+F Repair protein KO #

  DNA Repair and Recombination Proteins - Phanerochaete carnosa

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D PHACADRAFT_158212 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E PHACADRAFT_252061 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E PHACADRAFT_203182 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] E PHACADRAFT_259229 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] E PHACADRAFT_203552 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] E PHACADRAFT_266509 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] E PHACADRAFT_92514 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E PHACADRAFT_96257 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] E PHACADRAFT_162146 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] E PHACADRAFT_251498 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E PHACADRAFT_120160 hypothetical protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] E PHACADRAFT_153651 hypothetical protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2] D Long Patch-BER factors E DNA polymerase delta complex F PHACADRAFT_104509 hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] F PHACADRAFT_173871 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2 F PHACADRAFT_264153 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4 E DNA polymerase epsilon complex F PHACADRAFT_99155 hypothetical protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] F PHACADRAFT_181204 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] F PHACADRAFT_262974 hypothetical protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] E PHACADRAFT_253458 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen E PHACADRAFT_88937 hypothetical protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E PHACADRAFT_102664 hypothetical protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E PHACADRAFT_204217 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Short Patch-BER factors D Other BER factors E PHACADRAFT_148739 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] E PHACADRAFT_246186 hypothetical protein K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30] C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex F PHACADRAFT_177064 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein F PHACADRAFT_258558 hypothetical protein K10839 RAD23; UV excision repair protein RAD23 E Cul4-DDB2 complex F PHACADRAFT_253837 hypothetical protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F PHACADRAFT_167952 hypothetical protein K10609 CUL4; cullin 4 F PHACADRAFT_214459 hypothetical protein K10609 CUL4; cullin 4 F PHACADRAFT_181065 hypothetical protein K10610 DDB1; DNA damage-binding protein 1 E NER4 complex F PHACADRAFT_259073 hypothetical protein K15082 RAD7; DNA repair protein RAD7 F PHACADRAFT_114435 hypothetical protein K15083 RAD16; DNA repair protein RAD16 D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex F PHACADRAFT_246551 hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] F PHACADRAFT_247866 hypothetical protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] F PHACADRAFT_258319 hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 F PHACADRAFT_105721 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 F PHACADRAFT_251606 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 F PHACADRAFT_175251 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 F PHACADRAFT_152837 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 F PHACADRAFT_160812 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 F PHACADRAFT_212353 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 F PHACADRAFT_251231 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 E Cul4-CSA complex F PHACADRAFT_253837 hypothetical protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F PHACADRAFT_167952 hypothetical protein K10609 CUL4; cullin 4 F PHACADRAFT_214459 hypothetical protein K10609 CUL4; cullin 4 F PHACADRAFT_181065 hypothetical protein K10610 DDB1; DNA damage-binding protein 1 E Other TCR factor F PHACADRAFT_71199 hypothetical protein K25829 ELOF1; transcription elongation factor 1 D TFIIH complex E PHACADRAFT_252066 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E PHACADRAFT_256068 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E PHACADRAFT_185111 hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 E PHACADRAFT_258371 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E PHACADRAFT_171015 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E PHACADRAFT_210756 hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit E PHACADRAFT_153133 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E PHACADRAFT_84769 hypothetical protein K06634 CCNH; cyclin H D RPA (replication factor A) E PHACADRAFT_255854 hypothetical protein K07466 RFA1; replication factor A1 E PHACADRAFT_173451 hypothetical protein K10739 RFA2; replication factor A2 E PHACADRAFT_28352 hypothetical protein K10740 RPA3; replication factor A3 E PHACADRAFT_246128 hypothetical protein K10740 RPA3; replication factor A3 D Other NER factors E PHACADRAFT_204003 hypothetical protein K10847 XPA; DNA-repair protein complementing XP-A cells E PHACADRAFT_174878 hypothetical protein K10849 ERCC1; DNA excision repair protein ERCC-1 E PHACADRAFT_149022 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] E PHACADRAFT_193460 hypothetical protein K10846 ERCC5; DNA excision repair protein ERCC-5 E PHACADRAFT_204217 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E PHACADRAFT_178404 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19 E PHACADRAFT_252641 hypothetical protein K03869 CUL3; cullin 3 E PHACADRAFT_167536 hypothetical protein K03872 ELOC; elongin-C E PHACADRAFT_183904 hypothetical protein K15077 ELA1; elongin-A C MMR (mismatch excision repair) D Mismatch and loop recognition factors E PHACADRAFT_207767 hypothetical protein K08735 MSH2; DNA mismatch repair protein MSH2 E PHACADRAFT_96015 hypothetical protein K08736 MSH3; DNA mismatch repair protein MSH3 E PHACADRAFT_116507 hypothetical protein K08737 MSH6; DNA mismatch repair protein MSH6 D MutL homologs E PHACADRAFT_119030 hypothetical protein K08734 MLH1; DNA mismatch repair protein MLH1 E PHACADRAFT_260955 hypothetical protein K10858 PMS2; DNA mismatch repair protein PMS2 E PHACADRAFT_205965 hypothetical protein K08739 MLH3; DNA mismatch repair protein MLH3 D DNA polymerase delta complex E PHACADRAFT_104509 hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] E PHACADRAFT_173871 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2 E PHACADRAFT_264153 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4 D RPA (replication factor A) E PHACADRAFT_255854 hypothetical protein K07466 RFA1; replication factor A1 E PHACADRAFT_173451 hypothetical protein K10739 RFA2; replication factor A2 E PHACADRAFT_28352 hypothetical protein K10740 RPA3; replication factor A3 E PHACADRAFT_246128 hypothetical protein K10740 RPA3; replication factor A3 D RFC (replication factor C) E PHACADRAFT_157248 hypothetical protein K10754 RFC1; replication factor C subunit 1 E PHACADRAFT_111883 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 E PHACADRAFT_144345 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 E PHACADRAFT_152803 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 E PHACADRAFT_171504 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 D Other MMR factors E PHACADRAFT_253458 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen E PHACADRAFT_90326 hypothetical protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-] E PHACADRAFT_204217 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E PHACADRAFT_208996 hypothetical protein K24755 WDR76; WD repeat-containing protein 76 B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex E PHACADRAFT_207913 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11 D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex E PHACADRAFT_207913 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11 D BRCA complex E PHACADRAFT_248310 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein D RecA family proteins E PHACADRAFT_91096 hypothetical protein K10871 RAD51L3; RAD51-like protein 3 D Rad52 family proteins E PHACADRAFT_90029 hypothetical protein K10873 RAD52; DNA repair and recombination protein RAD52 D Rad54 family proteins E PHACADRAFT_173301 hypothetical protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] E PHACADRAFT_29344 hypothetical protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-] D RecQ family DNA helicases E PHACADRAFT_27241 hypothetical protein K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4] D Bloom's syndrome complex (BTR) E PHACADRAFT_97897 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] E PHACADRAFT_193408 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1 D RPA (replication factor A) E PHACADRAFT_255854 hypothetical protein K07466 RFA1; replication factor A1 E PHACADRAFT_173451 hypothetical protein K10739 RFA2; replication factor A2 E PHACADRAFT_28352 hypothetical protein K10740 RPA3; replication factor A3 E PHACADRAFT_246128 hypothetical protein K10740 RPA3; replication factor A3 D Protein phosphatase 4 E PHACADRAFT_251005 hypothetical protein K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16] E PHACADRAFT_184278 hypothetical protein K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1 E PHACADRAFT_161613 hypothetical protein K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2 E PHACADRAFT_250812 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3 D AP-5 complex D SMC5-SMC6 complex E PHACADRAFT_181841 hypothetical protein K22803 SMC5; structural maintenance of chromosomes protein 5 E PHACADRAFT_102496 hypothetical protein K22804 SMC6; structural maintenance of chromosomes protein 6 E PHACADRAFT_265043 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] E PHACADRAFT_32294 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4 D Other HR factors E PHACADRAFT_266254 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 E PHACADRAFT_172822 hypothetical protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-] E PHACADRAFT_149458 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] E PHACADRAFT_185071 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] E PHACADRAFT_102885 hypothetical protein K11339 MORF4L1; mortality factor 4-like protein 1 E PHACADRAFT_249122 hypothetical protein K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E PHACADRAFT_209630 hypothetical protein K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7 E PHACADRAFT_247978 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] E PHACADRAFT_117246 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] E PHACADRAFT_125288 hypothetical protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4] C NHEJ (non-homologous end-joining) D DNA-PK complex E PHACADRAFT_116276 hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1 E PHACADRAFT_82428 hypothetical protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2 D MRX complex E PHACADRAFT_207913 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11 D DNA Ligase 4 complex E PHACADRAFT_178599 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] E PHACADRAFT_178551 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] D X-family DNA polymerases E PHACADRAFT_30808 hypothetical protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7] E PHACADRAFT_176005 hypothetical protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7] D Other NHEJ factors E PHACADRAFT_54509 hypothetical protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-] E PHACADRAFT_252530 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-] C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) E PHACADRAFT_97897 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] E PHACADRAFT_193408 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1 D FANCD2-I complex D Downstream FA components E PHACADRAFT_248310 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein D Other FA pathway factors E PHACADRAFT_195070 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1] E PHACADRAFT_121551 hypothetical protein K11137 TELO2; telomere length regulation protein E PHACADRAFT_83158 hypothetical protein K15361 WDR48; WD repeat-containing protein 48 C Other DSBR factors D Protein phosphatase 6 E PHACADRAFT_261428 hypothetical protein K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16] D Ubiquitin ligases D Others E PHACADRAFT_211560 hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1 E PHACADRAFT_247107 hypothetical protein K24752 WDR70; WD repeat-containing protein 70 E PHACADRAFT_208996 hypothetical protein K24755 WDR76; WD repeat-containing protein 76 B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D PHACADRAFT_140428 hypothetical protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7] D PHACADRAFT_145933 hypothetical protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7] D PHACADRAFT_174265 hypothetical protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-] C B-family DNA polymerases D PHACADRAFT_204189 hypothetical protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7] C A-family DNA polymerase C Rad6 epistasis group D PHACADRAFT_253383 hypothetical protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D PHACADRAFT_209467 hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27] D PHACADRAFT_111980 hypothetical protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-] D PHACADRAFT_197015 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27] D PHACADRAFT_247815 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27] D PHACADRAFT_264835 hypothetical protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant D PHACADRAFT_266419 hypothetical protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] D PHACADRAFT_265741 hypothetical protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] C Other TLS factors D PHACADRAFT_253458 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen D PHACADRAFT_203857 hypothetical protein K26957 GCNA; germ cell nuclear acidic protein B Check point factors C Rad9-Hus1-Rad1 complex D PHACADRAFT_264515 hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2] D PHACADRAFT_90692 hypothetical protein K10903 HUS1; HUS1 checkpoint protein D PHACADRAFT_209489 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C HRAD17(Rad24)-RFC complex D PHACADRAFT_185902 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein D PHACADRAFT_111883 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 D PHACADRAFT_144345 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 D PHACADRAFT_152803 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 D PHACADRAFT_171504 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 C Rad17-Mec3-Ddc1 complex D PHACADRAFT_209489 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C FPC (fork protection complex) D PHACADRAFT_142335 hypothetical protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1 D PHACADRAFT_173471 hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3 C Triple T complex D PHACADRAFT_121551 hypothetical protein K11137 TELO2; telomere length regulation protein D PHACADRAFT_134689 hypothetical protein K20403 TTI1; TELO2-interacting protein 1 C BAG6-UBL4A-GET4 complex D PHACADRAFT_170838 hypothetical protein K23388 UBL4; ubiquitin-like protein 4 D PHACADRAFT_171018 hypothetical protein K23387 GET4; golgi to ER traffic protein 4 C Other check point factors D PHACADRAFT_181804 hypothetical protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] D PHACADRAFT_153321 hypothetical protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D PHACADRAFT_175408 hypothetical protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] D PHACADRAFT_256826 hypothetical protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48] D PHACADRAFT_250466 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon D PHACADRAFT_181760 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon D PHACADRAFT_259022 hypothetical protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D PHACADRAFT_203428 hypothetical protein K20780 MDC1; mediator of DNA damage checkpoint protein 1 D PHACADRAFT_122634 hypothetical protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1] D PHACADRAFT_246626 hypothetical protein K12196 VPS4; vacuolar protein-sorting-associated protein 4 D PHACADRAFT_252831 hypothetical protein K25059 SDE2; replication stress response regulator SDE2 B Other factors with a suspected DNA repair function C DNA polymerases D PHACADRAFT_256841 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7] C Nucleases D PHACADRAFT_166360 hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein D PHACADRAFT_248200 hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-] D PHACADRAFT_131239 hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1] D PHACADRAFT_155682 hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1] D PHACADRAFT_183223 hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1] C Helicases D PHACADRAFT_261138 hypothetical protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-] C PSO4 complex D PHACADRAFT_133570 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D PHACADRAFT_28828 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D PHACADRAFT_247062 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27 D PHACADRAFT_263049 hypothetical protein K12862 PLRG1; pleiotropic regulator 1 C Modulation of nucleotide pools D PHACADRAFT_187006 hypothetical protein K17816 NUDT1; 8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase [EC:3.6.1.55 3.6.1.56] D PHACADRAFT_258889 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PHACADRAFT_93367 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PHACADRAFT_137229 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PHACADRAFT_202842 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PHACADRAFT_261748 hypothetical protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D PHACADRAFT_249825 hypothetical protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] D PHACADRAFT_249824 hypothetical protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D PHACADRAFT_158212 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E PHACADRAFT_252061 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E PHACADRAFT_210092 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E PHACADRAFT_92514 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E PHACADRAFT_203883 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E PHACADRAFT_162146 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] E PHACADRAFT_251498 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D RecJ D DNA ligase D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors E PHACADRAFT_193443 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) E TRCF (transcription-repair coupling factor) C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme D DNA ligase D Other MMR factors E PHACADRAFT_193443 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins D RecFOR pathway proteins D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway E Facilitator E Supressor B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C Other SOS response factors B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases C Modulation of nucleotide pools D PHACADRAFT_258889 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PHACADRAFT_93367 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PHACADRAFT_137229 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PHACADRAFT_202842 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 19, 2024