+D Protein KO
#
Membrane Trafficking - Pochonia chlamydosporia
%
!
AExocytosis
B Calcium ion-dependent exocytosis
C Synaptotagmins
C Septins
D VFPPC_03585 cell division control protein 3 K16944 SEPT7; septin 7
C DOC-2 proteins
C Acrosomal exocytosis proteins
D VFPPC_01104 3-phosphoinositide-dependent protein kinase 1 K06276 PDPK1; 3-phosphoinositide dependent protein kinase-1 [EC:2.7.11.1]
C Phospholipases
D VFPPC_06164 phosphoinositide-specific phospholipase C K05857 PLCD; phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]
D VFPPC_03646 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2 K05857 PLCD; phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]
D VFPPC_03150 phospholipase D1 (PLD1) K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D VFPPC_03568 phospholipase PldA K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
C Kinases and associated proteins
D VFPPC_07745 phosphatidylinositol-4-phosphate 5-kinase its3 K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]
D VFPPC_01576 serine/threonine-protein kinase pak1/shk1 K04409 PAK1; p21-activated kinase 1 [EC:2.7.11.1]
D VFPPC_05790 serine/threonine-protein kinase 24 K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4 [EC:2.7.11.1]
D VFPPC_04913 serine/threonine-protein kinase K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4 [EC:2.7.11.1]
D VFPPC_13988 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VFPPC_01656 serine/threonine protein kinase Kin1 K19852 KIN1_2; serine/threonine protein kinase KIN1/2 [EC:2.7.11.1]
C Others
B Small GTPases and associated proteins
C Rab GTPases
D VFPPC_05086 RAB/GTPase K07901 RAB8A; Ras-related protein Rab-8A
C Rab associated proteins
D VFPPC_14079 EF-hand domain-containing protein K02183 CALM; calmodulin
D VFPPC_06706 GDP/GTP exchange factor Sec2p K19940 SEC2; Rab guanine nucleotide exchange factor SEC2
D VFPPC_04962 Sec1 family superfamily K15292 STXBP1; syntaxin-binding protein 1
D VFPPC_08038 SNARE-dependent exocytosis protein (Sro7) K08518 STXBP5; syntaxin-binding protein 5
D VFPPC_07839 phosphatase K01099 INPP5B_F; inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36]
D VFPPC_16958 GTPase activating protein (Gyp3) K19953 GRTP1; TBC1 domain family member 6
D VFPPC_04665 GTPase activating protein K19951 TBC1D8_9; TBC1 domain family member 8/9
D VFPPC_00707 peroxisomal targeting signal receptor K13342 PEX5; peroxin-5
D VFPPC_08595 rab proteins geranylgeranyltransferase component A K23460 CHM; Rab proteins geranylgeranyltransferase component A
D VFPPC_08345 prenyltransferase alpha subunit repeat protein K14050 RABGGTA; geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
D VFPPC_01108 WD repeat protein K24155 DMXL; rabconnectin-3a
C Rho GTPases
D VFPPC_04440 small GTPase superfamily, Rho type K04393 CDC42; cell division control protein 42
D VFPPC_04885 rho GTPase K04392 RAC1; Ras-related C3 botulinum toxin substrate 1
C Other small GTPases and associated proteins
B Tethering complex
C Exocyst complex
D VFPPC_01709 exocyst complex component Sec3 K19983 EXOC1; exocyst complex component 1
D VFPPC_13511 exocyst complex component Sec5 K17637 EXOC2; exocyst complex component 2
D VFPPC_12921 exocyst complex component Sec6 K06110 EXOC3; exocyst complex component 3
D VFPPC_06032 exocyst complex component Sec8 K06111 EXOC4; exocyst complex component 4
D VFPPC_09204 exocyst complex component Sec10 K19984 EXOC5; exocyst complex component 5
D VFPPC_13654 exocyst complex component Sec15 K19985 EXOC6; exocyst complex component 6
D VFPPC_03510 exocyst complex protein exo70 K07195 EXOC7; exocyst complex component 7
D VFPPC_09048 exocyst complex component exo84 K19986 EXOC8; exocyst complex component 8
C Exocyst complex assembly proteins
D VFPPC_16894 DSS1/SEM1 family domain-containing protein K10881 SHFM1; 26 proteasome complex subunit DSS1
D VFPPC_09803 actin lateral binding protein K17945 TPM1_2; tropomyosin, fungi type
D VFPPC_15185 tropomyosin like domain-containing protein K17945 TPM1_2; tropomyosin, fungi type
B Others
C Exomer complex
D VFPPC_04802 chitin biosynthesis protein K19877 CHS5; chitin biosynthesis protein CHS5
D VFPPC_10272 clathrin-coated vesiclec protein K19881 BUD7; Chs5-Arf1p-binding protein BUD7/BCH1
C Others
D VFPPC_06752 CRAL/TRIO domain-containing protein K19996 SFH5; phosphatidylinositol transfer protein SFH5
#
ASNARE
B Syntaxin (Qa)
C Stx-PM
D VFPPC_08289 t-SNARE protein K08486 STX1B_2_3; syntaxin 1B/2/3
D VFPPC_03156 t-SNARE protein K08486 STX1B_2_3; syntaxin 1B/2/3
C Stx-Endo
C Stx-TGN / EE
D VFPPC_04541 SNARE complex subunit Tlg2 K08489 STX16; syntaxin 16
C Stx-cisGolgi
D VFPPC_06693 syntaxin 5 K08490 STX5; syntaxin 5
C Stx-sER
C Stx-rER
B SNAP-25[N] (Qb)
C Vti1
D VFPPC_12972 vesicle transport v-SNARE protein K08493 VTI1; vesicle transport through interaction with t-SNAREs 1
C NPSN
C Gos1 (Gos28)
D VFPPC_00563 vesicle transport v-snare protein K08495 GOSR1; golgi SNAP receptor complex member 1
C Bos1 / Membrin
D VFPPC_03215 v-SNARE protein K08496 GOSR2; golgi SNAP receptor complex member 2
C Sec20
D VFPPC_00389 Sec20 domain-containing protein K08497 SEC20; protein transport protein SEC20
B SNAP-25[C] (Qc)
C STX6
C STX8
D VFPPC_13000 SNARE complex subunit (Syn8) K08501 STX8; syntaxin 8
D VFPPC_02175 SNARE complex subunit (Vam7) K08502 VAM7; regulator of vacuolar morphogenesis
C STX10
C Bet1
D VFPPC_13185 ER-golgi SNARE complex subunit Bet1 K08504 BET1; blocked early in transport 1
D VFPPC_15394 SNARE protein K08504 BET1; blocked early in transport 1
C Sft1
C Syp7
C Use1
B SNAP-25 (Qb,c)
C SNAP-23
C SNAP-25
D VFPPC_17981 serine/threonine dehydratase, pyridoxal-phosphate-binding site K19950 SEC9; protein transport protein SEC9
C SNAP-29
C SNAP-47
B VAMP, Ykt6, Sec22 (R)
C VAMP
D VFPPC_08614 synaptobrevin domain-containing protein K08513 VAMP4; vesicle-associated membrane protein 4
D VFPPC_12053 synaptobrevin domain-containing protein K08513 VAMP4; vesicle-associated membrane protein 4
D VFPPC_18222 synaptobrevin domain-containing protein K08513 VAMP4; vesicle-associated membrane protein 4
D VFPPC_07523 v-SNARE protein K08515 VAMP7; vesicle-associated membrane protein 7
C Ykt6
D VFPPC_14523 synaptobrevin domain-containing protein K08516 YKT6; synaptobrevin homolog YKT6
C Sec22
D VFPPC_13992 protein transport protein sec22 K08517 SEC22; vesicle transport protein SEC22
C Tomosyn
D VFPPC_08038 SNARE-dependent exocytosis protein (Sro7) K08518 STXBP5; syntaxin-binding protein 5
C Putative SNAREs
B SNARE associated proteins
C Syntaxin-binding proteins
D VFPPC_04962 Sec1 family superfamily K15292 STXBP1; syntaxin-binding protein 1
D VFPPC_09456 golgi transport protein Sly1 K19998 SCFD1; sec1 family domain-containing protein 1
D VFPPC_06154 alpha-taxilin K26808 TXLN; taxilin
C Palmitoyltransferases
D VFPPC_13974 palmitoyltransferase PFA3 K20028 ZDHHC2_15_20; palmitoyltransferase ZDHHC2/15/20 [EC:2.3.1.225]
D VFPPC_01615 DHHC zinc finger protein K20003 ZDHHC4; palmitoyltransferase ZDHHC4 [EC:2.3.1.225]
D VFPPC_02167 palmitoyltransferase akr1 K20032 ZDHHC13_17; palmitoyltransferase ZDHHC13/17 [EC:2.3.1.225]
C Others
D VFPPC_01003 vesicular-fusion protein SEC18 K06027 NSF; vesicle-fusing ATPase [EC:3.6.4.6]
D VFPPC_00766 soluble NSF attachment protein, SNAP domain-containing protein K15296 NAPA; alpha-soluble NSF attachment protein
D VFPPC_08790 sorting nexin-4 K17919 SNX4; sorting nexin-4
D VFPPC_02897 sorting nexin-41 K21996 SNX41_42; sorting nexin-41/42
D VFPPC_08132 vacuolar protein sorting-associated protein 74 K15620 GOLPH3; golgi phosphoprotein 3
D VFPPC_04361 cell division cycle protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase
D VFPPC_06327 SEP domain-containing protein K14012 NSFL1C; UBX domain-containing protein 1
#
AEndocytosis
B Clathrin-mediated endocytosis
C Clathrin
D VFPPC_17752 clathrin heavy chain 1 K04646 CLTC; clathrin heavy chain
C Dynamin
D VFPPC_05521 dynamin-2 K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
C AP-2 complex
D VFPPC_13799 hypothetical protein K11824 AP2A; AP-2 complex subunit alpha
D VFPPC_13789 non-SMC mitotic condensation complex subunit 1 domain-containing protein K11825 AP2B1; AP-2 complex subunit beta-1
D VFPPC_07829 AP-2 complex subunit mu-1 K11826 AP2M1; AP-2 complex subunit mu-1
D VFPPC_05249 ap-2 complex subunit sigma K11827 AP2S1; AP-2 complex subunit sigma-1
C Other core components
D VFPPC_07526 Fes/CIP4 domain-containing protein K20042 FCHO; F-BAR domain only protein
D VFPPC_08821 epsin-3 K12471 EPN; epsin
D VFPPC_01390 EH domain binding protein epsin 2 K12471 EPN; epsin
D VFPPC_00888 UBA/TS-N domain-containing protein K12472 EPS15; epidermal growth factor receptor substrate 15
D VFPPC_08775 ENTH domain-containing protein K20044 PICALM; phosphatidylinositol-binding clathrin assembly protein
D VFPPC_03085 reduced viability upon starvation protein K12562 AMPH; amphiphysin
D VFPPC_05473 cytoskeleton assembly control protein Sla1 K20046 SLA1; actin cytoskeleton-regulatory complex protein SLA1
D VFPPC_02903 hypothetical protein K20047 PAN1; actin cytoskeleton-regulatory complex protein PAN1
D VFPPC_13785 endocytosis and cytoskeletal organization protein K20048 END3; actin cytoskeleton-regulatory complex protein END3
D VFPPC_05285 heat shock protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D VFPPC_08362 heat shock protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Low-density lipoprotein receptor (LDLR) family proteins
C LDLR adaptor proteins
D VFPPC_07745 phosphatidylinositol-4-phosphate 5-kinase its3 K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]
C GPCR adaptor proteins
D VFPPC_06935 arrestin (or S-antigen) domain-containing protein K20059 LDB19; arrestin-related trafficking adapter 1
D VFPPC_08286 arrestin domain-containing protein K20061 ALY1_2; arrestin-related trafficking adapter 3/6
D VFPPC_01420 arrestin domain-containing protein K20062 ART4_5_7; arrestin-related trafficking adapter 4/5/7
D VFPPC_03944 arrestin domain-containing protein K20062 ART4_5_7; arrestin-related trafficking adapter 4/5/7
D VFPPC_18338 arrestin domain-containing protein K20062 ART4_5_7; arrestin-related trafficking adapter 4/5/7
D VFPPC_12820 pH-response regulator protein palF/RIM8 K20063 RIM8; arrestin-related trafficking adapter 9
C Receptor tyrosine kinase (RTK) adaptor proteins
C Inositol 5-phosphatases
D VFPPC_07839 phosphatase K01099 INPP5B_F; inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36]
D VFPPC_09221 SacI domain and endonuclease/exonuclease/phosphatase family protein K20279 SYNJ; synaptojanin [EC:3.1.3.36]
C Kinases
D VFPPC_04287 NAK protein kinase K08853 AAK; AP2-associated kinase [EC:2.7.11.1]
D VFPPC_01594 SCY1 protein kinase K17541 SCYL2; SCY1-like protein 2
C Ubiquitin E3 ligases
D VFPPC_12701 E3 ubiquitin--protein ligase pub1 K10591 NEDD4; E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26]
C Others
D VFPPC_04590 cytoskeleton assembly control protein Sla2 K20040 HIP1R; huntingtin-interacting protein 1-related protein
D VFPPC_00384 calnexin precursor K08054 CANX; calnexin
D VFPPC_07672 adaptin ear-binding coat-associated protein 2 K20069 NECAP1_2; adaptin ear-binding coat-associated protein 1/2
B Lipid raft mediated endocytosis
C Caveolin-mediated endocytosis
D VFPPC_05521 dynamin-2 K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
D VFPPC_04994 protein kinase c K02677 PRKCA; classical protein kinase C alpha type [EC:2.7.11.13]
C Flotillin-dependent endocytosis
D VFPPC_13259 flotillin domain-containing protein K07192 FLOT; flotillin
C GRAF1-dependent endocytosis
D VFPPC_04440 small GTPase superfamily, Rho type K04393 CDC42; cell division control protein 42
D VFPPC_12813 ADP-ribosylation factor GTPase of the ras superfamily K07937 ARF1_2; ADP-ribosylation factor 1/2
C Arf6-dependent endocytosis
D VFPPC_09290 ADP-ribosylation factor 6 K07941 ARF6; ADP-ribosylation factor 6
D VFPPC_04885 rho GTPase K04392 RAC1; Ras-related C3 botulinum toxin substrate 1
C RhoA-dependent endocytosis
D VFPPC_12285 small GTPase-binding protein K04513 RHOA; Ras homolog gene family, member A
D VFPPC_15651 small GTPase-binding protein K04513 RHOA; Ras homolog gene family, member A
D VFPPC_05521 dynamin-2 K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
B Phagocytosis
C Fc receptors
C Integrins (complement receptors)
C Opsonins
C Toll-like receptors
C C-lectin receptors
C Scavenger receptors
C Coronins
C Others
D VFPPC_01135 myosin-1 K10356 MYO1; myosin I
B Macropinocytosis
C Ras GTPases
D VFPPC_13768 small GTPase superfamily, Ras type K07827 KRAS; GTPase KRas
D VFPPC_14226 ras-2 protein K07827 KRAS; GTPase KRas
D VFPPC_04885 rho GTPase K04392 RAC1; Ras-related C3 botulinum toxin substrate 1
D VFPPC_04440 small GTPase superfamily, Rho type K04393 CDC42; cell division control protein 42
C Kinases
D VFPPC_04678 phosphoinositide 3-kinase K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
D VFPPC_14501 1-phosphatidylinositol-3-phosphate 5-kinase (Fab1) K00921 PIKFYVE; 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]
D VFPPC_01576 serine/threonine-protein kinase pak1/shk1 K04409 PAK1; p21-activated kinase 1 [EC:2.7.11.1]
C Phospholipase C
D VFPPC_06164 phosphoinositide-specific phospholipase C K05857 PLCD; phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]
D VFPPC_03646 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2 K05857 PLCD; phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]
C Sorting nexins
D VFPPC_07931 sorting nexin 3 K17917 SNX1_2; sorting nexin-1/2
C Others
B Bin/Amphiphysin/Rvs (BAR) family proteins
C N-BAR proteins
D VFPPC_03085 reduced viability upon starvation protein K12562 AMPH; amphiphysin
D VFPPC_16001 protein hob3 K20120 BIN3; bridging integrator 3
C F-BAR proteins
D VFPPC_09381 actin polymerization protein Bzz1 K20121 FNBP1; formin-binding protein 1
D VFPPC_07526 Fes/CIP4 domain-containing protein K20042 FCHO; F-BAR domain only protein
D VFPPC_04817 Rho GTPase activator (Rgd1) K20643 RGD1; Rho GTPase-activating protein RGD1
C I-BAR proteins
B Rab GTPases and associated proteins
C Rab GTPases
D VFPPC_08459 rab5-like protein ypt5 protein K07889 RAB5C; Ras-related protein Rab-5C
D VFPPC_04326 rab5-like GTPase K07889 RAB5C; Ras-related protein Rab-5C
C Rab associated proteins
D VFPPC_00471 guanine nucleotide exchange factor Vps9 K20131 RABGEF1; Rab5 GDP/GTP exchange factor
D VFPPC_07839 phosphatase K01099 INPP5B_F; inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36]
D VFPPC_04678 phosphoinositide 3-kinase K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
D VFPPC_03596 VPS15 protein kinase K08333 PIK3R4; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
D VFPPC_07082 vacuolar protein sorting-associated protein 45 K12479 VPS45; vacuolar protein sorting-associated protein 45
B Arf GTPases and associated proteins
C Arf GTPases
D VFPPC_12813 ADP-ribosylation factor GTPase of the ras superfamily K07937 ARF1_2; ADP-ribosylation factor 1/2
D VFPPC_09290 ADP-ribosylation factor 6 K07941 ARF6; ADP-ribosylation factor 6
C Arf associated proteins
D VFPPC_01583 stromal membrane-associated protein 1 K12486 SMAP; stromal membrane-associated protein
B Others
C Fucosyltransferase
C EFR3-PI4KIII alpha complex and associated proteins
D VFPPC_00697 phosphatidylinositol 4-kinase K00888 PI4KA; phosphatidylinositol 4-kinase A [EC:2.7.1.67]
D VFPPC_04848 protein EFR3 K21842 EFR3; protein EFR3
D VFPPC_02620 filamentation protein K21845 YPP1; cargo-transport protein YPP1
C Insulin-like growth factor-binding proteins
C Others
#
AEndosome - Lysosome transport
B Rab GTPases and associated proteins
C Rab GTPases
D VFPPC_08459 rab5-like protein ypt5 protein K07889 RAB5C; Ras-related protein Rab-5C
D VFPPC_04326 rab5-like GTPase K07889 RAB5C; Ras-related protein Rab-5C
D VFPPC_13960 GTP-binding protein ypt7 K07897 RAB7A; Ras-related protein Rab-7A
C Retromer subcomplex
D VFPPC_05445 vacuolar protein sorting-associated protein VPS35 K18468 VPS35; vacuolar protein sorting-associated protein 35
D VFPPC_16695 retrograde transporter K18467 VPS29; vacuolar protein sorting-associated protein 29
D VFPPC_00691 vacuolar protein sorting 26 K18466 VPS26A_B; vacuolar protein sorting-associated protein 26A/B
C FTS/Hook/FHIP (FHF) complex
D VFPPC_01093 microtubule binding protein HOOK3 K16536 HOOK3; protein HOOK3
C Rab associated proteins
D VFPPC_03560 zinc finger protein K11982 RNF115_126; E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
D VFPPC_04678 phosphoinositide 3-kinase K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
D VFPPC_17571 proteasome subunit alpha type-7 K02731 PSMA7; 20S proteasome subunit alpha 4 [EC:3.4.25.1]
D VFPPC_02857 TBC domain-containing protein K18469 TBC1D5; TBC1 domain family member 5
D VFPPC_06249 GTPase-activating protein GYP7 K20168 TBC1D15; TBC1 domain family member 15
D VFPPC_08595 rab proteins geranylgeranyltransferase component A K23460 CHM; Rab proteins geranylgeranyltransferase component A
D VFPPC_08345 prenyltransferase alpha subunit repeat protein K14050 RABGGTA; geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
D VFPPC_02330 TBC domain-containing protein K20176 SGSM3; small G protein signaling modulator 3
D VFPPC_08132 vacuolar protein sorting-associated protein 74 K15620 GOLPH3; golgi phosphoprotein 3
B Arf GTPases and associated proteins
C Arf GTPases
D VFPPC_10046 ADP-ribosylation factor-like protein K07955 ARL8; ADP-ribosylation factor-like protein 8
D VFPPC_13589 ADP-ribosylation factor family protein K07955 ARL8; ADP-ribosylation factor-like protein 8
C BLOC-one-related complex (BORC)
C N-acetyl transferase complex C (NatC)
D VFPPC_08157 L-A virus GAG protein N-acetyltransferase K00670 NAA30; N-alpha-acetyltransferase 30 [EC:2.3.1.256]
D VFPPC_00823 amino-acid N-acetyltransferase subunit Mak10 K20823 NAA35; N-alpha-acetyltransferase 35, NatC auxiliary subunit
C Other Arf associated proteins
B Endosomal sorting complexes required for transport (ESCRT)
C ESCRT-0 complex
D VFPPC_01527 vacuolar sorting-associated protein (Vps27) K12182 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate
D VFPPC_13070 class E vacuolar protein-sorting machinery protein HSE1 K04705 STAM; signal transducing adaptor molecule
C ESCRT-I complex
D VFPPC_05358 tumor susceptibility protein K12183 TSG101; ESCRT-I complex subunit TSG101
D VFPPC_08900 vacuolar protein sorting-associated protein Vps28 K12184 VPS28; ESCRT-I complex subunit VPS28
C ESCRT-II complex
D VFPPC_01456 vacuolar protein-sorting-associated protein K12189 VPS25; ESCRT-II complex subunit VPS25
D VFPPC_05021 vacuolar protein sorting protein K12190 VPS36; ESCRT-II complex subunit VPS36
C ESCRT-III complex
D VFPPC_06616 chromatin modifying protein 1b K12197 CHMP1; charged multivesicular body protein 1
D VFPPC_01024 vacuolar protein-sorting-associated protein K12193 VPS24; charged multivesicular body protein 3
D VFPPC_13436 Snf7 protein K12198 CHMP5; charged multivesicular body protein 5
D VFPPC_01065 Snf7 family protein K12195 CHMP6; charged multivesicular body protein 6
D VFPPC_14159 vacuolar sorting protein SNF7 family protein K15053 CHMP7; charged multivesicular body protein 7
D VFPPC_14304 vacuolar protein sorting-associated protein VPS4 K12196 VPS4; vacuolar protein-sorting-associated protein 4
C ESCRT associated proteins
D VFPPC_10966 short-chain dehydrogenase reductase sdr protein K12199 VTA1; vacuolar protein sorting-associated protein VTA1
D VFPPC_11702 pH-response regulator protein palA/RIM20 K12200 PDCD6IP; programmed cell death 6-interacting protein
B Tethering complex
C CORVET complex
D VFPPC_04560 TGF beta receptor associated protein 1 K20177 VPS3; vacuolar protein sorting-associated protein 3
D VFPPC_08405 golgi complex component (Vps8) K20178 VPS8; vacuolar protein sorting-associated protein 8
D VFPPC_15473 vacuolar protein sorting protein (VPS11) K20179 VPS11; vacuolar protein sorting-associated protein 11
D VFPPC_06988 vacuolar protein sorting vps16 K20180 VPS16; vacuolar protein sorting-associated protein 16
D VFPPC_04428 vacuolar protein sorting protein DigA K20181 VPS18; vacuolar protein sorting-associated protein 18
D VFPPC_02978 vacuolar sorting protein K20182 VPS33A; vacuolar protein sorting-associated protein 33A
C Hops complex
D VFPPC_15473 vacuolar protein sorting protein (VPS11) K20179 VPS11; vacuolar protein sorting-associated protein 11
D VFPPC_06988 vacuolar protein sorting vps16 K20180 VPS16; vacuolar protein sorting-associated protein 16
D VFPPC_04428 vacuolar protein sorting protein DigA K20181 VPS18; vacuolar protein sorting-associated protein 18
D VFPPC_02978 vacuolar sorting protein K20182 VPS33A; vacuolar protein sorting-associated protein 33A
D VFPPC_13472 vacuolar morphogenesis protein AvaB K20183 VPS39; Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
D VFPPC_07989 vacuolar assembly protein K20184 VPS41; vacuolar protein sorting-associated protein 41
B Acidification regulators
C Rabconnectin-3 complex
D VFPPC_01108 WD repeat protein K24155 DMXL; rabconnectin-3a
C RAVE complex
D VFPPC_01108 WD repeat protein K24155 DMXL; rabconnectin-3a
D VFPPC_13359 SCF complex subunit Skp1 K03094 SKP1; S-phase kinase-associated protein 1
B Others
C AP-3 complex
D VFPPC_14659 AP-3 complex subunit delta K12396 AP3D; AP-3 complex subunit delta
D VFPPC_05003 AP-3 adaptor complex subunit beta K12397 AP3B; AP-3 complex subunit beta
D VFPPC_07337 AP-3 adaptor complex subunit mu K12398 AP3M; AP-3 complex subunit mu
D VFPPC_12935 AP-3 complex subunit sigma K12399 AP3S; AP-3 complex subunit sigma
C BLOC-1 complex
C BLOC-1 complex (yeast)
D VFPPC_12956 hypothetical protein K22243 KXD1; biogenesis of lysosome-related organelles complex 1 subunit KXD1
C BLOC-2 complex
C BLOC-3 complex
C Ferlins
C Others
D VFPPC_12720 SAND protein K20195 MON1; vacuolar fusion protein MON1
D VFPPC_01528 ubiquitin carboxyl-terminal hydrolase 2 K11839 USP8; ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12]
D VFPPC_07782 endosome-associated ubiquitin isopeptidase (AmsH) K11866 STAMBP; STAM-binding protein [EC:3.4.19.12]
D VFPPC_05641 vacuolar sorting protein 1 K23481 VPS1; vacuolar protein sorting-associated protein 1
D VFPPC_10090 Beige/BEACH domain-containing protein K24781 BPH1; beige protein homolog 1
#
AProtein recycling
B Rab GTPases and associated proteins
C Rab GTPases
D VFPPC_03472 secretion-related small GTPase K07904 RAB11A; Ras-related protein Rab-11A
C Rab4 associated proteins
D VFPPC_08790 sorting nexin-4 K17919 SNX4; sorting nexin-4
D VFPPC_14719 dynein light intermediate chain K10416 DYNC1LI; dynein cytoplasmic 1 light intermediate chain
C Rab11 associated proteins
D VFPPC_13028 WD repeat containing protein 44 K20241 WDR44; WD repeat-containing protein 44
D VFPPC_01680 protein transporter sec-13 K14004 SEC13; protein transport protein SEC13
D VFPPC_13654 exocyst complex component Sec15 K19985 EXOC6; exocyst complex component 6
D VFPPC_08132 vacuolar protein sorting-associated protein 74 K15620 GOLPH3; golgi phosphoprotein 3
C Other Rab GTPase associated proteins
D VFPPC_07839 phosphatase K01099 INPP5B_F; inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36]
D VFPPC_00471 guanine nucleotide exchange factor Vps9 K20131 RABGEF1; Rab5 GDP/GTP exchange factor
B Others
C Glutamate receptor-interacting proteins (GRIPs)
C GRIP associated proteins
C EARP complex
D VFPPC_14345 Vps51/Vps67-like protein K20296 ANG2; vacuolar protein sorting-associated protein 51
D VFPPC_03544 Vps52 / Sac2 family protein K20298 VPS52; vacuolar protein sorting-associated protein 52
D VFPPC_08413 GARP complex subunit Vps53 K20299 VPS53; vacuolar protein sorting-associated protein 53
C WASH complex
D VFPPC_13096 F-actin-capping protein subunit alpha K10364 CAPZA; F-actin-capping protein subunit alpha
D VFPPC_09179 F-actin capping protein beta subunit K10365 CAPZB; F-actin-capping protein subunit beta
C Retriever complex
D VFPPC_16695 retrograde transporter K18467 VPS29; vacuolar protein sorting-associated protein 29
C Others
#
AEndosome - Golgi transport
B Rab GTPases and associated proteins
C Rab GTPases
C Rab associated proteins
D VFPPC_08132 vacuolar protein sorting-associated protein 74 K15620 GOLPH3; golgi phosphoprotein 3
D VFPPC_04665 GTPase activating protein K19951 TBC1D8_9; TBC1 domain family member 8/9
D VFPPC_05503 TATA element modulatory factor 1 TATA binding domain-containing protein K20286 TMF1; TATA element modulatory factor
D VFPPC_13686 dynein light chain-related protein K10419 DYNLRB; dynein light chain roadblock-type
D VFPPC_00849 dynactin K04648 DCTN1; dynactin 1
D VFPPC_07839 phosphatase K01099 INPP5B_F; inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36]
D VFPPC_03243 vacuolar protein sorting-associated protein vps13 K19525 VPS13A_C; vacuolar protein sorting-associated protein 13A/C
B Arf GTPases and associated proteins
C Arf GTPases
D VFPPC_12813 ADP-ribosylation factor GTPase of the ras superfamily K07937 ARF1_2; ADP-ribosylation factor 1/2
D VFPPC_13360 small GTPase superfamily, ARF type K07942 ARL1; ADP-ribosylation factor-like protein 1
D VFPPC_04344 ADP-ribosylation factor family protein K07952 ARFRP1; ADP-ribosylation factor related protein 1
C Arf GTPase associated proteins
D VFPPC_03714 zinc finger protein gcs1 K12492 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1
D VFPPC_13783 arf gtpase-activating protein K12493 ARFGAP2_3; ADP-ribosylation factor GTPase-activating protein 2/3
D VFPPC_01583 stromal membrane-associated protein 1 K12486 SMAP; stromal membrane-associated protein
D VFPPC_03044 ARF GTPase activator K12488 ASAP; Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
D VFPPC_07135 guanyl-nucleotide exchange factor (Sec7) K18442 ARFGEF; brefeldin A-inhibited guanine nucleotide-exchange protein
D VFPPC_07094 Sec7 domain-containing protein K18443 GBF1; golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
B Tethering complex
C Conserved oligomeric Golgi (COG) complex
D VFPPC_04388 Vps51/Vps67 K20288 COG1; conserved oligomeric Golgi complex subunit 1
D VFPPC_06180 oligomeric golgi complex subunit 2 protein K20289 COG2; conserved oligomeric Golgi complex subunit 2
D VFPPC_14342 golgi complex component Cog3 K20290 COG3; conserved oligomeric Golgi complex subunit 3
D VFPPC_15125 calcium-transporting ATPase 1 K20291 COG4; conserved oligomeric Golgi complex subunit 4
D VFPPC_08184 component of oligomeric golgi complex 6 K20293 COG6; conserved oligomeric Golgi complex subunit 6
D VFPPC_05472 oligomeric golgi complex component K20295 COG8; conserved oligomeric Golgi complex subunit 8
C GARP complex
D VFPPC_14345 Vps51/Vps67-like protein K20296 ANG2; vacuolar protein sorting-associated protein 51
D VFPPC_03544 Vps52 / Sac2 family protein K20298 VPS52; vacuolar protein sorting-associated protein 52
D VFPPC_08413 GARP complex subunit Vps53 K20299 VPS53; vacuolar protein sorting-associated protein 53
D VFPPC_05905 GARP complex component K17600 VPS54; vacuolar protein sorting-associated protein 54
D VFPPC_06759 GARP complex component K17600 VPS54; vacuolar protein sorting-associated protein 54
C TRAPP complex II
D VFPPC_13354 TRAPP complex subunit (Bet5) K20300 TRAPPC1; trafficking protein particle complex subunit 1
D VFPPC_07336 Longin-like protein K20301 TRAPPC2; trafficking protein particle complex subunit 2
D VFPPC_04316 trafficking protein particle complex subunit 2 K20301 TRAPPC2; trafficking protein particle complex subunit 2
D VFPPC_13822 transport protein particle (TRAPP) complex component Bet3 K20302 TRAPPC3; trafficking protein particle complex subunit 3
D VFPPC_12855 cis-golgi transport protein particle complex subunit K20303 TRAPPC4; trafficking protein particle complex subunit 4
D VFPPC_16292 SPP30 protein K20280 TRAPPC5; trafficking protein particle complex subunit 5
D VFPPC_03642 SPP30 protein K20280 TRAPPC5; trafficking protein particle complex subunit 5
D VFPPC_14158 cis-golgi transport protein particle complex subunit K20305 TRAPPC8; trafficking protein particle complex subunit 8
D VFPPC_06252 hypercellular protein HypA K20306 TRAPPC9; trafficking protein particle complex subunit 9
D VFPPC_15686 TMEM1 family protein K20307 TRAPPC10; trafficking protein particle complex subunit 10
D VFPPC_01493 glutathione transferase omega-1 K20308 TRAPPC11; trafficking protein particle complex subunit 11
D VFPPC_14757 tetratricopeptide-like helical K20309 TRAPPC12; trafficking protein particle complex subunit 12
D VFPPC_00777 hypothetical protein K20310 TRAPPC13; trafficking protein particle complex subunit 13
B Others
C AP-1 complex
D VFPPC_04539 AP-1 complex subunit gamma-1 K12391 AP1G1; AP-1 complex subunit gamma-1
D VFPPC_08079 AP-1 complex subunit beta-1 K12392 AP1B1; AP-1 complex subunit beta-1
D VFPPC_06406 AP-1 complex subunit mu-1 K12393 AP1M; AP-1 complex subunit mu
C AP-3 complex
D VFPPC_14659 AP-3 complex subunit delta K12396 AP3D; AP-3 complex subunit delta
D VFPPC_05003 AP-3 adaptor complex subunit beta K12397 AP3B; AP-3 complex subunit beta
D VFPPC_07337 AP-3 adaptor complex subunit mu K12398 AP3M; AP-3 complex subunit mu
D VFPPC_12935 AP-3 complex subunit sigma K12399 AP3S; AP-3 complex subunit sigma
C AP-4 complex
C GGA
D VFPPC_08128 VHS domain-containing protein K12404 GGA; ADP-ribosylation factor-binding protein GGA
C Aftiphilin/p200/gamma-synergin complex
D VFPPC_02936 HEAT repeat protein K24814 HEATR5; HEAT repeat-containing protein 5
C Others
D VFPPC_03150 phospholipase D1 (PLD1) K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D VFPPC_03568 phospholipase PldA K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D VFPPC_00697 phosphatidylinositol 4-kinase K00888 PI4KA; phosphatidylinositol 4-kinase A [EC:2.7.1.67]
D VFPPC_07745 phosphatidylinositol-4-phosphate 5-kinase its3 K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]
D VFPPC_14501 1-phosphatidylinositol-3-phosphate 5-kinase (Fab1) K00921 PIKFYVE; 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]
D VFPPC_13503 bZIP transcription factor K20316 SCOC; short coiled-coil protein
D VFPPC_14295 SYS1-related integral membrane protein K20318 SYS1; protein SYS1
D VFPPC_13724 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D VFPPC_04199 ATPase, vacuolar ER assembly factor, Vma12 K23542 TMEM199; TMEM199 family protein
D VFPPC_13637 hypothetical protein K23543 CCDC115; coiled-coil domain-containing protein 115
D VFPPC_03522 membrane protein TMS1 K23544 SERINC1; serine incorporator 1
D VFPPC_06709 sorting nexin-3 K17918 SNX3_12; sorting nexin-3/12
D VFPPC_01208 sorting nexin Mvp1 K17922 SNX8; sorting nexin-8
D VFPPC_01639 endosomal peripheral membrane protein K26678 MON2; protein MON2
D VFPPC_00206 protein dopey K26680 DOP1; protein dopey
D VFPPC_13793 golgi apparatus membrane protein TVP15 K26750 TVP15; golgi apparatus membrane protein TVP15
D VFPPC_13118 clathrin-coated vesicle protein K26751 TVP18; golgi apparatus membrane protein TVP18
D VFPPC_12754 hypothetical protein K26752 TVP23; golgi apparatus membrane protein TVP23
D VFPPC_13378 TLG2-vesicle protein K26753 TVP38; golgi apparatus membrane protein TVP38
D VFPPC_05641 vacuolar sorting protein 1 K23481 VPS1; vacuolar protein sorting-associated protein 1
#
AEndoplasmic reticulum (ER) - Golgi transport
B Forward pathways
C Coat protein complex II (COP-II)
D VFPPC_02646 small monomeric gtpase protein K07953 SAR1; GTP-binding protein SAR1 [EC:3.6.5.-]
D VFPPC_01680 protein transporter sec-13 K14004 SEC13; protein transport protein SEC13
D VFPPC_00773 protein transport protein (SEC31) K14005 SEC31; protein transport protein SEC31
D VFPPC_04523 transporter SEC23 K14006 SEC23; protein transport protein SEC23
D VFPPC_07758 Sec23/Sec24 family protein K14007 SEC24; protein transport protein SEC24
D VFPPC_08163 protein transport protein Sec24 K14007 SEC24; protein transport protein SEC24
D VFPPC_06088 COPII coat assembly protein SEC16 K20353 SEC16; COPII coat assembly protein SEC16
C TRAPP complex I
D VFPPC_13354 TRAPP complex subunit (Bet5) K20300 TRAPPC1; trafficking protein particle complex subunit 1
D VFPPC_07336 Longin-like protein K20301 TRAPPC2; trafficking protein particle complex subunit 2
D VFPPC_04316 trafficking protein particle complex subunit 2 K20301 TRAPPC2; trafficking protein particle complex subunit 2
D VFPPC_13822 transport protein particle (TRAPP) complex component Bet3 K20302 TRAPPC3; trafficking protein particle complex subunit 3
D VFPPC_12855 cis-golgi transport protein particle complex subunit K20303 TRAPPC4; trafficking protein particle complex subunit 4
D VFPPC_16292 SPP30 protein K20280 TRAPPC5; trafficking protein particle complex subunit 5
D VFPPC_03642 SPP30 protein K20280 TRAPPC5; trafficking protein particle complex subunit 5
C p24 family proteins
D VFPPC_07311 ERP1 protein precursor K20346 TMED4_9_11; p24 family protein alpha
D VFPPC_15170 emp24/gp25L/p24 family protein K20347 TMED2; p24 family protein beta-1
D VFPPC_16578 ERV25 protein K20352 TMED10; p24 family protein delta-1
C PDI family proteins
D VFPPC_09214 protein disulfide-isomerase precursor K09580 PDIA1; protein disulfide-isomerase A1 [EC:5.3.4.1]
D VFPPC_03736 protein disulfide-isomerase K09580 PDIA1; protein disulfide-isomerase A1 [EC:5.3.4.1]
D VFPPC_05658 ER-resident thioredoxin protein K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1]
D VFPPC_10965 disulfide isomerase K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1]
C Rab GTPases
D VFPPC_01877 GTP-binding protein rab2 K07877 RAB2A; Ras-related protein Rab-2A
C Rab associated proteins
D VFPPC_13373 prenylated Rab acceptor 1 K20359 RABAC1; PRA1 family protein 1
D VFPPC_03543 TBC domain-containing protein K20372 TBC1D20; TBC1 domain family member 20
D VFPPC_00135 GTPase-activating protein GYP1 K20360 TBC1D22; TBC1 domain family member 2
D VFPPC_08502 ER to golgi transport protein Yif1 K20362 YIF1; protein transport protein YIF1
D VFPPC_14555 yos1-like domain-containing protein K22939 IER3IP1; immediate early response 3-interacting protein 1
D VFPPC_01110 intracellular protein transport protein (UsoA) K20361 USO1; intracellular protein transport protein USO1
C ER-Golgi intermediate compartment (ERGIC) proteins
D VFPPC_07040 lectin family integral membrane protein K10080 LMAN1; lectin, mannose-binding 1
D VFPPC_02717 lectin family integral membrane protein K10082 LMAN2; lectin, mannose-binding 2
D VFPPC_07567 glycosyl hydrolase family 47 protein K01230 MAN1A_C; mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]
D VFPPC_08072 class I alpha-mannosidase 1A K01230 MAN1A_C; mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]
D VFPPC_10364 glycosyl hydrolase family 47 protein K01230 MAN1A_C; mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]
D VFPPC_13429 glycosyl hydrolase family 47 protein K01230 MAN1A_C; mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]
D VFPPC_14080 glycoside hydrolase family 47 protein K01230 MAN1A_C; mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]
D VFPPC_12649 glycoside hydrolase family 47 protein K01230 MAN1A_C; mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]
D VFPPC_01697 mannosyl-oligosaccharide alpha-1,2-mannosidase precursor K01230 MAN1A_C; mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]
D VFPPC_03161 endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase K01230 MAN1A_C; mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]
D VFPPC_04306 glycosyl hydrolase family 47 protein K01230 MAN1A_C; mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]
D VFPPC_00495 mannosyl-oligosaccharide 1,2-alpha-mannosidase K23741 MAN1B; endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidase [EC:3.2.1.209]
D VFPPC_16523 COPII-coated vesicle protein (Erv41) K20366 ERGIC2; endoplasmic reticulum-Golgi intermediate compartment protein 2
D VFPPC_12743 COPII-coated vesicle membrane protein Erv46 K20367 ERGIC3; endoplasmic reticulum-Golgi intermediate compartment protein 3
D VFPPC_12778 COPII-coated vesicle protein SurF4/Erv29 K20369 ERV29; ER-derived vesicles protein
D VFPPC_01551 heat shock protein K09490 HSPA5; endoplasmic reticulum chaperone BiP [EC:3.6.4.10]
B Retrieval pathways
C Coat protein complex I (COP-I)
D VFPPC_08216 coatomer alpha subunit K05236 COPA; coatomer subunit alpha
D VFPPC_05464 coatomer beta subunit K17301 COPB1; coatomer subunit beta
D VFPPC_14246 coatomer beta' subunit K17302 COPB2; coatomer subunit beta'
D VFPPC_04851 coatomer subunit gamma K17267 COPG; coatomer subunit gamma
D VFPPC_04449 coatomer subunit delta K20471 COPD; coatomer subunit delta
D VFPPC_07241 coatomer subunit epsilon K17268 COPE; coatomer subunit epsilon
D VFPPC_15124 coatomer zeta subunit K20472 COPZ; coatomer subunit zeta
C NRZ (DSL1) complex
D VFPPC_08070 RINT-1 family protein K20474 RINT1; RAD50-interacting protein 1
D VFPPC_06156 centromere kinetochore protein K11578 ZW10; protein transport protein DSL1/ZW10
D VFPPC_04527 protein transport protein Sec39 K20475 SEC39; protein transport protein SEC39
C Golgi to ER traffic proteins (GET)
D VFPPC_03407 CHD5 domain-containing protein K22384 GET1; tail-anchored protein insertion receptor
D VFPPC_00764 GET complex, subunit GET2 K22386 GET2; GET complex subunit GET2
D VFPPC_03072 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D VFPPC_05727 hypothetical protein K23387 GET4; golgi to ER traffic protein 4
D VFPPC_12884 ubiquitin supergroup K23388 UBL4; ubiquitin-like protein 4
C Rab GTPases
C Rab associated proteins
D VFPPC_05559 hypothetical protein K20476 RIC1; RAB6A-GEF complex partner protein 1
D VFPPC_02062 intracellular protein transport protein (Sat1) K20477 RGP1; RAB6A-GEF complex partner protein 2
D VFPPC_14952 HDEL sequence binding protein K10949 KDELR; ER lumen protein retaining receptor
D VFPPC_00135 GTPase-activating protein GYP1 K20360 TBC1D22; TBC1 domain family member 2
B Others
C Oxysterol-binding proteins
D VFPPC_08588 oxysterol-binding protein K20456 OSBP; oxysterol-binding protein 1
D VFPPC_14627 oxysterol-binding protein K20463 OSBPL3_6_7; oxysterol-binding protein-related protein 3/6/7
D VFPPC_02983 oxysterol binding protein (Osh7) K22285 OSBPL8; oxysterol-binding protein-related protein 8
D VFPPC_08037 oxysterol-binding protein K20465 OSBPL9_10_11; oxysterol-binding protein-related protein 9/10/11
D VFPPC_13840 oxysterol binding protein K20465 OSBPL9_10_11; oxysterol-binding protein-related protein 9/10/11
C FXYD proteins
C YIPF proteins
D VFPPC_13486 Yip1 domain family K22940 YIPF1_2; protein YIPF1/2
D VFPPC_01343 golgi membrane protein K20363 YIPF5_7; protein YIPF5/7
D VFPPC_03532 Yip1 domain-containing protein K22943 YIPF6; protein YIPF6
C ER membrane protein complex
D VFPPC_10030 hypothetical protein K23562 EMC1; ER membrane protein complex subunit 1
D VFPPC_09809 tetratricopeptide repeat domain-containing protein K23563 EMC2; ER membrane protein complex subunit 2
D VFPPC_13598 hypothetical protein K23564 EMC3; ER membrane protein complex subunit 3
D VFPPC_17638 hypothetical protein K23565 EMC4; ER membrane protein complex subunit 4
D VFPPC_18662 hypothetical protein K23568 EMC7; ER membrane protein complex subunit 7
C SEC61 complex
D VFPPC_17916 protein transport protein SEC61 alpha subunit K10956 SEC61A; protein transport protein SEC61 subunit alpha
D VFPPC_18748 sec61beta family domain-containing protein K09481 SEC61B; protein transport protein SEC61 subunit beta
D VFPPC_14867 SecE/Sec61-gamma subunits of protein translocation complex domain-containing protein K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
C TRAP complex
C Multi-pass translocon (MPT) complex
D VFPPC_02809 hypothetical protein K24962 CCDC47; PAT complex subunit CCDC47
C Post-GPI attachment to proteins factors (PGAP)
D VFPPC_03520 GPI inositol-deacylase K05294 PGAP1; GPI inositol-deacylase [EC:3.-.-.-]
D VFPPC_15199 Mn2+ homeostasis protein Per1 K23553 PGAP3; post-GPI attachment to proteins factor 3
D VFPPC_08910 cell division control protein K23362 MPPE1; ethanolamine phosphate phosphodiesterase [EC:3.1.-.-]
C Others
D VFPPC_09456 golgi transport protein Sly1 K19998 SCFD1; sec1 family domain-containing protein 1
D VFPPC_14260 endoplasmic reticulum protein K20724 TMEM33; transmembrane protein 33
D VFPPC_02253 arv1-like family protein K21848 ARV1; lipid intermediate transporter
D VFPPC_08132 vacuolar protein sorting-associated protein 74 K15620 GOLPH3; golgi phosphoprotein 3
D VFPPC_13623 INSIG domain-containing protein K26681 INSIG; insulin-induced protein
D VFPPC_14525 Got1 family protein K26683 GOLT1; vesicle transport protein GOT1
D VFPPC_13805 protein sey1 K22698 SEY1; protein SEY1 [EC:3.6.5.-]
#
AAutophagy
B Autophagosome formation proteins
C ULK complex
D VFPPC_01394 autophagy protein Atg13 K08331 ATG13; autophagy-related protein 13
D VFPPC_13353 hypothetical protein K19730 ATG101; autophagy-related protein 101
C Atg1 complex
D VFPPC_04383 serine/threonine protein kinase (Pdd7p) K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1]
D VFPPC_01394 autophagy protein Atg13 K08331 ATG13; autophagy-related protein 13
D VFPPC_13290 kinase activator (Atg17) K08329 ATG17; autophagy-related protein 17
C PI3K complex
D VFPPC_04678 phosphoinositide 3-kinase K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
D VFPPC_03596 VPS15 protein kinase K08333 PIK3R4; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
D VFPPC_16090 beclin-1 K08334 BECN; beclin
C ATG9 transmembrane protein
D VFPPC_08183 autophagy protein Apg9 K17907 ATG9; autophagy-related protein 9
C Atg18-Atg2 complex
D VFPPC_03501 protein-vacuolar targeting protein Atg18 K17908 WIPI1_2; autophagy-related protein 18
D VFPPC_09414 autophagy regulatory protein Atg2 K17906 ATG2; autophagy-related protein 2
C Atg12 conjugation proteins
D VFPPC_01622 ubiquitin-like autophagy protein Apg12 K08336 ATG12; ubiquitin-like protein ATG12
D VFPPC_09546 autophagy ubiquitin-activating enzyme ApgG K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7
D VFPPC_12795 autophagy-related protein 10 K17888 ATG10L; ubiquitin-like-conjugating enzyme ATG10
D VFPPC_14199 autophagy protein 5 K08339 ATG5; autophagy-related protein 5
C Atg8 conjugation proteins
D VFPPC_12995 ubiquitin domain of GABA-receptor-associated protein K08341 GABARAP; GABA(A) receptor-associated protein
D VFPPC_14355 cysteine protease ATG4 K08342 ATG4; cysteine protease ATG4 [EC:3.4.22.-]
D VFPPC_09546 autophagy ubiquitin-activating enzyme ApgG K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7
D VFPPC_04584 autophagy-like protein 3 K08343 ATG3; ubiquitin-like-conjugating enzyme ATG3
B Cytoplasm to vacuolar targeting (CVT) pathway
C Selective cargos
D VFPPC_05959 aspartyl aminopeptidase K01268 LAP4; aminopeptidase I [EC:3.4.11.22]
D VFPPC_03020 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D VFPPC_15531 aspartyl aminopeptidase K01267 DNPEP; aspartyl aminopeptidase [EC:3.4.11.21]
C Cargo receptors
C Scaffold protein
D VFPPC_00285 Taz1-interacting factor 1 K08330 ATG11; autophagy-related protein 11
C Other Cvt associated proteins
D VFPPC_02897 sorting nexin-41 K21996 SNX41_42; sorting nexin-41/42
D VFPPC_08790 sorting nexin-4 K17919 SNX4; sorting nexin-4
D VFPPC_07055 autophagy related lipase Atg15 K17900 ATG15; lipase ATG15 [EC:3.1.1.3]
D VFPPC_02104 autophagy-related protein 27 K21141 ATG27; autophagy-related protein 27
D VFPPC_14053 vacuolar protein 8 K08332 VAC8; vacuolar protein 8
B Mitophagy
C Cargo receptors
C Scaffold proteins
D VFPPC_00285 Taz1-interacting factor 1 K08330 ATG11; autophagy-related protein 11
C PINK1-Parkin associated proteins
D VFPPC_02859 transmembrane GTPase Fzo1 K06030 MFN2; mitofusin 2 [EC:3.6.5.-]
D VFPPC_03143 ZZ type zinc finger domain-containing protein K17987 NBR1; next to BRCA1 gene 1 protein
C Other mitophagy associated proteins
D VFPPC_08523 glucokinase K00844 HK; hexokinase [EC:2.7.1.1]
D VFPPC_10849 glucokinase K00844 HK; hexokinase [EC:2.7.1.1]
D VFPPC_14971 glucokinase K00844 HK; hexokinase [EC:2.7.1.1]
D VFPPC_15123 hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D VFPPC_01459 hexokinase-1 K00844 HK; hexokinase [EC:2.7.1.1]
D VFPPC_13375 ATPase inhibitor, IATP, mitochondria K22255 ATPIF1; ATPase inhibitor, mitochondrial
D VFPPC_15140 hypothetical protein K19717 ATG33; autophagy-related protein 33
B Pexophagy
C Selective cargos
D VFPPC_02905 peroxisomal biogenesis factor 3 K13336 PEX3; peroxin-3
D VFPPC_01689 peroxisomal membrane anchor protein (Pex14) K13343 PEX14; peroxin-14
C Cargo receptors
C Other pexophagy associated proteins
D VFPPC_03143 ZZ type zinc finger domain-containing protein K17987 NBR1; next to BRCA1 gene 1 protein
D VFPPC_13385 peroxisome biosynthesis protein K13338 PEX1; peroxin-1
D VFPPC_04265 peroxisomal biogenesis factor 6 K13339 PEX6; peroxin-6
B Aggrephagy
C Cargo receptors
D VFPPC_03143 ZZ type zinc finger domain-containing protein K17987 NBR1; next to BRCA1 gene 1 protein
C Scaffold proteins
C Other aggrephagy associated proteins
D VFPPC_04361 cell division cycle protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase
D VFPPC_03476 histone deacetylase clr3 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
D VFPPC_04979 CHIP protein (carboxyl terminus of Hsc70-interacting protein) K09561 STUB1; STIP1 homology and U-box containing protein 1 [EC:2.3.2.27]
B Xenophagy
C Cargo receptors
D VFPPC_03143 ZZ type zinc finger domain-containing protein K17987 NBR1; next to BRCA1 gene 1 protein
C Other xenophagy associated proteins
B Chaperone mediated autophagy (CMA)
C Selective cargos
D VFPPC_05231 aspartate aminotransferase, cytoplasmic K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1]
D VFPPC_00755 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VFPPC_09763 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VFPPC_13671 deubiquitination-protection protein dph1 K04523 UBQLN; ubiquilin
C Cargo receptors
C Chaperones
D VFPPC_05285 heat shock protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D VFPPC_08362 heat shock protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D VFPPC_07934 heat shock protein 82 K04079 HSP90A; molecular chaperone HtpG
C Co-chaperones
C Other CMA associated proteins
D VFPPC_04839 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D VFPPC_07015 carboxypeptidase Y precursor K13289 CTSA; cathepsin A (carboxypeptidase C) [EC:3.4.16.5]
D VFPPC_07181 carboxypeptidase Y precursor K13289 CTSA; cathepsin A (carboxypeptidase C) [EC:3.4.16.5]
D VFPPC_12520 serine carboxypeptidase K13289 CTSA; cathepsin A (carboxypeptidase C) [EC:3.4.16.5]
D VFPPC_18483 serine carboxypeptidase K13289 CTSA; cathepsin A (carboxypeptidase C) [EC:3.4.16.5]
D VFPPC_02945 carboxypeptidase Y precursor K13289 CTSA; cathepsin A (carboxypeptidase C) [EC:3.4.16.5]
B Other autophagy associated proteins
C RNautophagy/DNautophagy
C Micronucleophagy
D VFPPC_14053 vacuolar protein 8 K08332 VAC8; vacuolar protein 8
C Midbophagy
D VFPPC_03143 ZZ type zinc finger domain-containing protein K17987 NBR1; next to BRCA1 gene 1 protein
C Glycophagy
C TRIM-directed selective autophagy
C ER-mitochondria tethering complex
D VFPPC_02859 transmembrane GTPase Fzo1 K06030 MFN2; mitofusin 2 [EC:3.6.5.-]
C mTORC1 complex
D VFPPC_01262 phosphatidylinositol 3-kinase tor2 K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1]
D VFPPC_03118 WD-repeat protein pop3 K08266 MLST8; target of rapamycin complex subunit LST8
D VFPPC_04749 WD-repeat protein mip1 K07204 RAPTOR; regulatory associated protein of mTOR
C mTORC2 complex
D VFPPC_01262 phosphatidylinositol 3-kinase tor2 K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1]
D VFPPC_03118 WD-repeat protein pop3 K08266 MLST8; target of rapamycin complex subunit LST8
D VFPPC_04432 stress activated MAP kinase interacting protein Sin1 K20410 MAPKAP1; target of rapamycin complex 2 subunit MAPKAP1/AVO1
D VFPPC_08237 cytosolic regulator Pianissimo K08267 RICTOR; rapamycin-insensitive companion of mTOR
C SEACIT/GATOR1 complex
D VFPPC_17648 Dishevelled, Egl-10, and Pleckstrin domain-containing protein K20404 DEPDC5; SEA/GATOR complex protein SEA1/DEPDC5
D VFPPC_04612 tumor suppressor candidate 4 K20405 NPRL2; nitrogen permease regulator 2
C SEACAT/GATOR2 complex
D VFPPC_08756 WD repeat protein K20408 WDR24; SEA/GATOR complex protein SEA2/WDR24
D VFPPC_08532 WD repeat protein K20409 WDR59; SEA/GATOR complex protein SEA3/WDR59
D VFPPC_02866 WD repeat-containing protein K20407 MIOS; SEA/GATOR complex protein SEA4/MIOS
D VFPPC_05120 nuclear pore complex subunit K14299 SEH1; nucleoporin SEH1
D VFPPC_01680 protein transporter sec-13 K14004 SEC13; protein transport protein SEC13
C KICSTOR complex
C Rab GTPases
D VFPPC_05086 RAB/GTPase K07901 RAB8A; Ras-related protein Rab-8A
C Rab associated proteins
C Others
D VFPPC_14528 serine/threonine-protein phosphatase PP2A catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
D VFPPC_09064 TOR signaling pathway regulator (TapA) K17606 IGBP1; immunoglobulin-binding protein 1
D VFPPC_08754 UV radiation resistance protein K21249 UVRAG; UV radiation resistance-associated gene protein
D VFPPC_09177 MFS transporter family protein K06902 UMF1; MFS transporter, UMF1 family
D VFPPC_06084 amino acid transporter K14209 SLC36A; solute carrier family 36 (proton-coupled amino acid transporter)
D VFPPC_01112 amino acid transporter K14209 SLC36A; solute carrier family 36 (proton-coupled amino acid transporter)
D VFPPC_14720 phosphatidylinositol 3,5-bisphosphate-binding protein K22991 WDR45; WD repeat-containing protein 45
D VFPPC_13866 VMA21-like domain-containing protein K23952 VMA21; vacuolar ATPase assembly integral membrane protein VMA21
D VFPPC_08475 hypothetical protein K27411 PHAF1; phagosome assembly factor 1
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AOthers
B NADPH oxidases (Nox) and associated proteins
C NADPH oxidases
D VFPPC_08299 NADPH oxidase K08008 NOX1; NADPH oxidase 1
D VFPPC_07750 NADPH oxidase isoform 2 K21421 NOX2; NADPH oxidase 2 [EC:1.-.-.-]
D VFPPC_03673 Ferredoxin reductase-like, C-terminal NADP-linked K21421 NOX2; NADPH oxidase 2 [EC:1.-.-.-]
C Nox associated proteins
D VFPPC_04885 rho GTPase K04392 RAC1; Ras-related C3 botulinum toxin substrate 1
B Actin-binding proteins
C Myosins
D VFPPC_01135 myosin-1 K10356 MYO1; myosin I
D VFPPC_09779 class V myosin K10357 MYO5; myosin V
C Arp2/3 complex
D VFPPC_00493 ARP2/3 actin-organizing complex subunit Sop2 K05757 ARPC1A_B; actin related protein 2/3 complex, subunit 1A/1B
D VFPPC_15088 ARP2/3 complex K05758 ARPC2; actin related protein 2/3 complex, subunit 2
D VFPPC_13266 ARP2/3 complex K05756 ARPC3; actin related protein 2/3 complex, subunit 3
D VFPPC_06750 ARP2/3 complex K05755 ARPC4; actin related protein 2/3 complex, subunit 4
D VFPPC_05270 ARP2/3 complex (p16-Arc) K05754 ARPC5; actin related protein 2/3 complex, subunit 5
D VFPPC_09288 Arp2/3 complex subunit (Arp2) K17260 ACTR2; actin-related protein 2
D VFPPC_12975 actin K18584 ACTR3; actin-related protein 3
C Nucleation-promoting factors (NPFs)
D VFPPC_04796 EVH1 protein K23612 WASL; neural Wiskott-Aldrich syndrome protein
D VFPPC_05524 actin binding protein K20520 DBNL; drebrin-like protein
D VFPPC_02903 hypothetical protein K20047 PAN1; actin cytoskeleton-regulatory complex protein PAN1
D VFPPC_03085 reduced viability upon starvation protein K12562 AMPH; amphiphysin
D VFPPC_05473 cytoskeleton assembly control protein Sla1 K20046 SLA1; actin cytoskeleton-regulatory complex protein SLA1
D VFPPC_07665 SH3 domain-containing protein K20521 BBC1; myosin tail region-interacting protein MTI1
D VFPPC_15864 SH3 domain-containing protein K20522 LSB1_2; LAS seventeen-binding protein 1/2
D VFPPC_07905 hypothetical protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
D VFPPC_01582 SH3 domain-containing protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
D VFPPC_01467 VHS domain-containing protein K20524 LSB5; LAS seventeen-binding protein 5
D VFPPC_05096 phosphatidylinositol 4-kinase type II subunit alpha K13711 PI4K2; phosphatidylinositol 4-kinase type 2 [EC:2.7.1.67]
C Others
D VFPPC_14524 profilin K05759 PFN; profilin
D VFPPC_03513 adenylyl cyclase-associated protein K17261 CAP1_2; adenylyl cyclase-associated protein
D VFPPC_05246 kinesin heavy chain K10396 KIF5; kinesin family member 5
D VFPPC_02851 calponin K20526 TAGLN; transgelin
B Mucins
C Membrane bound mucins
C Secretory mucins
B Rab GTPases of specific organelles
C Melanosome
C Auto phagosome
C Lipid droplets
C Mitochondrion
B Rho GTPase associated proteins
C Rho GTPase-activating proteins
D VFPPC_04817 Rho GTPase activator (Rgd1) K20643 RGD1; Rho GTPase-activating protein RGD1
D VFPPC_00627 RhoGAP domain-containing protein K08773 RALBP1; RalA-binding protein 1
C Rho guanine nucleotide exchange factors (GEFs)
D VFPPC_00586 Rho guanyl nucleotide exchange factor K20705 DNMBP; dynamin-binding protein
D VFPPC_00968 SH3 domain-containing protein K05727 DOCK3; dedicator of cytokinesis protein 3
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024