+E Transcription factors KO #

  Transcription Factors - Peribacillus butanolivorans

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D DTO10_06605 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D DTO10_05405 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D DTO10_06170 helix-turn-helix domain-containing protein K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] C LysR family D DTO10_05980 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D DTO10_08400 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D DTO10_11420 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D DTO10_00085 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D DTO10_11520 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D DTO10_24925 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D DTO10_25610 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D DTO10_25690 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family D DTO10_01170 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D DTO10_10565 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D DTO10_03450 transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family D DTO10_06850 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DTO10_05335 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DTO10_11455 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DTO10_13725 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D DTO10_00700 LacI family DNA-binding transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D DTO10_07720 LacI family DNA-binding transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D DTO10_08140 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor C GntR family D DTO10_14410 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D DTO10_16310 GntR family transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA D DTO10_21130 GntR family transcriptional regulator K24966 gamR; GntR family transcriptional regulator, amino sugar utilization regulator D DTO10_12925 phnF; phosphonate metabolism transcriptional regulator PhnF K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D DTO10_20905 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D DTO10_23565 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D DTO10_24395 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D DTO10_04890 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DTO10_05090 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DTO10_22655 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D DTO10_00340 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DTO10_17685 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DTO10_22530 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D DTO10_19300 GntR family transcriptional regulator K07979 ytrA; GntR family transcriptional regulator D DTO10_13450 GntR family transcriptional regulator K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor C TetR/AcrR family D DTO10_25375 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D DTO10_04785 TetR/AcrR family transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D DTO10_07330 TetR/AcrR family transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor D DTO10_09265 TetR/AcrR family transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor D DTO10_16120 TetR/AcrR family transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor D DTO10_19075 TetR/AcrR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D DTO10_24565 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator C Lrp/AsnC family D DTO10_17355 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DTO10_17790 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DTO10_17800 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DTO10_21810 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DTO10_22360 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D DTO10_04700 DNA-binding response regulator K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein C MarR family D DTO10_08100 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D DTO10_11090 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D DTO10_18265 HTH-type transcriptional regulator Hpr K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr D DTO10_19480 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D DTO10_02730 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D DTO10_04695 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D DTO10_24365 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D DTO10_21260 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D DTO10_12990 MerR family transcriptional regulator K11923 cueR; MerR family transcriptional regulator, copper efflux regulator D DTO10_26450 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D DTO10_02455 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D DTO10_02690 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D DTO10_03370 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D DTO10_15285 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family D DTO10_24420 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D DTO10_00815 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DTO10_14830 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DTO10_22060 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DTO10_22280 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DTO10_22285 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DTO10_22320 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DTO10_22325 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D DTO10_23830 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor C CRP/FNR family D DTO10_25510 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C Rrf2 family D DTO10_01940 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D DTO10_03860 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D DTO10_05575 Rrf2 family transcriptional regulator K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB D DTO10_07620 Rrf2 family transcriptional regulator K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB C ArsR family D DTO10_17305 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D DTO10_17250 transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D DTO10_12780 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor C XRE family D DTO10_04045 helix-turn-helix domain-containing protein K19449 sinR; XRE family transcriptional regulator, master regulator for biofilm formation D DTO10_10195 helix-turn-helix domain-containing protein K19449 sinR; XRE family transcriptional regulator, master regulator for biofilm formation D DTO10_06945 helix-turn-helix domain-containing protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D DTO10_21180 helix-turn-helix domain-containing protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family D DTO10_05785 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D DTO10_07960 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D DTO10_14995 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D DTO10_23165 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D DTO10_24195 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D DTO10_24820 phaQ; poly-beta-hydroxybutyrate-responsive repressor K10947 K10947; PadR family transcriptional regulator D DTO10_25145 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D DTO10_26405 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D DTO10_01655 transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D DTO10_02180 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D DTO10_25850 PAS domain S-box protein K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D DTO10_08935 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D DTO10_11990 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D DTO10_00650 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D DTO10_13545 AAA family ATPase K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D DTO10_23000 PAS domain-containing protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D DTO10_25285 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D DTO10_09125 hypothetical protein K26990 rsoA; sigma-O factor regulatory protein RsoA D DTO10_04880 carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator D DTO10_25130 hypothetical protein K02647 cdaR; carbohydrate diacid regulator D DTO10_01455 PAS domain S-box protein K06714 rocR; arginine utilization regulatory protein D DTO10_06475 PAS domain-containing protein K06714 rocR; arginine utilization regulatory protein D DTO10_06020 sigma-54-dependent Fis family transcriptional regulator K06714 rocR; arginine utilization regulatory protein D DTO10_13335 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D DTO10_20555 GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor D DTO10_01815 transcriptional regulator K07727 K07727; putative transcriptional regulator D DTO10_17290 transcriptional regulator K07727 K07727; putative transcriptional regulator D DTO10_06530 transcriptional regulator K07729 K07729; putative transcriptional regulator D DTO10_09675 transcriptional regulator K07729 K07729; putative transcriptional regulator D DTO10_15865 transcriptional regulator K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family D DTO10_13165 antitoxin endoai K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C Other families B Other transcription factors C BglG family D DTO10_13665 transcription antiterminator K03480 glcT; transcriptional antiterminator D DTO10_06115 PRD domain-containing protein K03483 mtlR; mannitol operon transcriptional activator C Others D DTO10_23205 CsoR family transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D DTO10_12825 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D DTO10_08810 PucR family transcriptional regulator K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator D DTO10_05905 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D DTO10_11940 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D DTO10_12055 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D DTO10_11670 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DTO10_11680 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DTO10_08870 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator D DTO10_25460 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator D DTO10_02970 transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism D DTO10_13370 ROK family transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene D DTO10_03580 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D DTO10_19170 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D DTO10_24090 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D DTO10_24110 thiazole tautomerase TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D DTO10_12200 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D DTO10_17470 paaX; phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D DTO10_22095 phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D DTO10_15520 hypothetical protein K03973 pspC; phage shock protein C D DTO10_09960 hypothetical protein K05311 cggR; central glycolytic genes regulator D DTO10_02325 trp RNA-binding attenuation protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D DTO10_20185 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D DTO10_10995 RsfA family transcriptional regulator K06314 rsfA; prespore-specific regulator D DTO10_20015 RsfA family transcriptional regulator K06314 rsfA; prespore-specific regulator D DTO10_18120 transcriptional regulator K06315 splA; transcriptional regulator of the spore photoproduct lyase operon D DTO10_16155 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D DTO10_26530 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D DTO10_04975 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D DTO10_13555 anti-terminator HutP K09683 hutP; hut operon positive regulatory protein D DTO10_06745 hypothetical protein K02250 comK; competence protein ComK D DTO10_18385 transcriptional regulator K02250 comK; competence protein ComK D DTO10_20040 transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0