63_01275 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D QDY63_01280 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D QDY63_01285 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D QDY63_01290 F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pbre03000]
D QDY63_02785 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D QDY63_10775 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D QDY63_11695 hpaA; (GenBank) 4-hydroxyphenylacetate catabolism regulatory protein HpaA K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D QDY63_17290 AraC family transcriptional regulator K05372 ybtA; AraC family transcriptional regulator
D QDY63_14430 AraC family transcriptional regulator K06599 chpD; AraC family transcriptional regulator, chemosensory pili system protein ChpD
D QDY63_11635 feaR; (GenBank) transcriptional regulator FeaR K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D QDY63_08345 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D QDY63_28505 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D QDY63_06415 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D QDY63_22190 GyrI-like domain-containing protein K13653 K13653; AraC family transcriptional regulator
D QDY63_06195 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D QDY63_14510 ada; (GenBank) bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D QDY63_27700 GlxA family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D QDY63_21940 argR; (GenBank) transcriptional regulator ArgR K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D QDY63_11710 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D QDY63_27730 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D QDY63_02235 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D QDY63_03105 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D QDY63_04090 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D QDY63_06110 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D QDY63_06285 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D QDY63_06315 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D QDY63_10070 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D QDY63_13100 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D QDY63_14185 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D QDY63_14390 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D QDY63_29100 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D QDY63_23665 metR; (GenBank) transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D QDY63_18550 nhaR; (GenBank) transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D QDY63_00210 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D QDY63_22370 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D QDY63_08375 cynR; (GenBank) transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D QDY63_27375 LysR family transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D QDY63_19670 cysB; (GenBank) HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D QDY63_28005 LysR substrate-binding domain-containing protein K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D QDY63_12415 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D QDY63_14270 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D QDY63_08310 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D QDY63_15605 LysR substrate-binding domain-containing protein K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D QDY63_00520 LysR substrate-binding domain-containing protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D QDY63_03805 LysR substrate-binding domain-containing protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D QDY63_04690 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D QDY63_06380 LysR substrate-binding domain-containing protein K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D QDY63_00620 LysR family transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator
D QDY63_04825 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D QDY63_11795 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D QDY63_01545 LysR family transcriptional regulator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator
D QDY63_14330 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D QDY63_23560 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D QDY63_10650 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D QDY63_11790 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D QDY63_13150 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D QDY63_15685 LacI family DNA-binding transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D QDY63_25080 cra; (GenBank) catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D QDY63_22210 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D QDY63_06720 treR; (GenBank) trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D QDY63_09285 phnF; (GenBank) phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D QDY63_03115 hutC; (GenBank) histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D QDY63_06795 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D QDY63_05085 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D QDY63_00560 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D QDY63_04950 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D QDY63_13610 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D QDY63_17440 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D QDY63_27760 betI; (GenBank) transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D QDY63_07730 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D QDY63_04680 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D QDY63_09410 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D QDY63_11985 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D QDY63_22045 TetR/AcrR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D QDY63_10220 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D QDY63_19210 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D QDY63_19850 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D QDY63_07100 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D QDY63_11485 helix-turn-helix domain-containing protein K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D QDY63_04170 TetR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D QDY63_19380 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D QDY63_00045 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_04845 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_11720 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_12540 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_12605 bkdR; (GenBank) Bkd operon transcriptional regulator BkdR K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_14970 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_16210 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_25680 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_25755 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_13035 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D QDY63_28640 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D QDY63_06030 LuxR C-terminal-related transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D QDY63_24465 LuxR C-terminal-related transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D QDY63_02125 winged helix DNA-binding protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D QDY63_08905 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D QDY63_19555 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D QDY63_19635 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D QDY63_04610 cueR; (GenBank) Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D QDY63_10145 soxR; (GenBank) redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D QDY63_05850 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D QDY63_05985 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D QDY63_05110 fur; (GenBank) ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D QDY63_01735 zur; (GenBank) zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D QDY63_07640 pcaR; (GenBank) pca regulon transcriptional regulator PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D QDY63_02320 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D QDY63_26915 crp; (GenBank) cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D QDY63_20885 fnr; (GenBank) fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D QDY63_14210 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D QDY63_16825 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D QDY63_06570 iscR; (GenBank) Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D QDY63_14450 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D QDY63_12615 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D QDY63_00630 hexR; (GenBank) transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D QDY63_22315 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D QDY63_26825 birA; (GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D QDY63_04385 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D QDY63_24085 type II toxin-antitoxin system MqsA family antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D QDY63_21225 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D QDY63_09025 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D QDY63_18500 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D QDY63_26005 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D QDY63_06205 norR; (GenBank) nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D QDY63_14230 norR; (GenBank) nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D QDY63_15090 sugar diacid recognition domain-containing protein K02647 cdaR; carbohydrate diacid regulator
D QDY63_27435 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein
D QDY63_18465 transcriptional regulator K07726 K07726; putative transcriptional regulator
D QDY63_27360 DNA-binding transcriptional regulator K07726 K07726; putative transcriptional regulator
D QDY63_18665 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D QDY63_18690 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D QDY63_03590 putA; (GenBank) trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D QDY63_13720 4Fe-4S binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D QDY63_20055 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D QDY63_01295 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D QDY63_17925 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D QDY63_08955 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D QDY63_22545 sigma-54-dependent transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D QDY63_08090 glycine cleavage system protein R K03567 gcvR; glycine cleavage system transcriptional repressor
D QDY63_00830 GNAT family N-acetyltransferase K06140 rnk; regulator of nucleoside diphosphate kinase
D QDY63_29010 rnk; (GenBank) nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D QDY63_28120 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D QDY63_05060 hypothetical protein K07733 alpA; prophage regulatory protein
D QDY63_25185 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D QDY63_26070 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D QDY63_00565 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D QDY63_28110 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D QDY63_00720 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D QDY63_05310 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D QDY63_12735 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D QDY63_26225 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D QDY63_24415 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pbre03021]
D QDY63_16245 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D QDY63_26600 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D QDY63_26760 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D QDY63_26755 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D QDY63_00165 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D QDY63_27100 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D QDY63_07370 rpoS; (GenBank) RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D QDY63_02225 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D QDY63_08055 rpoE; (GenBank) RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D QDY63_08540 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D QDY63_14110 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D QDY63_21095 sigX; (GenBank) RNA polymerase sigma factor SigX K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D QDY63_22150 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D QDY63_02080 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_06130 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_14310 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_14360 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_16645 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_16690 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_16850 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_17980 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_19105 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_27480 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D QDY63_28220 rpoH; (GenBank) RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D QDY63_24655 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D QDY63_09155 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D QDY63_07610 rapA; (GenBank) RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D QDY63_05210 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D QDY63_26200 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D QDY63_26785 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D QDY63_24845 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D QDY63_24840 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D QDY63_08060 RseA family anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA
D QDY63_08065 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D QDY63_00720 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D QDY63_05310 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D QDY63_12735 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D QDY63_05150 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D QDY63_19735 greB; (GenBank) transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D QDY63_28805 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D QDY63_10190 Rho-binding antiterminator K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:pbre03019]
D QDY63_21600 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D QDY63_24730 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D QDY63_23945 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D QDY63_03980 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D QDY63_03885 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D QDY63_24115 rhlB; (GenBank) ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D QDY63_25670 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D QDY63_27950 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D QDY63_19590 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D QDY63_02630 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D QDY63_08900 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D QDY63_07315 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D QDY63_05235 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D QDY63_28805 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D QDY63_05125 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D QDY63_23165 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D QDY63_03925 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D QDY63_28870 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D QDY63_05285 polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D QDY63_28410 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D QDY63_10610 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D QDY63_20160 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D QDY63_21875 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D QDY63_21115 rraA; (GenBank) ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D QDY63_24670 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D QDY63_08530 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D QDY63_25720 hrpB; (GenBank) ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pbre03011]
D QDY63_19965 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D QDY63_07215 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D QDY63_26695 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D QDY63_26605 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D QDY63_26640 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D QDY63_03990 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D QDY63_26745 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D QDY63_26655 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D QDY63_24865 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D QDY63_26730 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D QDY63_26610 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D QDY63_26750 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D QDY63_26615 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D QDY63_26660 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D QDY63_05230 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D QDY63_06855 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D QDY63_26680 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D QDY63_03995 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D QDY63_26705 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D QDY63_25375 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D QDY63_27090 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D QDY63_26775 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D QDY63_26710 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D QDY63_26725 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D QDY63_26720 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D QDY63_26665 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D QDY63_26650 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D QDY63_04005 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D QDY63_26770 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D QDY63_26780 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D QDY63_26765 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D QDY63_24870 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D QDY63_26675 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D QDY63_26630 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D QDY63_26690 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D QDY63_26595 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D QDY63_26645 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D QDY63_06870 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D QDY63_10710 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D QDY63_25400 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D QDY63_26700 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D QDY63_26715 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D QDY63_26670 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D QDY63_25395 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D QDY63_00095 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D QDY63_26685 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D QDY63_26635 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D QDY63_03345 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D QDY63_23705 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D QDY63_21570 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D QDY63_00090 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D QDY63_01335 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D QDY63_10705 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D QDY63_06160 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D QDY63_26620 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D QDY63_05755 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D QDY63_01940 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_04705 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_05405 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_06420 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_19195 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_26850 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_01955 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_04720 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_05420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_06435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_19180 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_26835 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_01960 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_01965 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_04725 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_05425 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_06440 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_19175 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_26830 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pbre03009]
D QDY63_23945 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D QDY63_04605 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D QDY63_03885 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D QDY63_23940 era; (GenBank) GTPase Era K03595 era; GTPase
D QDY63_25390 cgtA; (GenBank) Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D QDY63_00720 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D QDY63_05310 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D QDY63_12735 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D QDY63_05210 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D QDY63_26200 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D QDY63_26785 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D QDY63_07965 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D QDY63_27030 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D QDY63_01420 rsmB; (GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D QDY63_24495 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D QDY63_28250 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D QDY63_27975 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D QDY63_01305 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D QDY63_24410 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D QDY63_24425 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D QDY63_07095 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D QDY63_07145 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D QDY63_03985 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D QDY63_05165 rlmE; (GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D QDY63_23990 rlmF; (GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D QDY63_25535 class I SAM-dependent methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D QDY63_25920 rlmH; (GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D QDY63_05250 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D QDY63_14130 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D QDY63_28305 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D QDY63_03615 rlmJ; (GenBank) 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D QDY63_21020 rlmKL; (GenBank) bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D QDY63_20720 rlmM; (GenBank) 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D QDY63_06615 rlmN; (GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D QDY63_08720 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D QDY63_19475 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D QDY63_20365 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D QDY63_22450 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D QDY63_21595 rluC; (GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D QDY63_25300 rluD; (GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D QDY63_25765 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D QDY63_23260 rRNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D QDY63_05465 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase / [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338]
D QDY63_05550 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D QDY63_02585 rimK; (GenBank) 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D QDY63_06860 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D QDY63_23250 rimO; (GenBank) 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D QDY63_24460 OsmC domain/YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D QDY63_04400 prmA; (GenBank) 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D QDY63_20235 prmB; (GenBank) 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D QDY63_18375 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D QDY63_21600 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D QDY63_24730 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D QDY63_28115 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D QDY63_27800 dbpA; (GenBank) ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D QDY63_19590 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D QDY63_08605 DEAD/DEAH box helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D QDY63_03880 rsgA; (GenBank) small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D QDY63_06650 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D QDY63_03930 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D QDY63_01470 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D QDY63_00170 spoT; (GenBank) bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D QDY63_05220 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D QDY63_05205 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D QDY63_25925 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D QDY63_25825 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D QDY63_05160 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein
D QDY63_24710 yjgA; (GenBank) ribosome biogenesis factor YjgA K09889 yjgA; ribosome-associated protein
D QDY63_21025 ribosome modulation factor K03812 rmf; ribosome modulation factor
D QDY63_24660 raiA; (GenBank) ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D QDY63_05745 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D QDY63_21575 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pbre03016]
D QDY63_17730 ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D QDY63_27065 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D QDY63_10350 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D QDY63_23205 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D QDY63_25360 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D QDY63_25850 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D QDY63_23440 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D QDY63_18515 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D QDY63_03335 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D QDY63_07010 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D QDY63_22685 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D QDY63_21885 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D QDY63_10695 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D QDY63_18285 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D QDY63_18510 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D QDY63_23985 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D QDY63_06635 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D QDY63_10715 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D QDY63_10720 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D QDY63_26855 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D QDY63_24895 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D QDY63_03190 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D QDY63_21160 alanyl-tRNA editing protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D QDY63_26900 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D QDY63_25815 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D QDY63_28195 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D QDY63_23270 tsaA; (GenBank) tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D QDY63_10465 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D QDY63_05225 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D QDY63_07350 truD; (GenBank) tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D QDY63_06575 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D QDY63_19230 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D QDY63_01470 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D QDY63_03920 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D QDY63_01315 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D QDY63_01310 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D QDY63_18535 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D QDY63_02675 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D QDY63_01330 rnpA; (GenBank) ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D QDY63_24420 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D QDY63_23500 rnt; (GenBank) ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D QDY63_00150 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D QDY63_08390 rnd; (GenBank) ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D QDY63_25465 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D QDY63_01395 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D QDY63_01390 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D QDY63_05305 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D QDY63_23545 ybaK; (GenBank) Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D QDY63_10260 YbaK/prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D QDY63_23915 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D QDY63_09920 dusA; (GenBank) tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D QDY63_04390 dusB; (GenBank) tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D QDY63_10390 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D QDY63_23905 cmoA; (GenBank) carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D QDY63_23910 cmoB; (GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D QDY63_04485 methyltransferase domain-containing protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D QDY63_25570 trmA; (GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D QDY63_06865 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D QDY63_06560 trmJ; (GenBank) tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D QDY63_10150 tRNA (adenine(22)-N(1))-methyltransferase TrmK K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D QDY63_03015 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D QDY63_19475 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D QDY63_20365 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D QDY63_18360 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D QDY63_21715 ttcA; (GenBank) tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D QDY63_08080 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D QDY63_20715 tusA; (GenBank) sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D QDY63_18255 tusB; (GenBank) sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D QDY63_18250 tusC; (GenBank) sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D QDY63_18245 tusD; (GenBank) sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D QDY63_18260 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D QDY63_06585 iscA; (GenBank) iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D QDY63_08035 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D QDY63_13655 miaE; (GenBank) tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D QDY63_20135 mnmC; (GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D QDY63_06525 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D QDY63_22620 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D QDY63_18680 queD; (GenBank) 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D QDY63_22625 queE; (GenBank) 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D QDY63_20540 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D QDY63_03895 queG; (GenBank) tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D QDY63_18530 mnmH; (GenBank) tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D QDY63_06530 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D QDY63_03040 thiI; (GenBank) tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D QDY63_07300 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D QDY63_07070 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D QDY63_27085 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D QDY63_03905 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D QDY63_07160 tcdA; (GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D QDY63_03980 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D QDY63_05235 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D QDY63_22015 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:pbre03012]
D QDY63_04445 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D QDY63_05215 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D QDY63_10700 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D QDY63_28925 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D QDY63_07220 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D QDY63_26735 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D QDY63_26740 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D QDY63_05790 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D QDY63_07230 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D QDY63_05795 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D QDY63_05750 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D QDY63_18320 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D QDY63_19650 elongation factor P K02356 efp; elongation factor P
D QDY63_07005 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D QDY63_24990 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D QDY63_25865 arfA; (GenBank) alternative ribosome rescue factor ArfA K09890 arfA; alternative ribosome-rescue factor
D QDY63_22440 arfB; (GenBank) alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pbre03110]
D QDY63_18325 clpA; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D QDY63_25290 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D QDY63_12065 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D QDY63_03320 hslU; (GenBank) ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D QDY63_09540 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D QDY63_05125 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D QDY63_06595 hscA; (GenBank) Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D QDY63_04210 Hsp70 family protein K04046 yegD; hypothetical chaperone protein
D QDY63_23165 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D QDY63_05130 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D QDY63_04215 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein
D QDY63_27000 DnaJ domain-containing protein K05801 djlA; DnaJ like chaperone protein
D QDY63_06590 hscB; (GenBank) co-chaperone HscB K04082 hscB; molecular chaperone HscB
D QDY63_02605 hslO; (GenBank) Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D QDY63_05120 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D QDY63_10395 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D QDY63_02595 S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D QDY63_23170 co-chaperone GroES K04078 groES; chaperonin GroES
D QDY63_08070 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D QDY63_05170 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D QDY63_01285 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D QDY63_03010 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D QDY63_22500 LTXXQ domain protein K06006 cpxP; periplasmic protein CpxP/Spy
D QDY63_04315 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D QDY63_13375 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D QDY63_08570 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D QDY63_18520 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D QDY63_12080 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D QDY63_20475 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D QDY63_25420 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D QDY63_28940 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D QDY63_25350 fkpB; (GenBank) FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D QDY63_05925 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D QDY63_16770 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D QDY63_17535 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D QDY63_17590 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D QDY63_27020 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D QDY63_17635 thioredoxin family protein K03671 TXN; thioredoxin
D QDY63_28810 trxA; (GenBank) thioredoxin TrxA K03671 TXN; thioredoxin
D QDY63_03545 trxC; (GenBank) thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D QDY63_26245 trxA; (GenBank) thioredoxin K05838 ybbN; putative thioredoxin
D QDY63_03005 grxC; (GenBank) glutaredoxin 3 K03676 grxC; glutaredoxin 3
D QDY63_23520 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D QDY63_01775 dsbA; (GenBank) thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D QDY63_06215 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D QDY63_28950 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D QDY63_06885 dsbC; (GenBank) bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D QDY63_19330 dsbD; (GenBank) protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D QDY63_09250 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D QDY63_19340 dsbG; (GenBank) thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:pbre04131]
D QDY63_06610 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D QDY63_24500 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D QDY63_20600 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D QDY63_23055 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D QDY63_09375 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D QDY63_22975 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D QDY63_09540 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:pbre03051]
D QDY63_09540 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pbre03032]
D QDY63_16600 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D QDY63_02785 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D QDY63_10775 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D QDY63_00390 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D QDY63_12075 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D QDY63_23995 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D QDY63_10725 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D QDY63_19960 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D QDY63_01340 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D QDY63_04010 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D QDY63_27095 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D QDY63_26570 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D QDY63_07290 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D QDY63_01345 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D QDY63_23975 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D QDY63_25860 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D QDY63_21525 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D QDY63_16590 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_25695 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_27475 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_20915 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D QDY63_07285 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D QDY63_01755 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D QDY63_20955 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D QDY63_27895 ligB; (GenBank) NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D QDY63_26110 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D QDY63_08770 hda; (GenBank) DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D QDY63_19995 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D QDY63_01355 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D QDY63_03830 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D QDY63_03815 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D QDY63_20655 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D QDY63_12435 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pbre03036]
D QDY63_02785 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D QDY63_10775 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D QDY63_23945 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D QDY63_16245 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D QDY63_00390 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D QDY63_12075 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D QDY63_23995 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D QDY63_10725 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D QDY63_19960 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D QDY63_04215 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein
D QDY63_01340 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D QDY63_22700 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D QDY63_04385 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D QDY63_03925 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D QDY63_22370 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D QDY63_00045 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_04845 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_11720 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_12540 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_12605 bkdR; (GenBank) Bkd operon transcriptional regulator BkdR K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_14970 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_16210 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_25680 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_25755 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D QDY63_24000 yejK; (GenBank) nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
D QDY63_20965 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D QDY63_22465 ScpA family protein K05896 scpA; segregation and condensation protein A
D QDY63_22460 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D QDY63_24350 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D QDY63_07320 ftsB; (GenBank) cell division protein FtsB K05589 ftsB; cell division protein FtsB
D QDY63_28230 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D QDY63_24400 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D QDY63_18305 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D QDY63_24405 ftsL; (GenBank) cell division protein FtsL K03586 ftsL; cell division protein FtsL
D QDY63_24355 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D QDY63_24375 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_28225 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D QDY63_24345 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D QDY63_20960 zipA; (GenBank) cell division protein ZipA K03528 zipA; cell division protein ZipA
D QDY63_03580 cell division protein ZapA K09888 zapA; cell division protein ZapA
D QDY63_28725 cell division protein ZapA K09888 zapA; cell division protein ZapA
D QDY63_28720 TIGR02449 family protein K09892 zapB; cell division protein ZapB
D QDY63_12175 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE
D QDY63_16435 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE
D QDY63_24890 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE
D QDY63_00730 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D QDY63_03910 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D QDY63_07725 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_15740 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_23110 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_23120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_20350 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D QDY63_20355 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D QDY63_20360 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D QDY63_20635 sulA; (GenBank) SOS-induced cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA
D QDY63_24750 mreB; (GenBank) rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D QDY63_24745 mreC; (GenBank) rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D QDY63_24740 mreD; (GenBank) rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D QDY63_25910 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_01300 ParA family protein K03496 parA; chromosome partitioning protein
D QDY63_03540 ParA family protein K03496 parA; chromosome partitioning protein
D QDY63_09190 ParA family protein K03496 parA; chromosome partitioning protein
D QDY63_17885 parA; (GenBank) ParA family partition ATPase K03496 parA; chromosome partitioning protein
D QDY63_01295 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D QDY63_17925 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D QDY63_03830 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D QDY63_03815 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D QDY63_01310 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D QDY63_01305 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D QDY63_29045 xerC; (GenBank) tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D QDY63_06880 xerD; (GenBank) site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D QDY63_22820 site-specific integrase K04763 xerD; integrase/recombinase XerD
D QDY63_23435 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D QDY63_01760 yihA; (GenBank) ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pbre03400]
D QDY63_07925 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D QDY63_05845 phrB; (GenBank) deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D QDY63_07990 ung; (GenBank) uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D QDY63_25940 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D QDY63_02935 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D QDY63_23470 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D QDY63_16245 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D QDY63_17740 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D QDY63_22750 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D QDY63_23675 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D QDY63_00115 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D QDY63_14510 ada; (GenBank) bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D QDY63_14515 alkB; (GenBank) DNA oxidative demethylase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D QDY63_10065 mug; (GenBank) G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D QDY63_01400 tag; (GenBank) DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D QDY63_13600 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D QDY63_28295 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D QDY63_00140 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D QDY63_12285 xthA; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D QDY63_06935 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D QDY63_20955 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D QDY63_27895 ligB; (GenBank) NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D QDY63_01755 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D QDY63_26580 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D QDY63_10335 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D QDY63_17505 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D QDY63_00640 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D QDY63_17950 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D QDY63_26760 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D QDY63_26755 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D QDY63_26600 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D QDY63_00165 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D QDY63_20605 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D QDY63_23425 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D QDY63_03915 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D QDY63_22795 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D QDY63_06680 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D QDY63_26155 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D QDY63_07290 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D QDY63_01345 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D QDY63_23975 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D QDY63_25860 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D QDY63_21525 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D QDY63_16590 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_25695 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_27475 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D QDY63_20915 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D QDY63_26570 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D QDY63_26110 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D QDY63_04735 recB; (GenBank) exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D QDY63_04730 recC; (GenBank) exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D QDY63_04740 recD; (GenBank) exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D QDY63_26540 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D QDY63_23315 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D QDY63_22670 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D QDY63_22665 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D QDY63_22675 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D QDY63_03340 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D QDY63_13510 SbcC/MukB-like Walker B domain-containing protein K03546 sbcC; DNA repair protein SbcC/Rad50
D QDY63_13515 exonuclease SbcCD subunit D C-terminal domain-containing protein K03547 sbcD; DNA repair protein SbcD/Mre11
D QDY63_25505 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D QDY63_01350 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D QDY63_00215 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D QDY63_23935 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D QDY63_20900 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D QDY63_05115 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D QDY63_09860 rdgC; (GenBank) recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D QDY63_22770 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D QDY63_19995 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D QDY63_01355 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D QDY63_20655 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D QDY63_00390 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D QDY63_12075 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D QDY63_23995 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D QDY63_10795 recombinase RecT K07455 recT; recombination protein RecT
D QDY63_11205 recombinase RecT K07455 recT; recombination protein RecT
D QDY63_04385 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D QDY63_10725 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D QDY63_19960 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D QDY63_02630 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D QDY63_08900 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D QDY63_23215 dinB; (GenBank) DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D QDY63_20630 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D QDY63_19120 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D QDY63_23310 recX; (GenBank) recombination regulator RecX K03565 recX; regulatory protein
D QDY63_00005 rep; (GenBank) DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D QDY63_26475 UvrD-helicase domain-containing protein K03658 helD; DNA helicase IV [EC:5.6.2.4]
D QDY63_07465 dinG; (GenBank) ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D QDY63_21770 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D QDY63_14160 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D QDY63_22000 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pbre03029]
D QDY63_24855 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D QDY63_05215 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D QDY63_10700 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D QDY63_07220 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D QDY63_26735 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D QDY63_26740 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D QDY63_23940 era; (GenBank) GTPase Era K03595 era; GTPase
D QDY63_26855 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D QDY63_25850 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D QDY63_22685 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D QDY63_03335 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D QDY63_11840 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D QDY63_13140 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D QDY63_17170 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D QDY63_24760 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D QDY63_24765 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D QDY63_24755 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D QDY63_14610 toprim domain-containing protein K17680 TWNK; twinkle mtDNA helicase [EC:5.6.2.3]
D QDY63_26570 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D QDY63_07255 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D QDY63_05125 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D QDY63_05120 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D QDY63_23165 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D QDY63_23170 co-chaperone GroES K04078 groES; chaperonin GroES
D QDY63_05130 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D QDY63_06575 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D QDY63_19230 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D QDY63_06590 hscB; (GenBank) co-chaperone HscB K04082 hscB; molecular chaperone HscB
D QDY63_23520 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D QDY63_23435 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D QDY63_01690 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D QDY63_06240 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D QDY63_01660 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D QDY63_01685 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D QDY63_01320 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D QDY63_01675 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D QDY63_01695 SCO family protein K07152 SCO1; protein SCO1
D QDY63_13380 SCO family protein K07152 SCO1; protein SCO1
D QDY63_09540 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pbre02000]
D QDY63_17315 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D QDY63_17320 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D QDY63_03715 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D QDY63_08565 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D QDY63_20695 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D QDY63_02025 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D QDY63_08700 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D QDY63_16285 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D QDY63_18905 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D QDY63_18970 cyclic peptide export ABC transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D QDY63_20685 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D QDY63_09355 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D QDY63_02285 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D QDY63_02290 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D QDY63_02295 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D QDY63_02300 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D QDY63_14500 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D QDY63_14495 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D QDY63_14490 modC; (GenBank) molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D QDY63_02555 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D QDY63_28620 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D QDY63_02545 tauC; (GenBank) taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein
D QDY63_02550 tauB; (GenBank) taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D QDY63_02040 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D QDY63_02345 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D QDY63_28600 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D QDY63_02050 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D QDY63_02340 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D QDY63_28590 ssuC; (GenBank) aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D QDY63_02045 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D QDY63_02335 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D QDY63_28585 ssuB; (GenBank) aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D QDY63_03965 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D QDY63_28360 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D QDY63_28690 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D QDY63_03960 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D QDY63_28365 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D QDY63_28685 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D QDY63_23535 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D QDY63_28370 putative 2-aminoethylphosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D QDY63_00550 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_10085 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_15660 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_18770 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_28540 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_28550 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D QDY63_28525 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D QDY63_28530 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D QDY63_28535 potA; (GenBank) polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D QDY63_20390 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D QDY63_23850 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D QDY63_26975 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D QDY63_20405 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D QDY63_26965 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D QDY63_20400 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D QDY63_26970 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D QDY63_20410 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D QDY63_26980 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D QDY63_01495 choX; (GenBank) choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_03135 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_09450 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_12765 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_17100 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_27705 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_27740 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D QDY63_03140 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D QDY63_27745 choW; (GenBank) choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D QDY63_03145 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D QDY63_27750 choV; (GenBank) choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D QDY63_25000 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D QDY63_24995 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D QDY63_25005 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D QDY63_25010 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D QDY63_15840 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D QDY63_22335 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D QDY63_21995 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D QDY63_22350 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D QDY63_22345 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D QDY63_22340 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D QDY63_10635 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_11760 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_13195 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_21305 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D QDY63_10645 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D QDY63_11770 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D QDY63_13200 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D QDY63_21310 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D QDY63_10640 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D QDY63_11765 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D QDY63_13190 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D QDY63_21315 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D QDY63_17665 substrate-binding domain-containing protein K17205 xltC; putative xylitol transport system substrate-binding protein
D QDY63_17660 ABC transporter permease K17206 xltB; putative xylitol transport system permease protein
D QDY63_17655 sugar ABC transporter ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein
D QDY63_12720 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D QDY63_12730 ABC transporter permease K17214 K17214; inositol transport system permease protein
D QDY63_12725 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D QDY63_18470 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D QDY63_18485 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D QDY63_18480 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D QDY63_18495 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D QDY63_18490 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D QDY63_15855 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D QDY63_15850 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D QDY63_15845 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D QDY63_01835 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D QDY63_24615 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D QDY63_01845 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D QDY63_24620 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D QDY63_01840 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D QDY63_24625 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D QDY63_01830 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component
D QDY63_24610 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D QDY63_24605 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D QDY63_00480 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D QDY63_12280 phosphate ABC transporter substrate-binding/OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein
D QDY63_00475 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D QDY63_00470 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D QDY63_00465 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D QDY63_09275 phnD; (GenBank) phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D QDY63_09280 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D QDY63_09270 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D QDY63_24300 transporter substrate-binding domain-containing protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D QDY63_07400 ABC transporter permease K10015 hisM; histidine transport system permease protein
D QDY63_12550 ABC transporter permease K10015 hisM; histidine transport system permease protein
D QDY63_07405 ABC transporter permease K10016 hisQ; histidine transport system permease protein
D QDY63_12555 ABC transporter permease K10016 hisQ; histidine transport system permease protein
D QDY63_07390 ATP-binding cassette domain-containing protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_12545 ATP-binding cassette domain-containing protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_07410 transporter substrate-binding domain-containing protein K10014 hisJ; histidine transport system substrate-binding protein
D QDY63_12560 ABC transporter substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D QDY63_23570 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D QDY63_23580 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein
D QDY63_23575 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D QDY63_23585 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_06320 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D QDY63_24105 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D QDY63_24100 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D QDY63_24095 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D QDY63_24090 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_02520 tcyJ; (GenBank) cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D QDY63_28470 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D QDY63_02515 tcyL; (GenBank) cystine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D QDY63_02510 yecC; (GenBank) L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_21970 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D QDY63_21960 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D QDY63_21965 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein
D QDY63_21950 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_04105 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_07575 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_11525 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_11870 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_13125 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D QDY63_04110 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_07565 livH; (GenBank) high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_11520 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_11865 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_13105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D QDY63_04115 livM; (GenBank) high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_07560 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_11515 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_11860 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_13110 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D QDY63_04120 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_07555 livG; (GenBank) high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_11855 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_13115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D QDY63_04125 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_07550 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_11510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_11850 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_13120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D QDY63_01700 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D QDY63_02420 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D QDY63_02485 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D QDY63_01705 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D QDY63_02475 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D QDY63_01710 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D QDY63_02480 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D QDY63_04275 urtA; (GenBank) urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D QDY63_04270 urtB; (GenBank) urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D QDY63_04265 urtC; (GenBank) urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D QDY63_04260 urtD; (GenBank) urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D QDY63_04255 urtE; (GenBank) urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D QDY63_02820 ABC transporter substrate-binding protein K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein
D QDY63_02815 ABC transporter permease K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D QDY63_02810 ABC transporter permease K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D QDY63_02825 ABC transporter ATP-binding protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_06280 ATP-binding cassette domain-containing protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_00585 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_02440 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_02975 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_03205 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_03210 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_06275 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_17630 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_20920 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_21450 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_26190 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_27815 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_27945 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_28820 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D QDY63_00590 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D QDY63_02425 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D QDY63_02430 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D QDY63_03215 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D QDY63_06265 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D QDY63_06270 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D QDY63_17620 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D QDY63_17625 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D QDY63_28825 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D QDY63_28830 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D QDY63_02435 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_03220 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_17615 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_28835 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D QDY63_00100 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_24935 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_24940 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_24950 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D QDY63_24955 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D QDY63_24960 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D QDY63_24965 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D QDY63_24970 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D QDY63_06460 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D QDY63_15010 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D QDY63_15555 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D QDY63_06455 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D QDY63_15005 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D QDY63_15560 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D QDY63_06450 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D QDY63_14990 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D QDY63_15565 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D QDY63_06470 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D QDY63_14985 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D QDY63_15570 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D QDY63_16620 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D QDY63_16625 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D QDY63_17540 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D QDY63_16630 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D QDY63_17545 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D QDY63_16635 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D QDY63_17550 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D QDY63_16640 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D QDY63_17555 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D QDY63_05330 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D QDY63_05335 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D QDY63_05340 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D QDY63_04285 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D QDY63_18865 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D QDY63_04280 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D QDY63_04290 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D QDY63_26175 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D QDY63_01740 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D QDY63_19285 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D QDY63_01725 znuB; (GenBank) zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D QDY63_19295 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D QDY63_01730 znuC; (GenBank) zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D QDY63_19290 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D QDY63_00750 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D QDY63_00745 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D QDY63_00740 ATP-binding cassette domain-containing protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D QDY63_05025 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D QDY63_05030 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D QDY63_23965 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D QDY63_23960 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D QDY63_24650 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D QDY63_13740 ABC transporter permease subunit K19341 nosY; Cu-processing system permease protein
D QDY63_13735 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D QDY63_19750 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein
D QDY63_19745 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D QDY63_19755 Gldg family protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D QDY63_20560 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D QDY63_20570 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D QDY63_20565 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D QDY63_09235 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D QDY63_09230 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D QDY63_09225 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D QDY63_09220 ccmA; (GenBank) cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D QDY63_28225 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D QDY63_28230 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D QDY63_09825 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D QDY63_28760 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D QDY63_09820 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D QDY63_00240 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D QDY63_17070 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D QDY63_19730 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D QDY63_26265 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D QDY63_00245 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D QDY63_17065 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D QDY63_19725 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D QDY63_26260 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D QDY63_13160 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D QDY63_12845 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D QDY63_20710 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D QDY63_29105 NorM family multidrug efflux MATE transporter K26939 norM; MATE family, multidrug efflux pump
D QDY63_04455 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D QDY63_18760 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D QDY63_23005 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D QDY63_07675 MFS family transporter K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT
D QDY63_00485 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D QDY63_10140 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D QDY63_18220 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D QDY63_24810 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter
D QDY63_13145 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D QDY63_25620 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D QDY63_11455 MFS transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D QDY63_25735 MFS transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D QDY63_01530 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D QDY63_16860 MFS transporter K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D QDY63_07645 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D QDY63_10025 MFS transporter K08196 mucK; MFS transporter, AAHS family, cis,cis-muconate transporter
D QDY63_15525 aromatic acid/H+ symport family MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D QDY63_02375 CynX/NimT family MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D QDY63_08320 cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D QDY63_24070 CynX/NimT family MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D QDY63_20215 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D QDY63_06385 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D QDY63_28780 glpT; (GenBank) glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D QDY63_16795 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D QDY63_16800 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D QDY63_21060 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D QDY63_23200 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D QDY63_15395 MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D QDY63_04630 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D QDY63_14020 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D QDY63_13165 sugar transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D QDY63_10000 punC; (GenBank) purine nucleoside transporter PunC K28371 punC; MFS transporter, DHA1 family, purine nucleoside transporter
D QDY63_02860 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D QDY63_07745 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D QDY63_15490 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D QDY63_02065 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D QDY63_10340 MDR family MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D QDY63_12355 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D QDY63_18990 MDR family MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D QDY63_05625 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D QDY63_03420 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D QDY63_14180 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D QDY63_28405 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D QDY63_24675 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D QDY63_06745 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D QDY63_06780 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D QDY63_25075 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D QDY63_06775 nagE; (GenBank) N-acetylglucosamine-specific PTS transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D QDY63_06730 treP; (GenBank) PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D QDY63_25065 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D QDY63_16990 EAL domain-containing protein K02761 celB; cellobiose PTS system EIIC component
D QDY63_24665 ptsN; (GenBank) PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D QDY63_08560 aqpZ; (GenBank) aquaporin Z K06188 aqpZ; aquaporin
D QDY63_15815 aqpZ; (GenBank) aquaporin Z K06188 aqpZ; aquaporin
D QDY63_23550 aquaporin K02440 glpF; glycerol uptake facilitator
D QDY63_09360 ion transporter K10716 kch; voltage-gated potassium channel
D QDY63_19495 ammonium transporter K03320 amt; ammonium transporter, Amt family
D QDY63_29065 ammonium transporter K03320 amt; ammonium transporter, Amt family
D QDY63_09815 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_10165 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_13300 yfcF; (GenBank) glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_20265 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_22215 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_28990 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D QDY63_24845 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D QDY63_02220 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D QDY63_13535 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D QDY63_13540 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D QDY63_15155 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D QDY63_15160 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D QDY63_18240 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D QDY63_25520 mscL; (GenBank) large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D QDY63_03555 mscK; (GenBank) mechanosensitive channel MscK K05802 mscK; potassium-dependent mechanosensitive channel
D QDY63_17465 DUF3772 domain-containing protein K05802 mscK; potassium-dependent mechanosensitive channel
D QDY63_22725 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D QDY63_20380 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D QDY63_08600 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D QDY63_21855 mgtE; (GenBank) magnesium transporter K06213 mgtE; magnesium transporter
D QDY63_09365 urea transporter K08717 utp; urea transporter
D QDY63_03865 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D QDY63_09180 flagellar motor protein K02556 motA; chemotaxis protein MotA
D QDY63_03870 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D QDY63_09185 motD; (GenBank) flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D QDY63_23490 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D QDY63_00195 exbB; (GenBank) tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D QDY63_02400 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D QDY63_13055 DUF2341 domain-containing protein K03561 exbB; biopolymer transport protein ExbB
D QDY63_21655 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D QDY63_00200 exbD; (GenBank) TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D QDY63_02405 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D QDY63_13060 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D QDY63_21650 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D QDY63_22655 tolQ; (GenBank) protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D QDY63_22650 tolR; (GenBank) protein TolR K03560 tolR; biopolymer transport protein TolR
D QDY63_15785 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D QDY63_21370 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D QDY63_21110 zinc transporter ZntB K16074 zntB; zinc transporter
D QDY63_22100 transporter K16074 zntB; zinc transporter
D QDY63_18290 crcB; (GenBank) fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D QDY63_10135 bestrophin family ion channel K08994 yneE; ion channel-forming bestrophin family protein
D QDY63_15250 bestrophin family protein K08994 yneE; ion channel-forming bestrophin family protein
D QDY63_00430 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D QDY63_06840 transporter associated domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D QDY63_06740 carbohydrate porin K02024 lamB; maltoporin
D QDY63_08550 OprO/OprP family phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D QDY63_18115 OprO/OprP family phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D QDY63_21090 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D QDY63_08855 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D QDY63_13435 TonB-dependent receptor K06076 fadL; long-chain fatty acid transport protein
D QDY63_16980 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D QDY63_12305 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_14935 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_16110 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_18075 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_16265 autotransporter domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D QDY63_16270 autotransporter domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D QDY63_26940 estP; (GenBank) esterase EstP K12686 apeE; outer membrane lipase/esterase
D QDY63_24185 alginate export family protein K16081 algE; alginate production protein
D QDY63_11595 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D QDY63_24975 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D QDY63_10060 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D QDY63_25050 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D QDY63_06120 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein
D QDY63_18745 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein
D QDY63_18855 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D QDY63_25585 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16152 hasR; heme acquisition protein HasR
D QDY63_13220 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D QDY63_14300 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D QDY63_16655 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D QDY63_18975 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D QDY63_19095 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D QDY63_05575 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D QDY63_00660 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D QDY63_07845 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D QDY63_14370 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D QDY63_23070 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D QDY63_02090 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_02370 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_02730 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_02850 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_04295 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_04305 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_06165 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_09600 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_10575 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_11955 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_12770 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_12830 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_15015 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_16680 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_16840 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_17970 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_17985 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_19125 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_19155 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_23830 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_27490 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D QDY63_16275 TolC family outer membrane protein K12538 hasF; outer membrane protein, type I secretion system
D QDY63_05505 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D QDY63_00880 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system
D QDY63_18160 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system
D QDY63_03760 TolC family outer membrane protein K12340 tolC; outer membrane protein
D QDY63_17075 TolC family protein K12340 tolC; outer membrane protein
D QDY63_02020 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D QDY63_08705 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D QDY63_17475 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D QDY63_15430 TolC family protein K18300 oprN; outer membrane protein, multidrug efflux system
D QDY63_07715 adeC; (GenBank) AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_15895 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_18910 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_24265 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_02075 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system
D QDY63_19050 polysaccharide export protein K20987 pslD; polysaccharide biosynthesis/export protein PslD
D QDY63_16905 carbohydrate porin K07267 oprB; porin
D QDY63_22325 carbohydrate porin K07267 oprB; porin
D QDY63_23835 carbohydrate porin K07267 oprB; porin
D QDY63_22720 OprD family porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D QDY63_07255 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D QDY63_06645 bamB; (GenBank) outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D QDY63_08100 bamC; (GenBank) outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D QDY63_25305 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D QDY63_05105 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D QDY63_12295 autotransporter assembly complex protein TamA K07278 tamA; translocation and assembly module TamA
D QDY63_12300 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB
D QDY63_24645 lptA; (GenBank) lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D QDY63_24640 lptC; (GenBank) LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D QDY63_27015 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D QDY63_25855 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D QDY63_25830 HlyC/CorC family transporter K06189 corC; hemolysin (HlyC) family protein
D QDY63_25965 CidA/LrgA family protein K06518 cidA; holin-like protein
D QDY63_04800 amino acid permease K11734 aroP; aromatic amino acid transport protein AroP
D QDY63_22445 amino acid permease K11734 aroP; aromatic amino acid transport protein AroP
D QDY63_02830 gabP; (GenBank) GABA permease K11735 gabP; GABA permease
D QDY63_03165 amino acid permease K16234 hutT; histidine transporter
D QDY63_22515 arcD; (GenBank) arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D QDY63_22520 arcD; (GenBank) arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D QDY63_19840 eat; (GenBank) ethanolamine permease K16238 eat; ethanolamine permease
D QDY63_26015 eat; (GenBank) ethanolamine permease K16238 eat; ethanolamine permease
D QDY63_05495 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D QDY63_25745 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D QDY63_24680 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D QDY63_05515 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D QDY63_00870 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D QDY63_18150 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D QDY63_11475 efflux RND transporter permease subunit K18296 mexD; multidrug efflux pump
D QDY63_15435 efflux RND transporter permease subunit K18299 mexF; multidrug efflux pump
D QDY63_07110 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D QDY63_24315 multidrug efflux RND transporter permease subunit K21133 mexN; multidrug efflux pump
D QDY63_07720 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_15735 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_23115 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_23125 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_02460 efflux RND transporter permease subunit K21134 triC; multidrug efflux pump
D QDY63_15885 MdtB/MuxB family multidrug efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D QDY63_15890 efflux RND transporter permease subunit K07789 mdtC; multidrug efflux pump
D QDY63_03745 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D QDY63_09850 sugE; (GenBank) quaternary ammonium compound efflux SMR transporter SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D QDY63_17850 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D QDY63_02755 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D QDY63_19200 rhtA; (GenBank) threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA
D QDY63_16890 rhaT; (GenBank) L-rhamnose/proton symporter RhaT K02856 rhaT; L-rhamnose-H+ transport protein
D QDY63_14965 rarD; (GenBank) EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D QDY63_27445 rarD; (GenBank) EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D QDY63_07900 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D QDY63_16065 arnE; (GenBank) 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D QDY63_18610 Na+/H+ antiporter NhaC family protein K07084 yuiF; putative amino acid transporter
D QDY63_04895 gluconate:H+ symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D QDY63_22200 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D QDY63_05080 lactate permease LctP family transporter K03303 lutP; lactate permease
D QDY63_20500 BCCT family transporter K05020 opuD; glycine betaine transporter
D QDY63_02535 betT; (GenBank) choline transporter BetT K02168 betT; choline/glycine/proline betaine transport protein
D QDY63_27755 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D QDY63_04660 calcium:proton antiporter K07300 chaA; Ca2+:H+ antiporter
D QDY63_24775 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D QDY63_07630 inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter
D QDY63_03600 putP; (GenBank) sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D QDY63_09460 cation acetate symporter K14393 actP; cation/acetate symporter
D QDY63_01820 gltP; (GenBank) glutamate/aspartate:proton symporter GltP K11102 gltP; proton glutamate symport protein
D QDY63_13595 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D QDY63_21735 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D QDY63_18560 sstT; (GenBank) serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D QDY63_07500 nhaA; (GenBank) Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D QDY63_16395 nhaB; (GenBank) sodium/proton antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D QDY63_07185 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D QDY63_03560 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D QDY63_12650 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D QDY63_19490 monovalent cation:proton antiporter-2 (CPA2) family protein K03455 KEA1_2_3; K+:H+ antiporter
D QDY63_00685 cation:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D QDY63_22405 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D QDY63_01415 trkA; (GenBank) Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D QDY63_18700 codB; (GenBank) cytosine permease K10974 codB; cytosine permease
D QDY63_24575 uracil-xanthine permease family protein K02824 uraA; uracil permease
D QDY63_10015 nucleobase:cation symporter-2 family protein K24206 uacT; uric acid transporter
D QDY63_20325 nucleobase:cation symporter-2 family protein K24206 uacT; uric acid transporter
D QDY63_04685 nucleobase:cation symporter-2 family protein K16345 xanP; xanthine permease XanP
D QDY63_16320 nucleobase:cation symporter-2 family protein K16345 xanP; xanthine permease XanP
D QDY63_20280 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D QDY63_25565 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D QDY63_06100 serine/threonine transporter K03837 sdaC; serine transporter
D QDY63_13635 HAAAP family serine/threonine permease K03837 sdaC; serine transporter
D QDY63_04955 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D QDY63_21000 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D QDY63_10305 chrA; (GenBank) chromate efflux transporter K07240 chrA; chromate transporter
D QDY63_01490 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D QDY63_04880 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D QDY63_12665 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D QDY63_13705 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D QDY63_13710 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D QDY63_13715 dctM; (GenBank) C4-dicarboxylate TRAP transporter large permease protein DctM K11690 dctM; TRAP-type transport system large permease protein
D QDY63_01865 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D QDY63_14445 arsenic transporter K03893 arsB; arsenical pump membrane protein
D QDY63_13980 arsenic resistance protein K03325 ACR3; arsenite transporter
D QDY63_15450 arsenic resistance protein K03325 ACR3; arsenite transporter
D QDY63_12810 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D QDY63_12805 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D QDY63_12800 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D QDY63_12795 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D QDY63_12790 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D QDY63_12785 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D QDY63_25370 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D QDY63_24785 AEC family transporter K24180 mleP; malate permease and related proteins
D QDY63_23245 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D QDY63_22380 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D QDY63_11915 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D QDY63_20285 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D QDY63_28915 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein
D QDY63_13850 LysE family transporter K05835 rhtC; threonine efflux protein
D QDY63_24485 LysE family transporter K05835 rhtC; threonine efflux protein
D QDY63_14425 LysE family transporter K06600 chpE; chemosensory pili system protein ChpE
D QDY63_14465 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D QDY63_14470 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D QDY63_08000 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D QDY63_12910 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D QDY63_08005 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D QDY63_08010 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D QDY63_04360 MarC family protein K05595 marC; multiple antibiotic resistance protein
D QDY63_24375 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D QDY63_24500 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D QDY63_15420 FTR1 family protein K07243 FTR; high-affinity iron transporter
D QDY63_16730 FTR1 family protein K07243 FTR; high-affinity iron transporter
D QDY63_28890 FTR1 family protein K07243 FTR; high-affinity iron transporter
D QDY63_15405 efeO; (GenBank) iron uptake system protein EfeO K07224 efeO; iron uptake system component EfeO
D QDY63_15410 efeB; (GenBank) iron uptake transporter deferrochelatase/peroxidase subunit K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D QDY63_16720 iron transporter K07230 p19; periplasmic iron binding protein
D QDY63_25495 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D QDY63_00205 energy transducer TonB K03832 tonB; periplasmic protein TonB
D QDY63_02395 energy transducer TonB K03832 tonB; periplasmic protein TonB
D QDY63_13065 energy transducer TonB K03832 tonB; periplasmic protein TonB
D QDY63_28105 energy transducer TonB K03832 tonB; periplasmic protein TonB
D QDY63_22635 pal; (GenBank) peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D QDY63_22645 tolA; (GenBank) cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D QDY63_22640 tolB; (GenBank) Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D QDY63_28050 mdcA; (GenBank) malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D QDY63_28040 malonate decarboxylase subunit delta K13931 mdcC; malonate decarboxylase delta subunit
D QDY63_16790 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D QDY63_16785 narH; (GenBank) nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D QDY63_16775 narI; (GenBank) respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D QDY63_02070 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D QDY63_10345 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D QDY63_12350 efflux RND transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D QDY63_18995 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D QDY63_16280 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D QDY63_05510 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D QDY63_00875 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D QDY63_18155 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D QDY63_02030 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D QDY63_08695 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D QDY63_11480 efflux RND transporter periplasmic adaptor subunit K18295 mexC; membrane fusion protein, multidrug efflux system
D QDY63_15440 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system
D QDY63_07105 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D QDY63_24310 efflux RND transporter periplasmic adaptor subunit K21135 mexM; membrane fusion protein, multidrug efflux system
D QDY63_07725 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_15740 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_23110 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_23120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_02450 efflux RND transporter periplasmic adaptor subunit K21136 triA; membrane fusion protein, multidrug efflux system
D QDY63_02455 efflux RND transporter periplasmic adaptor subunit K21137 triB; membrane fusion protein, multidrug efflux system
D QDY63_15880 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D QDY63_18900 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D QDY63_24445 BON domain-containing protein K28369 dolP; outer membrane lipoprotein DolP
D QDY63_15300 pnuC; (GenBank) nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D QDY63_05430 paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA
D QDY63_05435 paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA
D QDY63_05440 MlaD family protein K06192 pqiB; intermembrane transport protein PqiB/LetB
D QDY63_03835 ABC-type transport auxiliary lipoprotein family protein K09857 pqiC; intermembrane transport lipoprotein PqiC
D QDY63_09245 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D QDY63_18890 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D QDY63_20295 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D QDY63_00890 copD; (GenBank) copper homeostasis membrane protein CopD K07245 pcoD; copper resistance protein D
D QDY63_08630 copD; (GenBank) copper homeostasis membrane protein CopD K07245 pcoD; copper resistance protein D
D QDY63_11975 copD; (GenBank) copper homeostasis membrane protein CopD K07245 pcoD; copper resistance protein D
D QDY63_00895 copC; (GenBank) copper homeostasis periplasmic binding protein CopC K07156 copC; copper resistance protein C
D QDY63_08625 copC; (GenBank) copper homeostasis periplasmic binding protein CopC K07156 copC; copper resistance protein C
D QDY63_11980 copC; (GenBank) copper homeostasis periplasmic binding protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:pbre02044]
D QDY63_03760 TolC family outer membrane protein K12340 tolC; outer membrane protein
D QDY63_17075 TolC family protein K12340 tolC; outer membrane protein
D QDY63_16285 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D QDY63_16280 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D QDY63_16275 TolC family outer membrane protein K12538 hasF; outer membrane protein, type I secretion system
D QDY63_02025 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D QDY63_08700 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D QDY63_02030 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D QDY63_08695 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D QDY63_02020 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D QDY63_08705 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D QDY63_17475 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D QDY63_12955 type II secretion system protein N K02452 gspC; general secretion pathway protein C
D QDY63_17255 pilus assembly protein PilZ K02452 gspC; general secretion pathway protein C
D QDY63_12985 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D QDY63_17250 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D QDY63_12990 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D QDY63_17245 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D QDY63_28650 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D QDY63_12995 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D QDY63_17240 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D QDY63_12965 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D QDY63_17235 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D QDY63_12950 gspH; (GenBank) type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D QDY63_17230 gspH; (GenBank) type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D QDY63_12960 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D QDY63_17225 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I
D QDY63_12945 type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J
D QDY63_17220 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D QDY63_12970 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D QDY63_17270 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D QDY63_12975 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D QDY63_17215 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D QDY63_12980 gspM; (GenBank) type II secretion system protein GspM K02462 gspM; general secretion pathway protein M
D QDY63_17205 gspN; (GenBank) type II secretion system protein N K02463 gspN; general secretion pathway protein N
D QDY63_25230 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D QDY63_25220 pilin K02650 pilA; type IV pilus assembly protein PilA
D QDY63_25225 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D QDY63_25320 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D QDY63_06620 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D QDY63_28095 pilG; (GenBank) twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D QDY63_28090 pilH; (GenBank) twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D QDY63_28085 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D QDY63_28080 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D QDY63_03365 pilM; (GenBank) type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D QDY63_03370 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D QDY63_03375 pilO; (GenBank) type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D QDY63_03380 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D QDY63_03385 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D QDY63_28145 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D QDY63_25335 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D QDY63_25330 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D QDY63_25325 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D QDY63_25340 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D QDY63_10455 FimV/HubP family polar landmark protein K08086 fimV; pilus assembly protein FimV
D QDY63_04515 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D QDY63_04560 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D QDY63_04555 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D QDY63_04550 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE
D QDY63_04545 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D QDY63_04540 type II secretion system F family protein K12510 tadB; tight adherence protein B
D QDY63_04535 type II secretion system F family protein K12511 tadC; tight adherence protein C
D QDY63_04530 tetratricopeptide repeat protein K27079 tadD; tight adherence protein D
D QDY63_04510 pilus assembly protein K12513 tadE; tight adherence protein E
D QDY63_04500 pilus assembly protein TadG-related protein K27080 tadG; tight adherence protein G
D QDY63_04565 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D QDY63_04575 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D QDY63_28160 YggT family protein K02221 yggT; YggT family protein
D QDY63_19855 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D QDY63_21660 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D QDY63_05700 sctC; (GenBank) type III secretion system outer membrane ring subunit SctC K03219 yscC; type III secretion protein C
D QDY63_05645 FHA domain-containing protein K03220 yscD; type III secretion protein D
D QDY63_05725 sctJ; (GenBank) type III secretion inner membrane ring lipoprotein SctJ K03222 yscJ; type III secretion protein J
D QDY63_05715 sctL; (GenBank) type III secretion system stator protein SctL K03223 yscL; type III secretion protein L
D QDY63_05650 FliI/YscN family ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D QDY63_05655 YscO family type III secretion system apparatus protein K04056 yscO; type III secretion protein O
D QDY63_05665 FliM/FliN family flagellar motor switch protein K03225 yscQ; type III secretion protein Q
D QDY63_05670 sctR; (GenBank) type III secretion system export apparatus subunit SctR K03226 yscR; type III secretion protein R
D QDY63_05675 sctS; (GenBank) type III secretion system export apparatus subunit SctS K03227 yscS; type III secretion protein S
D QDY63_05680 sctT; (GenBank) type III secretion system export apparatus subunit SctT K03228 yscT; type III secretion protein T
D QDY63_05685 sctU; (GenBank) type III secretion system export apparatus subunit SctU K03229 yscU; type III secretion protein U
D QDY63_05640 sctV; (GenBank) type III secretion system export apparatus subunit SctV K03230 yscV; type III secretion protein V
D QDY63_05635 sctW; (GenBank) type III secretion system gatekeeper subunit SctW K04058 yscW; type III secretion protein W
D QDY63_09140 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D QDY63_09130 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D QDY63_09210 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D QDY63_09045 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D QDY63_09055 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D QDY63_09060 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D QDY63_09105 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D QDY63_09110 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D QDY63_09115 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D QDY63_09120 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D QDY63_09125 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D QDY63_06885 dsbC; (GenBank) bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D QDY63_17805 trbB; (GenBank) P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D QDY63_17800 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D QDY63_17795 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D QDY63_17790 trbE; (GenBank) conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D QDY63_17770 trbF; (GenBank) conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D QDY63_17765 trbG; (GenBank) P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D QDY63_17760 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D QDY63_17785 trbJ; (GenBank) P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D QDY63_17775 trbL; (GenBank) P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D QDY63_16265 autotransporter domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D QDY63_16270 autotransporter domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D QDY63_26940 estP; (GenBank) esterase EstP K12686 apeE; outer membrane lipase/esterase
D QDY63_00265 tssM; (GenBank) type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D QDY63_00270 DotU family type VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D QDY63_00275 tssK; (GenBank) type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D QDY63_00350 tssG; (GenBank) type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D QDY63_00345 tssF; (GenBank) type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D QDY63_00340 tssE; (GenBank) type VI secretion system baseplate subunit TssE K11897 impF; type VI secretion system protein ImpF
D QDY63_00300 tssC; (GenBank) type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D QDY63_00295 tssB; (GenBank) type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D QDY63_00290 tssA; (GenBank) type VI secretion system protein TssA K11902 impA; type VI secretion system protein ImpA
D QDY63_00310 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D QDY63_04035 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D QDY63_00360 type VI secretion system Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D QDY63_00280 tssJ; (GenBank) type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D QDY63_00355 tssH; (GenBank) type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D QDY63_00260 tagF; (GenBank) type VI secretion system-associated protein TagF K11890 impM; type VI secretion system protein ImpM
D QDY63_00250 serine/threonine-protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D QDY63_00285 tagH; (GenBank) type VI secretion system-associated FHA domain protein TagH K11913 fha1; type VI secretion system protein
D QDY63_00255 protein phosphatase 2C domain-containing protein K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16]
D QDY63_12315 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_12340 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_13805 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_14925 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_14940 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_16105 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_16120 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_18070 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_18085 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_12305 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_14935 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_16110 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_18075 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_20105 outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D QDY63_20100 fimbria/pilus periplasmic chaperone K12519 papD; chaperone protein PapD
D QDY63_23790 molecular chaperone K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone
D QDY63_23800 CS1-pili formation C-terminal domain-containing protein K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
D QDY63_22760 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D QDY63_03010 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D QDY63_06540 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D QDY63_26790 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D QDY63_06545 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D QDY63_05190 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D QDY63_26625 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D QDY63_06850 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D QDY63_28235 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D QDY63_06535 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D QDY63_01320 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D QDY63_03250 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D QDY63_17275 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D QDY63_03245 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D QDY63_17280 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D QDY63_03240 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D QDY63_17285 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pbre02042]
D QDY63_00430 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D QDY63_06840 transporter associated domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D QDY63_28000 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pbre02022]
D QDY63_00425 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D QDY63_00420 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D QDY63_21745 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D QDY63_21750 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D QDY63_02580 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D QDY63_02575 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D QDY63_21760 ATP-binding protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D QDY63_21765 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D QDY63_22495 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D QDY63_27520 creC; (GenBank) two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D QDY63_27525 creB; (GenBank) two-component system response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D QDY63_00900 copS; (GenBank) copper resistance membrane spanning protein CopS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_05520 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_20555 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_24325 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_00905 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_05500 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_05525 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_20550 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_24320 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_19320 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D QDY63_19325 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D QDY63_09890 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D QDY63_19815 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D QDY63_09885 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D QDY63_19810 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D QDY63_08025 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D QDY63_08020 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D QDY63_13665 ATP-binding protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D QDY63_13660 winged helix-turn-helix domain-containing protein K18073 parR; two-component system, OmpR family, response regulator ParR
D QDY63_11590 histidine kinase sensor domain-containing protein K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D QDY63_12880 sensor histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3]
D QDY63_11585 response regulator transcription factor K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D QDY63_12885 response regulator transcription factor K19610 pfeR; two-component system, OmpR family, response regulator PfeR
D QDY63_15750 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D QDY63_06345 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D QDY63_12680 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D QDY63_15745 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D QDY63_18640 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D QDY63_23040 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D QDY63_16805 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D QDY63_16810 narL; (GenBank) two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D QDY63_12325 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D QDY63_12335 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D QDY63_06910 response regulator transcription factor K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D QDY63_12320 response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D QDY63_24020 response regulator transcription factor K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D QDY63_21670 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D QDY63_17510 uvrY; (GenBank) UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D QDY63_18830 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D QDY63_06900 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_16150 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_18880 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_19535 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D QDY63_16155 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D QDY63_18885 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D QDY63_19530 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D QDY63_23480 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D QDY63_04505 PAS domain-containing protein K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3]
D QDY63_04520 response regulator transcription factor K27077 pprB; two-component system, NarL family, response regulator PprB
D QDY63_28975 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D QDY63_03030 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D QDY63_03025 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D QDY63_05290 sigma-54 dependent transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D QDY63_02690 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D QDY63_22995 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D QDY63_02685 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D QDY63_23000 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D QDY63_01795 KinB sensor domain-containing domain K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3]
D QDY63_01800 algB; (GenBank) sigma-54-dependent response regulator transcription factor AlgB K11384 algB; two-component system, NtrC family, response regulator AlgB
D QDY63_17470 hydrogenase maturation protein K19640 hypX; putative two-component system protein, hydrogenase maturation factor HypX/HoxX
D QDY63_23700 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D QDY63_09170 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D QDY63_09160 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D QDY63_09175 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D QDY63_15220 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D QDY63_19430 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_21805 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_24280 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_28075 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D QDY63_28095 pilG; (GenBank) twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D QDY63_28090 pilH; (GenBank) twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D QDY63_06990 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D QDY63_07000 diguanylate cyclase K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D QDY63_06995 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D QDY63_15230 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D QDY63_09030 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D QDY63_09035 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D QDY63_23590 sensor histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D QDY63_23595 sigma-54 dependent transcriptional regulator K17061 aauR; two-component system, response regulator AauR
D QDY63_24915 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D QDY63_24910 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D QDY63_19550 response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D QDY63_09590 ATP-binding protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D QDY63_12640 PAS domain-containing protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D QDY63_09085 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D QDY63_09080 SpoIIE family protein phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D QDY63_21050 CmpA/NrtA family ABC transporter substrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor
D QDY63_21055 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D QDY63_25780 7TM diverse intracellular signaling domain-containing protein K20971 ladS; two-component system, sensor histidine kinase LadS
D QDY63_04365 response regulator K20972 retS; two-component system, sensor histidine kinase RetS
C 02035 Bacterial motility proteins [BR:pbre02035]
D QDY63_09170 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D QDY63_09195 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D QDY63_09200 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D QDY63_15215 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D QDY63_21800 cheR; (GenBank) protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D QDY63_09175 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D QDY63_15220 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D QDY63_09160 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D QDY63_09165 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D QDY63_19430 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_21805 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_24280 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D QDY63_01160 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_01970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_03225 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_03230 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_03570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_04420 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_04915 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_05545 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_09570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_09670 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_12740 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_15305 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_15485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_16315 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_16740 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_18605 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_18615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_22055 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_22235 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_22775 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_23085 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_25095 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_26510 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_29095 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D QDY63_20790 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D QDY63_20930 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D QDY63_24295 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D QDY63_09055 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D QDY63_09060 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D QDY63_09065 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D QDY63_09110 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D QDY63_09115 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D QDY63_09120 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D QDY63_09125 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D QDY63_09140 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D QDY63_09130 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D QDY63_09050 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D QDY63_09100 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D QDY63_09105 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D QDY63_09045 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D QDY63_08975 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D QDY63_21810 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D QDY63_08970 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D QDY63_09095 fliL; (GenBank) flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D QDY63_28770 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D QDY63_09040 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D QDY63_09090 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D QDY63_00935 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D QDY63_21795 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D QDY63_21790 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D QDY63_21785 flgD; (GenBank) flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D QDY63_08960 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D QDY63_08965 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D QDY63_08980 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D QDY63_21780 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D QDY63_08985 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D QDY63_08990 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D QDY63_21820 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D QDY63_23490 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D QDY63_09000 flagellin K02406 fliC; flagellin
D QDY63_09010 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D QDY63_09015 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D QDY63_09020 fliT; (GenBank) flagellar protein FliT K02423 fliT; flagellar protein FliT
D QDY63_09155 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D QDY63_03865 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D QDY63_09180 flagellar motor protein K02556 motA; chemotaxis protein MotA
D QDY63_03870 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D QDY63_09185 motD; (GenBank) flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D QDY63_09025 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D QDY63_09030 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D QDY63_09035 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D QDY63_02520 tcyJ; (GenBank) cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D QDY63_28470 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D QDY63_21815 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D QDY63_09005 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D QDY63_09145 flhF; (GenBank) flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D QDY63_09150 fleN; (GenBank) flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D QDY63_28095 pilG; (GenBank) twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D QDY63_28090 pilH; (GenBank) twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D QDY63_28085 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D QDY63_28080 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D QDY63_28075 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D QDY63_28145 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D QDY63_28070 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D QDY63_14430 AraC family transcriptional regulator K06599 chpD; AraC family transcriptional regulator, chemosensory pili system protein ChpD
D QDY63_14425 LysE family transporter K06600 chpE; chemosensory pili system protein ChpE
D QDY63_25220 pilin K02650 pilA; type IV pilus assembly protein PilA
D QDY63_25225 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D QDY63_25230 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D QDY63_06620 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D QDY63_03385 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D QDY63_03380 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D QDY63_03375 pilO; (GenBank) type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D QDY63_03370 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D QDY63_03365 pilM; (GenBank) type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D QDY63_25335 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D QDY63_25330 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D QDY63_25325 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D QDY63_25320 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D QDY63_04565 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D QDY63_04575 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D QDY63_04515 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D QDY63_04560 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D QDY63_04555 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D QDY63_04550 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE
D QDY63_04545 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D QDY63_12315 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_12340 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_13805 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_14925 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_14940 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_16105 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_16120 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_18070 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_18085 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D QDY63_12305 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_14935 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_16110 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_18075 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D QDY63_16190 fimA; (GenBank) type 1 fimbrial major subunit FimA K07352 sfmA; type 1 fimbrial protein
D QDY63_16185 fimbria/pilus periplasmic chaperone K07353 sfmC; fimbrial chaperone protein
D QDY63_16180 fimbrial biogenesis usher protein K07354 sfmD; outer membrane usher protein
D QDY63_16170 fimbrial protein K07355 sfmF; fimbrial-like protein
D QDY63_16175 fimbrial protein K07356 sfmH; fimbrial protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pbre04812]
D QDY63_24750 mreB; (GenBank) rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D QDY63_24345 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D QDY63_24350 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D QDY63_20350 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D QDY63_20355 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D QDY63_20360 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D QDY63_01300 ParA family protein K03496 parA; chromosome partitioning protein
D QDY63_03540 ParA family protein K03496 parA; chromosome partitioning protein
D QDY63_09190 ParA family protein K03496 parA; chromosome partitioning protein
D QDY63_17885 parA; (GenBank) ParA family partition ATPase K03496 parA; chromosome partitioning protein
D QDY63_01295 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D QDY63_17925 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pbre04147]
D QDY63_09540 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D QDY63_07315 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D QDY63_20600 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D QDY63_23055 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D QDY63_27865 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D QDY63_09375 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D QDY63_22975 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D QDY63_08570 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D QDY63_27685 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D QDY63_23505 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D QDY63_23165 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D QDY63_05125 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D QDY63_05265 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D QDY63_21300 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D QDY63_06700 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D QDY63_26735 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D QDY63_26900 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D QDY63_13160 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D QDY63_09620 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_13460 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22265 fadD1; (GenBank) long-chain-fatty-acid--CoA ligase FadD1 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_22270 fadD2; (GenBank) long-chain-fatty-acid--CoA ligase FadD2 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D QDY63_04600 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_12400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_13455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_15265 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_21385 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D QDY63_27935 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D QDY63_07065 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D QDY63_20890 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D QDY63_28985 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D QDY63_23485 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D QDY63_12000 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D QDY63_06045 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D QDY63_03070 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D QDY63_15960 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D QDY63_13215 FGGY-family carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D QDY63_14325 FGGY family carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D QDY63_23555 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D QDY63_03035 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_08380 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_12465 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_18775 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28560 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_28570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D QDY63_12380 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D QDY63_28875 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D QDY63_14960 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D QDY63_08945 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D QDY63_28460 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D QDY63_04380 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D QDY63_09500 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_12585 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D QDY63_08235 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D QDY63_21455 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D QDY63_16405 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D QDY63_22310 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D QDY63_05185 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D QDY63_03090 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:pbre02048]
D QDY63_26525 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D QDY63_26530 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D QDY63_26535 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D QDY63_26110 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D QDY63_02785 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D QDY63_10775 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D QDY63_25130 site-specific DNA-methyltransferase K00590 E2.1.1.113; site-specific DNA-methyltransferase (cytosine-N4-specific) [EC:2.1.1.113]
D QDY63_26115 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D QDY63_08135 HNH endonuclease signature motif containing protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D QDY63_17935 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D QDY63_00600 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D QDY63_06300 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D QDY63_15600 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D QDY63_22180 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D QDY63_21220 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D QDY63_21225 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D QDY63_24080 type II toxin-antitoxin system MqsR family toxin K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D QDY63_24085 type II toxin-antitoxin system MqsA family antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D QDY63_22015 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D QDY63_22020 vapB; (GenBank) type II toxin-antitoxin system VapB family antitoxin K18829 mvpT; antitoxin VapB
D QDY63_24345 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D QDY63_24750 mreB; (GenBank) rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D QDY63_03830 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D QDY63_03815 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D QDY63_10350 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D QDY63_08045 hypothetical protein K19168 cptA; toxin CptA
D QDY63_08040 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D QDY63_06575 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D QDY63_19230 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pbre01504]
D QDY63_10240 aminoglycoside phosphotransferase family protein K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D QDY63_15395 MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D QDY63_13665 ATP-binding protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D QDY63_13660 winged helix-turn-helix domain-containing protein K18073 parR; two-component system, OmpR family, response regulator ParR
D QDY63_00900 copS; (GenBank) copper resistance membrane spanning protein CopS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_05520 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_20555 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_24325 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D QDY63_00905 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_05500 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_05525 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_20550 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_24320 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D QDY63_08310 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D QDY63_15605 LysR substrate-binding domain-containing protein K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
D QDY63_22720 OprD family porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D QDY63_23230 mprF; (GenBank) bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D QDY63_21745 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D QDY63_21750 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D QDY63_07725 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_15740 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_23110 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_23120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D QDY63_07720 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_15735 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_23115 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_23125 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D QDY63_07715 adeC; (GenBank) AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_15895 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_18910 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_24265 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D QDY63_11485 helix-turn-helix domain-containing protein K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D QDY63_11480 efflux RND transporter periplasmic adaptor subunit K18295 mexC; membrane fusion protein, multidrug efflux system
D QDY63_11475 efflux RND transporter permease subunit K18296 mexD; multidrug efflux pump
D QDY63_15440 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system
D QDY63_15435 efflux RND transporter permease subunit K18299 mexF; multidrug efflux pump
D QDY63_15430 TolC family protein K18300 oprN; outer membrane protein, multidrug efflux system
D QDY63_07100 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D QDY63_07105 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D QDY63_07110 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D QDY63_04610 cueR; (GenBank) Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D QDY63_03760 TolC family outer membrane protein K12340 tolC; outer membrane protein
D QDY63_17075 TolC family protein K12340 tolC; outer membrane protein
D QDY63_16155 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D QDY63_18885 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D QDY63_19530 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D QDY63_23480 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pbre00537]
D QDY63_27685 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:pbre03200]
D QDY63_27235 lysis system i-spanin subunit Rz K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pbre03100]
D QDY63_01950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_04715 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_05415 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_06430 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_10355 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_10365 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_19185 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_26840 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D QDY63_02245 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D QDY63_12035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D QDY63_21835 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D QDY63_21860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D QDY63_21865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D QDY63_10050 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D QDY63_25285 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D QDY63_09870 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D QDY63_09880 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D QDY63_10515 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D QDY63_10520 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D QDY63_13760 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D QDY63_05765 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D QDY63_09685 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D QDY63_09695 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D QDY63_10360 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D QDY63_10370 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D QDY63_07955 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D QDY63_09690 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D QDY63_09700 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D QDY63_17495 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D QDY63_26805 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D QDY63_12040 tRNA-His K14226 tRNA-His; tRNA His
D QDY63_12050 tRNA-His K14226 tRNA-His; tRNA His
D QDY63_01945 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_04710 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_05410 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_06425 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_19190 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_26845 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D QDY63_03970 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_03975 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_05195 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_06520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_12045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_13990 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D QDY63_22615 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D QDY63_25275 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D QDY63_05200 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_05610 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_10940 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_23220 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_23225 tRNA-Met K14230 tRNA-Met; tRNA Met
D QDY63_27110 tRNA-Ile K14230 tRNA-Met; tRNA Met
D QDY63_02925 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D QDY63_10735 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D QDY63_25270 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D QDY63_25280 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D QDY63_08115 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D QDY63_18235 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D QDY63_21355 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D QDY63_21870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D QDY63_02795 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D QDY63_25210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D QDY63_26800 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D QDY63_26795 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D QDY63_26810 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D QDY63_09865 tRNA-Val K14237 tRNA-Val; tRNA Val
D QDY63_09875 tRNA-Val K14237 tRNA-Val; tRNA Val
D QDY63_10510 tRNA-Val K14237 tRNA-Val; tRNA Val
D QDY63_10530 tRNA-Val K14237 tRNA-Val; tRNA Val
D QDY63_01940 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_04705 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_05405 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_06420 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_19195 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_26850 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D QDY63_01955 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_04720 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_05420 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_06435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_19180 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_26835 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D QDY63_01960 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_01965 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_04725 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_05425 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_06440 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_19175 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_26830 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D QDY63_24420 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D QDY63_05065 ssrA; (GenBank) transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D QDY63_28730 ssrS; (GenBank) 6S RNA K28358 ssrS; RNA polymerase binding 6S RNA
D QDY63_20945 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D QDY63_27715 L-carnitine dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D QDY63_18870 dkgB; (GenBank) 2,5-didehydrogluconate reductase DkgB K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D QDY63_26960 iron-containing alcohol dehydrogenase K19954 adh1; alcohol dehydrogenase [EC:1.1.1.-]
D QDY63_11775 alcohol dehydrogenase catalytic domain-containing protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D QDY63_17675 alcohol dehydrogenase catalytic domain-containing protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D QDY63_15375 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D QDY63_17150 PQQ-dependent dehydrogenase, methanol/ethanol family K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1]
D QDY63_14170 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D QDY63_28270 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D QDY63_12125 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D QDY63_20905 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D QDY63_27340 pqqC; (GenBank) pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D QDY63_21620 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D QDY63_21615 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D QDY63_21465 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D QDY63_05865 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D QDY63_01475 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D QDY63_28775 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D QDY63_04870 NAD(P)H-dependent oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D QDY63_08590 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D QDY63_15330 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D QDY63_17450 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D QDY63_14900 ahpF; (GenBank) alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D QDY63_03620 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D QDY63_19565 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D QDY63_07420 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D QDY63_12370 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D QDY63_18270 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D QDY63_05395 msrP; (GenBank) protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D QDY63_12135 cytochrome b K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D QDY63_05945 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D QDY63_23690 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D QDY63_08085 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D QDY63_15875 tpx; (GenBank) thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D QDY63_28610 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D QDY63_14895 ahpC; (GenBank) alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D QDY63_01570 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D QDY63_19645 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D QDY63_15540 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D QDY63_17045 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D QDY63_11940 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D QDY63_15630 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D QDY63_17405 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D QDY63_02355 TauD/TfdA family dioxygenase K22303 atsK; alkyl sulfatase [EC:1.14.11.77]
D QDY63_25045 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D QDY63_06210 hmpA; (GenBank) NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D QDY63_18895 SidA/IucD/PvdA family monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D QDY63_11535 acyl-CoA dehydrogenase family protein K22027 iacA; indole-3-acetate monooxygenase [EC:1.14.13.235]
D QDY63_02490 LLM class flavin-dependent oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D QDY63_23275 fpr; (GenBank) ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D QDY63_25525 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D QDY63_21695 arsC; (GenBank) arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D QDY63_24005 glutaredoxin family protein K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D QDY63_14440 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D QDY63_27350 pqqE; (GenBank) pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D QDY63_16745 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D QDY63_07360 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D QDY63_00780 cfaB; (GenBank) C17 cyclopropane fatty acid synthase CfaB K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D QDY63_14005 methyltransferase domain-containing protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D QDY63_26295 tam; (GenBank) trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D QDY63_03695 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D QDY63_28020 mdcH; (GenBank) malonate decarboxylase subunit epsilon K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39]
D QDY63_17030 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D QDY63_08535 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D QDY63_25835 lnt; (GenBank) apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D QDY63_07760 lysophospholipid acyltransferase family protein K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D QDY63_27710 3-keto-5-aminohexanoate cleavage protein K27837 cdhC; 3-dehydrocarnitine:acetyl-CoA trimethylamine transferase [EC:2.3.1.317]
D QDY63_01135 acetyltransferase K03826 yiaB_C; [protein]-L-lysine N-acetyltransferase [EC:2.3.1.338]
D QDY63_10115 N-acetyltransferase K03826 yiaB_C; [protein]-L-lysine N-acetyltransferase [EC:2.3.1.338]
D QDY63_22830 acetyltransferase K03826 yiaB_C; [protein]-L-lysine N-acetyltransferase [EC:2.3.1.338]
D QDY63_23255 GNAT family N-acetyltransferase K03826 yiaB_C; [protein]-L-lysine N-acetyltransferase [EC:2.3.1.338]
D QDY63_04240 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D QDY63_18310 aat; (GenBank) leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D QDY63_18315 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D QDY63_07765 olsB; (GenBank) L-ornithine N(alpha)-acyltransferase K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D QDY63_28045 triphosphoribosyl-dephospho-CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D QDY63_08690 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D QDY63_23295 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D QDY63_28395 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D QDY63_20590 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D QDY63_21130 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D QDY63_20125 pap; (GenBank) polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D QDY63_03640 glnE; (GenBank) bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D QDY63_11165 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D QDY63_23160 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D QDY63_28025 malonate decarboxylase holo-ACP synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D QDY63_03550 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D QDY63_08525 aceK; (GenBank) bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D QDY63_06925 CaiB/BaiF CoA-transferase family protein K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D QDY63_23620 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D QDY63_03305 phaZ; (GenBank) poly(3-hydroxyalkanoate) depolymerase K22250 phaZ; poly(3-hydroxyoctanoate) depolymerase [EC:3.1.1.76]
D QDY63_11600 alpha/beta hydrolase-fold protein K23722 pfeE; iron(III)-enterobactin esterase [EC:3.1.1.108]
D QDY63_27720 thioesterase family protein K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33]
D QDY63_02635 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D QDY63_03490 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D QDY63_10385 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D QDY63_22475 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D QDY63_09615 sixA; (GenBank) phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D QDY63_14920 EAL domain-containing protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D QDY63_01500 betC; (GenBank) choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D QDY63_10620 endonuclease I family protein K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D QDY63_19775 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D QDY63_21520 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D QDY63_25085 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D QDY63_14825 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D QDY63_27230 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D QDY63_04905 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D QDY63_01430 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D QDY63_22245 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D QDY63_07415 penicillin acylase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D QDY63_15290 acylase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D QDY63_10020 alpha/beta fold hydrolase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101]
D QDY63_23880 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D QDY63_24720 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D QDY63_04665 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D QDY63_21580 Maf family protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D QDY63_13555 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D QDY63_15175 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D QDY63_22955 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D QDY63_02410 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D QDY63_28035 biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D QDY63_28030 mdcE; (GenBank) biotin-independent malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D QDY63_03900 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D QDY63_07170 cysteine desulfurase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D QDY63_16885 rhaM; (GenBank) L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D QDY63_12525 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D QDY63_25995 mpl; (GenBank) UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D QDY63_14660 hypothetical protein K26441 lig; DNA ligase [EC:6.5.1.1]
D QDY63_23455 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D QDY63_23450 rsxB; (GenBank) electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D QDY63_23465 Rnf-Nqr domain containing protein K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D QDY63_20860 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D QDY63_28380 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D QDY63_14415 mgtA; (GenBank) magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D QDY63_05320 sfsA; (GenBank) DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D QDY63_02650 fdhD; (GenBank) formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D QDY63_23430 ferredoxin family protein K05524 fdxA; ferredoxin
D QDY63_23460 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D QDY63_23445 Rnf-Nqr domain containing protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D QDY63_06580 iscU; (GenBank) Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D QDY63_14200 VWA domain-containing protein K02448 norD; nitric oxide reductase NorD protein
D QDY63_16915 cytochrome c oxidase subunit 3 K02164 norE; nitric oxide reductase NorE protein
D QDY63_16920 CbbQ/NirQ/NorQ/GpvN family protein K04748 norQ; nitric oxide reductase NorQ protein
D QDY63_08230 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D QDY63_21460 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D QDY63_16935 cytochrome c K19344 nirC; cytochrome c55X
D QDY63_16940 cytochrome D1 domain-containing protein K19345 nirF; protein NirF
D QDY63_01555 dodecin family protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D QDY63_25775 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D QDY63_05950 cysZ; (GenBank) sulfate transporter CysZ K06203 cysZ; CysZ protein
D QDY63_14335 eutH; (GenBank) ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter
D QDY63_28150 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D QDY63_24180 algK; (GenBank) alginate biosynthesis TPR repeat lipoprotein AlgK K19292 algK; alginate biosynthesis protein AlgK
C 99987 Cofactor metabolism
D QDY63_16490 cobW; (GenBank) cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D QDY63_28955 heme biosynthesis protein HemY K02498 hemY; HemY protein
D QDY63_16965 nirJ; (GenBank) heme d1 biosynthesis radical SAM protein NirJ K24868 nirJ; heme d1 biosynthesis protein
D QDY63_03265 ubiB; (GenBank) ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D QDY63_03270 SCP2 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D QDY63_29075 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D QDY63_16475 VWA domain-containing protein K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
D QDY63_16565 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D QDY63_07530 DoxX family protein K15977 K15977; putative oxidoreductase
D QDY63_19765 DoxX family protein K15977 K15977; putative oxidoreductase
D QDY63_24110 alpha/beta fold hydrolase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D QDY63_07135 cold-shock protein K03704 cspA; cold shock protein
D QDY63_07375 cold-shock protein K03704 cspA; cold shock protein
D QDY63_09135 cold-shock protein K03704 cspA; cold shock protein
D QDY63_10685 cold-shock protein K03704 cspA; cold shock protein
D QDY63_18335 cspD; (GenBank) cold shock domain-containing protein CspD K03704 cspA; cold shock protein
D QDY63_22575 cold-shock protein K03704 cspA; cold shock protein
D QDY63_22705 cold-shock protein K03704 cspA; cold shock protein
D QDY63_28945 Rsd/AlgQ family anti-sigma factor K07740 rsd; regulator of sigma D
D QDY63_29070 glnK; (GenBank) P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D QDY63_02570 Tex family protein K06959 tex; protein Tex
C 99974 Translation
D QDY63_28755 rbbA; (GenBank) ribosome-associated ATPase/putative transporter RbbA K13926 rbbA; ribosome-dependent ATPase
C 99975 Protein processing
D QDY63_21685 META domain-containing protein K03668 hslJ; heat shock protein HslJ
D QDY63_18330 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D QDY63_12055 tig; (GenBank) trigger factor K03545 tig; trigger factor
D QDY63_05400 msrQ; (GenBank) protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D QDY63_04160 ureE; (GenBank) urease accessory protein UreE K03187 ureE; urease accessory protein
D QDY63_04155 urease accessory UreF family protein K03188 ureF; urease accessory protein
D QDY63_04150 ureG; (GenBank) urease accessory protein UreG K03189 ureG; urease accessory protein
D QDY63_04250 urease accessory protein UreD K03190 ureD; urease accessory protein
D QDY63_04145 HupE/UreJ family protein K03192 ureJ; urease accessory protein
D QDY63_05090 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D QDY63_29080 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D QDY63_28480 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D QDY63_20045 DsbA family protein K07396 K07396; putative protein-disulfide isomerase
D QDY63_26910 OsmC family protein K07397 yhfA; putative redox protein
D QDY63_16515 nfuA; (GenBank) Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
D QDY63_08915 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein
D QDY63_20985 xdhC; (GenBank) xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D QDY63_21610 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D QDY63_19115 glutathione S-transferase K11208 yncG; GST-like protein
C 99976 Replication and repair
D QDY63_23195 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D QDY63_00105 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D QDY63_08880 rmuC; (GenBank) DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D QDY63_17945 AAA family ATPase K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D QDY63_24435 YraN family protein K07460 yraN; putative endonuclease
D QDY63_24010 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D QDY63_18295 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D QDY63_08155 recombinase family protein K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D QDY63_01105 transposase K07483 K07483; transposase
D QDY63_22860 transposase K07483 K07483; transposase
D QDY63_01080 IS66 family transposase K07484 K07484; transposase
D QDY63_01085 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D QDY63_01110 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D QDY63_01150 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D QDY63_01155 IS66 family transposase K07484 K07484; transposase
D QDY63_15710 IS66 family transposase K07484 K07484; transposase
D QDY63_15715 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D QDY63_18195 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D QDY63_18200 IS66 family transposase K07484 K07484; transposase
D QDY63_19935 IS66 family transposase K07484 K07484; transposase
D QDY63_19940 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D QDY63_20765 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D QDY63_20770 IS66 family transposase K07484 K07484; transposase
D QDY63_22855 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D QDY63_22880 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D QDY63_22885 IS66 family transposase K07484 K07484; transposase
D QDY63_25020 IS66 family transposase K07484 K07484; transposase
D QDY63_25025 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D QDY63_26500 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D QDY63_26505 IS66 family transposase K07484 K07484; transposase
D QDY63_22895 IS3-like element ISPsy29 family transposase K07497 K07497; putative transposase
D QDY63_25165 IS3-like element ISPsy29 family transposase K07497 K07497; putative transposase
D QDY63_26410 IS3-like element ISPsy29 family transposase K07497 K07497; putative transposase
D QDY63_04965 site-specific integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D QDY63_20910 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D QDY63_27925 formate/nitrite transporter family protein K21990 yfdC; formate-nitrite transporter family protein
D QDY63_04855 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D QDY63_23730 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D QDY63_01875 CitMHS family transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D QDY63_15915 citrate:proton symporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D QDY63_22105 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D QDY63_08675 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D QDY63_00530 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D QDY63_09515 brnQ; (GenBank) branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D QDY63_09855 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D QDY63_03130 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D QDY63_12005 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D QDY63_21240 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D QDY63_27610 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D QDY63_19905 O-antigen translocase K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D QDY63_22480 septation protein A K06190 ispZ; intracellular septation protein
D QDY63_12645 hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB
D QDY63_27060 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D QDY63_02990 murein hydrolase activator EnvC K22719 envC; murein hydrolase activator
C 99993 Cell motility
D QDY63_28905 lpoB; (GenBank) penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
D QDY63_02015 retention module-containing protein K12549 lapA; surface adhesion protein
D QDY63_12310 molecular chaperone K15540 ecpD; chaperone protein EcpD
D QDY63_14930 fimbria/pilus periplasmic chaperone K15540 ecpD; chaperone protein EcpD
D QDY63_14945 molecular chaperone K15540 ecpD; chaperone protein EcpD
D QDY63_16115 molecular chaperone K15540 ecpD; chaperone protein EcpD
D QDY63_18080 fimbria/pilus periplasmic chaperone K15540 ecpD; chaperone protein EcpD
C 99995 Signaling proteins
D QDY63_25100 ampE; (GenBank) regulatory signaling modulator protein AmpE K03807 ampE; AmpE protein
D QDY63_20680 universal stress protein K06149 uspA; universal stress protein A
D QDY63_13650 universal stress protein K14055 uspE; universal stress protein E
D QDY63_03045 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D QDY63_16040 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D QDY63_25820 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D QDY63_24150 PhoH family protein K07175 phoH2; PhoH-like ATPase
D QDY63_27050 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D QDY63_27470 putative nucleotidyltransferase substrate binding domain-containing protein K07182 K07182; CBS domain-containing protein
D QDY63_15240 ATPase domain-containing protein K08482 kaiC; circadian clock protein KaiC
D QDY63_22730 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D QDY63_18300 lolA; (GenBank) outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D QDY63_05775 lolB; (GenBank) lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB
D QDY63_06340 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D QDY63_09430 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D QDY63_20525 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D QDY63_07495 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D QDY63_07260 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D QDY63_07365 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D QDY63_26275 OmpW family outer membrane protein K07275 ompW; outer membrane protein
D QDY63_24540 YajG family lipoprotein K07286 yajG; uncharacterized lipoprotein
D QDY63_02940 AsmA family protein K07289 asmA; AsmA protein
D QDY63_04180 AsmA family protein K07290 yhjG; AsmA family protein
D QDY63_28660 NfeD family protein K07340 ybbJ; inner membrane protein
D QDY63_28750 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D QDY63_17080 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D QDY63_27515 creD; (GenBank) cell envelope integrity protein CreD K06143 creD; inner membrane protein
D QDY63_09240 ccmE; (GenBank) cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D QDY63_09255 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D QDY63_09260 ccmI; (GenBank) c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D QDY63_06625 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
D QDY63_17380 DUF1656 domain-containing protein K21695 aaeX; protein AaeX
C 99994 Others
D QDY63_00460 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D QDY63_23510 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D QDY63_03195 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D QDY63_09310 phnK; (GenBank) phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D QDY63_27035 apaG; (GenBank) Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D QDY63_29020 cyaY; (GenBank) iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D QDY63_13730 nitrous oxide reductase family maturation protein NosD K07218 nosD; nitrous oxidase accessory protein
D QDY63_22400 imelysin family protein K07231 K07231; putative iron-regulated protein
D QDY63_00955 copper resistance protein B K07233 pcoB; copper resistance protein B
D QDY63_08620 copper resistance protein B K07233 pcoB; copper resistance protein B
D QDY63_14215 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D QDY63_13745 nitrous oxide reductase accessory protein NosL K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D QDY63_23600 GlpM family protein K02442 glpM; membrane protein GlpM
D QDY63_10490 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D QDY63_11110 glycoside hydrolase family 19 protein K03791 K03791; putative chitinase
D QDY63_11425 glycoside hydrolase family 19 protein K03791 K03791; putative chitinase
D QDY63_23330 glycoside hydrolase family 19 protein K03791 K03791; putative chitinase
D QDY63_27820 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D QDY63_18795 pqqA; (GenBank) pyrroloquinoline quinone precursor peptide PqqA K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A
D QDY63_27330 pqqA; (GenBank) pyrroloquinoline quinone precursor peptide PqqA K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A
D QDY63_27335 pqqB; (GenBank) pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D QDY63_27345 pqqD; (GenBank) pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D QDY63_08910 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D QDY63_17860 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D QDY63_19805 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D QDY63_20340 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D QDY63_26870 erpA; (GenBank) iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D QDY63_22250 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D QDY63_23175 fxsA; (GenBank) membrane protein FxsA K07113 fxsA; UPF0716 protein FxsA
D QDY63_07165 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D QDY63_20050 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D QDY63_18365 hflD; (GenBank) high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D QDY63_19260 VOC family protein K04750 phnB; PhnB protein
D QDY63_14435 arsH; (GenBank) arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D QDY63_07820 LemA family protein K03744 lemA; LemA protein
D QDY63_22710 SlyX family protein K03745 slyX; SlyX protein
D QDY63_25380 CreA family protein K05805 creA; CreA protein
D QDY63_21725 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein
D QDY63_10485 SPOR domain-containing protein K03749 dedD; DedD protein
D QDY63_03400 SPOR domain-containing protein K03112 damX; DamX protein
D QDY63_26035 DedA family protein K03975 dedA; membrane-associated protein
D QDY63_07515 hypothetical protein K08985 K08985; putative lipoprotein
D QDY63_07830 TPM domain-containing protein K08988 K08988; putative membrane protein
D QDY63_07450 DUF1145 domain-containing protein K08993 yhhL; putative membrane protein
D QDY63_07915 DUF4142 domain-containing protein K08995 K08995; putative membrane protein
D QDY63_07435 YchJ family protein K09858 K09858; SEC-C motif domain protein
D QDY63_07125 YbaY family lipoprotein K09914 K09914; putative lipoprotein
D QDY63_06090 phosphate-starvation-inducible PsiE family protein K13256 psiE; protein PsiE
D QDY63_25410 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA
C 99997 Function unknown
D QDY63_02385 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D QDY63_20190 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D QDY63_25510 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D QDY63_07825 TPM domain-containing protein K06872 K06872; uncharacterized protein
D QDY63_13345 TPM domain-containing protein K06872 K06872; uncharacterized protein
D QDY63_07030 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D QDY63_16710 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D QDY63_20225 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D QDY63_23400 phage baseplate protein K06903 W; Bacteriophage baseplate protein W
D QDY63_23335 contractile injection system protein, VgrG/Pvc8 family K06905 D; Bacteriophage probable baseplate hub protein
D QDY63_23345 phage tail protein K06906 gpU; phage tail protein
D QDY63_23365 phage tail protein K06907 FI; Bacteriophage tail sheath protein
D QDY63_19545 ATP-binding protein K06923 K06923; uncharacterized protein
D QDY63_00965 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D QDY63_06820 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D QDY63_13645 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D QDY63_14140 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D QDY63_22455 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D QDY63_29015 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D QDY63_00050 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D QDY63_03050 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D QDY63_05815 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D QDY63_07600 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D QDY63_21425 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D QDY63_25310 PP0621 family protein K06950 K06950; uncharacterized protein
D QDY63_05830 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D QDY63_28325 L-cystine transporter K06956 K06956; uncharacterized protein
D QDY63_19700 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D QDY63_04920 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D QDY63_20495 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D QDY63_07395 M14 family metallopeptidase K06987 K06987; uncharacterized protein
D QDY63_21955 M14 family metallopeptidase K06987 K06987; uncharacterized protein
D QDY63_16370 C39 family peptidase K06992 K06992; uncharacterized protein
D QDY63_00085 cupin domain-containing protein K06995 K06995; uncharacterized protein
D QDY63_04785 cupin domain-containing protein K06995 K06995; uncharacterized protein
D QDY63_11640 cupin domain-containing protein K06995 K06995; uncharacterized protein
D QDY63_15655 cupin domain-containing protein K06995 K06995; uncharacterized protein
D QDY63_03810 YqiA/YcfP family alpha/beta fold hydrolase K07000 K07000; uncharacterized protein
D QDY63_13480 RND family transporter K07003 K07003; uncharacterized protein
D QDY63_22185 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D QDY63_24900 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein
D QDY63_28255 hydrolase K07019 K07019; uncharacterized protein
D QDY63_20795 alpha/beta hydrolase K07020 K07020; uncharacterized protein
D QDY63_05355 AAA family ATPase K07028 K07028; uncharacterized protein
D QDY63_08895 YecA family protein K07039 K07039; uncharacterized protein
D QDY63_14100 UPF0149 family protein K07039 K07039; uncharacterized protein
D QDY63_13400 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D QDY63_25635 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D QDY63_01605 YheV family putative zinc ribbon protein K07070 K07070; uncharacterized protein
D QDY63_05870 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D QDY63_18630 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D QDY63_12360 permease K07089 K07089; uncharacterized protein
D QDY63_04865 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D QDY63_06690 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D QDY63_10255 TSUP family transporter K07090 K07090; uncharacterized protein
D QDY63_12625 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D QDY63_14120 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D QDY63_15765 TSUP family transporter K07090 K07090; uncharacterized protein
D QDY63_19625 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D QDY63_17265 PhoX family phosphatase K07093 K07093; uncharacterized protein
D QDY63_08325 NAD(P)-dependent oxidoreductase K07118 K07118; uncharacterized protein
D QDY63_07995 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D QDY63_24430 penicillin-binding protein activator K07121 K07121; uncharacterized protein
D QDY63_10210 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D QDY63_26895 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D QDY63_25040 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D QDY63_25805 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D QDY63_07510 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D QDY63_19425 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D QDY63_06945 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D QDY63_25955 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D QDY63_01325 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D QDY63_25890 DUF493 domain-containing protein K09158 K09158; uncharacterized protein
D QDY63_08410 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D QDY63_22485 YciI family protein K09780 K09780; uncharacterized protein
D QDY63_09415 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D QDY63_27055 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D QDY63_08890 YbaN family protein K09790 K09790; uncharacterized protein
D QDY63_23080 YbaN family protein K09790 K09790; uncharacterized protein
D QDY63_21640 Trm112 family protein K09791 K09791; uncharacterized protein
D QDY63_20870 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D QDY63_02980 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D QDY63_05100 RnfH family protein K09801 K09801; uncharacterized protein
D QDY63_08650 S1-like domain-containing RNA-binding protein K00243 K00243; uncharacterized protein
D QDY63_28895 hypothetical protein K09859 K09859; uncharacterized protein
D QDY63_24160 yaaA; (GenBank) peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D QDY63_25240 yacG; (GenBank) DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D QDY63_28715 YecA family protein K09895 K09895; uncharacterized protein
D QDY63_20155 YheU family protein K09898 K09898; uncharacterized protein
D QDY63_08395 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D QDY63_24905 DUF1043 family protein K09908 K09908; uncharacterized protein
D QDY63_08735 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein
D QDY63_18570 DUF480 domain-containing protein K09915 K09915; uncharacterized protein
D QDY63_16450 DUF1315 family protein K09916 K09916; uncharacterized protein
D QDY63_06075 YebG family protein K09918 K09918; uncharacterized protein
D QDY63_08555 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D QDY63_03785 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein
D QDY63_29040 DUF484 family protein K09921 K09921; uncharacterized protein
D QDY63_21005 YggL family protein K09923 K09923; uncharacterized protein
D QDY63_20060 DUF2059 domain-containing protein K09924 K09924; uncharacterized protein
D QDY63_20855 FixH family protein K09926 K09926; uncharacterized protein
D QDY63_19610 winged helix-turn-helix domain-containing protein K09927 K09927; uncharacterized protein
D QDY63_21665 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D QDY63_00790 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D QDY63_07540 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D QDY63_05980 antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein
D QDY63_08760 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein
D QDY63_00145 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein
D QDY63_13385 hypothetical protein K09943 K09943; uncharacterized protein
D QDY63_14220 hypothetical protein K09943 K09943; uncharacterized protein
D QDY63_25705 DUF2076 domain-containing protein K09945 K09945; uncharacterized protein
D QDY63_23105 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein
D QDY63_05965 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein
D QDY63_00500 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D QDY63_26270 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D QDY63_22290 DUF3820 family protein K09954 K09954; uncharacterized protein
D QDY63_15380 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein
D QDY63_11330 DUF2213 domain-containing protein K09960 K09960; uncharacterized protein
D QDY63_14715 DUF2213 domain-containing protein K09960 K09960; uncharacterized protein
D QDY63_11325 DUF1073 domain-containing protein K09961 K09961; uncharacterized protein
D QDY63_14710 DUF1073 domain-containing protein K09961 K09961; uncharacterized protein
D QDY63_14035 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein
D QDY63_22375 ACT domain-containing protein K09964 K09964; uncharacterized protein
D QDY63_14345 DUF1989 domain-containing protein K09967 K09967; uncharacterized protein
D QDY63_03120 HutD family protein K09975 K09975; uncharacterized protein
D QDY63_16470 DUF1853 family protein K09977 K09977; uncharacterized protein
D QDY63_18565 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein
D QDY63_21500 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D QDY63_08485 VWA domain-containing protein K09989 K09989; uncharacterized protein
D QDY63_01000 metal-sensing transcriptional repressor K07807 K07807; uncharacterized protein
D QDY63_23100 imelysin family protein K07338 K07338; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2026