+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Pseudomonas cavernae

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E D3880_16795 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) C HU (heat unstable protein) D D3880_21880 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D D3880_09610 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D D3880_10850 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D D3880_10135 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D D3880_14845 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D D3880_20000 curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D D3880_19995 chaperone modulatory protein CbpM K18997 cbpM; chaperone modulatory protein CbpM D D3880_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D D3880_07185 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D D3880_19920 DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D D3880_01910 RNA chaperone Hfq K03666 hfq; host factor-I protein D D3880_18060 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D D3880_21705 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D3880_03420 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D3880_05120 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D3880_05805 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D3880_05790 yejK; nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D D3880_09515 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D D3880_14925 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D D3880_14920 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B C Divisome proteins D D3880_18280 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D D3880_06740 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D D3880_01350 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D D3880_18330 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D D3880_12320 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D D3880_18335 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D D3880_18285 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D D3880_18305 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D D3880_01355 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D D3880_18275 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D D3880_09520 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D D3880_21320 cell division protein ZapA K09888 zapA; cell division protein ZapA D D3880_21315 TIGR02449 family protein K09892 zapB; cell division protein ZapB D D3880_18435 cell division protein ZapE K06916 zapE; cell division protein ZapE D D3880_01895 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D D3880_03340 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3880_10405 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3880_12780 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3880_18125 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D D3880_07480 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D D3880_07475 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D D3880_07470 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D D3880_14215 CDP-glycerol--UDP-pyrophosphoryl-N-acetylglucosaminyl-N-acetylmannosamine glycerophosphotransferase K13053 sulA; cell division inhibitor SulA C Other chromosome partitioning proteins D D3880_18620 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D D3880_18615 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D D3880_18610 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D D3880_19530 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D D3880_22540 ParA family protein K03496 parA; chromosome partitioning protein D D3880_09235 ParA family protein K03496 parA; chromosome partitioning protein D D3880_20340 ParA family protein K03496 parA; chromosome partitioning protein D D3880_22535 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D3880_20080 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D D3880_20095 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D D3880_22550 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D D3880_22545 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D D3880_21570 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D D3880_06180 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D D3880_16415 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D D3880_00400 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024